Multiple sequence alignment - TraesCS4A01G095100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G095100 chr4A 100.000 3051 0 0 1 3051 103392298 103389248 0.000000e+00 5635.0
1 TraesCS4A01G095100 chr4A 96.364 55 1 1 2483 2537 569482937 569482990 4.190000e-14 89.8
2 TraesCS4A01G095100 chr4B 93.013 1603 60 19 858 2449 446853109 446854670 0.000000e+00 2292.0
3 TraesCS4A01G095100 chr4B 96.386 249 9 0 2549 2797 446854698 446854946 7.870000e-111 411.0
4 TraesCS4A01G095100 chr4D 92.862 1597 58 27 864 2449 361595067 361596618 0.000000e+00 2266.0
5 TraesCS4A01G095100 chr4D 91.149 531 33 9 2530 3051 361596662 361597187 0.000000e+00 708.0
6 TraesCS4A01G095100 chr5D 95.663 784 30 1 4 787 14105501 14106280 0.000000e+00 1256.0
7 TraesCS4A01G095100 chr5D 95.141 782 34 1 4 785 503129556 503128779 0.000000e+00 1230.0
8 TraesCS4A01G095100 chr5D 91.349 786 64 1 1 786 330401145 330401926 0.000000e+00 1072.0
9 TraesCS4A01G095100 chr1D 94.911 786 30 4 1 786 103476080 103475305 0.000000e+00 1221.0
10 TraesCS4A01G095100 chr1D 92.857 56 2 1 2482 2537 62888753 62888700 2.520000e-11 80.5
11 TraesCS4A01G095100 chr6D 92.748 786 50 4 1 786 203750225 203749447 0.000000e+00 1129.0
12 TraesCS4A01G095100 chr6A 90.967 786 67 1 1 786 537033860 537034641 0.000000e+00 1055.0
13 TraesCS4A01G095100 chr7B 88.471 798 83 5 1 796 620997331 620996541 0.000000e+00 955.0
14 TraesCS4A01G095100 chr7B 86.962 790 96 3 1 789 74819826 74820609 0.000000e+00 881.0
15 TraesCS4A01G095100 chr7D 87.831 756 91 1 1 755 186631185 186631940 0.000000e+00 885.0
16 TraesCS4A01G095100 chr7D 90.625 64 4 1 2479 2542 8879465 8879526 1.950000e-12 84.2
17 TraesCS4A01G095100 chr7A 96.491 57 1 1 2483 2538 116616016 116615960 3.240000e-15 93.5
18 TraesCS4A01G095100 chr5A 93.220 59 2 2 2481 2537 665078665 665078723 5.420000e-13 86.1
19 TraesCS4A01G095100 chr3D 93.333 60 1 1 2481 2537 435451317 435451258 5.420000e-13 86.1
20 TraesCS4A01G095100 chr2D 93.220 59 3 1 2480 2537 311556714 311556772 5.420000e-13 86.1
21 TraesCS4A01G095100 chr2D 92.857 56 2 2 2482 2537 29227433 29227486 2.520000e-11 80.5
22 TraesCS4A01G095100 chr1B 94.643 56 1 1 2482 2537 579608067 579608120 5.420000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G095100 chr4A 103389248 103392298 3050 True 5635.0 5635 100.0000 1 3051 1 chr4A.!!$R1 3050
1 TraesCS4A01G095100 chr4B 446853109 446854946 1837 False 1351.5 2292 94.6995 858 2797 2 chr4B.!!$F1 1939
2 TraesCS4A01G095100 chr4D 361595067 361597187 2120 False 1487.0 2266 92.0055 864 3051 2 chr4D.!!$F1 2187
3 TraesCS4A01G095100 chr5D 14105501 14106280 779 False 1256.0 1256 95.6630 4 787 1 chr5D.!!$F1 783
4 TraesCS4A01G095100 chr5D 503128779 503129556 777 True 1230.0 1230 95.1410 4 785 1 chr5D.!!$R1 781
5 TraesCS4A01G095100 chr5D 330401145 330401926 781 False 1072.0 1072 91.3490 1 786 1 chr5D.!!$F2 785
6 TraesCS4A01G095100 chr1D 103475305 103476080 775 True 1221.0 1221 94.9110 1 786 1 chr1D.!!$R2 785
7 TraesCS4A01G095100 chr6D 203749447 203750225 778 True 1129.0 1129 92.7480 1 786 1 chr6D.!!$R1 785
8 TraesCS4A01G095100 chr6A 537033860 537034641 781 False 1055.0 1055 90.9670 1 786 1 chr6A.!!$F1 785
9 TraesCS4A01G095100 chr7B 620996541 620997331 790 True 955.0 955 88.4710 1 796 1 chr7B.!!$R1 795
10 TraesCS4A01G095100 chr7B 74819826 74820609 783 False 881.0 881 86.9620 1 789 1 chr7B.!!$F1 788
11 TraesCS4A01G095100 chr7D 186631185 186631940 755 False 885.0 885 87.8310 1 755 1 chr7D.!!$F2 754

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
599 605 0.107081 TTTTGAGAACTCGGCGGGAA 59.893 50.0 16.65 0.0 0.00 3.97 F
808 814 0.551396 CCCTTTTTAGGGGCGGAGAT 59.449 55.0 2.11 0.0 45.34 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1887 1920 0.037882 ATGAGGCAGACACACACGAG 60.038 55.0 0.0 0.0 0.0 4.18 R
2753 2809 0.037326 GTCTGAGGATGACGCAACCA 60.037 55.0 8.4 0.0 0.0 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
233 234 1.118965 TTCACTCCAAGGAGGCGTCA 61.119 55.000 19.62 0.00 45.88 4.35
404 407 1.606531 GATCTGCTTCCCAGGTGCT 59.393 57.895 6.15 0.00 42.05 4.40
595 601 0.440371 GAGCTTTTGAGAACTCGGCG 59.560 55.000 0.00 0.00 0.00 6.46
599 605 0.107081 TTTTGAGAACTCGGCGGGAA 59.893 50.000 16.65 0.00 0.00 3.97
617 623 4.202050 CGGGAATTCAAAATCTCATGGGTC 60.202 45.833 7.93 0.00 0.00 4.46
657 663 0.938008 GGCGCATGGTTTAGCTAGAC 59.062 55.000 10.83 5.86 0.00 2.59
673 679 1.978617 GACAGGGGGTGTGCAATGG 60.979 63.158 0.00 0.00 40.56 3.16
724 730 8.650490 TCCAGACTGCATTATTCATATTGTAGA 58.350 33.333 11.49 0.00 33.51 2.59
752 758 4.617253 GGTCCCAACCTTTGCTTAATTT 57.383 40.909 0.00 0.00 42.80 1.82
753 759 5.731957 GGTCCCAACCTTTGCTTAATTTA 57.268 39.130 0.00 0.00 42.80 1.40
754 760 6.104146 GGTCCCAACCTTTGCTTAATTTAA 57.896 37.500 0.00 0.00 42.80 1.52
755 761 6.526526 GGTCCCAACCTTTGCTTAATTTAAA 58.473 36.000 0.00 0.00 42.80 1.52
806 812 4.657952 CCCTTTTTAGGGGCGGAG 57.342 61.111 2.11 0.00 45.34 4.63
807 813 1.996086 CCCTTTTTAGGGGCGGAGA 59.004 57.895 2.11 0.00 45.34 3.71
808 814 0.551396 CCCTTTTTAGGGGCGGAGAT 59.449 55.000 2.11 0.00 45.34 2.75
809 815 1.772453 CCCTTTTTAGGGGCGGAGATA 59.228 52.381 2.11 0.00 45.34 1.98
810 816 2.375509 CCCTTTTTAGGGGCGGAGATAT 59.624 50.000 2.11 0.00 45.34 1.63
811 817 3.181433 CCCTTTTTAGGGGCGGAGATATT 60.181 47.826 2.11 0.00 45.34 1.28
812 818 4.470602 CCTTTTTAGGGGCGGAGATATTT 58.529 43.478 0.00 0.00 0.00 1.40
813 819 5.457052 CCCTTTTTAGGGGCGGAGATATTTA 60.457 44.000 2.11 0.00 45.34 1.40
814 820 6.246163 CCTTTTTAGGGGCGGAGATATTTAT 58.754 40.000 0.00 0.00 0.00 1.40
815 821 7.399634 CCTTTTTAGGGGCGGAGATATTTATA 58.600 38.462 0.00 0.00 0.00 0.98
816 822 8.053355 CCTTTTTAGGGGCGGAGATATTTATAT 58.947 37.037 0.00 0.00 0.00 0.86
818 824 9.895138 TTTTTAGGGGCGGAGATATTTATATAC 57.105 33.333 0.00 0.00 0.00 1.47
819 825 7.607615 TTAGGGGCGGAGATATTTATATACC 57.392 40.000 0.00 0.00 0.00 2.73
820 826 4.587684 AGGGGCGGAGATATTTATATACCG 59.412 45.833 16.48 16.48 41.39 4.02
821 827 4.343239 GGGGCGGAGATATTTATATACCGT 59.657 45.833 19.30 0.00 40.98 4.83
822 828 5.536161 GGGGCGGAGATATTTATATACCGTA 59.464 44.000 19.30 0.00 40.98 4.02
823 829 6.040842 GGGGCGGAGATATTTATATACCGTAA 59.959 42.308 19.30 0.00 40.98 3.18
824 830 7.417797 GGGGCGGAGATATTTATATACCGTAAA 60.418 40.741 19.30 0.00 40.98 2.01
825 831 7.981225 GGGCGGAGATATTTATATACCGTAAAA 59.019 37.037 19.30 0.00 40.98 1.52
826 832 8.811378 GGCGGAGATATTTATATACCGTAAAAC 58.189 37.037 19.30 9.48 40.98 2.43
827 833 9.357652 GCGGAGATATTTATATACCGTAAAACA 57.642 33.333 19.30 0.00 40.98 2.83
836 842 8.613060 TTATATACCGTAAAACAAACACCACA 57.387 30.769 0.00 0.00 0.00 4.17
837 843 5.831702 ATACCGTAAAACAAACACCACAA 57.168 34.783 0.00 0.00 0.00 3.33
838 844 3.835779 ACCGTAAAACAAACACCACAAC 58.164 40.909 0.00 0.00 0.00 3.32
839 845 3.255149 ACCGTAAAACAAACACCACAACA 59.745 39.130 0.00 0.00 0.00 3.33
840 846 3.854809 CCGTAAAACAAACACCACAACAG 59.145 43.478 0.00 0.00 0.00 3.16
841 847 4.379603 CCGTAAAACAAACACCACAACAGA 60.380 41.667 0.00 0.00 0.00 3.41
842 848 5.336744 CGTAAAACAAACACCACAACAGAT 58.663 37.500 0.00 0.00 0.00 2.90
843 849 5.802956 CGTAAAACAAACACCACAACAGATT 59.197 36.000 0.00 0.00 0.00 2.40
844 850 6.967767 CGTAAAACAAACACCACAACAGATTA 59.032 34.615 0.00 0.00 0.00 1.75
845 851 7.044576 CGTAAAACAAACACCACAACAGATTAC 60.045 37.037 0.00 0.00 0.00 1.89
846 852 6.524101 AAACAAACACCACAACAGATTACT 57.476 33.333 0.00 0.00 0.00 2.24
848 854 5.189928 ACAAACACCACAACAGATTACTGA 58.810 37.500 0.00 0.00 46.03 3.41
849 855 5.827797 ACAAACACCACAACAGATTACTGAT 59.172 36.000 0.00 0.00 46.03 2.90
850 856 6.995686 ACAAACACCACAACAGATTACTGATA 59.004 34.615 0.00 0.00 46.03 2.15
851 857 7.665559 ACAAACACCACAACAGATTACTGATAT 59.334 33.333 0.00 0.00 46.03 1.63
852 858 8.514594 CAAACACCACAACAGATTACTGATATT 58.485 33.333 0.00 0.00 46.03 1.28
853 859 9.733556 AAACACCACAACAGATTACTGATATTA 57.266 29.630 0.00 0.00 46.03 0.98
854 860 8.718102 ACACCACAACAGATTACTGATATTAC 57.282 34.615 0.00 0.00 46.03 1.89
855 861 7.769044 ACACCACAACAGATTACTGATATTACC 59.231 37.037 0.00 0.00 46.03 2.85
856 862 7.226720 CACCACAACAGATTACTGATATTACCC 59.773 40.741 0.00 0.00 46.03 3.69
1014 1028 2.882137 CAGTTGCGGTTAAAAGGAAGGA 59.118 45.455 0.00 0.00 0.00 3.36
1015 1029 3.316868 CAGTTGCGGTTAAAAGGAAGGAA 59.683 43.478 0.00 0.00 0.00 3.36
1016 1030 3.955551 AGTTGCGGTTAAAAGGAAGGAAA 59.044 39.130 0.00 0.00 0.00 3.13
1017 1031 4.037565 AGTTGCGGTTAAAAGGAAGGAAAG 59.962 41.667 0.00 0.00 0.00 2.62
1018 1032 2.888414 TGCGGTTAAAAGGAAGGAAAGG 59.112 45.455 0.00 0.00 0.00 3.11
1019 1033 3.151554 GCGGTTAAAAGGAAGGAAAGGA 58.848 45.455 0.00 0.00 0.00 3.36
1163 1177 0.735471 CACGAGATTGCGGAGAGAGA 59.265 55.000 0.00 0.00 35.12 3.10
1164 1178 1.021202 ACGAGATTGCGGAGAGAGAG 58.979 55.000 0.00 0.00 35.12 3.20
1165 1179 1.304254 CGAGATTGCGGAGAGAGAGA 58.696 55.000 0.00 0.00 0.00 3.10
1166 1180 1.264020 CGAGATTGCGGAGAGAGAGAG 59.736 57.143 0.00 0.00 0.00 3.20
1167 1181 2.571212 GAGATTGCGGAGAGAGAGAGA 58.429 52.381 0.00 0.00 0.00 3.10
1168 1182 2.948979 GAGATTGCGGAGAGAGAGAGAA 59.051 50.000 0.00 0.00 0.00 2.87
1169 1183 2.951642 AGATTGCGGAGAGAGAGAGAAG 59.048 50.000 0.00 0.00 0.00 2.85
1170 1184 2.498644 TTGCGGAGAGAGAGAGAAGA 57.501 50.000 0.00 0.00 0.00 2.87
1171 1185 2.498644 TGCGGAGAGAGAGAGAAGAA 57.501 50.000 0.00 0.00 0.00 2.52
1172 1186 2.364632 TGCGGAGAGAGAGAGAAGAAG 58.635 52.381 0.00 0.00 0.00 2.85
1173 1187 2.026729 TGCGGAGAGAGAGAGAAGAAGA 60.027 50.000 0.00 0.00 0.00 2.87
1174 1188 3.013921 GCGGAGAGAGAGAGAAGAAGAA 58.986 50.000 0.00 0.00 0.00 2.52
1175 1189 3.065371 GCGGAGAGAGAGAGAAGAAGAAG 59.935 52.174 0.00 0.00 0.00 2.85
1176 1190 4.513442 CGGAGAGAGAGAGAAGAAGAAGA 58.487 47.826 0.00 0.00 0.00 2.87
1177 1191 4.941263 CGGAGAGAGAGAGAAGAAGAAGAA 59.059 45.833 0.00 0.00 0.00 2.52
1178 1192 5.065218 CGGAGAGAGAGAGAAGAAGAAGAAG 59.935 48.000 0.00 0.00 0.00 2.85
1179 1193 6.180472 GGAGAGAGAGAGAAGAAGAAGAAGA 58.820 44.000 0.00 0.00 0.00 2.87
1288 1315 1.451028 GAGGTGCTAGGCTGCAAGG 60.451 63.158 12.13 0.00 45.12 3.61
1564 1591 3.936203 ACGGCTTCAGCAACGGGA 61.936 61.111 0.30 0.00 44.36 5.14
1637 1664 2.654404 GGCTATGACGACGCCGAC 60.654 66.667 0.00 0.00 39.50 4.79
1639 1666 3.017314 CTATGACGACGCCGACGC 61.017 66.667 9.15 2.82 45.53 5.19
1640 1667 4.541482 TATGACGACGCCGACGCC 62.541 66.667 9.15 0.00 45.53 5.68
1656 1683 2.046700 CCTACGCCCGCTTCCAAA 60.047 61.111 0.00 0.00 0.00 3.28
1844 1876 2.357517 CAAGGCTTCGCGGTGACT 60.358 61.111 6.13 3.62 0.00 3.41
1845 1877 2.357517 AAGGCTTCGCGGTGACTG 60.358 61.111 6.13 0.00 0.00 3.51
1907 1940 0.319813 TCGTGTGTGTCTGCCTCATG 60.320 55.000 0.00 0.00 0.00 3.07
2043 2076 8.006298 ACTGGTCATTCTCAATTGTAAAACAA 57.994 30.769 5.13 0.00 42.95 2.83
2089 2122 1.406887 CCCCAATGTCCCTCGTTGTAG 60.407 57.143 0.00 0.00 40.36 2.74
2128 2161 0.318699 CTGCAGAAGGAACGTCGACA 60.319 55.000 17.16 0.00 42.91 4.35
2131 2164 1.009389 CAGAAGGAACGTCGACAGGC 61.009 60.000 17.16 3.13 42.91 4.85
2132 2165 1.006571 GAAGGAACGTCGACAGGCA 60.007 57.895 17.16 0.00 0.00 4.75
2134 2167 2.432628 GGAACGTCGACAGGCAGG 60.433 66.667 17.16 0.00 0.00 4.85
2135 2168 3.112709 GAACGTCGACAGGCAGGC 61.113 66.667 17.16 0.00 0.00 4.85
2136 2169 4.681978 AACGTCGACAGGCAGGCC 62.682 66.667 17.16 0.97 0.00 5.19
2138 2171 4.680237 CGTCGACAGGCAGGCCAA 62.680 66.667 17.16 0.00 38.92 4.52
2140 2173 4.329545 TCGACAGGCAGGCCAACC 62.330 66.667 13.63 5.55 38.92 3.77
2175 2211 0.179043 TGCCTAACCAGTCGTTGCAA 60.179 50.000 0.00 0.00 32.20 4.08
2186 2222 2.802816 AGTCGTTGCAATGTCAGACTTC 59.197 45.455 17.94 0.00 35.70 3.01
2248 2284 7.532571 TCAGAATTCAAAGTAATCATGCACAG 58.467 34.615 8.44 0.00 0.00 3.66
2269 2305 2.533266 CCTTTCATTTCATTGCTCCGC 58.467 47.619 0.00 0.00 0.00 5.54
2321 2357 7.348274 AGAGGAACATGGTGATCTTAAATAGGA 59.652 37.037 0.00 0.00 0.00 2.94
2485 2539 4.587684 TGCATACTAGGCTAAGGGAACTAC 59.412 45.833 0.00 0.00 42.68 2.73
2486 2540 4.833938 GCATACTAGGCTAAGGGAACTACT 59.166 45.833 0.00 0.00 42.68 2.57
2487 2541 5.047872 GCATACTAGGCTAAGGGAACTACTC 60.048 48.000 0.00 0.00 42.68 2.59
2488 2542 3.913509 ACTAGGCTAAGGGAACTACTCC 58.086 50.000 0.00 0.00 42.68 3.85
2498 2552 3.797451 GGAACTACTCCCTCCGTAAAG 57.203 52.381 0.00 0.00 38.44 1.85
2499 2553 3.359950 GGAACTACTCCCTCCGTAAAGA 58.640 50.000 0.00 0.00 38.44 2.52
2500 2554 3.766051 GGAACTACTCCCTCCGTAAAGAA 59.234 47.826 0.00 0.00 38.44 2.52
2501 2555 4.221482 GGAACTACTCCCTCCGTAAAGAAA 59.779 45.833 0.00 0.00 38.44 2.52
2502 2556 5.105023 GGAACTACTCCCTCCGTAAAGAAAT 60.105 44.000 0.00 0.00 38.44 2.17
2503 2557 6.097412 GGAACTACTCCCTCCGTAAAGAAATA 59.903 42.308 0.00 0.00 38.44 1.40
2504 2558 7.201983 GGAACTACTCCCTCCGTAAAGAAATAT 60.202 40.741 0.00 0.00 38.44 1.28
2505 2559 8.773033 AACTACTCCCTCCGTAAAGAAATATA 57.227 34.615 0.00 0.00 0.00 0.86
2506 2560 8.773033 ACTACTCCCTCCGTAAAGAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
2507 2561 8.858094 ACTACTCCCTCCGTAAAGAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
2508 2562 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
2509 2563 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
2510 2564 7.564292 ACTCCCTCCGTAAAGAAATATAAGAGT 59.436 37.037 0.00 0.00 0.00 3.24
2511 2565 7.723324 TCCCTCCGTAAAGAAATATAAGAGTG 58.277 38.462 0.00 0.00 0.00 3.51
2512 2566 7.343833 TCCCTCCGTAAAGAAATATAAGAGTGT 59.656 37.037 0.00 0.00 0.00 3.55
2513 2567 7.985752 CCCTCCGTAAAGAAATATAAGAGTGTT 59.014 37.037 0.00 0.00 0.00 3.32
2514 2568 9.379791 CCTCCGTAAAGAAATATAAGAGTGTTT 57.620 33.333 0.00 0.00 0.00 2.83
2531 2585 8.458573 AGAGTGTTTAGATCACTATACAGAGG 57.541 38.462 0.00 0.00 44.68 3.69
2532 2586 7.504238 AGAGTGTTTAGATCACTATACAGAGGG 59.496 40.741 0.00 0.00 44.68 4.30
2533 2587 7.355101 AGTGTTTAGATCACTATACAGAGGGA 58.645 38.462 0.00 0.00 43.17 4.20
2534 2588 7.504238 AGTGTTTAGATCACTATACAGAGGGAG 59.496 40.741 0.00 0.00 43.17 4.30
2535 2589 7.285858 GTGTTTAGATCACTATACAGAGGGAGT 59.714 40.741 0.00 0.00 39.71 3.85
2536 2590 8.500238 TGTTTAGATCACTATACAGAGGGAGTA 58.500 37.037 0.00 0.00 36.30 2.59
2537 2591 9.523168 GTTTAGATCACTATACAGAGGGAGTAT 57.477 37.037 0.00 0.00 30.69 2.12
2538 2592 9.742144 TTTAGATCACTATACAGAGGGAGTATC 57.258 37.037 0.00 0.00 30.69 2.24
2589 2643 1.412343 TGCAGCTGTCTTGACAGTGTA 59.588 47.619 25.57 19.40 39.76 2.90
2655 2709 3.372206 CCCTTCTGTACTCAATTTCAGCG 59.628 47.826 0.00 0.00 0.00 5.18
2658 2712 3.585862 TCTGTACTCAATTTCAGCGTCC 58.414 45.455 0.00 0.00 0.00 4.79
2728 2784 3.242867 AGAGATATTTCATCCCTCGCCA 58.757 45.455 0.00 0.00 0.00 5.69
2753 2809 2.224523 TGAAAGGATGGCAGTCTTTCGT 60.225 45.455 25.95 7.40 45.37 3.85
2788 2844 1.377202 GACAGATGCCCCGCTTTCA 60.377 57.895 0.00 0.00 0.00 2.69
2803 2859 3.616379 CGCTTTCATTCCTGAGAGAAGTC 59.384 47.826 0.00 0.00 36.03 3.01
2804 2860 4.573900 GCTTTCATTCCTGAGAGAAGTCA 58.426 43.478 0.00 0.00 36.03 3.41
2824 2880 6.064717 AGTCAATTAAGGACATCATTAGGGC 58.935 40.000 11.36 0.00 37.74 5.19
2854 2910 5.567423 GCAAATCAAAATCTGGGTGTAGCTT 60.567 40.000 0.00 0.00 0.00 3.74
2884 2940 5.593909 TGATGAAAGACATTTGTGTTCAGGT 59.406 36.000 10.47 0.00 39.56 4.00
2889 2945 6.377327 AAGACATTTGTGTTCAGGTTACAG 57.623 37.500 0.00 0.00 0.00 2.74
2931 2987 4.685169 ATTACTGAACAATTGGTCTGCG 57.315 40.909 25.26 15.60 34.54 5.18
2958 3019 7.228906 CAGCAGTTCATGGAGATCTAAATGATT 59.771 37.037 16.60 8.70 35.14 2.57
2987 3048 9.529325 TCTGGTAAATCAAGATATAACAGAACG 57.471 33.333 0.00 0.00 0.00 3.95
2988 3049 8.657074 TGGTAAATCAAGATATAACAGAACGG 57.343 34.615 0.00 0.00 0.00 4.44
3005 3066 1.971695 GGGCTGGGGTGAAAAGTCG 60.972 63.158 0.00 0.00 0.00 4.18
3009 3070 0.109723 CTGGGGTGAAAAGTCGGGAA 59.890 55.000 0.00 0.00 0.00 3.97
3010 3071 0.774908 TGGGGTGAAAAGTCGGGAAT 59.225 50.000 0.00 0.00 0.00 3.01
3011 3072 1.146152 TGGGGTGAAAAGTCGGGAATT 59.854 47.619 0.00 0.00 0.00 2.17
3012 3073 2.244695 GGGGTGAAAAGTCGGGAATTT 58.755 47.619 0.00 0.00 0.00 1.82
3013 3074 2.029380 GGGGTGAAAAGTCGGGAATTTG 60.029 50.000 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
233 234 0.678048 GTCGCCTTGGCTCCTTGATT 60.678 55.000 10.12 0.00 0.00 2.57
445 449 1.448985 AGTAATCGCCATTTGCACGT 58.551 45.000 0.00 0.00 41.33 4.49
480 484 4.014406 TGACTATCTAGCTCAACGTGGAA 58.986 43.478 0.00 0.00 0.00 3.53
494 498 1.967274 GCCACCACCTCCTGACTATCT 60.967 57.143 0.00 0.00 0.00 1.98
595 601 4.100035 GGACCCATGAGATTTTGAATTCCC 59.900 45.833 2.27 0.00 0.00 3.97
599 605 3.290710 CCGGACCCATGAGATTTTGAAT 58.709 45.455 0.00 0.00 0.00 2.57
657 663 0.680921 CTACCATTGCACACCCCCTG 60.681 60.000 0.00 0.00 0.00 4.45
752 758 9.095700 AGGGGAACTTGCAACTTTATTTATTTA 57.904 29.630 0.00 0.00 0.00 1.40
753 759 7.973402 AGGGGAACTTGCAACTTTATTTATTT 58.027 30.769 0.00 0.00 0.00 1.40
754 760 7.553504 AGGGGAACTTGCAACTTTATTTATT 57.446 32.000 0.00 0.00 0.00 1.40
755 761 8.658840 TTAGGGGAACTTGCAACTTTATTTAT 57.341 30.769 0.00 0.00 0.00 1.40
790 796 3.790089 ATATCTCCGCCCCTAAAAAGG 57.210 47.619 0.00 0.00 0.00 3.11
794 800 7.201938 CGGTATATAAATATCTCCGCCCCTAAA 60.202 40.741 11.05 0.00 35.41 1.85
795 801 6.266103 CGGTATATAAATATCTCCGCCCCTAA 59.734 42.308 11.05 0.00 35.41 2.69
796 802 5.771666 CGGTATATAAATATCTCCGCCCCTA 59.228 44.000 11.05 0.00 35.41 3.53
797 803 4.587684 CGGTATATAAATATCTCCGCCCCT 59.412 45.833 11.05 0.00 35.41 4.79
798 804 4.343239 ACGGTATATAAATATCTCCGCCCC 59.657 45.833 18.16 0.00 40.57 5.80
799 805 5.526506 ACGGTATATAAATATCTCCGCCC 57.473 43.478 18.16 0.00 40.57 6.13
800 806 8.811378 GTTTTACGGTATATAAATATCTCCGCC 58.189 37.037 18.16 0.00 40.57 6.13
801 807 9.357652 TGTTTTACGGTATATAAATATCTCCGC 57.642 33.333 18.16 8.71 40.57 5.54
810 816 9.060347 TGTGGTGTTTGTTTTACGGTATATAAA 57.940 29.630 0.00 0.00 0.00 1.40
811 817 8.613060 TGTGGTGTTTGTTTTACGGTATATAA 57.387 30.769 0.00 0.00 0.00 0.98
812 818 8.502387 GTTGTGGTGTTTGTTTTACGGTATATA 58.498 33.333 0.00 0.00 0.00 0.86
813 819 7.013083 TGTTGTGGTGTTTGTTTTACGGTATAT 59.987 33.333 0.00 0.00 0.00 0.86
814 820 6.317140 TGTTGTGGTGTTTGTTTTACGGTATA 59.683 34.615 0.00 0.00 0.00 1.47
815 821 5.125097 TGTTGTGGTGTTTGTTTTACGGTAT 59.875 36.000 0.00 0.00 0.00 2.73
816 822 4.456911 TGTTGTGGTGTTTGTTTTACGGTA 59.543 37.500 0.00 0.00 0.00 4.02
817 823 3.255149 TGTTGTGGTGTTTGTTTTACGGT 59.745 39.130 0.00 0.00 0.00 4.83
818 824 3.834610 TGTTGTGGTGTTTGTTTTACGG 58.165 40.909 0.00 0.00 0.00 4.02
819 825 4.724303 TCTGTTGTGGTGTTTGTTTTACG 58.276 39.130 0.00 0.00 0.00 3.18
820 826 7.971722 AGTAATCTGTTGTGGTGTTTGTTTTAC 59.028 33.333 0.00 0.00 0.00 2.01
821 827 7.971168 CAGTAATCTGTTGTGGTGTTTGTTTTA 59.029 33.333 0.00 0.00 36.97 1.52
822 828 6.811170 CAGTAATCTGTTGTGGTGTTTGTTTT 59.189 34.615 0.00 0.00 36.97 2.43
823 829 6.151985 TCAGTAATCTGTTGTGGTGTTTGTTT 59.848 34.615 0.00 0.00 41.91 2.83
824 830 5.650266 TCAGTAATCTGTTGTGGTGTTTGTT 59.350 36.000 0.00 0.00 41.91 2.83
825 831 5.189928 TCAGTAATCTGTTGTGGTGTTTGT 58.810 37.500 0.00 0.00 41.91 2.83
826 832 5.749596 TCAGTAATCTGTTGTGGTGTTTG 57.250 39.130 0.00 0.00 41.91 2.93
827 833 8.635765 AATATCAGTAATCTGTTGTGGTGTTT 57.364 30.769 0.00 0.00 41.91 2.83
828 834 9.162764 GTAATATCAGTAATCTGTTGTGGTGTT 57.837 33.333 0.00 0.00 41.91 3.32
829 835 7.769044 GGTAATATCAGTAATCTGTTGTGGTGT 59.231 37.037 0.00 0.00 41.91 4.16
830 836 7.226720 GGGTAATATCAGTAATCTGTTGTGGTG 59.773 40.741 0.00 0.00 41.91 4.17
831 837 7.127339 AGGGTAATATCAGTAATCTGTTGTGGT 59.873 37.037 0.00 0.00 41.91 4.16
832 838 7.509546 AGGGTAATATCAGTAATCTGTTGTGG 58.490 38.462 0.00 0.00 41.91 4.17
872 878 6.015504 CGTCTTGAAACGTTGGAAATATCAG 58.984 40.000 0.00 0.00 37.86 2.90
933 939 3.562635 CACGGTTTCGGGCTTCTC 58.437 61.111 0.00 0.00 41.39 2.87
991 1005 1.681538 TCCTTTTAACCGCAACTGCA 58.318 45.000 2.12 0.00 42.21 4.41
1014 1028 2.740506 TCGGTGGTTCCTTTTCCTTT 57.259 45.000 0.00 0.00 0.00 3.11
1015 1029 2.691526 GTTTCGGTGGTTCCTTTTCCTT 59.308 45.455 0.00 0.00 0.00 3.36
1016 1030 2.304092 GTTTCGGTGGTTCCTTTTCCT 58.696 47.619 0.00 0.00 0.00 3.36
1017 1031 1.002142 CGTTTCGGTGGTTCCTTTTCC 60.002 52.381 0.00 0.00 0.00 3.13
1018 1032 1.598676 GCGTTTCGGTGGTTCCTTTTC 60.599 52.381 0.00 0.00 0.00 2.29
1019 1033 0.382873 GCGTTTCGGTGGTTCCTTTT 59.617 50.000 0.00 0.00 0.00 2.27
1155 1169 6.180472 TCTTCTTCTTCTTCTCTCTCTCTCC 58.820 44.000 0.00 0.00 0.00 3.71
1163 1177 8.477419 TCTTCTTCTTCTTCTTCTTCTTCTCT 57.523 34.615 0.00 0.00 0.00 3.10
1164 1178 7.329471 GCTCTTCTTCTTCTTCTTCTTCTTCTC 59.671 40.741 0.00 0.00 0.00 2.87
1165 1179 7.154656 GCTCTTCTTCTTCTTCTTCTTCTTCT 58.845 38.462 0.00 0.00 0.00 2.85
1166 1180 6.089417 CGCTCTTCTTCTTCTTCTTCTTCTTC 59.911 42.308 0.00 0.00 0.00 2.87
1167 1181 5.925969 CGCTCTTCTTCTTCTTCTTCTTCTT 59.074 40.000 0.00 0.00 0.00 2.52
1168 1182 5.469479 CGCTCTTCTTCTTCTTCTTCTTCT 58.531 41.667 0.00 0.00 0.00 2.85
1169 1183 4.091365 GCGCTCTTCTTCTTCTTCTTCTTC 59.909 45.833 0.00 0.00 0.00 2.87
1170 1184 3.993736 GCGCTCTTCTTCTTCTTCTTCTT 59.006 43.478 0.00 0.00 0.00 2.52
1171 1185 3.584834 GCGCTCTTCTTCTTCTTCTTCT 58.415 45.455 0.00 0.00 0.00 2.85
1172 1186 2.344142 CGCGCTCTTCTTCTTCTTCTTC 59.656 50.000 5.56 0.00 0.00 2.87
1173 1187 2.029828 TCGCGCTCTTCTTCTTCTTCTT 60.030 45.455 5.56 0.00 0.00 2.52
1174 1188 1.542030 TCGCGCTCTTCTTCTTCTTCT 59.458 47.619 5.56 0.00 0.00 2.85
1175 1189 1.983972 TCGCGCTCTTCTTCTTCTTC 58.016 50.000 5.56 0.00 0.00 2.87
1176 1190 2.535331 GATCGCGCTCTTCTTCTTCTT 58.465 47.619 5.56 0.00 0.00 2.52
1177 1191 1.532921 CGATCGCGCTCTTCTTCTTCT 60.533 52.381 5.56 0.00 0.00 2.85
1178 1192 0.843242 CGATCGCGCTCTTCTTCTTC 59.157 55.000 5.56 0.00 0.00 2.87
1179 1193 2.950877 CGATCGCGCTCTTCTTCTT 58.049 52.632 5.56 0.00 0.00 2.52
1229 1256 3.580100 ATCTCCATGGATCGGCGCG 62.580 63.158 16.63 0.00 0.00 6.86
1401 1428 2.279517 GGCGACAGGAGCGGTATG 60.280 66.667 0.00 0.00 35.00 2.39
1551 1578 1.284982 CGTCTGTCCCGTTGCTGAAG 61.285 60.000 0.00 0.00 0.00 3.02
1552 1579 1.300620 CGTCTGTCCCGTTGCTGAA 60.301 57.895 0.00 0.00 0.00 3.02
1564 1591 4.039357 CGTGGCCGTCTCGTCTGT 62.039 66.667 0.00 0.00 0.00 3.41
1639 1666 2.046700 TTTGGAAGCGGGCGTAGG 60.047 61.111 0.00 0.00 0.00 3.18
1640 1667 2.106683 CCTTTGGAAGCGGGCGTAG 61.107 63.158 0.00 0.00 0.00 3.51
1641 1668 2.046700 CCTTTGGAAGCGGGCGTA 60.047 61.111 0.00 0.00 0.00 4.42
1773 1800 1.109920 TCCTGGATCCTCGCTACTGC 61.110 60.000 14.23 0.00 0.00 4.40
1776 1803 0.755698 TGGTCCTGGATCCTCGCTAC 60.756 60.000 14.23 4.21 0.00 3.58
1780 1807 0.176680 CAAGTGGTCCTGGATCCTCG 59.823 60.000 14.23 3.91 0.00 4.63
1834 1866 2.664851 CTTTGGCAGTCACCGCGA 60.665 61.111 8.23 0.00 0.00 5.87
1844 1876 3.594775 CACGTGCTGGCTTTGGCA 61.595 61.111 0.82 0.00 40.87 4.92
1848 1880 2.646719 CATGCACGTGCTGGCTTT 59.353 55.556 37.59 14.97 42.66 3.51
1882 1915 1.552348 GCAGACACACACGAGAGCAC 61.552 60.000 0.00 0.00 0.00 4.40
1883 1916 1.300156 GCAGACACACACGAGAGCA 60.300 57.895 0.00 0.00 0.00 4.26
1884 1917 2.024319 GGCAGACACACACGAGAGC 61.024 63.158 0.00 0.00 0.00 4.09
1886 1919 1.106944 TGAGGCAGACACACACGAGA 61.107 55.000 0.00 0.00 0.00 4.04
1887 1920 0.037882 ATGAGGCAGACACACACGAG 60.038 55.000 0.00 0.00 0.00 4.18
1888 1921 0.319813 CATGAGGCAGACACACACGA 60.320 55.000 0.00 0.00 0.00 4.35
1907 1940 4.373116 TTCACGAGGAGGGCACGC 62.373 66.667 0.00 0.00 0.00 5.34
2043 2076 5.364446 TCTGCCATTTGCTTTATTGGATCAT 59.636 36.000 0.00 0.00 42.00 2.45
2069 2102 0.616371 TACAACGAGGGACATTGGGG 59.384 55.000 0.00 0.00 0.00 4.96
2131 2164 1.526575 AATTCTGCGTGGTTGGCCTG 61.527 55.000 3.32 0.00 35.27 4.85
2132 2165 1.228552 AATTCTGCGTGGTTGGCCT 60.229 52.632 3.32 0.00 35.27 5.19
2134 2167 1.154225 CGAATTCTGCGTGGTTGGC 60.154 57.895 3.52 0.00 0.00 4.52
2135 2168 1.154225 GCGAATTCTGCGTGGTTGG 60.154 57.895 3.52 0.00 0.00 3.77
2136 2169 0.725784 GTGCGAATTCTGCGTGGTTG 60.726 55.000 14.50 0.00 34.24 3.77
2137 2170 0.884704 AGTGCGAATTCTGCGTGGTT 60.885 50.000 14.50 0.54 34.24 3.67
2138 2171 1.301716 AGTGCGAATTCTGCGTGGT 60.302 52.632 14.50 0.99 34.24 4.16
2140 2173 1.510623 GCAGTGCGAATTCTGCGTG 60.511 57.895 0.00 14.46 45.42 5.34
2175 2211 7.016072 CCCCTGAAATATCTAGAAGTCTGACAT 59.984 40.741 10.88 0.00 0.00 3.06
2186 2222 7.739825 TCATGTTTCTCCCCTGAAATATCTAG 58.260 38.462 0.00 0.00 36.23 2.43
2248 2284 2.533266 CGGAGCAATGAAATGAAAGGC 58.467 47.619 0.00 0.00 0.00 4.35
2321 2357 8.531982 TGATGAACAGCTTGTATTCTACTACTT 58.468 33.333 0.00 0.00 0.00 2.24
2485 2539 7.868415 CACTCTTATATTTCTTTACGGAGGGAG 59.132 40.741 0.00 0.00 0.00 4.30
2486 2540 7.343833 ACACTCTTATATTTCTTTACGGAGGGA 59.656 37.037 0.00 0.00 0.00 4.20
2487 2541 7.498443 ACACTCTTATATTTCTTTACGGAGGG 58.502 38.462 0.00 0.00 0.00 4.30
2488 2542 8.943909 AACACTCTTATATTTCTTTACGGAGG 57.056 34.615 0.00 0.00 0.00 4.30
2505 2559 8.908903 CCTCTGTATAGTGATCTAAACACTCTT 58.091 37.037 0.00 0.00 45.58 2.85
2506 2560 7.504238 CCCTCTGTATAGTGATCTAAACACTCT 59.496 40.741 0.00 0.00 45.58 3.24
2507 2561 7.502895 TCCCTCTGTATAGTGATCTAAACACTC 59.497 40.741 0.00 0.00 45.58 3.51
2509 2563 7.285858 ACTCCCTCTGTATAGTGATCTAAACAC 59.714 40.741 0.00 0.00 38.38 3.32
2510 2564 7.355101 ACTCCCTCTGTATAGTGATCTAAACA 58.645 38.462 0.00 0.00 0.00 2.83
2511 2565 7.826918 ACTCCCTCTGTATAGTGATCTAAAC 57.173 40.000 0.00 0.00 0.00 2.01
2512 2566 9.742144 GATACTCCCTCTGTATAGTGATCTAAA 57.258 37.037 0.00 0.00 31.55 1.85
2513 2567 8.891501 TGATACTCCCTCTGTATAGTGATCTAA 58.108 37.037 0.00 0.00 31.55 2.10
2514 2568 8.450780 TGATACTCCCTCTGTATAGTGATCTA 57.549 38.462 0.00 0.00 31.55 1.98
2515 2569 7.336475 TGATACTCCCTCTGTATAGTGATCT 57.664 40.000 0.00 0.00 31.55 2.75
2516 2570 7.668052 AGTTGATACTCCCTCTGTATAGTGATC 59.332 40.741 0.00 0.00 31.55 2.92
2517 2571 7.531317 AGTTGATACTCCCTCTGTATAGTGAT 58.469 38.462 0.00 0.00 31.55 3.06
2518 2572 6.912426 AGTTGATACTCCCTCTGTATAGTGA 58.088 40.000 0.00 0.00 31.55 3.41
2519 2573 7.068839 ACAAGTTGATACTCCCTCTGTATAGTG 59.931 40.741 10.54 0.00 31.99 2.74
2520 2574 7.126733 ACAAGTTGATACTCCCTCTGTATAGT 58.873 38.462 10.54 0.00 31.99 2.12
2521 2575 7.255660 GGACAAGTTGATACTCCCTCTGTATAG 60.256 44.444 10.54 0.00 31.99 1.31
2522 2576 6.550108 GGACAAGTTGATACTCCCTCTGTATA 59.450 42.308 10.54 0.00 31.99 1.47
2523 2577 5.364157 GGACAAGTTGATACTCCCTCTGTAT 59.636 44.000 10.54 0.00 31.99 2.29
2524 2578 4.710375 GGACAAGTTGATACTCCCTCTGTA 59.290 45.833 10.54 0.00 31.99 2.74
2525 2579 3.515901 GGACAAGTTGATACTCCCTCTGT 59.484 47.826 10.54 0.00 31.99 3.41
2526 2580 3.772025 AGGACAAGTTGATACTCCCTCTG 59.228 47.826 10.54 0.00 31.99 3.35
2527 2581 3.772025 CAGGACAAGTTGATACTCCCTCT 59.228 47.826 10.54 0.00 31.99 3.69
2528 2582 3.680196 GCAGGACAAGTTGATACTCCCTC 60.680 52.174 10.54 0.00 31.99 4.30
2529 2583 2.237392 GCAGGACAAGTTGATACTCCCT 59.763 50.000 10.54 3.30 31.99 4.20
2530 2584 2.027192 TGCAGGACAAGTTGATACTCCC 60.027 50.000 10.54 1.08 31.99 4.30
2531 2585 3.334583 TGCAGGACAAGTTGATACTCC 57.665 47.619 10.54 5.99 31.99 3.85
2532 2586 4.811557 GGTATGCAGGACAAGTTGATACTC 59.188 45.833 10.54 0.00 31.99 2.59
2533 2587 4.225042 TGGTATGCAGGACAAGTTGATACT 59.775 41.667 10.54 1.43 35.68 2.12
2534 2588 4.513442 TGGTATGCAGGACAAGTTGATAC 58.487 43.478 10.54 5.80 0.00 2.24
2535 2589 4.469586 TCTGGTATGCAGGACAAGTTGATA 59.530 41.667 10.54 0.00 0.00 2.15
2536 2590 3.264193 TCTGGTATGCAGGACAAGTTGAT 59.736 43.478 10.54 0.00 0.00 2.57
2537 2591 2.637382 TCTGGTATGCAGGACAAGTTGA 59.363 45.455 10.54 0.00 0.00 3.18
2538 2592 3.005554 CTCTGGTATGCAGGACAAGTTG 58.994 50.000 0.00 0.00 0.00 3.16
2589 2643 1.071299 TGTTCTGTCATGGCGCAGT 59.929 52.632 10.83 0.00 34.57 4.40
2745 2801 0.865769 ATGACGCAACCACGAAAGAC 59.134 50.000 0.00 0.00 36.70 3.01
2753 2809 0.037326 GTCTGAGGATGACGCAACCA 60.037 55.000 8.40 0.00 0.00 3.67
2788 2844 7.038017 TGTCCTTAATTGACTTCTCTCAGGAAT 60.038 37.037 6.78 0.00 33.83 3.01
2803 2859 6.906157 ATGCCCTAATGATGTCCTTAATTG 57.094 37.500 0.00 0.00 0.00 2.32
2804 2860 6.840705 ACAATGCCCTAATGATGTCCTTAATT 59.159 34.615 0.00 0.00 0.00 1.40
2824 2880 4.998672 ACCCAGATTTTGATTTGCACAATG 59.001 37.500 0.00 0.00 27.44 2.82
2854 2910 7.041635 ACACAAATGTCTTTCATCAACATCA 57.958 32.000 0.00 0.00 31.55 3.07
2904 2960 9.423061 GCAGACCAATTGTTCAGTAATTTTTAT 57.577 29.630 5.73 0.00 0.00 1.40
2905 2961 7.593273 CGCAGACCAATTGTTCAGTAATTTTTA 59.407 33.333 5.73 0.00 0.00 1.52
2906 2962 6.420604 CGCAGACCAATTGTTCAGTAATTTTT 59.579 34.615 5.73 0.00 0.00 1.94
2907 2963 5.920273 CGCAGACCAATTGTTCAGTAATTTT 59.080 36.000 5.73 0.00 0.00 1.82
2915 2971 0.592637 CTGCGCAGACCAATTGTTCA 59.407 50.000 33.66 0.00 0.00 3.18
2931 2987 2.328819 AGATCTCCATGAACTGCTGC 57.671 50.000 0.00 0.00 0.00 5.25
2973 3034 2.368875 CCCAGCCCGTTCTGTTATATCT 59.631 50.000 1.35 0.00 32.32 1.98
2978 3039 1.844289 ACCCCAGCCCGTTCTGTTA 60.844 57.895 1.35 0.00 32.32 2.41
2983 3044 1.524008 CTTTTCACCCCAGCCCGTTC 61.524 60.000 0.00 0.00 0.00 3.95
2986 3047 1.971695 GACTTTTCACCCCAGCCCG 60.972 63.158 0.00 0.00 0.00 6.13
2987 3048 1.971695 CGACTTTTCACCCCAGCCC 60.972 63.158 0.00 0.00 0.00 5.19
2988 3049 1.971695 CCGACTTTTCACCCCAGCC 60.972 63.158 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.