Multiple sequence alignment - TraesCS4A01G095400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G095400 chr4A 100.000 3404 0 0 1 3404 103720738 103724141 0.000000e+00 6287.0
1 TraesCS4A01G095400 chr4A 78.759 532 96 13 336 853 691505958 691505430 1.170000e-89 340.0
2 TraesCS4A01G095400 chr4D 95.799 1452 60 1 983 2434 360957864 360956414 0.000000e+00 2342.0
3 TraesCS4A01G095400 chr4D 84.217 849 109 14 3 841 360959458 360958625 0.000000e+00 802.0
4 TraesCS4A01G095400 chr4D 94.380 516 17 8 2891 3404 360956423 360955918 0.000000e+00 782.0
5 TraesCS4A01G095400 chr4B 95.989 1446 51 3 983 2428 446329813 446331251 0.000000e+00 2342.0
6 TraesCS4A01G095400 chr4B 91.667 516 19 9 2891 3404 446331248 446331741 0.000000e+00 693.0
7 TraesCS4A01G095400 chr2B 92.766 470 32 2 2425 2894 184495570 184496037 0.000000e+00 678.0
8 TraesCS4A01G095400 chr2B 90.764 314 20 2 2587 2892 797417773 797418085 8.790000e-111 411.0
9 TraesCS4A01G095400 chr2B 80.040 506 87 11 348 841 421079851 421080354 2.500000e-96 363.0
10 TraesCS4A01G095400 chr2B 89.394 66 6 1 913 977 636544761 636544826 7.830000e-12 82.4
11 TraesCS4A01G095400 chr5A 95.294 425 20 0 2450 2874 375570798 375570374 0.000000e+00 675.0
12 TraesCS4A01G095400 chr5A 93.111 450 29 2 2426 2874 115244355 115243907 0.000000e+00 658.0
13 TraesCS4A01G095400 chr5A 93.289 447 27 3 2430 2874 651996306 651995861 0.000000e+00 656.0
14 TraesCS4A01G095400 chr5A 88.235 68 7 1 914 980 591437104 591437037 2.820000e-11 80.5
15 TraesCS4A01G095400 chr3A 93.933 445 27 0 2430 2874 479153056 479153500 0.000000e+00 673.0
16 TraesCS4A01G095400 chr5B 93.736 447 25 2 2430 2874 69813730 69814175 0.000000e+00 667.0
17 TraesCS4A01G095400 chr2A 93.708 445 27 1 2430 2874 78557330 78557773 0.000000e+00 665.0
18 TraesCS4A01G095400 chr2A 92.905 451 32 0 2444 2894 278444711 278445161 0.000000e+00 656.0
19 TraesCS4A01G095400 chr6A 92.144 471 29 2 2430 2892 602293047 602293517 0.000000e+00 658.0
20 TraesCS4A01G095400 chr6B 80.806 521 87 10 332 841 698091907 698092425 2.460000e-106 396.0
21 TraesCS4A01G095400 chr6B 80.357 504 85 10 350 841 678532986 678533487 1.490000e-98 370.0
22 TraesCS4A01G095400 chr7B 80.198 505 85 12 350 841 707963151 707963653 6.940000e-97 364.0
23 TraesCS4A01G095400 chr2D 80.000 505 84 13 350 841 575827131 575827631 1.160000e-94 357.0
24 TraesCS4A01G095400 chr3B 79.604 505 89 11 349 841 127853847 127854349 1.940000e-92 350.0
25 TraesCS4A01G095400 chr3B 79.191 519 91 13 348 853 825014255 825013741 9.040000e-91 344.0
26 TraesCS4A01G095400 chr1A 88.406 69 7 1 913 980 219150311 219150243 7.830000e-12 82.4
27 TraesCS4A01G095400 chr1A 95.122 41 0 2 880 918 438341216 438341256 2.840000e-06 63.9
28 TraesCS4A01G095400 chr1A 92.683 41 1 2 880 918 197137368 197137408 1.320000e-04 58.4
29 TraesCS4A01G095400 chr1B 95.122 41 0 2 880 918 205539159 205539199 2.840000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G095400 chr4A 103720738 103724141 3403 False 6287.000000 6287 100.000000 1 3404 1 chr4A.!!$F1 3403
1 TraesCS4A01G095400 chr4A 691505430 691505958 528 True 340.000000 340 78.759000 336 853 1 chr4A.!!$R1 517
2 TraesCS4A01G095400 chr4D 360955918 360959458 3540 True 1308.666667 2342 91.465333 3 3404 3 chr4D.!!$R1 3401
3 TraesCS4A01G095400 chr4B 446329813 446331741 1928 False 1517.500000 2342 93.828000 983 3404 2 chr4B.!!$F1 2421
4 TraesCS4A01G095400 chr2B 421079851 421080354 503 False 363.000000 363 80.040000 348 841 1 chr2B.!!$F2 493
5 TraesCS4A01G095400 chr6B 698091907 698092425 518 False 396.000000 396 80.806000 332 841 1 chr6B.!!$F2 509
6 TraesCS4A01G095400 chr6B 678532986 678533487 501 False 370.000000 370 80.357000 350 841 1 chr6B.!!$F1 491
7 TraesCS4A01G095400 chr7B 707963151 707963653 502 False 364.000000 364 80.198000 350 841 1 chr7B.!!$F1 491
8 TraesCS4A01G095400 chr2D 575827131 575827631 500 False 357.000000 357 80.000000 350 841 1 chr2D.!!$F1 491
9 TraesCS4A01G095400 chr3B 127853847 127854349 502 False 350.000000 350 79.604000 349 841 1 chr3B.!!$F1 492
10 TraesCS4A01G095400 chr3B 825013741 825014255 514 True 344.000000 344 79.191000 348 853 1 chr3B.!!$R1 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
904 1645 0.035439 TTCGGAATTCCACCAGCTCC 60.035 55.0 24.09 0.0 35.14 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2716 3457 0.11358 GGGTTGGGGAGCAAAACCTA 59.886 55.0 4.0 0.0 42.5 3.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 1.264288 GGGATAAGCGAAATCGGCAAG 59.736 52.381 4.84 0.00 40.23 4.01
39 40 2.298729 GGCAAGCAACAACCCAAATAGA 59.701 45.455 0.00 0.00 0.00 1.98
79 80 4.731313 AAATATAGGGAAGGAAGGCCAG 57.269 45.455 5.01 0.00 36.29 4.85
86 87 1.574263 GAAGGAAGGCCAGTCTAGGT 58.426 55.000 5.01 0.00 36.29 3.08
92 93 3.301274 GAAGGCCAGTCTAGGTGAGTAT 58.699 50.000 5.01 0.00 0.00 2.12
101 102 6.460399 CCAGTCTAGGTGAGTATAGAAGCAAC 60.460 46.154 0.00 0.00 30.11 4.17
107 108 7.997773 AGGTGAGTATAGAAGCAACGATATA 57.002 36.000 0.00 0.00 0.00 0.86
115 116 2.696526 AGCAACGATATAGGGGAGGA 57.303 50.000 0.00 0.00 0.00 3.71
132 133 0.391228 GGAATCGGAAGGGAGAGAGC 59.609 60.000 0.00 0.00 0.00 4.09
167 168 2.699846 CTGGGGAAGAGATCAGGAAGAG 59.300 54.545 0.00 0.00 0.00 2.85
191 192 4.018870 GGGGAATTAGGGAGGAGATCATTC 60.019 50.000 0.00 0.00 0.00 2.67
197 198 1.481428 GGGAGGAGATCATTCGAGGGA 60.481 57.143 0.00 0.00 0.00 4.20
198 199 1.892474 GGAGGAGATCATTCGAGGGAG 59.108 57.143 0.00 0.00 0.00 4.30
199 200 2.489985 GGAGGAGATCATTCGAGGGAGA 60.490 54.545 0.00 0.00 0.00 3.71
200 201 3.430453 GAGGAGATCATTCGAGGGAGAT 58.570 50.000 0.00 0.00 0.00 2.75
201 202 3.430453 AGGAGATCATTCGAGGGAGATC 58.570 50.000 0.00 9.21 37.69 2.75
203 204 2.163412 GAGATCATTCGAGGGAGATCCG 59.837 54.545 12.07 0.00 41.52 4.18
204 205 2.163509 GATCATTCGAGGGAGATCCGA 58.836 52.381 7.03 0.00 41.52 4.55
205 206 2.067365 TCATTCGAGGGAGATCCGAA 57.933 50.000 6.27 6.27 44.71 4.30
220 221 2.869636 CGAAGGAGGAGGAAGACGA 58.130 57.895 0.00 0.00 0.00 4.20
223 224 1.893801 GAAGGAGGAGGAAGACGACAA 59.106 52.381 0.00 0.00 0.00 3.18
244 245 2.036475 AGATGTCAGTCACCGGCATATC 59.964 50.000 0.00 0.00 0.00 1.63
272 273 2.036733 CGACAAGGGTAGTTGTTGGAGA 59.963 50.000 0.00 0.00 40.83 3.71
273 274 3.665190 GACAAGGGTAGTTGTTGGAGAG 58.335 50.000 0.00 0.00 40.83 3.20
278 279 5.584551 AGGGTAGTTGTTGGAGAGATTTT 57.415 39.130 0.00 0.00 0.00 1.82
281 282 4.392138 GGTAGTTGTTGGAGAGATTTTCCG 59.608 45.833 0.00 0.00 37.54 4.30
305 306 3.414269 GTCCAAAACCCCAATAAGACGA 58.586 45.455 0.00 0.00 0.00 4.20
312 313 4.706842 ACCCCAATAAGACGATTATGCT 57.293 40.909 0.00 0.00 0.00 3.79
313 314 5.048846 ACCCCAATAAGACGATTATGCTT 57.951 39.130 0.00 0.00 0.00 3.91
316 317 6.710744 ACCCCAATAAGACGATTATGCTTTAG 59.289 38.462 0.00 0.00 0.00 1.85
391 394 7.559335 TCATAGGATGATAGTACAAGCCATT 57.441 36.000 0.00 0.00 33.59 3.16
407 410 7.511268 ACAAGCCATTTATATACCGACCTAAA 58.489 34.615 0.00 0.00 0.00 1.85
448 451 6.648879 AAAATGCTAGCCTTTACACAAAGA 57.351 33.333 16.91 0.00 43.32 2.52
454 457 6.940298 TGCTAGCCTTTACACAAAGAAATACT 59.060 34.615 13.29 0.00 43.32 2.12
457 460 9.654663 CTAGCCTTTACACAAAGAAATACTAGT 57.345 33.333 0.00 0.00 43.32 2.57
492 495 7.921786 AATTACAATCAAGACCGAAGAATCA 57.078 32.000 0.00 0.00 0.00 2.57
506 509 5.757320 CCGAAGAATCATCTAAGCTTGACAT 59.243 40.000 9.86 0.00 33.77 3.06
514 517 4.226427 TCTAAGCTTGACATCAATGCCT 57.774 40.909 9.86 3.75 35.02 4.75
522 525 3.076621 TGACATCAATGCCTGTCACTTC 58.923 45.455 12.32 0.00 45.01 3.01
525 528 0.770499 TCAATGCCTGTCACTTCCCA 59.230 50.000 0.00 0.00 0.00 4.37
541 544 0.395036 CCCACTGACACCACCACAAA 60.395 55.000 0.00 0.00 0.00 2.83
544 547 2.091541 CACTGACACCACCACAAAAGT 58.908 47.619 0.00 0.00 0.00 2.66
613 617 2.672195 CGGCTCTATCGCTGATATGCAA 60.672 50.000 16.67 0.00 38.57 4.08
666 670 3.491104 GGCAAAACCATTACCGTTGAACA 60.491 43.478 0.00 0.00 38.86 3.18
672 676 5.776173 ACCATTACCGTTGAACAAATCAA 57.224 34.783 0.00 0.00 45.71 2.57
685 689 8.890124 TTGAACAAATCAAACAATGACATCAT 57.110 26.923 0.00 0.00 44.94 2.45
709 714 1.237285 ACACGCCATCAAACTCCAGC 61.237 55.000 0.00 0.00 0.00 4.85
732 738 1.070914 TGGCACCATCACACGACTAAA 59.929 47.619 0.00 0.00 0.00 1.85
737 743 4.261031 GCACCATCACACGACTAAAACTTT 60.261 41.667 0.00 0.00 0.00 2.66
763 769 4.785376 AGGAGAAAACCATACCTGTCATCT 59.215 41.667 0.00 0.00 0.00 2.90
785 791 0.820871 GAACCACAAACCCAGCACAA 59.179 50.000 0.00 0.00 0.00 3.33
786 792 1.412343 GAACCACAAACCCAGCACAAT 59.588 47.619 0.00 0.00 0.00 2.71
787 793 1.039856 ACCACAAACCCAGCACAATC 58.960 50.000 0.00 0.00 0.00 2.67
788 794 1.039068 CCACAAACCCAGCACAATCA 58.961 50.000 0.00 0.00 0.00 2.57
800 814 3.093814 AGCACAATCATTTCAGATGCCA 58.906 40.909 0.00 0.00 0.00 4.92
802 816 4.161565 AGCACAATCATTTCAGATGCCATT 59.838 37.500 0.00 0.00 0.00 3.16
809 823 7.776618 ATCATTTCAGATGCCATTGATACAT 57.223 32.000 0.00 0.00 0.00 2.29
824 839 7.255695 CCATTGATACATACCACAATCTGCATT 60.256 37.037 0.00 0.00 31.85 3.56
829 844 4.949238 ACATACCACAATCTGCATTTGCTA 59.051 37.500 8.91 0.00 42.66 3.49
841 856 4.651778 TGCATTTGCTACTGAACTACCTT 58.348 39.130 3.94 0.00 42.66 3.50
843 858 4.201724 GCATTTGCTACTGAACTACCTTCG 60.202 45.833 0.00 0.00 38.21 3.79
845 860 4.436242 TTGCTACTGAACTACCTTCGAG 57.564 45.455 0.00 0.00 0.00 4.04
846 861 3.682696 TGCTACTGAACTACCTTCGAGA 58.317 45.455 0.00 0.00 0.00 4.04
853 868 0.322277 ACTACCTTCGAGACTCCGCA 60.322 55.000 0.00 0.00 0.00 5.69
867 1608 2.230508 ACTCCGCAGTCTGAAAATACGA 59.769 45.455 3.32 0.00 0.00 3.43
875 1616 5.577164 GCAGTCTGAAAATACGAGTGTGTAT 59.423 40.000 3.32 0.00 36.62 2.29
876 1617 6.090898 GCAGTCTGAAAATACGAGTGTGTATT 59.909 38.462 3.32 0.00 44.71 1.89
882 1623 5.796350 AAATACGAGTGTGTATTTCAGGC 57.204 39.130 6.15 0.00 46.73 4.85
883 1624 4.737855 ATACGAGTGTGTATTTCAGGCT 57.262 40.909 0.00 0.00 31.01 4.58
884 1625 2.688507 ACGAGTGTGTATTTCAGGCTG 58.311 47.619 8.58 8.58 0.00 4.85
885 1626 2.037251 ACGAGTGTGTATTTCAGGCTGT 59.963 45.455 15.27 0.00 0.00 4.40
886 1627 3.067106 CGAGTGTGTATTTCAGGCTGTT 58.933 45.455 15.27 3.59 0.00 3.16
887 1628 3.123621 CGAGTGTGTATTTCAGGCTGTTC 59.876 47.826 15.27 2.74 0.00 3.18
888 1629 3.067106 AGTGTGTATTTCAGGCTGTTCG 58.933 45.455 15.27 0.00 0.00 3.95
889 1630 2.159627 GTGTGTATTTCAGGCTGTTCGG 59.840 50.000 15.27 0.00 0.00 4.30
890 1631 2.037902 TGTGTATTTCAGGCTGTTCGGA 59.962 45.455 15.27 0.00 0.00 4.55
891 1632 3.071479 GTGTATTTCAGGCTGTTCGGAA 58.929 45.455 15.27 0.00 0.00 4.30
892 1633 3.689649 GTGTATTTCAGGCTGTTCGGAAT 59.310 43.478 15.27 10.30 0.00 3.01
893 1634 4.156008 GTGTATTTCAGGCTGTTCGGAATT 59.844 41.667 15.27 0.34 0.00 2.17
894 1635 4.394920 TGTATTTCAGGCTGTTCGGAATTC 59.605 41.667 15.27 0.00 0.00 2.17
895 1636 1.821216 TTCAGGCTGTTCGGAATTCC 58.179 50.000 15.01 15.01 0.00 3.01
896 1637 0.690192 TCAGGCTGTTCGGAATTCCA 59.310 50.000 24.09 8.75 35.14 3.53
897 1638 0.804989 CAGGCTGTTCGGAATTCCAC 59.195 55.000 24.09 15.59 35.14 4.02
898 1639 0.322546 AGGCTGTTCGGAATTCCACC 60.323 55.000 24.09 13.84 35.14 4.61
899 1640 0.608035 GGCTGTTCGGAATTCCACCA 60.608 55.000 24.09 14.84 35.14 4.17
900 1641 0.804989 GCTGTTCGGAATTCCACCAG 59.195 55.000 24.09 22.82 35.14 4.00
901 1642 0.804989 CTGTTCGGAATTCCACCAGC 59.195 55.000 24.09 9.68 35.14 4.85
902 1643 0.400213 TGTTCGGAATTCCACCAGCT 59.600 50.000 24.09 0.00 35.14 4.24
903 1644 1.087501 GTTCGGAATTCCACCAGCTC 58.912 55.000 24.09 3.62 35.14 4.09
904 1645 0.035439 TTCGGAATTCCACCAGCTCC 60.035 55.000 24.09 0.00 35.14 4.70
905 1646 1.198094 TCGGAATTCCACCAGCTCCA 61.198 55.000 24.09 0.00 35.14 3.86
906 1647 1.026718 CGGAATTCCACCAGCTCCAC 61.027 60.000 24.09 0.00 35.14 4.02
907 1648 1.026718 GGAATTCCACCAGCTCCACG 61.027 60.000 20.04 0.00 35.64 4.94
908 1649 0.036388 GAATTCCACCAGCTCCACGA 60.036 55.000 0.00 0.00 0.00 4.35
909 1650 0.400213 AATTCCACCAGCTCCACGAA 59.600 50.000 0.00 0.00 0.00 3.85
910 1651 0.400213 ATTCCACCAGCTCCACGAAA 59.600 50.000 0.00 0.00 0.00 3.46
911 1652 0.400213 TTCCACCAGCTCCACGAAAT 59.600 50.000 0.00 0.00 0.00 2.17
912 1653 0.400213 TCCACCAGCTCCACGAAATT 59.600 50.000 0.00 0.00 0.00 1.82
913 1654 0.804989 CCACCAGCTCCACGAAATTC 59.195 55.000 0.00 0.00 0.00 2.17
914 1655 1.522668 CACCAGCTCCACGAAATTCA 58.477 50.000 0.00 0.00 0.00 2.57
915 1656 1.466167 CACCAGCTCCACGAAATTCAG 59.534 52.381 0.00 0.00 0.00 3.02
916 1657 1.089920 CCAGCTCCACGAAATTCAGG 58.910 55.000 0.00 0.00 0.00 3.86
917 1658 1.339055 CCAGCTCCACGAAATTCAGGA 60.339 52.381 4.45 4.45 0.00 3.86
918 1659 2.426522 CAGCTCCACGAAATTCAGGAA 58.573 47.619 5.80 0.00 0.00 3.36
919 1660 2.813754 CAGCTCCACGAAATTCAGGAAA 59.186 45.455 5.80 0.00 0.00 3.13
920 1661 3.441572 CAGCTCCACGAAATTCAGGAAAT 59.558 43.478 5.80 0.00 0.00 2.17
921 1662 4.635765 CAGCTCCACGAAATTCAGGAAATA 59.364 41.667 5.80 0.00 0.00 1.40
922 1663 4.878397 AGCTCCACGAAATTCAGGAAATAG 59.122 41.667 5.80 0.00 0.00 1.73
923 1664 4.496507 GCTCCACGAAATTCAGGAAATAGC 60.497 45.833 5.80 2.84 0.00 2.97
924 1665 4.843728 TCCACGAAATTCAGGAAATAGCT 58.156 39.130 2.20 0.00 0.00 3.32
925 1666 4.635765 TCCACGAAATTCAGGAAATAGCTG 59.364 41.667 0.00 0.00 0.00 4.24
926 1667 4.346129 CACGAAATTCAGGAAATAGCTGC 58.654 43.478 0.00 0.00 0.00 5.25
927 1668 4.095483 CACGAAATTCAGGAAATAGCTGCT 59.905 41.667 7.57 7.57 0.00 4.24
928 1669 4.333926 ACGAAATTCAGGAAATAGCTGCTC 59.666 41.667 4.91 0.00 0.00 4.26
929 1670 4.551603 CGAAATTCAGGAAATAGCTGCTCG 60.552 45.833 4.91 0.00 0.00 5.03
930 1671 1.656652 TTCAGGAAATAGCTGCTCGC 58.343 50.000 4.91 0.00 39.57 5.03
931 1672 0.528466 TCAGGAAATAGCTGCTCGCG 60.528 55.000 4.91 0.00 45.59 5.87
932 1673 1.227380 AGGAAATAGCTGCTCGCGG 60.227 57.895 4.91 0.00 45.59 6.46
933 1674 1.521681 GGAAATAGCTGCTCGCGGT 60.522 57.895 4.91 0.00 45.59 5.68
934 1675 1.090052 GGAAATAGCTGCTCGCGGTT 61.090 55.000 4.91 0.00 45.59 4.44
935 1676 0.727398 GAAATAGCTGCTCGCGGTTT 59.273 50.000 4.91 1.12 45.59 3.27
936 1677 1.130561 GAAATAGCTGCTCGCGGTTTT 59.869 47.619 4.91 0.00 45.59 2.43
937 1678 0.727398 AATAGCTGCTCGCGGTTTTC 59.273 50.000 4.91 0.00 45.59 2.29
938 1679 0.391130 ATAGCTGCTCGCGGTTTTCA 60.391 50.000 4.91 0.00 45.59 2.69
939 1680 0.601576 TAGCTGCTCGCGGTTTTCAA 60.602 50.000 4.91 0.00 45.59 2.69
940 1681 1.725973 GCTGCTCGCGGTTTTCAAC 60.726 57.895 6.13 0.00 0.00 3.18
941 1682 1.941812 CTGCTCGCGGTTTTCAACT 59.058 52.632 6.13 0.00 0.00 3.16
942 1683 1.144969 CTGCTCGCGGTTTTCAACTA 58.855 50.000 6.13 0.00 0.00 2.24
943 1684 0.863144 TGCTCGCGGTTTTCAACTAC 59.137 50.000 6.13 0.00 0.00 2.73
944 1685 0.863144 GCTCGCGGTTTTCAACTACA 59.137 50.000 6.13 0.00 0.00 2.74
945 1686 1.262151 GCTCGCGGTTTTCAACTACAA 59.738 47.619 6.13 0.00 0.00 2.41
946 1687 2.899977 CTCGCGGTTTTCAACTACAAC 58.100 47.619 6.13 0.00 0.00 3.32
947 1688 2.542595 CTCGCGGTTTTCAACTACAACT 59.457 45.455 6.13 0.00 0.00 3.16
948 1689 2.937799 TCGCGGTTTTCAACTACAACTT 59.062 40.909 6.13 0.00 0.00 2.66
949 1690 3.001533 TCGCGGTTTTCAACTACAACTTC 59.998 43.478 6.13 0.00 0.00 3.01
950 1691 3.242478 CGCGGTTTTCAACTACAACTTCA 60.242 43.478 0.00 0.00 0.00 3.02
951 1692 4.033019 GCGGTTTTCAACTACAACTTCAC 58.967 43.478 0.00 0.00 0.00 3.18
952 1693 4.594136 CGGTTTTCAACTACAACTTCACC 58.406 43.478 0.00 0.00 0.00 4.02
953 1694 4.496840 CGGTTTTCAACTACAACTTCACCC 60.497 45.833 0.00 0.00 0.00 4.61
954 1695 4.399934 GGTTTTCAACTACAACTTCACCCA 59.600 41.667 0.00 0.00 0.00 4.51
955 1696 5.337554 GTTTTCAACTACAACTTCACCCAC 58.662 41.667 0.00 0.00 0.00 4.61
956 1697 4.497291 TTCAACTACAACTTCACCCACT 57.503 40.909 0.00 0.00 0.00 4.00
957 1698 4.497291 TCAACTACAACTTCACCCACTT 57.503 40.909 0.00 0.00 0.00 3.16
958 1699 4.448210 TCAACTACAACTTCACCCACTTC 58.552 43.478 0.00 0.00 0.00 3.01
959 1700 3.107642 ACTACAACTTCACCCACTTCG 57.892 47.619 0.00 0.00 0.00 3.79
960 1701 2.224209 ACTACAACTTCACCCACTTCGG 60.224 50.000 0.00 0.00 0.00 4.30
961 1702 0.834612 ACAACTTCACCCACTTCGGA 59.165 50.000 0.00 0.00 36.56 4.55
962 1703 1.210967 ACAACTTCACCCACTTCGGAA 59.789 47.619 0.00 0.00 36.56 4.30
963 1704 1.873591 CAACTTCACCCACTTCGGAAG 59.126 52.381 15.96 15.96 41.83 3.46
964 1705 1.129058 ACTTCACCCACTTCGGAAGT 58.871 50.000 17.38 17.38 43.64 3.01
973 1714 2.240493 ACTTCGGAAGTGGAGTTGTG 57.760 50.000 21.86 0.00 41.01 3.33
974 1715 1.202651 ACTTCGGAAGTGGAGTTGTGG 60.203 52.381 21.86 0.00 41.01 4.17
975 1716 1.070134 CTTCGGAAGTGGAGTTGTGGA 59.930 52.381 9.61 0.00 0.00 4.02
976 1717 0.679505 TCGGAAGTGGAGTTGTGGAG 59.320 55.000 0.00 0.00 0.00 3.86
977 1718 0.679505 CGGAAGTGGAGTTGTGGAGA 59.320 55.000 0.00 0.00 0.00 3.71
978 1719 1.337260 CGGAAGTGGAGTTGTGGAGAG 60.337 57.143 0.00 0.00 0.00 3.20
979 1720 1.002544 GGAAGTGGAGTTGTGGAGAGG 59.997 57.143 0.00 0.00 0.00 3.69
980 1721 1.002544 GAAGTGGAGTTGTGGAGAGGG 59.997 57.143 0.00 0.00 0.00 4.30
981 1722 1.003233 GTGGAGTTGTGGAGAGGGC 60.003 63.158 0.00 0.00 0.00 5.19
1041 1782 1.525535 ATGGATGAAGCAGCTCGCC 60.526 57.895 0.00 0.00 44.04 5.54
1152 1893 4.077184 TACCCTGCTTCCGTGCCG 62.077 66.667 0.00 0.00 0.00 5.69
1335 2076 1.882625 CGATGAAATGCCGGCGAGA 60.883 57.895 23.90 4.21 0.00 4.04
1353 2094 0.168568 GAGACCTCGTCGTCTGGAAC 59.831 60.000 11.07 0.00 43.22 3.62
1563 2304 1.362768 CAGATGTGGTGACATGGACG 58.637 55.000 0.00 0.00 43.22 4.79
1564 2305 1.066929 CAGATGTGGTGACATGGACGA 60.067 52.381 0.00 0.00 43.22 4.20
1846 2587 1.685302 CCGCTTGTTCGACAAAATGG 58.315 50.000 0.00 0.00 37.69 3.16
2017 2758 2.629050 CTACGGTGGCATGGTCGAGG 62.629 65.000 0.00 0.00 0.00 4.63
2271 3012 2.022129 CGTCGAGCCAGAAAACGCT 61.022 57.895 0.00 0.00 38.27 5.07
2295 3036 4.129737 TACGTGCTGCTCTCGGGC 62.130 66.667 0.00 0.00 36.12 6.13
2329 3070 1.204312 GGCAAGCAGAACGACGTTC 59.796 57.895 28.90 28.90 42.25 3.95
2369 3110 1.816863 AAGAGACGGCGGCTGAAGAA 61.817 55.000 25.55 0.00 0.00 2.52
2410 3151 1.611519 AGAGACGTCCTAGCTATGGC 58.388 55.000 13.01 0.00 39.06 4.40
2411 3152 1.133761 AGAGACGTCCTAGCTATGGCA 60.134 52.381 13.01 0.00 41.70 4.92
2424 3165 1.532868 CTATGGCAACGATAAGCAGGC 59.467 52.381 0.00 0.00 42.51 4.85
2425 3166 0.107017 ATGGCAACGATAAGCAGGCT 60.107 50.000 0.00 0.00 42.51 4.58
2426 3167 0.539518 TGGCAACGATAAGCAGGCTA 59.460 50.000 0.00 0.00 42.51 3.93
2427 3168 1.065782 TGGCAACGATAAGCAGGCTAA 60.066 47.619 0.00 0.00 42.51 3.09
2428 3169 2.014128 GGCAACGATAAGCAGGCTAAA 58.986 47.619 0.00 0.00 0.00 1.85
2429 3170 2.422127 GGCAACGATAAGCAGGCTAAAA 59.578 45.455 0.00 0.00 0.00 1.52
2430 3171 3.487544 GGCAACGATAAGCAGGCTAAAAG 60.488 47.826 0.00 0.00 0.00 2.27
2431 3172 3.685058 CAACGATAAGCAGGCTAAAAGC 58.315 45.455 0.00 0.00 41.46 3.51
2432 3173 2.985896 ACGATAAGCAGGCTAAAAGCA 58.014 42.857 0.78 0.00 44.75 3.91
2433 3174 3.545703 ACGATAAGCAGGCTAAAAGCAT 58.454 40.909 0.78 0.00 44.75 3.79
2434 3175 3.947834 ACGATAAGCAGGCTAAAAGCATT 59.052 39.130 0.78 0.00 44.75 3.56
2435 3176 5.123227 ACGATAAGCAGGCTAAAAGCATTA 58.877 37.500 0.78 0.00 44.75 1.90
2436 3177 5.007724 ACGATAAGCAGGCTAAAAGCATTAC 59.992 40.000 0.78 0.00 44.75 1.89
2437 3178 5.237344 CGATAAGCAGGCTAAAAGCATTACT 59.763 40.000 0.78 0.00 44.75 2.24
2438 3179 6.423905 CGATAAGCAGGCTAAAAGCATTACTA 59.576 38.462 0.78 0.00 44.75 1.82
2439 3180 7.359598 CGATAAGCAGGCTAAAAGCATTACTAG 60.360 40.741 0.78 0.00 44.75 2.57
2440 3181 5.104259 AGCAGGCTAAAAGCATTACTAGT 57.896 39.130 0.00 0.00 44.75 2.57
2441 3182 6.235231 AGCAGGCTAAAAGCATTACTAGTA 57.765 37.500 0.00 0.00 44.75 1.82
2442 3183 6.284459 AGCAGGCTAAAAGCATTACTAGTAG 58.716 40.000 2.23 0.00 44.75 2.57
2443 3184 6.098409 AGCAGGCTAAAAGCATTACTAGTAGA 59.902 38.462 3.59 0.00 44.75 2.59
2444 3185 6.761714 GCAGGCTAAAAGCATTACTAGTAGAA 59.238 38.462 3.59 0.00 44.75 2.10
2445 3186 7.254488 GCAGGCTAAAAGCATTACTAGTAGAAC 60.254 40.741 3.59 0.00 44.75 3.01
2446 3187 7.224949 CAGGCTAAAAGCATTACTAGTAGAACC 59.775 40.741 3.59 0.00 44.75 3.62
2447 3188 7.125963 AGGCTAAAAGCATTACTAGTAGAACCT 59.874 37.037 3.59 0.00 44.75 3.50
2448 3189 7.769507 GGCTAAAAGCATTACTAGTAGAACCTT 59.230 37.037 3.59 2.71 44.75 3.50
2449 3190 8.819015 GCTAAAAGCATTACTAGTAGAACCTTC 58.181 37.037 3.59 0.00 41.89 3.46
2450 3191 9.871238 CTAAAAGCATTACTAGTAGAACCTTCA 57.129 33.333 3.59 0.00 0.00 3.02
2452 3193 9.569122 AAAAGCATTACTAGTAGAACCTTCAAA 57.431 29.630 3.59 0.00 0.00 2.69
2453 3194 8.549338 AAGCATTACTAGTAGAACCTTCAAAC 57.451 34.615 3.59 0.00 0.00 2.93
2454 3195 7.104290 AGCATTACTAGTAGAACCTTCAAACC 58.896 38.462 3.59 0.00 0.00 3.27
2455 3196 7.038231 AGCATTACTAGTAGAACCTTCAAACCT 60.038 37.037 3.59 0.00 0.00 3.50
2456 3197 7.606839 GCATTACTAGTAGAACCTTCAAACCTT 59.393 37.037 3.59 0.00 0.00 3.50
2457 3198 9.152595 CATTACTAGTAGAACCTTCAAACCTTC 57.847 37.037 3.59 0.00 0.00 3.46
2458 3199 6.742559 ACTAGTAGAACCTTCAAACCTTCA 57.257 37.500 3.59 0.00 0.00 3.02
2459 3200 6.522946 ACTAGTAGAACCTTCAAACCTTCAC 58.477 40.000 3.59 0.00 0.00 3.18
2460 3201 5.632034 AGTAGAACCTTCAAACCTTCACT 57.368 39.130 0.00 0.00 0.00 3.41
2461 3202 6.742559 AGTAGAACCTTCAAACCTTCACTA 57.257 37.500 0.00 0.00 0.00 2.74
2462 3203 6.760291 AGTAGAACCTTCAAACCTTCACTAG 58.240 40.000 0.00 0.00 0.00 2.57
2463 3204 4.390264 AGAACCTTCAAACCTTCACTAGC 58.610 43.478 0.00 0.00 0.00 3.42
2464 3205 3.857157 ACCTTCAAACCTTCACTAGCA 57.143 42.857 0.00 0.00 0.00 3.49
2465 3206 4.373156 ACCTTCAAACCTTCACTAGCAT 57.627 40.909 0.00 0.00 0.00 3.79
2466 3207 4.729868 ACCTTCAAACCTTCACTAGCATT 58.270 39.130 0.00 0.00 0.00 3.56
2467 3208 5.140454 ACCTTCAAACCTTCACTAGCATTT 58.860 37.500 0.00 0.00 0.00 2.32
2468 3209 5.598417 ACCTTCAAACCTTCACTAGCATTTT 59.402 36.000 0.00 0.00 0.00 1.82
2469 3210 6.775629 ACCTTCAAACCTTCACTAGCATTTTA 59.224 34.615 0.00 0.00 0.00 1.52
2470 3211 7.286775 ACCTTCAAACCTTCACTAGCATTTTAA 59.713 33.333 0.00 0.00 0.00 1.52
2471 3212 7.809806 CCTTCAAACCTTCACTAGCATTTTAAG 59.190 37.037 0.00 0.00 0.00 1.85
2472 3213 7.214467 TCAAACCTTCACTAGCATTTTAAGG 57.786 36.000 0.00 0.00 39.50 2.69
2473 3214 6.208599 TCAAACCTTCACTAGCATTTTAAGGG 59.791 38.462 10.66 0.00 38.22 3.95
2474 3215 5.256806 ACCTTCACTAGCATTTTAAGGGT 57.743 39.130 10.66 0.00 38.22 4.34
2475 3216 5.254115 ACCTTCACTAGCATTTTAAGGGTC 58.746 41.667 10.66 0.00 38.22 4.46
2476 3217 4.640647 CCTTCACTAGCATTTTAAGGGTCC 59.359 45.833 0.00 0.00 31.76 4.46
2477 3218 4.919774 TCACTAGCATTTTAAGGGTCCA 57.080 40.909 0.00 0.00 0.00 4.02
2478 3219 5.249780 TCACTAGCATTTTAAGGGTCCAA 57.750 39.130 0.00 0.00 0.00 3.53
2479 3220 5.636123 TCACTAGCATTTTAAGGGTCCAAA 58.364 37.500 0.00 0.00 0.00 3.28
2480 3221 6.071984 TCACTAGCATTTTAAGGGTCCAAAA 58.928 36.000 0.00 0.00 0.00 2.44
2481 3222 6.551601 TCACTAGCATTTTAAGGGTCCAAAAA 59.448 34.615 0.00 0.00 0.00 1.94
2482 3223 7.234577 TCACTAGCATTTTAAGGGTCCAAAAAT 59.765 33.333 0.00 7.04 34.09 1.82
2483 3224 8.527810 CACTAGCATTTTAAGGGTCCAAAAATA 58.472 33.333 10.62 0.45 32.89 1.40
2484 3225 9.095700 ACTAGCATTTTAAGGGTCCAAAAATAA 57.904 29.630 10.62 3.27 32.89 1.40
2487 3228 9.806448 AGCATTTTAAGGGTCCAAAAATAATTT 57.194 25.926 10.62 0.00 32.89 1.82
2518 3259 7.707774 ACATTTTTACGGATTGAAAAACAGG 57.292 32.000 0.00 0.00 37.35 4.00
2519 3260 6.704050 ACATTTTTACGGATTGAAAAACAGGG 59.296 34.615 0.00 0.00 37.35 4.45
2520 3261 6.466885 TTTTTACGGATTGAAAAACAGGGA 57.533 33.333 0.00 0.00 31.34 4.20
2521 3262 5.441709 TTTACGGATTGAAAAACAGGGAC 57.558 39.130 0.00 0.00 0.00 4.46
2522 3263 2.938838 ACGGATTGAAAAACAGGGACA 58.061 42.857 0.00 0.00 0.00 4.02
2523 3264 3.292460 ACGGATTGAAAAACAGGGACAA 58.708 40.909 0.00 0.00 0.00 3.18
2524 3265 3.702045 ACGGATTGAAAAACAGGGACAAA 59.298 39.130 0.00 0.00 0.00 2.83
2525 3266 4.202111 ACGGATTGAAAAACAGGGACAAAG 60.202 41.667 0.00 0.00 0.00 2.77
2526 3267 4.037446 CGGATTGAAAAACAGGGACAAAGA 59.963 41.667 0.00 0.00 0.00 2.52
2527 3268 5.278957 CGGATTGAAAAACAGGGACAAAGAT 60.279 40.000 0.00 0.00 0.00 2.40
2528 3269 6.524734 GGATTGAAAAACAGGGACAAAGATT 58.475 36.000 0.00 0.00 0.00 2.40
2529 3270 7.523052 CGGATTGAAAAACAGGGACAAAGATTA 60.523 37.037 0.00 0.00 0.00 1.75
2530 3271 7.814587 GGATTGAAAAACAGGGACAAAGATTAG 59.185 37.037 0.00 0.00 0.00 1.73
2531 3272 7.889873 TTGAAAAACAGGGACAAAGATTAGA 57.110 32.000 0.00 0.00 0.00 2.10
2532 3273 7.889873 TGAAAAACAGGGACAAAGATTAGAA 57.110 32.000 0.00 0.00 0.00 2.10
2533 3274 7.712797 TGAAAAACAGGGACAAAGATTAGAAC 58.287 34.615 0.00 0.00 0.00 3.01
2534 3275 7.559897 TGAAAAACAGGGACAAAGATTAGAACT 59.440 33.333 0.00 0.00 0.00 3.01
2535 3276 7.511959 AAAACAGGGACAAAGATTAGAACTC 57.488 36.000 0.00 0.00 0.00 3.01
2536 3277 6.441088 AACAGGGACAAAGATTAGAACTCT 57.559 37.500 0.00 0.00 0.00 3.24
2537 3278 6.043854 ACAGGGACAAAGATTAGAACTCTC 57.956 41.667 0.00 0.00 0.00 3.20
2538 3279 5.544176 ACAGGGACAAAGATTAGAACTCTCA 59.456 40.000 0.00 0.00 0.00 3.27
2539 3280 6.043243 ACAGGGACAAAGATTAGAACTCTCAA 59.957 38.462 0.00 0.00 0.00 3.02
2540 3281 6.936900 CAGGGACAAAGATTAGAACTCTCAAA 59.063 38.462 0.00 0.00 0.00 2.69
2541 3282 6.937465 AGGGACAAAGATTAGAACTCTCAAAC 59.063 38.462 0.00 0.00 0.00 2.93
2542 3283 6.149640 GGGACAAAGATTAGAACTCTCAAACC 59.850 42.308 0.00 0.00 0.00 3.27
2543 3284 6.149640 GGACAAAGATTAGAACTCTCAAACCC 59.850 42.308 0.00 0.00 0.00 4.11
2544 3285 6.601332 ACAAAGATTAGAACTCTCAAACCCA 58.399 36.000 0.00 0.00 0.00 4.51
2545 3286 7.060421 ACAAAGATTAGAACTCTCAAACCCAA 58.940 34.615 0.00 0.00 0.00 4.12
2546 3287 7.013369 ACAAAGATTAGAACTCTCAAACCCAAC 59.987 37.037 0.00 0.00 0.00 3.77
2547 3288 5.561679 AGATTAGAACTCTCAAACCCAACC 58.438 41.667 0.00 0.00 0.00 3.77
2548 3289 2.658807 AGAACTCTCAAACCCAACCC 57.341 50.000 0.00 0.00 0.00 4.11
2549 3290 2.136026 AGAACTCTCAAACCCAACCCT 58.864 47.619 0.00 0.00 0.00 4.34
2550 3291 2.514160 AGAACTCTCAAACCCAACCCTT 59.486 45.455 0.00 0.00 0.00 3.95
2551 3292 3.720002 AGAACTCTCAAACCCAACCCTTA 59.280 43.478 0.00 0.00 0.00 2.69
2552 3293 4.354087 AGAACTCTCAAACCCAACCCTTAT 59.646 41.667 0.00 0.00 0.00 1.73
2553 3294 5.550403 AGAACTCTCAAACCCAACCCTTATA 59.450 40.000 0.00 0.00 0.00 0.98
2554 3295 5.853572 ACTCTCAAACCCAACCCTTATAA 57.146 39.130 0.00 0.00 0.00 0.98
2555 3296 5.567430 ACTCTCAAACCCAACCCTTATAAC 58.433 41.667 0.00 0.00 0.00 1.89
2556 3297 5.073965 ACTCTCAAACCCAACCCTTATAACA 59.926 40.000 0.00 0.00 0.00 2.41
2557 3298 6.147437 TCTCAAACCCAACCCTTATAACAT 57.853 37.500 0.00 0.00 0.00 2.71
2558 3299 7.037153 ACTCTCAAACCCAACCCTTATAACATA 60.037 37.037 0.00 0.00 0.00 2.29
2559 3300 7.700846 TCTCAAACCCAACCCTTATAACATAA 58.299 34.615 0.00 0.00 0.00 1.90
2560 3301 8.340757 TCTCAAACCCAACCCTTATAACATAAT 58.659 33.333 0.00 0.00 0.00 1.28
2561 3302 9.635404 CTCAAACCCAACCCTTATAACATAATA 57.365 33.333 0.00 0.00 0.00 0.98
2567 3308 9.462606 CCCAACCCTTATAACATAATATTCTCC 57.537 37.037 0.00 0.00 0.00 3.71
2577 3318 7.408132 AACATAATATTCTCCATGAACGACG 57.592 36.000 0.00 0.00 37.52 5.12
2578 3319 6.513180 ACATAATATTCTCCATGAACGACGT 58.487 36.000 0.00 0.00 37.52 4.34
2579 3320 6.984474 ACATAATATTCTCCATGAACGACGTT 59.016 34.615 14.11 14.11 37.52 3.99
2580 3321 5.718649 AATATTCTCCATGAACGACGTTG 57.281 39.130 19.60 4.40 37.52 4.10
2581 3322 2.519377 TTCTCCATGAACGACGTTGT 57.481 45.000 19.60 1.48 0.00 3.32
2582 3323 2.060326 TCTCCATGAACGACGTTGTC 57.940 50.000 19.60 5.24 0.00 3.18
2669 3410 4.452733 GGACGCGGGAGTTGGGAG 62.453 72.222 12.47 0.00 0.00 4.30
2670 3411 4.452733 GACGCGGGAGTTGGGAGG 62.453 72.222 12.47 0.00 0.00 4.30
2672 3413 3.470888 CGCGGGAGTTGGGAGGAT 61.471 66.667 0.00 0.00 0.00 3.24
2673 3414 2.998949 GCGGGAGTTGGGAGGATT 59.001 61.111 0.00 0.00 0.00 3.01
2674 3415 1.303282 GCGGGAGTTGGGAGGATTT 59.697 57.895 0.00 0.00 0.00 2.17
2675 3416 0.323451 GCGGGAGTTGGGAGGATTTT 60.323 55.000 0.00 0.00 0.00 1.82
2676 3417 1.891011 GCGGGAGTTGGGAGGATTTTT 60.891 52.381 0.00 0.00 0.00 1.94
2677 3418 2.092323 CGGGAGTTGGGAGGATTTTTC 58.908 52.381 0.00 0.00 0.00 2.29
2678 3419 2.457598 GGGAGTTGGGAGGATTTTTCC 58.542 52.381 0.00 0.00 0.00 3.13
2685 3426 2.795165 GAGGATTTTTCCCTCCCGC 58.205 57.895 0.00 0.00 43.37 6.13
2686 3427 1.077716 AGGATTTTTCCCTCCCGCG 60.078 57.895 0.00 0.00 31.49 6.46
2687 3428 2.771639 GGATTTTTCCCTCCCGCGC 61.772 63.158 0.00 0.00 0.00 6.86
2688 3429 3.108357 GATTTTTCCCTCCCGCGCG 62.108 63.158 25.67 25.67 0.00 6.86
2689 3430 3.615509 ATTTTTCCCTCCCGCGCGA 62.616 57.895 34.63 11.99 0.00 5.87
2690 3431 4.752879 TTTTCCCTCCCGCGCGAG 62.753 66.667 34.63 20.97 0.00 5.03
2693 3434 4.889112 TCCCTCCCGCGCGAGTAT 62.889 66.667 34.63 0.00 0.00 2.12
2694 3435 2.963928 TTCCCTCCCGCGCGAGTATA 62.964 60.000 34.63 9.13 0.00 1.47
2695 3436 2.558286 CCCTCCCGCGCGAGTATAA 61.558 63.158 34.63 8.45 0.00 0.98
2696 3437 1.371389 CCTCCCGCGCGAGTATAAC 60.371 63.158 34.63 0.00 0.00 1.89
2697 3438 1.371389 CTCCCGCGCGAGTATAACC 60.371 63.158 34.63 0.00 0.00 2.85
2698 3439 2.728383 CCCGCGCGAGTATAACCG 60.728 66.667 34.63 10.97 0.00 4.44
2705 3446 2.663279 GCGAGTATAACCGCCAAATG 57.337 50.000 8.35 0.00 45.06 2.32
2706 3447 2.206750 GCGAGTATAACCGCCAAATGA 58.793 47.619 8.35 0.00 45.06 2.57
2707 3448 2.221055 GCGAGTATAACCGCCAAATGAG 59.779 50.000 8.35 0.00 45.06 2.90
2708 3449 2.800544 CGAGTATAACCGCCAAATGAGG 59.199 50.000 0.00 0.00 0.00 3.86
2709 3450 3.139077 GAGTATAACCGCCAAATGAGGG 58.861 50.000 0.00 0.00 0.00 4.30
2710 3451 2.508300 AGTATAACCGCCAAATGAGGGT 59.492 45.455 0.00 0.00 0.00 4.34
2711 3452 2.525105 ATAACCGCCAAATGAGGGTT 57.475 45.000 11.18 11.18 44.49 4.11
2712 3453 1.540267 TAACCGCCAAATGAGGGTTG 58.460 50.000 14.43 0.00 42.44 3.77
2714 3455 2.350458 CCGCCAAATGAGGGTTGGG 61.350 63.158 5.41 0.00 44.87 4.12
2715 3456 1.304052 CGCCAAATGAGGGTTGGGA 60.304 57.895 5.41 0.00 44.87 4.37
2716 3457 0.684153 CGCCAAATGAGGGTTGGGAT 60.684 55.000 5.41 0.00 44.87 3.85
2717 3458 1.409521 CGCCAAATGAGGGTTGGGATA 60.410 52.381 5.41 0.00 44.87 2.59
2718 3459 2.310538 GCCAAATGAGGGTTGGGATAG 58.689 52.381 5.41 0.00 44.87 2.08
2719 3460 2.949447 CCAAATGAGGGTTGGGATAGG 58.051 52.381 0.00 0.00 41.64 2.57
2720 3461 2.244769 CCAAATGAGGGTTGGGATAGGT 59.755 50.000 0.00 0.00 41.64 3.08
2721 3462 3.309848 CCAAATGAGGGTTGGGATAGGTT 60.310 47.826 0.00 0.00 41.64 3.50
2722 3463 4.352893 CAAATGAGGGTTGGGATAGGTTT 58.647 43.478 0.00 0.00 0.00 3.27
2723 3464 4.692523 AATGAGGGTTGGGATAGGTTTT 57.307 40.909 0.00 0.00 0.00 2.43
2724 3465 3.449746 TGAGGGTTGGGATAGGTTTTG 57.550 47.619 0.00 0.00 0.00 2.44
2725 3466 2.100197 GAGGGTTGGGATAGGTTTTGC 58.900 52.381 0.00 0.00 0.00 3.68
2726 3467 1.716503 AGGGTTGGGATAGGTTTTGCT 59.283 47.619 0.00 0.00 0.00 3.91
2727 3468 2.100197 GGGTTGGGATAGGTTTTGCTC 58.900 52.381 0.00 0.00 0.00 4.26
2728 3469 2.100197 GGTTGGGATAGGTTTTGCTCC 58.900 52.381 0.00 0.00 0.00 4.70
2729 3470 2.100197 GTTGGGATAGGTTTTGCTCCC 58.900 52.381 0.00 0.00 46.41 4.30
2730 3471 0.629058 TGGGATAGGTTTTGCTCCCC 59.371 55.000 4.10 0.00 45.77 4.81
2731 3472 0.629058 GGGATAGGTTTTGCTCCCCA 59.371 55.000 0.00 0.00 41.35 4.96
2732 3473 1.006639 GGGATAGGTTTTGCTCCCCAA 59.993 52.381 0.00 0.00 41.35 4.12
2733 3474 2.100197 GGATAGGTTTTGCTCCCCAAC 58.900 52.381 0.00 0.00 31.97 3.77
2734 3475 2.100197 GATAGGTTTTGCTCCCCAACC 58.900 52.381 0.00 0.00 40.40 3.77
2735 3476 0.113580 TAGGTTTTGCTCCCCAACCC 59.886 55.000 0.00 0.00 40.92 4.11
2736 3477 1.152333 GGTTTTGCTCCCCAACCCT 60.152 57.895 0.00 0.00 34.90 4.34
2737 3478 0.762842 GGTTTTGCTCCCCAACCCTT 60.763 55.000 0.00 0.00 34.90 3.95
2738 3479 1.481615 GGTTTTGCTCCCCAACCCTTA 60.482 52.381 0.00 0.00 34.90 2.69
2739 3480 1.616865 GTTTTGCTCCCCAACCCTTAC 59.383 52.381 0.00 0.00 31.97 2.34
2740 3481 1.154430 TTTGCTCCCCAACCCTTACT 58.846 50.000 0.00 0.00 31.97 2.24
2741 3482 1.154430 TTGCTCCCCAACCCTTACTT 58.846 50.000 0.00 0.00 0.00 2.24
2742 3483 1.154430 TGCTCCCCAACCCTTACTTT 58.846 50.000 0.00 0.00 0.00 2.66
2743 3484 1.501604 TGCTCCCCAACCCTTACTTTT 59.498 47.619 0.00 0.00 0.00 2.27
2744 3485 1.893137 GCTCCCCAACCCTTACTTTTG 59.107 52.381 0.00 0.00 0.00 2.44
2745 3486 2.490168 GCTCCCCAACCCTTACTTTTGA 60.490 50.000 0.00 0.00 0.00 2.69
2746 3487 3.421844 CTCCCCAACCCTTACTTTTGAG 58.578 50.000 0.00 0.00 0.00 3.02
2747 3488 2.109304 TCCCCAACCCTTACTTTTGAGG 59.891 50.000 0.00 0.00 0.00 3.86
2748 3489 2.109304 CCCCAACCCTTACTTTTGAGGA 59.891 50.000 0.00 0.00 34.91 3.71
2749 3490 3.245622 CCCCAACCCTTACTTTTGAGGAT 60.246 47.826 0.00 0.00 34.91 3.24
2750 3491 4.416516 CCCAACCCTTACTTTTGAGGATT 58.583 43.478 0.00 0.00 34.91 3.01
2751 3492 4.220602 CCCAACCCTTACTTTTGAGGATTG 59.779 45.833 0.00 0.00 34.91 2.67
2752 3493 4.220602 CCAACCCTTACTTTTGAGGATTGG 59.779 45.833 1.27 1.27 34.91 3.16
2753 3494 4.047627 ACCCTTACTTTTGAGGATTGGG 57.952 45.455 0.00 0.00 34.91 4.12
2754 3495 3.660669 ACCCTTACTTTTGAGGATTGGGA 59.339 43.478 0.00 0.00 34.91 4.37
2755 3496 4.107311 ACCCTTACTTTTGAGGATTGGGAA 59.893 41.667 0.00 0.00 34.91 3.97
2756 3497 5.083821 CCCTTACTTTTGAGGATTGGGAAA 58.916 41.667 0.00 0.00 34.91 3.13
2757 3498 5.185828 CCCTTACTTTTGAGGATTGGGAAAG 59.814 44.000 0.00 0.00 34.91 2.62
2758 3499 5.185828 CCTTACTTTTGAGGATTGGGAAAGG 59.814 44.000 0.00 0.00 34.91 3.11
2759 3500 3.510459 ACTTTTGAGGATTGGGAAAGGG 58.490 45.455 0.00 0.00 32.95 3.95
2760 3501 3.116746 ACTTTTGAGGATTGGGAAAGGGT 60.117 43.478 0.00 0.00 32.95 4.34
2761 3502 3.628832 TTTGAGGATTGGGAAAGGGTT 57.371 42.857 0.00 0.00 0.00 4.11
2762 3503 3.628832 TTGAGGATTGGGAAAGGGTTT 57.371 42.857 0.00 0.00 0.00 3.27
2763 3504 2.888212 TGAGGATTGGGAAAGGGTTTG 58.112 47.619 0.00 0.00 0.00 2.93
2764 3505 2.448961 TGAGGATTGGGAAAGGGTTTGA 59.551 45.455 0.00 0.00 0.00 2.69
2765 3506 3.092301 GAGGATTGGGAAAGGGTTTGAG 58.908 50.000 0.00 0.00 0.00 3.02
2766 3507 2.179427 GGATTGGGAAAGGGTTTGAGG 58.821 52.381 0.00 0.00 0.00 3.86
2767 3508 2.225267 GGATTGGGAAAGGGTTTGAGGA 60.225 50.000 0.00 0.00 0.00 3.71
2768 3509 3.566553 GGATTGGGAAAGGGTTTGAGGAT 60.567 47.826 0.00 0.00 0.00 3.24
2769 3510 3.628832 TTGGGAAAGGGTTTGAGGATT 57.371 42.857 0.00 0.00 0.00 3.01
2770 3511 2.888212 TGGGAAAGGGTTTGAGGATTG 58.112 47.619 0.00 0.00 0.00 2.67
2771 3512 2.179427 GGGAAAGGGTTTGAGGATTGG 58.821 52.381 0.00 0.00 0.00 3.16
2772 3513 2.225267 GGGAAAGGGTTTGAGGATTGGA 60.225 50.000 0.00 0.00 0.00 3.53
2773 3514 2.826128 GGAAAGGGTTTGAGGATTGGAC 59.174 50.000 0.00 0.00 0.00 4.02
2774 3515 3.500471 GGAAAGGGTTTGAGGATTGGACT 60.500 47.826 0.00 0.00 0.00 3.85
2775 3516 3.903530 AAGGGTTTGAGGATTGGACTT 57.096 42.857 0.00 0.00 0.00 3.01
2776 3517 3.903530 AGGGTTTGAGGATTGGACTTT 57.096 42.857 0.00 0.00 0.00 2.66
2777 3518 4.199002 AGGGTTTGAGGATTGGACTTTT 57.801 40.909 0.00 0.00 0.00 2.27
2778 3519 5.333566 AGGGTTTGAGGATTGGACTTTTA 57.666 39.130 0.00 0.00 0.00 1.52
2779 3520 5.711698 AGGGTTTGAGGATTGGACTTTTAA 58.288 37.500 0.00 0.00 0.00 1.52
2780 3521 6.140377 AGGGTTTGAGGATTGGACTTTTAAA 58.860 36.000 0.00 0.00 0.00 1.52
2781 3522 6.613679 AGGGTTTGAGGATTGGACTTTTAAAA 59.386 34.615 0.00 0.00 0.00 1.52
2782 3523 7.126573 AGGGTTTGAGGATTGGACTTTTAAAAA 59.873 33.333 1.66 0.00 0.00 1.94
2802 3543 5.708736 AAAAATTTGAGGGTTTGAGGGTT 57.291 34.783 0.00 0.00 0.00 4.11
2803 3544 6.816616 AAAAATTTGAGGGTTTGAGGGTTA 57.183 33.333 0.00 0.00 0.00 2.85
2804 3545 6.816616 AAAATTTGAGGGTTTGAGGGTTAA 57.183 33.333 0.00 0.00 0.00 2.01
2805 3546 6.419484 AAATTTGAGGGTTTGAGGGTTAAG 57.581 37.500 0.00 0.00 0.00 1.85
2806 3547 3.518992 TTGAGGGTTTGAGGGTTAAGG 57.481 47.619 0.00 0.00 0.00 2.69
2807 3548 1.708551 TGAGGGTTTGAGGGTTAAGGG 59.291 52.381 0.00 0.00 0.00 3.95
2808 3549 1.005569 GAGGGTTTGAGGGTTAAGGGG 59.994 57.143 0.00 0.00 0.00 4.79
2809 3550 0.781920 GGGTTTGAGGGTTAAGGGGT 59.218 55.000 0.00 0.00 0.00 4.95
2810 3551 1.148446 GGGTTTGAGGGTTAAGGGGTT 59.852 52.381 0.00 0.00 0.00 4.11
2811 3552 2.522185 GGTTTGAGGGTTAAGGGGTTC 58.478 52.381 0.00 0.00 0.00 3.62
2812 3553 2.109480 GGTTTGAGGGTTAAGGGGTTCT 59.891 50.000 0.00 0.00 0.00 3.01
2813 3554 3.331591 GGTTTGAGGGTTAAGGGGTTCTA 59.668 47.826 0.00 0.00 0.00 2.10
2814 3555 4.567116 GGTTTGAGGGTTAAGGGGTTCTAG 60.567 50.000 0.00 0.00 0.00 2.43
2815 3556 3.572661 TGAGGGTTAAGGGGTTCTAGT 57.427 47.619 0.00 0.00 0.00 2.57
2816 3557 3.447950 TGAGGGTTAAGGGGTTCTAGTC 58.552 50.000 0.00 0.00 0.00 2.59
2817 3558 3.078612 TGAGGGTTAAGGGGTTCTAGTCT 59.921 47.826 0.00 0.00 0.00 3.24
2818 3559 4.295775 TGAGGGTTAAGGGGTTCTAGTCTA 59.704 45.833 0.00 0.00 0.00 2.59
2819 3560 4.618635 AGGGTTAAGGGGTTCTAGTCTAC 58.381 47.826 0.00 0.00 0.00 2.59
2820 3561 3.382865 GGGTTAAGGGGTTCTAGTCTACG 59.617 52.174 0.00 0.00 0.00 3.51
2821 3562 3.382865 GGTTAAGGGGTTCTAGTCTACGG 59.617 52.174 0.00 0.00 0.00 4.02
2822 3563 1.482954 AAGGGGTTCTAGTCTACGGC 58.517 55.000 0.00 0.00 0.00 5.68
2823 3564 0.630134 AGGGGTTCTAGTCTACGGCT 59.370 55.000 0.00 0.00 0.00 5.52
2824 3565 1.006878 AGGGGTTCTAGTCTACGGCTT 59.993 52.381 0.00 0.00 0.00 4.35
2825 3566 1.829849 GGGGTTCTAGTCTACGGCTTT 59.170 52.381 0.00 0.00 0.00 3.51
2826 3567 2.235650 GGGGTTCTAGTCTACGGCTTTT 59.764 50.000 0.00 0.00 0.00 2.27
2827 3568 3.307269 GGGGTTCTAGTCTACGGCTTTTT 60.307 47.826 0.00 0.00 0.00 1.94
2871 3612 9.607988 AAAAACAGTTATTTTTAGGGGTTTGAG 57.392 29.630 0.00 0.00 39.43 3.02
2872 3613 6.911250 ACAGTTATTTTTAGGGGTTTGAGG 57.089 37.500 0.00 0.00 0.00 3.86
2873 3614 5.778241 ACAGTTATTTTTAGGGGTTTGAGGG 59.222 40.000 0.00 0.00 0.00 4.30
2874 3615 4.775780 AGTTATTTTTAGGGGTTTGAGGGC 59.224 41.667 0.00 0.00 0.00 5.19
2875 3616 3.560357 ATTTTTAGGGGTTTGAGGGCT 57.440 42.857 0.00 0.00 0.00 5.19
2876 3617 2.597578 TTTTAGGGGTTTGAGGGCTC 57.402 50.000 0.00 0.00 0.00 4.70
2877 3618 1.755200 TTTAGGGGTTTGAGGGCTCT 58.245 50.000 0.00 0.00 0.00 4.09
2878 3619 2.653543 TTAGGGGTTTGAGGGCTCTA 57.346 50.000 0.00 0.00 0.00 2.43
2879 3620 1.875488 TAGGGGTTTGAGGGCTCTAC 58.125 55.000 0.00 0.00 0.00 2.59
2880 3621 0.119358 AGGGGTTTGAGGGCTCTACT 59.881 55.000 0.00 0.00 0.00 2.57
2881 3622 1.365028 AGGGGTTTGAGGGCTCTACTA 59.635 52.381 0.00 0.00 0.00 1.82
2882 3623 1.763545 GGGGTTTGAGGGCTCTACTAG 59.236 57.143 0.00 0.00 0.00 2.57
2883 3624 2.468915 GGGTTTGAGGGCTCTACTAGT 58.531 52.381 0.00 0.00 0.00 2.57
2884 3625 3.629282 GGGGTTTGAGGGCTCTACTAGTA 60.629 52.174 1.89 1.89 0.00 1.82
2885 3626 4.028825 GGGTTTGAGGGCTCTACTAGTAA 58.971 47.826 3.76 0.00 0.00 2.24
2886 3627 4.654724 GGGTTTGAGGGCTCTACTAGTAAT 59.345 45.833 3.76 0.00 0.00 1.89
2887 3628 5.453480 GGGTTTGAGGGCTCTACTAGTAATG 60.453 48.000 3.76 1.11 0.00 1.90
2888 3629 5.128991 GGTTTGAGGGCTCTACTAGTAATGT 59.871 44.000 3.76 0.00 0.00 2.71
2889 3630 6.351966 GGTTTGAGGGCTCTACTAGTAATGTT 60.352 42.308 3.76 0.00 0.00 2.71
2926 3667 3.511699 CTGTCGAGCAGTAGCACAATTA 58.488 45.455 6.79 0.00 45.49 1.40
2990 3731 3.860536 GTCGAGCTCTGGTTAGTTCATTC 59.139 47.826 12.85 0.00 0.00 2.67
2993 3734 2.234908 AGCTCTGGTTAGTTCATTCGCT 59.765 45.455 0.00 0.00 0.00 4.93
3037 3778 7.944729 AAACCTACATAATGACTTCTGCAAT 57.055 32.000 0.00 0.00 0.00 3.56
3174 3915 9.515020 AAATTATACACAACACTCAACAACAAG 57.485 29.630 0.00 0.00 0.00 3.16
3214 3955 6.695713 TCGGATTATTGACTCGAATTACACAG 59.304 38.462 0.00 0.00 0.00 3.66
3234 3975 4.160626 ACAGTTGATAGAACTAGCCCTGAC 59.839 45.833 15.43 3.14 0.00 3.51
3248 3989 5.736951 AGCCCTGACATTTCTAGCTATAG 57.263 43.478 0.00 0.00 0.00 1.31
3265 4006 9.347934 CTAGCTATAGATAAAGGACATCAAACG 57.652 37.037 3.21 0.00 0.00 3.60
3279 4020 1.819288 TCAAACGCCTAGTCTCTCCTG 59.181 52.381 0.00 0.00 0.00 3.86
3337 4080 4.785511 TCAGTTACTCTGAGTTACCTGC 57.214 45.455 19.88 0.00 46.77 4.85
3369 4112 1.876156 GAAGCAGCATAATTCCTCCCG 59.124 52.381 0.00 0.00 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.868406 CCGATTTCGCTTATCCCAGC 59.132 55.000 0.00 0.00 38.18 4.85
1 2 0.868406 GCCGATTTCGCTTATCCCAG 59.132 55.000 0.00 0.00 38.18 4.45
11 12 1.052287 GTTGTTGCTTGCCGATTTCG 58.948 50.000 0.00 0.00 39.44 3.46
13 14 0.033366 GGGTTGTTGCTTGCCGATTT 59.967 50.000 0.00 0.00 0.00 2.17
23 24 4.079253 TCCTTCTCTATTTGGGTTGTTGC 58.921 43.478 0.00 0.00 0.00 4.17
79 80 5.296283 TCGTTGCTTCTATACTCACCTAGAC 59.704 44.000 0.00 0.00 0.00 2.59
86 87 6.377429 CCCCTATATCGTTGCTTCTATACTCA 59.623 42.308 0.00 0.00 0.00 3.41
92 93 4.087182 CCTCCCCTATATCGTTGCTTCTA 58.913 47.826 0.00 0.00 0.00 2.10
101 102 3.014304 TCCGATTCCTCCCCTATATCG 57.986 52.381 0.00 0.00 38.19 2.92
107 108 1.384643 CCCTTCCGATTCCTCCCCT 60.385 63.158 0.00 0.00 0.00 4.79
115 116 1.395826 CCGCTCTCTCCCTTCCGATT 61.396 60.000 0.00 0.00 0.00 3.34
132 133 1.617947 CCCCAGTTCTCCTTCTCCCG 61.618 65.000 0.00 0.00 0.00 5.14
167 168 2.270858 GATCTCCTCCCTAATTCCCCC 58.729 57.143 0.00 0.00 0.00 5.40
191 192 1.175983 CCTCCTTCGGATCTCCCTCG 61.176 65.000 0.00 0.00 0.00 4.63
197 198 1.571457 TCTTCCTCCTCCTTCGGATCT 59.429 52.381 0.00 0.00 31.43 2.75
198 199 1.684450 GTCTTCCTCCTCCTTCGGATC 59.316 57.143 0.00 0.00 31.43 3.36
199 200 1.783071 GTCTTCCTCCTCCTTCGGAT 58.217 55.000 0.00 0.00 31.43 4.18
200 201 0.680280 CGTCTTCCTCCTCCTTCGGA 60.680 60.000 0.00 0.00 0.00 4.55
201 202 0.680280 TCGTCTTCCTCCTCCTTCGG 60.680 60.000 0.00 0.00 0.00 4.30
203 204 1.546961 TGTCGTCTTCCTCCTCCTTC 58.453 55.000 0.00 0.00 0.00 3.46
204 205 1.896465 CTTGTCGTCTTCCTCCTCCTT 59.104 52.381 0.00 0.00 0.00 3.36
205 206 1.075698 TCTTGTCGTCTTCCTCCTCCT 59.924 52.381 0.00 0.00 0.00 3.69
220 221 0.320771 GCCGGTGACTGACATCTTGT 60.321 55.000 1.90 0.00 0.00 3.16
223 224 1.485124 TATGCCGGTGACTGACATCT 58.515 50.000 1.90 0.00 0.00 2.90
244 245 0.108329 ACTACCCTTGTCGATTGGCG 60.108 55.000 0.00 0.00 42.69 5.69
272 273 3.154710 GGTTTTGGACCTCGGAAAATCT 58.845 45.455 0.00 0.00 45.55 2.40
273 274 3.570926 GGTTTTGGACCTCGGAAAATC 57.429 47.619 0.00 0.00 45.55 2.17
376 379 9.298774 GTCGGTATATAAATGGCTTGTACTATC 57.701 37.037 0.00 0.00 0.00 2.08
424 427 7.753309 TCTTTGTGTAAAGGCTAGCATTTTA 57.247 32.000 29.85 21.86 42.81 1.52
492 495 4.579340 CAGGCATTGATGTCAAGCTTAGAT 59.421 41.667 0.00 0.00 39.47 1.98
506 509 0.770499 TGGGAAGTGACAGGCATTGA 59.230 50.000 0.00 0.00 0.00 2.57
522 525 0.395036 TTTGTGGTGGTGTCAGTGGG 60.395 55.000 0.00 0.00 0.00 4.61
525 528 2.507407 ACTTTTGTGGTGGTGTCAGT 57.493 45.000 0.00 0.00 0.00 3.41
613 617 3.021451 CCTTGAAGGTCCGCAAAGT 57.979 52.632 2.25 0.00 0.00 2.66
633 637 2.250031 TGGTTTTGCCATTGATGAGCT 58.750 42.857 0.00 0.00 43.61 4.09
666 670 6.513806 TCGGATGATGTCATTGTTTGATTT 57.486 33.333 0.00 0.00 36.54 2.17
672 676 3.125146 CGTGTTCGGATGATGTCATTGTT 59.875 43.478 0.00 0.00 36.57 2.83
675 679 1.665679 GCGTGTTCGGATGATGTCATT 59.334 47.619 0.00 0.00 35.63 2.57
677 681 0.739462 GGCGTGTTCGGATGATGTCA 60.739 55.000 0.00 0.00 37.56 3.58
679 683 0.107703 ATGGCGTGTTCGGATGATGT 60.108 50.000 0.00 0.00 37.56 3.06
682 686 0.036858 TTGATGGCGTGTTCGGATGA 60.037 50.000 0.00 0.00 37.56 2.92
685 689 0.250124 AGTTTGATGGCGTGTTCGGA 60.250 50.000 0.00 0.00 37.56 4.55
709 714 1.016130 GTCGTGTGATGGTGCCAGAG 61.016 60.000 0.00 0.00 0.00 3.35
719 724 4.755123 CCTCCAAAGTTTTAGTCGTGTGAT 59.245 41.667 0.00 0.00 0.00 3.06
732 738 5.077564 GGTATGGTTTTCTCCTCCAAAGTT 58.922 41.667 0.00 0.00 34.80 2.66
737 743 3.256704 ACAGGTATGGTTTTCTCCTCCA 58.743 45.455 0.00 0.00 35.64 3.86
763 769 0.180642 TGCTGGGTTTGTGGTTCGTA 59.819 50.000 0.00 0.00 0.00 3.43
785 791 7.776618 ATGTATCAATGGCATCTGAAATGAT 57.223 32.000 13.03 13.03 0.00 2.45
786 792 7.175467 GGTATGTATCAATGGCATCTGAAATGA 59.825 37.037 0.00 0.00 0.00 2.57
787 793 7.040271 TGGTATGTATCAATGGCATCTGAAATG 60.040 37.037 0.00 0.00 0.00 2.32
788 794 7.005902 TGGTATGTATCAATGGCATCTGAAAT 58.994 34.615 0.00 5.96 0.00 2.17
800 814 7.828508 AATGCAGATTGTGGTATGTATCAAT 57.171 32.000 0.00 0.00 33.95 2.57
802 816 6.459985 GCAAATGCAGATTGTGGTATGTATCA 60.460 38.462 14.39 0.00 41.59 2.15
809 823 4.395854 CAGTAGCAAATGCAGATTGTGGTA 59.604 41.667 14.39 1.11 45.16 3.25
824 839 4.077108 TCTCGAAGGTAGTTCAGTAGCAA 58.923 43.478 0.00 0.00 34.44 3.91
829 844 3.083293 GGAGTCTCGAAGGTAGTTCAGT 58.917 50.000 0.00 0.00 34.44 3.41
846 861 2.230508 TCGTATTTTCAGACTGCGGAGT 59.769 45.455 10.23 10.23 33.98 3.85
853 868 7.870954 TGAAATACACACTCGTATTTTCAGACT 59.129 33.333 9.67 0.00 46.84 3.24
859 1600 5.938125 AGCCTGAAATACACACTCGTATTTT 59.062 36.000 9.67 0.00 46.84 1.82
862 1603 4.081642 ACAGCCTGAAATACACACTCGTAT 60.082 41.667 0.00 0.00 33.43 3.06
867 1608 3.067106 CGAACAGCCTGAAATACACACT 58.933 45.455 0.00 0.00 0.00 3.55
875 1616 2.159382 GGAATTCCGAACAGCCTGAAA 58.841 47.619 9.17 0.00 0.00 2.69
876 1617 1.073125 TGGAATTCCGAACAGCCTGAA 59.927 47.619 19.57 0.00 39.43 3.02
877 1618 0.690192 TGGAATTCCGAACAGCCTGA 59.310 50.000 19.57 0.00 39.43 3.86
878 1619 0.804989 GTGGAATTCCGAACAGCCTG 59.195 55.000 19.57 0.00 39.43 4.85
879 1620 0.322546 GGTGGAATTCCGAACAGCCT 60.323 55.000 19.57 0.00 39.43 4.58
880 1621 0.608035 TGGTGGAATTCCGAACAGCC 60.608 55.000 19.57 13.64 39.43 4.85
881 1622 0.804989 CTGGTGGAATTCCGAACAGC 59.195 55.000 21.41 14.20 39.43 4.40
882 1623 0.804989 GCTGGTGGAATTCCGAACAG 59.195 55.000 25.58 25.58 39.43 3.16
883 1624 0.400213 AGCTGGTGGAATTCCGAACA 59.600 50.000 19.57 15.41 39.43 3.18
884 1625 1.087501 GAGCTGGTGGAATTCCGAAC 58.912 55.000 19.57 12.67 39.43 3.95
885 1626 0.035439 GGAGCTGGTGGAATTCCGAA 60.035 55.000 19.57 6.69 39.43 4.30
886 1627 1.198094 TGGAGCTGGTGGAATTCCGA 61.198 55.000 19.57 6.28 39.43 4.55
887 1628 1.026718 GTGGAGCTGGTGGAATTCCG 61.027 60.000 19.57 6.38 39.43 4.30
888 1629 1.026718 CGTGGAGCTGGTGGAATTCC 61.027 60.000 18.17 18.17 0.00 3.01
889 1630 0.036388 TCGTGGAGCTGGTGGAATTC 60.036 55.000 0.00 0.00 0.00 2.17
890 1631 0.400213 TTCGTGGAGCTGGTGGAATT 59.600 50.000 0.00 0.00 0.00 2.17
891 1632 0.400213 TTTCGTGGAGCTGGTGGAAT 59.600 50.000 0.00 0.00 0.00 3.01
892 1633 0.400213 ATTTCGTGGAGCTGGTGGAA 59.600 50.000 0.00 0.00 0.00 3.53
893 1634 0.400213 AATTTCGTGGAGCTGGTGGA 59.600 50.000 0.00 0.00 0.00 4.02
894 1635 0.804989 GAATTTCGTGGAGCTGGTGG 59.195 55.000 0.00 0.00 0.00 4.61
895 1636 1.466167 CTGAATTTCGTGGAGCTGGTG 59.534 52.381 0.00 0.00 0.00 4.17
896 1637 1.611673 CCTGAATTTCGTGGAGCTGGT 60.612 52.381 0.00 0.00 0.00 4.00
897 1638 1.089920 CCTGAATTTCGTGGAGCTGG 58.910 55.000 0.00 0.00 0.00 4.85
898 1639 2.099141 TCCTGAATTTCGTGGAGCTG 57.901 50.000 0.00 0.00 0.00 4.24
899 1640 2.859165 TTCCTGAATTTCGTGGAGCT 57.141 45.000 9.77 0.00 0.00 4.09
900 1641 4.496507 GCTATTTCCTGAATTTCGTGGAGC 60.497 45.833 9.77 7.37 0.00 4.70
901 1642 4.878397 AGCTATTTCCTGAATTTCGTGGAG 59.122 41.667 9.77 2.72 0.00 3.86
902 1643 4.635765 CAGCTATTTCCTGAATTTCGTGGA 59.364 41.667 6.80 6.80 32.03 4.02
903 1644 4.731773 GCAGCTATTTCCTGAATTTCGTGG 60.732 45.833 0.00 2.85 32.03 4.94
904 1645 4.095483 AGCAGCTATTTCCTGAATTTCGTG 59.905 41.667 0.00 0.00 32.03 4.35
905 1646 4.265073 AGCAGCTATTTCCTGAATTTCGT 58.735 39.130 0.00 0.00 32.03 3.85
906 1647 4.551603 CGAGCAGCTATTTCCTGAATTTCG 60.552 45.833 0.00 0.00 32.03 3.46
907 1648 4.787882 GCGAGCAGCTATTTCCTGAATTTC 60.788 45.833 0.00 0.00 44.04 2.17
908 1649 3.065925 GCGAGCAGCTATTTCCTGAATTT 59.934 43.478 0.00 0.00 44.04 1.82
909 1650 2.615912 GCGAGCAGCTATTTCCTGAATT 59.384 45.455 0.00 0.00 44.04 2.17
910 1651 2.216898 GCGAGCAGCTATTTCCTGAAT 58.783 47.619 0.00 0.00 44.04 2.57
911 1652 1.656652 GCGAGCAGCTATTTCCTGAA 58.343 50.000 0.00 0.00 44.04 3.02
912 1653 0.528466 CGCGAGCAGCTATTTCCTGA 60.528 55.000 0.00 0.00 45.59 3.86
913 1654 1.493950 CCGCGAGCAGCTATTTCCTG 61.494 60.000 8.23 0.00 45.59 3.86
914 1655 1.227380 CCGCGAGCAGCTATTTCCT 60.227 57.895 8.23 0.00 45.59 3.36
915 1656 1.090052 AACCGCGAGCAGCTATTTCC 61.090 55.000 8.23 0.00 45.59 3.13
916 1657 0.727398 AAACCGCGAGCAGCTATTTC 59.273 50.000 8.23 0.00 45.59 2.17
917 1658 1.130561 GAAAACCGCGAGCAGCTATTT 59.869 47.619 8.23 0.00 45.59 1.40
918 1659 0.727398 GAAAACCGCGAGCAGCTATT 59.273 50.000 8.23 0.00 45.59 1.73
919 1660 0.391130 TGAAAACCGCGAGCAGCTAT 60.391 50.000 8.23 0.00 45.59 2.97
920 1661 0.601576 TTGAAAACCGCGAGCAGCTA 60.602 50.000 8.23 0.00 45.59 3.32
921 1662 1.891919 TTGAAAACCGCGAGCAGCT 60.892 52.632 8.23 0.00 45.59 4.24
922 1663 1.725973 GTTGAAAACCGCGAGCAGC 60.726 57.895 8.23 0.00 42.21 5.25
923 1664 4.515107 GTTGAAAACCGCGAGCAG 57.485 55.556 8.23 0.00 42.21 4.24
933 1674 5.258051 AGTGGGTGAAGTTGTAGTTGAAAA 58.742 37.500 0.00 0.00 0.00 2.29
934 1675 4.850680 AGTGGGTGAAGTTGTAGTTGAAA 58.149 39.130 0.00 0.00 0.00 2.69
935 1676 4.497291 AGTGGGTGAAGTTGTAGTTGAA 57.503 40.909 0.00 0.00 0.00 2.69
936 1677 4.448210 GAAGTGGGTGAAGTTGTAGTTGA 58.552 43.478 0.00 0.00 0.00 3.18
937 1678 3.247648 CGAAGTGGGTGAAGTTGTAGTTG 59.752 47.826 0.00 0.00 0.00 3.16
938 1679 3.463944 CGAAGTGGGTGAAGTTGTAGTT 58.536 45.455 0.00 0.00 0.00 2.24
939 1680 2.224209 CCGAAGTGGGTGAAGTTGTAGT 60.224 50.000 0.00 0.00 0.00 2.73
940 1681 2.036733 TCCGAAGTGGGTGAAGTTGTAG 59.963 50.000 0.00 0.00 38.76 2.74
941 1682 2.040939 TCCGAAGTGGGTGAAGTTGTA 58.959 47.619 0.00 0.00 38.76 2.41
942 1683 0.834612 TCCGAAGTGGGTGAAGTTGT 59.165 50.000 0.00 0.00 38.76 3.32
943 1684 1.873591 CTTCCGAAGTGGGTGAAGTTG 59.126 52.381 0.00 0.00 38.76 3.16
944 1685 1.489230 ACTTCCGAAGTGGGTGAAGTT 59.511 47.619 13.12 0.00 43.54 2.66
945 1686 1.129058 ACTTCCGAAGTGGGTGAAGT 58.871 50.000 13.12 0.00 41.81 3.01
954 1695 1.202651 CCACAACTCCACTTCCGAAGT 60.203 52.381 8.03 8.03 44.06 3.01
955 1696 1.070134 TCCACAACTCCACTTCCGAAG 59.930 52.381 6.59 6.59 0.00 3.79
956 1697 1.070134 CTCCACAACTCCACTTCCGAA 59.930 52.381 0.00 0.00 0.00 4.30
957 1698 0.679505 CTCCACAACTCCACTTCCGA 59.320 55.000 0.00 0.00 0.00 4.55
958 1699 0.679505 TCTCCACAACTCCACTTCCG 59.320 55.000 0.00 0.00 0.00 4.30
959 1700 1.002544 CCTCTCCACAACTCCACTTCC 59.997 57.143 0.00 0.00 0.00 3.46
960 1701 1.002544 CCCTCTCCACAACTCCACTTC 59.997 57.143 0.00 0.00 0.00 3.01
961 1702 1.059913 CCCTCTCCACAACTCCACTT 58.940 55.000 0.00 0.00 0.00 3.16
962 1703 1.484444 GCCCTCTCCACAACTCCACT 61.484 60.000 0.00 0.00 0.00 4.00
963 1704 1.003233 GCCCTCTCCACAACTCCAC 60.003 63.158 0.00 0.00 0.00 4.02
964 1705 2.224159 GGCCCTCTCCACAACTCCA 61.224 63.158 0.00 0.00 0.00 3.86
965 1706 1.492993 AAGGCCCTCTCCACAACTCC 61.493 60.000 0.00 0.00 0.00 3.85
966 1707 0.035915 GAAGGCCCTCTCCACAACTC 60.036 60.000 0.00 0.00 0.00 3.01
967 1708 1.831652 CGAAGGCCCTCTCCACAACT 61.832 60.000 0.00 0.00 0.00 3.16
968 1709 1.376037 CGAAGGCCCTCTCCACAAC 60.376 63.158 0.00 0.00 0.00 3.32
969 1710 1.535444 TCGAAGGCCCTCTCCACAA 60.535 57.895 0.00 0.00 0.00 3.33
970 1711 1.984570 CTCGAAGGCCCTCTCCACA 60.985 63.158 0.00 0.00 0.00 4.17
971 1712 1.950973 GACTCGAAGGCCCTCTCCAC 61.951 65.000 0.00 0.00 0.00 4.02
972 1713 1.682684 GACTCGAAGGCCCTCTCCA 60.683 63.158 0.00 0.00 0.00 3.86
973 1714 2.776913 CGACTCGAAGGCCCTCTCC 61.777 68.421 0.00 0.00 0.00 3.71
974 1715 2.776913 CCGACTCGAAGGCCCTCTC 61.777 68.421 0.00 0.00 0.00 3.20
975 1716 2.756283 CCGACTCGAAGGCCCTCT 60.756 66.667 0.00 0.00 0.00 3.69
981 1722 1.227999 TTTGCTTGCCGACTCGAAGG 61.228 55.000 0.00 0.00 0.00 3.46
994 1735 4.120331 GGCTCCGCGCATTTGCTT 62.120 61.111 8.75 0.00 41.67 3.91
1041 1782 2.437359 CCTTGCCGGGAAGAGCTG 60.437 66.667 34.60 15.64 0.00 4.24
1080 1821 0.762418 TCAGGCGGGTGAAAAAGAGA 59.238 50.000 0.00 0.00 0.00 3.10
1320 2061 1.447838 GTCTCTCGCCGGCATTTCA 60.448 57.895 28.98 3.35 0.00 2.69
1563 2304 2.101380 GAGCCAGAGACGAGCGTC 59.899 66.667 14.65 14.65 44.86 5.19
1564 2305 3.805307 CGAGCCAGAGACGAGCGT 61.805 66.667 0.00 0.00 0.00 5.07
1669 2410 2.910199 TGCTGGCAAGATGCTACTAAG 58.090 47.619 0.00 0.00 44.28 2.18
1846 2587 1.301716 TCACGGTGCTCCTTTCTGC 60.302 57.895 2.51 0.00 0.00 4.26
1996 2737 2.584608 GACCATGCCACCGTAGCT 59.415 61.111 0.00 0.00 0.00 3.32
2155 2896 2.435059 GAAGCAGTCGGGCTCCAC 60.435 66.667 0.00 0.00 45.07 4.02
2310 3051 1.495584 GAACGTCGTTCTGCTTGCCA 61.496 55.000 26.86 0.00 39.23 4.92
2329 3070 5.532406 TCTTCACCAACCTTTTGATCTTGAG 59.468 40.000 0.00 0.00 34.24 3.02
2369 3110 2.111878 AGCTGCAACCGTCAAGCT 59.888 55.556 1.02 0.00 0.00 3.74
2410 3151 3.126858 TGCTTTTAGCCTGCTTATCGTTG 59.873 43.478 0.00 0.00 41.51 4.10
2411 3152 3.343617 TGCTTTTAGCCTGCTTATCGTT 58.656 40.909 0.00 0.00 41.51 3.85
2424 3165 9.871238 TGAAGGTTCTACTAGTAATGCTTTTAG 57.129 33.333 3.76 0.00 0.00 1.85
2426 3167 9.569122 TTTGAAGGTTCTACTAGTAATGCTTTT 57.431 29.630 3.76 0.00 0.00 2.27
2427 3168 9.000486 GTTTGAAGGTTCTACTAGTAATGCTTT 58.000 33.333 3.76 0.00 0.00 3.51
2428 3169 7.606839 GGTTTGAAGGTTCTACTAGTAATGCTT 59.393 37.037 3.76 0.00 0.00 3.91
2429 3170 7.038231 AGGTTTGAAGGTTCTACTAGTAATGCT 60.038 37.037 3.76 0.00 0.00 3.79
2430 3171 7.104290 AGGTTTGAAGGTTCTACTAGTAATGC 58.896 38.462 3.76 0.00 0.00 3.56
2431 3172 9.152595 GAAGGTTTGAAGGTTCTACTAGTAATG 57.847 37.037 3.76 0.00 0.00 1.90
2432 3173 8.877195 TGAAGGTTTGAAGGTTCTACTAGTAAT 58.123 33.333 3.76 0.00 0.00 1.89
2433 3174 8.146412 GTGAAGGTTTGAAGGTTCTACTAGTAA 58.854 37.037 3.76 0.00 0.00 2.24
2434 3175 7.508296 AGTGAAGGTTTGAAGGTTCTACTAGTA 59.492 37.037 1.89 1.89 0.00 1.82
2435 3176 6.326843 AGTGAAGGTTTGAAGGTTCTACTAGT 59.673 38.462 0.00 0.00 0.00 2.57
2436 3177 6.760291 AGTGAAGGTTTGAAGGTTCTACTAG 58.240 40.000 0.00 0.00 0.00 2.57
2437 3178 6.742559 AGTGAAGGTTTGAAGGTTCTACTA 57.257 37.500 0.00 0.00 0.00 1.82
2438 3179 5.632034 AGTGAAGGTTTGAAGGTTCTACT 57.368 39.130 0.00 0.00 0.00 2.57
2439 3180 5.408909 GCTAGTGAAGGTTTGAAGGTTCTAC 59.591 44.000 0.00 0.00 0.00 2.59
2440 3181 5.071250 TGCTAGTGAAGGTTTGAAGGTTCTA 59.929 40.000 0.00 0.00 0.00 2.10
2441 3182 4.141482 TGCTAGTGAAGGTTTGAAGGTTCT 60.141 41.667 0.00 0.00 0.00 3.01
2442 3183 4.134563 TGCTAGTGAAGGTTTGAAGGTTC 58.865 43.478 0.00 0.00 0.00 3.62
2443 3184 4.164843 TGCTAGTGAAGGTTTGAAGGTT 57.835 40.909 0.00 0.00 0.00 3.50
2444 3185 3.857157 TGCTAGTGAAGGTTTGAAGGT 57.143 42.857 0.00 0.00 0.00 3.50
2445 3186 5.712152 AAATGCTAGTGAAGGTTTGAAGG 57.288 39.130 0.00 0.00 0.00 3.46
2446 3187 7.809806 CCTTAAAATGCTAGTGAAGGTTTGAAG 59.190 37.037 0.00 0.00 30.84 3.02
2447 3188 7.255801 CCCTTAAAATGCTAGTGAAGGTTTGAA 60.256 37.037 0.00 0.00 33.09 2.69
2448 3189 6.208599 CCCTTAAAATGCTAGTGAAGGTTTGA 59.791 38.462 0.00 0.00 33.09 2.69
2449 3190 6.015434 ACCCTTAAAATGCTAGTGAAGGTTTG 60.015 38.462 0.00 0.00 33.09 2.93
2450 3191 6.075315 ACCCTTAAAATGCTAGTGAAGGTTT 58.925 36.000 0.00 0.00 33.09 3.27
2451 3192 5.641155 ACCCTTAAAATGCTAGTGAAGGTT 58.359 37.500 0.00 0.00 33.09 3.50
2452 3193 5.254115 GACCCTTAAAATGCTAGTGAAGGT 58.746 41.667 0.00 0.00 33.09 3.50
2453 3194 4.640647 GGACCCTTAAAATGCTAGTGAAGG 59.359 45.833 0.00 0.00 34.46 3.46
2454 3195 5.253330 TGGACCCTTAAAATGCTAGTGAAG 58.747 41.667 0.00 0.00 0.00 3.02
2455 3196 5.249780 TGGACCCTTAAAATGCTAGTGAA 57.750 39.130 0.00 0.00 0.00 3.18
2456 3197 4.919774 TGGACCCTTAAAATGCTAGTGA 57.080 40.909 0.00 0.00 0.00 3.41
2457 3198 5.975693 TTTGGACCCTTAAAATGCTAGTG 57.024 39.130 0.00 0.00 0.00 2.74
2458 3199 6.987403 TTTTTGGACCCTTAAAATGCTAGT 57.013 33.333 0.00 0.00 0.00 2.57
2461 3202 9.806448 AAATTATTTTTGGACCCTTAAAATGCT 57.194 25.926 14.54 4.45 34.39 3.79
2492 3233 9.418045 CCTGTTTTTCAATCCGTAAAAATGTAT 57.582 29.630 0.00 0.00 37.04 2.29
2493 3234 7.868415 CCCTGTTTTTCAATCCGTAAAAATGTA 59.132 33.333 0.00 0.00 37.04 2.29
2494 3235 6.704050 CCCTGTTTTTCAATCCGTAAAAATGT 59.296 34.615 0.00 0.00 37.04 2.71
2495 3236 6.926272 TCCCTGTTTTTCAATCCGTAAAAATG 59.074 34.615 0.00 0.00 37.04 2.32
2496 3237 6.926826 GTCCCTGTTTTTCAATCCGTAAAAAT 59.073 34.615 0.00 0.00 37.04 1.82
2497 3238 6.127423 TGTCCCTGTTTTTCAATCCGTAAAAA 60.127 34.615 0.00 0.00 33.41 1.94
2498 3239 5.360144 TGTCCCTGTTTTTCAATCCGTAAAA 59.640 36.000 0.00 0.00 0.00 1.52
2499 3240 4.888239 TGTCCCTGTTTTTCAATCCGTAAA 59.112 37.500 0.00 0.00 0.00 2.01
2500 3241 4.462133 TGTCCCTGTTTTTCAATCCGTAA 58.538 39.130 0.00 0.00 0.00 3.18
2501 3242 4.088056 TGTCCCTGTTTTTCAATCCGTA 57.912 40.909 0.00 0.00 0.00 4.02
2502 3243 2.938838 TGTCCCTGTTTTTCAATCCGT 58.061 42.857 0.00 0.00 0.00 4.69
2503 3244 4.037446 TCTTTGTCCCTGTTTTTCAATCCG 59.963 41.667 0.00 0.00 0.00 4.18
2504 3245 5.529581 TCTTTGTCCCTGTTTTTCAATCC 57.470 39.130 0.00 0.00 0.00 3.01
2505 3246 8.576442 TCTAATCTTTGTCCCTGTTTTTCAATC 58.424 33.333 0.00 0.00 0.00 2.67
2506 3247 8.477419 TCTAATCTTTGTCCCTGTTTTTCAAT 57.523 30.769 0.00 0.00 0.00 2.57
2507 3248 7.889873 TCTAATCTTTGTCCCTGTTTTTCAA 57.110 32.000 0.00 0.00 0.00 2.69
2508 3249 7.559897 AGTTCTAATCTTTGTCCCTGTTTTTCA 59.440 33.333 0.00 0.00 0.00 2.69
2509 3250 7.941919 AGTTCTAATCTTTGTCCCTGTTTTTC 58.058 34.615 0.00 0.00 0.00 2.29
2510 3251 7.780271 AGAGTTCTAATCTTTGTCCCTGTTTTT 59.220 33.333 0.00 0.00 0.00 1.94
2511 3252 7.290813 AGAGTTCTAATCTTTGTCCCTGTTTT 58.709 34.615 0.00 0.00 0.00 2.43
2512 3253 6.842676 AGAGTTCTAATCTTTGTCCCTGTTT 58.157 36.000 0.00 0.00 0.00 2.83
2513 3254 6.043243 TGAGAGTTCTAATCTTTGTCCCTGTT 59.957 38.462 0.00 0.00 0.00 3.16
2514 3255 5.544176 TGAGAGTTCTAATCTTTGTCCCTGT 59.456 40.000 0.00 0.00 0.00 4.00
2515 3256 6.042638 TGAGAGTTCTAATCTTTGTCCCTG 57.957 41.667 0.00 0.00 0.00 4.45
2516 3257 6.688073 TTGAGAGTTCTAATCTTTGTCCCT 57.312 37.500 0.00 0.00 0.00 4.20
2517 3258 6.149640 GGTTTGAGAGTTCTAATCTTTGTCCC 59.850 42.308 0.00 0.00 0.00 4.46
2518 3259 6.149640 GGGTTTGAGAGTTCTAATCTTTGTCC 59.850 42.308 0.00 0.00 0.00 4.02
2519 3260 6.710744 TGGGTTTGAGAGTTCTAATCTTTGTC 59.289 38.462 0.00 0.00 0.00 3.18
2520 3261 6.601332 TGGGTTTGAGAGTTCTAATCTTTGT 58.399 36.000 0.00 0.00 0.00 2.83
2521 3262 7.363431 GTTGGGTTTGAGAGTTCTAATCTTTG 58.637 38.462 0.00 0.00 0.00 2.77
2522 3263 6.490381 GGTTGGGTTTGAGAGTTCTAATCTTT 59.510 38.462 0.00 0.00 0.00 2.52
2523 3264 6.004574 GGTTGGGTTTGAGAGTTCTAATCTT 58.995 40.000 0.00 0.00 0.00 2.40
2524 3265 5.515008 GGGTTGGGTTTGAGAGTTCTAATCT 60.515 44.000 0.00 0.00 0.00 2.40
2525 3266 4.700692 GGGTTGGGTTTGAGAGTTCTAATC 59.299 45.833 0.00 0.00 0.00 1.75
2526 3267 4.354087 AGGGTTGGGTTTGAGAGTTCTAAT 59.646 41.667 0.00 0.00 0.00 1.73
2527 3268 3.720002 AGGGTTGGGTTTGAGAGTTCTAA 59.280 43.478 0.00 0.00 0.00 2.10
2528 3269 3.323775 AGGGTTGGGTTTGAGAGTTCTA 58.676 45.455 0.00 0.00 0.00 2.10
2529 3270 2.136026 AGGGTTGGGTTTGAGAGTTCT 58.864 47.619 0.00 0.00 0.00 3.01
2530 3271 2.658807 AGGGTTGGGTTTGAGAGTTC 57.341 50.000 0.00 0.00 0.00 3.01
2531 3272 4.741928 ATAAGGGTTGGGTTTGAGAGTT 57.258 40.909 0.00 0.00 0.00 3.01
2532 3273 5.073965 TGTTATAAGGGTTGGGTTTGAGAGT 59.926 40.000 0.00 0.00 0.00 3.24
2533 3274 5.566469 TGTTATAAGGGTTGGGTTTGAGAG 58.434 41.667 0.00 0.00 0.00 3.20
2534 3275 5.586155 TGTTATAAGGGTTGGGTTTGAGA 57.414 39.130 0.00 0.00 0.00 3.27
2535 3276 7.948034 TTATGTTATAAGGGTTGGGTTTGAG 57.052 36.000 0.00 0.00 0.00 3.02
2541 3282 9.462606 GGAGAATATTATGTTATAAGGGTTGGG 57.537 37.037 0.00 0.00 0.00 4.12
2551 3292 9.140286 CGTCGTTCATGGAGAATATTATGTTAT 57.860 33.333 0.00 0.00 38.76 1.89
2552 3293 8.139350 ACGTCGTTCATGGAGAATATTATGTTA 58.861 33.333 0.00 0.00 38.76 2.41
2553 3294 6.984474 ACGTCGTTCATGGAGAATATTATGTT 59.016 34.615 0.00 0.00 38.76 2.71
2554 3295 6.513180 ACGTCGTTCATGGAGAATATTATGT 58.487 36.000 0.00 0.00 38.76 2.29
2555 3296 7.042725 ACAACGTCGTTCATGGAGAATATTATG 60.043 37.037 7.86 0.00 38.76 1.90
2556 3297 6.984474 ACAACGTCGTTCATGGAGAATATTAT 59.016 34.615 7.86 0.00 38.76 1.28
2557 3298 6.334989 ACAACGTCGTTCATGGAGAATATTA 58.665 36.000 7.86 0.00 38.76 0.98
2558 3299 5.175859 ACAACGTCGTTCATGGAGAATATT 58.824 37.500 7.86 0.00 38.76 1.28
2559 3300 4.755411 ACAACGTCGTTCATGGAGAATAT 58.245 39.130 7.86 0.00 38.76 1.28
2560 3301 4.171005 GACAACGTCGTTCATGGAGAATA 58.829 43.478 7.86 0.00 38.76 1.75
2561 3302 2.993899 GACAACGTCGTTCATGGAGAAT 59.006 45.455 7.86 0.00 38.76 2.40
2562 3303 2.400399 GACAACGTCGTTCATGGAGAA 58.600 47.619 7.86 0.00 0.00 2.87
2563 3304 2.060326 GACAACGTCGTTCATGGAGA 57.940 50.000 7.86 0.00 0.00 3.71
2618 3359 4.208686 CTGCTAGTCGCCCCCGTC 62.209 72.222 0.00 0.00 38.05 4.79
2652 3393 4.452733 CTCCCAACTCCCGCGTCC 62.453 72.222 4.92 0.00 0.00 4.79
2653 3394 4.452733 CCTCCCAACTCCCGCGTC 62.453 72.222 4.92 0.00 0.00 5.19
2655 3396 2.536997 AAATCCTCCCAACTCCCGCG 62.537 60.000 0.00 0.00 0.00 6.46
2656 3397 0.323451 AAAATCCTCCCAACTCCCGC 60.323 55.000 0.00 0.00 0.00 6.13
2657 3398 2.092323 GAAAAATCCTCCCAACTCCCG 58.908 52.381 0.00 0.00 0.00 5.14
2658 3399 2.457598 GGAAAAATCCTCCCAACTCCC 58.542 52.381 0.00 0.00 0.00 4.30
2677 3418 2.558286 TTATACTCGCGCGGGAGGG 61.558 63.158 43.26 28.40 46.83 4.30
2678 3419 1.371389 GTTATACTCGCGCGGGAGG 60.371 63.158 43.26 29.96 38.39 4.30
2679 3420 1.371389 GGTTATACTCGCGCGGGAG 60.371 63.158 40.95 40.95 39.97 4.30
2680 3421 2.723746 GGTTATACTCGCGCGGGA 59.276 61.111 39.76 25.06 0.00 5.14
2681 3422 2.728383 CGGTTATACTCGCGCGGG 60.728 66.667 31.23 31.23 0.00 6.13
2682 3423 3.392440 GCGGTTATACTCGCGCGG 61.392 66.667 31.69 22.52 42.48 6.46
2687 3428 2.800544 CCTCATTTGGCGGTTATACTCG 59.199 50.000 0.00 0.00 0.00 4.18
2688 3429 3.139077 CCCTCATTTGGCGGTTATACTC 58.861 50.000 0.00 0.00 0.00 2.59
2689 3430 2.508300 ACCCTCATTTGGCGGTTATACT 59.492 45.455 0.00 0.00 0.00 2.12
2690 3431 2.927028 ACCCTCATTTGGCGGTTATAC 58.073 47.619 0.00 0.00 0.00 1.47
2691 3432 3.283751 CAACCCTCATTTGGCGGTTATA 58.716 45.455 0.00 0.00 36.45 0.98
2692 3433 2.099405 CAACCCTCATTTGGCGGTTAT 58.901 47.619 0.00 0.00 36.45 1.89
2693 3434 1.540267 CAACCCTCATTTGGCGGTTA 58.460 50.000 0.00 0.00 36.45 2.85
2694 3435 1.184970 CCAACCCTCATTTGGCGGTT 61.185 55.000 0.00 0.00 37.31 4.44
2695 3436 1.606313 CCAACCCTCATTTGGCGGT 60.606 57.895 0.00 0.00 37.31 5.68
2696 3437 2.350458 CCCAACCCTCATTTGGCGG 61.350 63.158 0.00 0.00 42.06 6.13
2697 3438 0.684153 ATCCCAACCCTCATTTGGCG 60.684 55.000 0.00 0.00 42.06 5.69
2698 3439 2.310538 CTATCCCAACCCTCATTTGGC 58.689 52.381 0.00 0.00 42.06 4.52
2699 3440 2.244769 ACCTATCCCAACCCTCATTTGG 59.755 50.000 0.00 0.00 42.90 3.28
2700 3441 3.669939 ACCTATCCCAACCCTCATTTG 57.330 47.619 0.00 0.00 0.00 2.32
2701 3442 4.692523 AAACCTATCCCAACCCTCATTT 57.307 40.909 0.00 0.00 0.00 2.32
2702 3443 4.352893 CAAAACCTATCCCAACCCTCATT 58.647 43.478 0.00 0.00 0.00 2.57
2703 3444 3.881713 GCAAAACCTATCCCAACCCTCAT 60.882 47.826 0.00 0.00 0.00 2.90
2704 3445 2.556559 GCAAAACCTATCCCAACCCTCA 60.557 50.000 0.00 0.00 0.00 3.86
2705 3446 2.100197 GCAAAACCTATCCCAACCCTC 58.900 52.381 0.00 0.00 0.00 4.30
2706 3447 1.716503 AGCAAAACCTATCCCAACCCT 59.283 47.619 0.00 0.00 0.00 4.34
2707 3448 2.100197 GAGCAAAACCTATCCCAACCC 58.900 52.381 0.00 0.00 0.00 4.11
2708 3449 2.100197 GGAGCAAAACCTATCCCAACC 58.900 52.381 0.00 0.00 0.00 3.77
2713 3454 2.100197 GTTGGGGAGCAAAACCTATCC 58.900 52.381 0.00 0.00 0.00 2.59
2714 3455 2.100197 GGTTGGGGAGCAAAACCTATC 58.900 52.381 0.00 0.00 40.22 2.08
2715 3456 1.273041 GGGTTGGGGAGCAAAACCTAT 60.273 52.381 4.00 0.00 42.50 2.57
2716 3457 0.113580 GGGTTGGGGAGCAAAACCTA 59.886 55.000 4.00 0.00 42.50 3.08
2717 3458 1.152333 GGGTTGGGGAGCAAAACCT 60.152 57.895 4.00 0.00 42.50 3.50
2718 3459 0.762842 AAGGGTTGGGGAGCAAAACC 60.763 55.000 0.00 0.00 42.21 3.27
2719 3460 1.616865 GTAAGGGTTGGGGAGCAAAAC 59.383 52.381 0.00 0.00 0.00 2.43
2720 3461 1.501604 AGTAAGGGTTGGGGAGCAAAA 59.498 47.619 0.00 0.00 0.00 2.44
2721 3462 1.154430 AGTAAGGGTTGGGGAGCAAA 58.846 50.000 0.00 0.00 0.00 3.68
2722 3463 1.154430 AAGTAAGGGTTGGGGAGCAA 58.846 50.000 0.00 0.00 0.00 3.91
2723 3464 1.154430 AAAGTAAGGGTTGGGGAGCA 58.846 50.000 0.00 0.00 0.00 4.26
2724 3465 1.893137 CAAAAGTAAGGGTTGGGGAGC 59.107 52.381 0.00 0.00 0.00 4.70
2725 3466 3.421844 CTCAAAAGTAAGGGTTGGGGAG 58.578 50.000 0.00 0.00 0.00 4.30
2726 3467 2.109304 CCTCAAAAGTAAGGGTTGGGGA 59.891 50.000 0.00 0.00 44.39 4.81
2727 3468 2.109304 TCCTCAAAAGTAAGGGTTGGGG 59.891 50.000 0.00 0.00 43.21 4.96
2728 3469 3.518992 TCCTCAAAAGTAAGGGTTGGG 57.481 47.619 0.00 0.00 33.21 4.12
2729 3470 5.391312 CAATCCTCAAAAGTAAGGGTTGG 57.609 43.478 6.52 0.00 45.94 3.77
2731 3472 4.107311 TCCCAATCCTCAAAAGTAAGGGTT 59.893 41.667 0.00 0.00 36.39 4.11
2732 3473 3.660669 TCCCAATCCTCAAAAGTAAGGGT 59.339 43.478 0.00 0.00 35.31 4.34
2733 3474 4.316025 TCCCAATCCTCAAAAGTAAGGG 57.684 45.455 0.00 0.00 33.21 3.95
2734 3475 5.185828 CCTTTCCCAATCCTCAAAAGTAAGG 59.814 44.000 0.00 0.00 0.00 2.69
2735 3476 5.185828 CCCTTTCCCAATCCTCAAAAGTAAG 59.814 44.000 0.00 0.00 0.00 2.34
2736 3477 5.083821 CCCTTTCCCAATCCTCAAAAGTAA 58.916 41.667 0.00 0.00 0.00 2.24
2737 3478 4.107311 ACCCTTTCCCAATCCTCAAAAGTA 59.893 41.667 0.00 0.00 0.00 2.24
2738 3479 3.116746 ACCCTTTCCCAATCCTCAAAAGT 60.117 43.478 0.00 0.00 0.00 2.66
2739 3480 3.510459 ACCCTTTCCCAATCCTCAAAAG 58.490 45.455 0.00 0.00 0.00 2.27
2740 3481 3.628832 ACCCTTTCCCAATCCTCAAAA 57.371 42.857 0.00 0.00 0.00 2.44
2741 3482 3.628832 AACCCTTTCCCAATCCTCAAA 57.371 42.857 0.00 0.00 0.00 2.69
2742 3483 3.116939 TCAAACCCTTTCCCAATCCTCAA 60.117 43.478 0.00 0.00 0.00 3.02
2743 3484 2.448961 TCAAACCCTTTCCCAATCCTCA 59.551 45.455 0.00 0.00 0.00 3.86
2744 3485 3.092301 CTCAAACCCTTTCCCAATCCTC 58.908 50.000 0.00 0.00 0.00 3.71
2745 3486 2.225369 CCTCAAACCCTTTCCCAATCCT 60.225 50.000 0.00 0.00 0.00 3.24
2746 3487 2.179427 CCTCAAACCCTTTCCCAATCC 58.821 52.381 0.00 0.00 0.00 3.01
2747 3488 3.169512 TCCTCAAACCCTTTCCCAATC 57.830 47.619 0.00 0.00 0.00 2.67
2748 3489 3.840078 CAATCCTCAAACCCTTTCCCAAT 59.160 43.478 0.00 0.00 0.00 3.16
2749 3490 3.238597 CAATCCTCAAACCCTTTCCCAA 58.761 45.455 0.00 0.00 0.00 4.12
2750 3491 2.492567 CCAATCCTCAAACCCTTTCCCA 60.493 50.000 0.00 0.00 0.00 4.37
2751 3492 2.179427 CCAATCCTCAAACCCTTTCCC 58.821 52.381 0.00 0.00 0.00 3.97
2752 3493 2.826128 GTCCAATCCTCAAACCCTTTCC 59.174 50.000 0.00 0.00 0.00 3.13
2753 3494 3.767711 AGTCCAATCCTCAAACCCTTTC 58.232 45.455 0.00 0.00 0.00 2.62
2754 3495 3.903530 AGTCCAATCCTCAAACCCTTT 57.096 42.857 0.00 0.00 0.00 3.11
2755 3496 3.903530 AAGTCCAATCCTCAAACCCTT 57.096 42.857 0.00 0.00 0.00 3.95
2756 3497 3.903530 AAAGTCCAATCCTCAAACCCT 57.096 42.857 0.00 0.00 0.00 4.34
2757 3498 6.413783 TTTAAAAGTCCAATCCTCAAACCC 57.586 37.500 0.00 0.00 0.00 4.11
2780 3521 5.708736 AACCCTCAAACCCTCAAATTTTT 57.291 34.783 0.00 0.00 0.00 1.94
2781 3522 6.183361 CCTTAACCCTCAAACCCTCAAATTTT 60.183 38.462 0.00 0.00 0.00 1.82
2782 3523 5.306937 CCTTAACCCTCAAACCCTCAAATTT 59.693 40.000 0.00 0.00 0.00 1.82
2783 3524 4.838423 CCTTAACCCTCAAACCCTCAAATT 59.162 41.667 0.00 0.00 0.00 1.82
2784 3525 4.416516 CCTTAACCCTCAAACCCTCAAAT 58.583 43.478 0.00 0.00 0.00 2.32
2785 3526 3.437344 CCCTTAACCCTCAAACCCTCAAA 60.437 47.826 0.00 0.00 0.00 2.69
2786 3527 2.109304 CCCTTAACCCTCAAACCCTCAA 59.891 50.000 0.00 0.00 0.00 3.02
2787 3528 1.708551 CCCTTAACCCTCAAACCCTCA 59.291 52.381 0.00 0.00 0.00 3.86
2788 3529 1.005569 CCCCTTAACCCTCAAACCCTC 59.994 57.143 0.00 0.00 0.00 4.30
2789 3530 1.081481 CCCCTTAACCCTCAAACCCT 58.919 55.000 0.00 0.00 0.00 4.34
2790 3531 0.781920 ACCCCTTAACCCTCAAACCC 59.218 55.000 0.00 0.00 0.00 4.11
2791 3532 2.109480 AGAACCCCTTAACCCTCAAACC 59.891 50.000 0.00 0.00 0.00 3.27
2792 3533 3.520691 AGAACCCCTTAACCCTCAAAC 57.479 47.619 0.00 0.00 0.00 2.93
2793 3534 4.245308 ACTAGAACCCCTTAACCCTCAAA 58.755 43.478 0.00 0.00 0.00 2.69
2794 3535 3.842436 GACTAGAACCCCTTAACCCTCAA 59.158 47.826 0.00 0.00 0.00 3.02
2795 3536 3.078612 AGACTAGAACCCCTTAACCCTCA 59.921 47.826 0.00 0.00 0.00 3.86
2796 3537 3.722172 AGACTAGAACCCCTTAACCCTC 58.278 50.000 0.00 0.00 0.00 4.30
2797 3538 3.868476 AGACTAGAACCCCTTAACCCT 57.132 47.619 0.00 0.00 0.00 4.34
2798 3539 3.382865 CGTAGACTAGAACCCCTTAACCC 59.617 52.174 0.00 0.00 0.00 4.11
2799 3540 3.382865 CCGTAGACTAGAACCCCTTAACC 59.617 52.174 0.00 0.00 0.00 2.85
2800 3541 3.181482 GCCGTAGACTAGAACCCCTTAAC 60.181 52.174 0.00 0.00 0.00 2.01
2801 3542 3.026694 GCCGTAGACTAGAACCCCTTAA 58.973 50.000 0.00 0.00 0.00 1.85
2802 3543 2.243221 AGCCGTAGACTAGAACCCCTTA 59.757 50.000 0.00 0.00 0.00 2.69
2803 3544 1.006878 AGCCGTAGACTAGAACCCCTT 59.993 52.381 0.00 0.00 0.00 3.95
2804 3545 0.630134 AGCCGTAGACTAGAACCCCT 59.370 55.000 0.00 0.00 0.00 4.79
2805 3546 1.482954 AAGCCGTAGACTAGAACCCC 58.517 55.000 0.00 0.00 0.00 4.95
2806 3547 3.606595 AAAAGCCGTAGACTAGAACCC 57.393 47.619 0.00 0.00 0.00 4.11
2845 3586 9.607988 CTCAAACCCCTAAAAATAACTGTTTTT 57.392 29.630 0.00 0.00 42.25 1.94
2846 3587 8.208224 CCTCAAACCCCTAAAAATAACTGTTTT 58.792 33.333 0.00 0.00 32.94 2.43
2847 3588 7.202056 CCCTCAAACCCCTAAAAATAACTGTTT 60.202 37.037 0.00 0.00 0.00 2.83
2848 3589 6.269077 CCCTCAAACCCCTAAAAATAACTGTT 59.731 38.462 0.00 0.00 0.00 3.16
2849 3590 5.778241 CCCTCAAACCCCTAAAAATAACTGT 59.222 40.000 0.00 0.00 0.00 3.55
2850 3591 5.337250 GCCCTCAAACCCCTAAAAATAACTG 60.337 44.000 0.00 0.00 0.00 3.16
2851 3592 4.775780 GCCCTCAAACCCCTAAAAATAACT 59.224 41.667 0.00 0.00 0.00 2.24
2852 3593 4.775780 AGCCCTCAAACCCCTAAAAATAAC 59.224 41.667 0.00 0.00 0.00 1.89
2853 3594 5.018374 AGCCCTCAAACCCCTAAAAATAA 57.982 39.130 0.00 0.00 0.00 1.40
2854 3595 4.293901 AGAGCCCTCAAACCCCTAAAAATA 59.706 41.667 0.00 0.00 0.00 1.40
2855 3596 3.077543 AGAGCCCTCAAACCCCTAAAAAT 59.922 43.478 0.00 0.00 0.00 1.82
2856 3597 2.449345 AGAGCCCTCAAACCCCTAAAAA 59.551 45.455 0.00 0.00 0.00 1.94
2857 3598 2.070573 AGAGCCCTCAAACCCCTAAAA 58.929 47.619 0.00 0.00 0.00 1.52
2858 3599 1.755200 AGAGCCCTCAAACCCCTAAA 58.245 50.000 0.00 0.00 0.00 1.85
2859 3600 2.193993 GTAGAGCCCTCAAACCCCTAA 58.806 52.381 0.00 0.00 0.00 2.69
2860 3601 1.365028 AGTAGAGCCCTCAAACCCCTA 59.635 52.381 0.00 0.00 0.00 3.53
2861 3602 0.119358 AGTAGAGCCCTCAAACCCCT 59.881 55.000 0.00 0.00 0.00 4.79
2862 3603 1.763545 CTAGTAGAGCCCTCAAACCCC 59.236 57.143 0.00 0.00 0.00 4.95
2863 3604 2.468915 ACTAGTAGAGCCCTCAAACCC 58.531 52.381 3.59 0.00 0.00 4.11
2864 3605 5.128991 ACATTACTAGTAGAGCCCTCAAACC 59.871 44.000 3.59 0.00 0.00 3.27
2865 3606 6.223351 ACATTACTAGTAGAGCCCTCAAAC 57.777 41.667 3.59 0.00 0.00 2.93
2866 3607 6.668283 AGAACATTACTAGTAGAGCCCTCAAA 59.332 38.462 3.59 0.00 0.00 2.69
2867 3608 6.195700 AGAACATTACTAGTAGAGCCCTCAA 58.804 40.000 3.59 0.00 0.00 3.02
2868 3609 5.767670 AGAACATTACTAGTAGAGCCCTCA 58.232 41.667 3.59 0.00 0.00 3.86
2869 3610 7.284944 TGTTAGAACATTACTAGTAGAGCCCTC 59.715 40.741 3.59 0.00 33.17 4.30
2870 3611 7.124052 TGTTAGAACATTACTAGTAGAGCCCT 58.876 38.462 3.59 2.74 33.17 5.19
2871 3612 7.344095 TGTTAGAACATTACTAGTAGAGCCC 57.656 40.000 3.59 0.00 33.17 5.19
2886 3627 4.388485 ACAGTGCACATGATGTTAGAACA 58.612 39.130 21.04 0.00 44.06 3.18
2887 3628 4.434725 CGACAGTGCACATGATGTTAGAAC 60.435 45.833 21.04 1.44 0.00 3.01
2888 3629 3.679502 CGACAGTGCACATGATGTTAGAA 59.320 43.478 21.04 0.00 0.00 2.10
2889 3630 3.056891 TCGACAGTGCACATGATGTTAGA 60.057 43.478 21.04 14.09 0.00 2.10
2926 3667 0.255604 TTCCCACGCCATGATCACAT 59.744 50.000 0.00 0.00 37.19 3.21
2966 3707 2.826128 TGAACTAACCAGAGCTCGACAT 59.174 45.455 8.37 0.00 0.00 3.06
2990 3731 1.446272 GAAAGGAGGTGACGGAGCG 60.446 63.158 0.00 0.00 0.00 5.03
2993 3734 0.761323 TGTGGAAAGGAGGTGACGGA 60.761 55.000 0.00 0.00 0.00 4.69
3174 3915 4.657436 AATCCGAGTCTGAAGTGGTATC 57.343 45.455 0.00 0.00 0.00 2.24
3214 3955 4.737855 TGTCAGGGCTAGTTCTATCAAC 57.262 45.455 0.00 0.00 0.00 3.18
3248 3989 5.116882 ACTAGGCGTTTGATGTCCTTTATC 58.883 41.667 0.00 0.00 0.00 1.75
3265 4006 1.133407 CGTGAACAGGAGAGACTAGGC 59.867 57.143 0.00 0.00 0.00 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.