Multiple sequence alignment - TraesCS4A01G094000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G094000 chr4A 100.000 3670 0 0 1 3670 101760024 101756355 0.000000e+00 6778.0
1 TraesCS4A01G094000 chr4D 94.332 1588 63 19 1440 3011 363662323 363663899 0.000000e+00 2409.0
2 TraesCS4A01G094000 chr4D 86.928 765 44 13 5 729 363660762 363661510 0.000000e+00 808.0
3 TraesCS4A01G094000 chr4D 91.014 345 17 9 815 1150 363661535 363661874 1.550000e-123 453.0
4 TraesCS4A01G094000 chr4D 87.464 351 24 10 1171 1515 363661987 363662323 1.600000e-103 387.0
5 TraesCS4A01G094000 chr4B 93.138 1501 40 25 1468 2950 449015029 449016484 0.000000e+00 2143.0
6 TraesCS4A01G094000 chr4B 89.110 1157 68 28 5 1139 449013455 449014575 0.000000e+00 1386.0
7 TraesCS4A01G094000 chr4B 87.888 322 21 6 1197 1515 449014716 449015022 2.690000e-96 363.0
8 TraesCS4A01G094000 chr2B 95.833 528 11 2 3129 3647 575378653 575378128 0.000000e+00 843.0
9 TraesCS4A01G094000 chr2B 98.423 317 3 1 3331 3647 793142457 793142771 1.150000e-154 556.0
10 TraesCS4A01G094000 chr3B 95.367 518 11 2 3130 3647 736493549 736494053 0.000000e+00 811.0
11 TraesCS4A01G094000 chr3B 98.726 314 4 0 3334 3647 224961248 224961561 3.200000e-155 558.0
12 TraesCS4A01G094000 chr3B 90.741 324 28 2 3012 3334 11206201 11206523 7.280000e-117 431.0
13 TraesCS4A01G094000 chr3B 86.087 115 16 0 999 1113 623149141 623149255 1.380000e-24 124.0
14 TraesCS4A01G094000 chr7B 94.402 518 16 2 3130 3647 389111427 389111931 0.000000e+00 784.0
15 TraesCS4A01G094000 chr6A 93.822 518 19 2 3130 3647 187296660 187297164 0.000000e+00 767.0
16 TraesCS4A01G094000 chr6A 96.035 227 5 3 3109 3334 53495320 53495543 2.080000e-97 366.0
17 TraesCS4A01G094000 chr7A 93.182 528 25 9 3129 3647 664787983 664787458 0.000000e+00 765.0
18 TraesCS4A01G094000 chr7A 98.423 317 3 1 3331 3647 317175976 317176290 1.150000e-154 556.0
19 TraesCS4A01G094000 chr7A 97.391 115 3 0 3010 3124 78662948 78662834 2.890000e-46 196.0
20 TraesCS4A01G094000 chr7A 97.368 114 3 0 3011 3124 610088989 610089102 1.040000e-45 195.0
21 TraesCS4A01G094000 chr7A 100.000 29 0 0 1636 1664 729645357 729645385 2.000000e-03 54.7
22 TraesCS4A01G094000 chr3A 90.909 539 30 8 3121 3647 672637912 672638443 0.000000e+00 706.0
23 TraesCS4A01G094000 chr3A 84.677 124 17 2 999 1122 611701037 611701158 4.980000e-24 122.0
24 TraesCS4A01G094000 chr6B 89.583 528 35 11 3129 3643 132606394 132605874 0.000000e+00 652.0
25 TraesCS4A01G094000 chr6B 95.041 121 6 0 3004 3124 181124585 181124705 1.350000e-44 191.0
26 TraesCS4A01G094000 chrUn 99.045 314 1 1 3334 3647 374419967 374420278 2.470000e-156 562.0
27 TraesCS4A01G094000 chr2A 98.423 317 3 1 3331 3647 740400600 740400914 1.150000e-154 556.0
28 TraesCS4A01G094000 chr5A 95.016 321 14 2 3015 3334 581130530 581130211 1.520000e-138 503.0
29 TraesCS4A01G094000 chr5A 86.751 317 30 10 3022 3334 118252732 118253040 3.510000e-90 342.0
30 TraesCS4A01G094000 chr1A 88.026 309 25 8 3031 3334 298622664 298622965 4.510000e-94 355.0
31 TraesCS4A01G094000 chr1A 95.082 122 6 0 3007 3128 58937507 58937386 3.740000e-45 193.0
32 TraesCS4A01G094000 chr2D 86.478 318 29 11 3022 3334 30743976 30743668 1.630000e-88 337.0
33 TraesCS4A01G094000 chr3D 85.217 115 17 0 999 1113 469153488 469153602 6.440000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G094000 chr4A 101756355 101760024 3669 True 6778.000000 6778 100.000000 1 3670 1 chr4A.!!$R1 3669
1 TraesCS4A01G094000 chr4D 363660762 363663899 3137 False 1014.250000 2409 89.934500 5 3011 4 chr4D.!!$F1 3006
2 TraesCS4A01G094000 chr4B 449013455 449016484 3029 False 1297.333333 2143 90.045333 5 2950 3 chr4B.!!$F1 2945
3 TraesCS4A01G094000 chr2B 575378128 575378653 525 True 843.000000 843 95.833000 3129 3647 1 chr2B.!!$R1 518
4 TraesCS4A01G094000 chr3B 736493549 736494053 504 False 811.000000 811 95.367000 3130 3647 1 chr3B.!!$F4 517
5 TraesCS4A01G094000 chr7B 389111427 389111931 504 False 784.000000 784 94.402000 3130 3647 1 chr7B.!!$F1 517
6 TraesCS4A01G094000 chr6A 187296660 187297164 504 False 767.000000 767 93.822000 3130 3647 1 chr6A.!!$F2 517
7 TraesCS4A01G094000 chr7A 664787458 664787983 525 True 765.000000 765 93.182000 3129 3647 1 chr7A.!!$R2 518
8 TraesCS4A01G094000 chr3A 672637912 672638443 531 False 706.000000 706 90.909000 3121 3647 1 chr3A.!!$F2 526
9 TraesCS4A01G094000 chr6B 132605874 132606394 520 True 652.000000 652 89.583000 3129 3643 1 chr6B.!!$R1 514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
459 467 0.104304 ATACATGCGTCCGGAGAACC 59.896 55.0 3.06 0.0 0.00 3.62 F
1203 1376 0.035534 TGTGCTGTGACAACCTGTGT 60.036 50.0 0.00 0.0 45.74 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1268 1441 0.239347 GTCCATGACTGTTGCTGTGC 59.761 55.0 0.0 0.0 0.00 4.57 R
3000 3282 0.099968 CCAGCCGAATGCAGATTGTG 59.900 55.0 0.0 0.0 44.83 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.830648 TCCCTCCGCCATTAGAGTTG 59.169 55.000 0.00 0.00 0.00 3.16
24 25 1.407437 CCTCCGCCATTAGAGTTGCTT 60.407 52.381 0.00 0.00 0.00 3.91
28 29 1.936547 CGCCATTAGAGTTGCTTCTCC 59.063 52.381 5.39 0.00 35.28 3.71
29 30 2.293170 GCCATTAGAGTTGCTTCTCCC 58.707 52.381 5.39 0.00 35.28 4.30
30 31 2.092699 GCCATTAGAGTTGCTTCTCCCT 60.093 50.000 5.39 0.00 35.28 4.20
31 32 3.802866 CCATTAGAGTTGCTTCTCCCTC 58.197 50.000 5.39 0.00 35.28 4.30
32 33 3.452474 CATTAGAGTTGCTTCTCCCTCG 58.548 50.000 5.39 0.00 35.28 4.63
33 34 1.475403 TAGAGTTGCTTCTCCCTCGG 58.525 55.000 5.39 0.00 35.28 4.63
34 35 1.448717 GAGTTGCTTCTCCCTCGGC 60.449 63.158 0.00 0.00 0.00 5.54
35 36 1.893919 GAGTTGCTTCTCCCTCGGCT 61.894 60.000 0.00 0.00 0.00 5.52
49 50 2.480555 GGCTTGGTCATTGCGTCG 59.519 61.111 0.00 0.00 0.00 5.12
134 136 2.438434 CCCCCGCTGTTCATCACC 60.438 66.667 0.00 0.00 0.00 4.02
146 148 3.069586 TGTTCATCACCACTTCTCGTCTT 59.930 43.478 0.00 0.00 0.00 3.01
160 162 2.561419 CTCGTCTTCCCCTCTGTTTGTA 59.439 50.000 0.00 0.00 0.00 2.41
167 169 6.594547 GTCTTCCCCTCTGTTTGTAATCTTAC 59.405 42.308 0.00 0.00 0.00 2.34
168 170 5.080969 TCCCCTCTGTTTGTAATCTTACG 57.919 43.478 0.00 0.00 36.45 3.18
170 172 4.630069 CCCCTCTGTTTGTAATCTTACGTG 59.370 45.833 0.00 0.00 36.45 4.49
171 173 4.092968 CCCTCTGTTTGTAATCTTACGTGC 59.907 45.833 0.00 0.00 36.45 5.34
175 183 2.012937 TTGTAATCTTACGTGCGGGG 57.987 50.000 0.00 0.00 36.45 5.73
236 244 0.309922 TCGTCGTCTTTGCTCGTCTT 59.690 50.000 0.00 0.00 0.00 3.01
243 251 1.686587 TCTTTGCTCGTCTTGTCTCCA 59.313 47.619 0.00 0.00 0.00 3.86
249 257 2.095461 CTCGTCTTGTCTCCATCTCCA 58.905 52.381 0.00 0.00 0.00 3.86
291 299 3.524541 CAGCCTGTAAATCATTTTGGCC 58.475 45.455 14.21 0.00 39.68 5.36
296 304 2.104170 GTAAATCATTTTGGCCCCGGA 58.896 47.619 0.73 0.00 0.00 5.14
305 313 1.330234 TTGGCCCCGGAACTAAAAAC 58.670 50.000 0.73 0.00 0.00 2.43
315 323 2.157085 GGAACTAAAAACAGAGGCGTCG 59.843 50.000 0.00 0.00 0.00 5.12
459 467 0.104304 ATACATGCGTCCGGAGAACC 59.896 55.000 3.06 0.00 0.00 3.62
505 514 7.416890 GGTTGATAGATAGATGGACGGATTAGG 60.417 44.444 0.00 0.00 0.00 2.69
506 515 5.594725 TGATAGATAGATGGACGGATTAGGC 59.405 44.000 0.00 0.00 0.00 3.93
507 516 4.054359 AGATAGATGGACGGATTAGGCT 57.946 45.455 0.00 0.00 0.00 4.58
508 517 4.421131 AGATAGATGGACGGATTAGGCTT 58.579 43.478 0.00 0.00 0.00 4.35
509 518 5.580998 AGATAGATGGACGGATTAGGCTTA 58.419 41.667 0.00 0.00 0.00 3.09
510 519 6.017192 AGATAGATGGACGGATTAGGCTTAA 58.983 40.000 0.00 0.00 0.00 1.85
511 520 6.497259 AGATAGATGGACGGATTAGGCTTAAA 59.503 38.462 0.00 0.00 0.00 1.52
653 696 4.115199 AGGCCGCAGATTGTCCCC 62.115 66.667 0.00 0.00 0.00 4.81
658 701 3.512516 GCAGATTGTCCCCAGCGC 61.513 66.667 0.00 0.00 0.00 5.92
661 704 0.531532 CAGATTGTCCCCAGCGCTAG 60.532 60.000 10.99 1.16 0.00 3.42
662 705 0.687757 AGATTGTCCCCAGCGCTAGA 60.688 55.000 10.99 4.44 0.00 2.43
663 706 0.249657 GATTGTCCCCAGCGCTAGAG 60.250 60.000 10.99 1.13 0.00 2.43
684 727 2.635427 GGATCAGGTTGTCCTCCTATCC 59.365 54.545 0.00 0.00 43.07 2.59
687 730 1.765314 CAGGTTGTCCTCCTATCCCAG 59.235 57.143 0.00 0.00 43.07 4.45
688 731 1.366435 AGGTTGTCCTCCTATCCCAGT 59.634 52.381 0.00 0.00 40.58 4.00
689 732 1.486726 GGTTGTCCTCCTATCCCAGTG 59.513 57.143 0.00 0.00 0.00 3.66
702 745 2.238521 TCCCAGTGCCTTCAAATCAAC 58.761 47.619 0.00 0.00 0.00 3.18
736 779 7.675962 TTTTGCTTTCCTATGTAATACGTGT 57.324 32.000 0.00 0.00 0.00 4.49
737 780 6.656314 TTGCTTTCCTATGTAATACGTGTG 57.344 37.500 0.00 0.00 0.00 3.82
738 781 5.726397 TGCTTTCCTATGTAATACGTGTGT 58.274 37.500 0.00 0.00 0.00 3.72
739 782 6.865411 TGCTTTCCTATGTAATACGTGTGTA 58.135 36.000 0.00 0.00 34.45 2.90
740 783 6.753279 TGCTTTCCTATGTAATACGTGTGTAC 59.247 38.462 0.00 0.00 32.26 2.90
741 784 6.976925 GCTTTCCTATGTAATACGTGTGTACT 59.023 38.462 0.00 0.00 32.26 2.73
742 785 8.131100 GCTTTCCTATGTAATACGTGTGTACTA 58.869 37.037 0.00 0.00 32.26 1.82
743 786 9.443283 CTTTCCTATGTAATACGTGTGTACTAC 57.557 37.037 0.00 0.00 34.64 2.73
744 787 8.737168 TTCCTATGTAATACGTGTGTACTACT 57.263 34.615 0.00 0.00 35.01 2.57
745 788 8.146479 TCCTATGTAATACGTGTGTACTACTG 57.854 38.462 0.00 0.00 35.01 2.74
789 844 1.080569 GTGCAATGCAAACTCCCGG 60.081 57.895 10.44 0.00 41.47 5.73
794 849 1.244019 AATGCAAACTCCCGGTGCTC 61.244 55.000 14.30 0.00 39.09 4.26
897 959 4.978083 TCTGAAGTCTGAACCGTATACC 57.022 45.455 0.00 0.00 0.00 2.73
953 1020 6.475076 AGATCATCTCATTCGTTTCTTCTTCG 59.525 38.462 0.00 0.00 0.00 3.79
1135 1210 6.974622 GGTCAGCACAAATACTCCATAATTTG 59.025 38.462 6.30 6.30 44.78 2.32
1188 1361 5.298347 GGTATCCTGATTAGTTACCTGTGC 58.702 45.833 6.62 0.00 32.27 4.57
1203 1376 0.035534 TGTGCTGTGACAACCTGTGT 60.036 50.000 0.00 0.00 45.74 3.72
1268 1441 3.809832 GTGGTCCATGTGAATAGATTCCG 59.190 47.826 0.00 0.00 35.97 4.30
1304 1477 2.224606 GGACCTGTATGCATCACCATG 58.775 52.381 0.19 0.00 0.00 3.66
1400 1573 2.978156 TCCCTGTCCTGAGCAAATTT 57.022 45.000 0.00 0.00 0.00 1.82
1403 1576 2.420022 CCCTGTCCTGAGCAAATTTACG 59.580 50.000 0.00 0.00 0.00 3.18
1406 1579 3.071479 TGTCCTGAGCAAATTTACGTCC 58.929 45.455 0.00 0.00 0.00 4.79
1412 1585 3.560481 TGAGCAAATTTACGTCCGTTTCA 59.440 39.130 0.00 0.00 0.00 2.69
1419 1592 1.717194 TACGTCCGTTTCAAGCATCC 58.283 50.000 0.00 0.00 0.00 3.51
1420 1593 0.034896 ACGTCCGTTTCAAGCATCCT 59.965 50.000 0.00 0.00 0.00 3.24
1421 1594 1.156736 CGTCCGTTTCAAGCATCCTT 58.843 50.000 0.00 0.00 0.00 3.36
1422 1595 1.535462 CGTCCGTTTCAAGCATCCTTT 59.465 47.619 0.00 0.00 0.00 3.11
1423 1596 2.031157 CGTCCGTTTCAAGCATCCTTTT 60.031 45.455 0.00 0.00 0.00 2.27
1424 1597 3.565516 GTCCGTTTCAAGCATCCTTTTC 58.434 45.455 0.00 0.00 0.00 2.29
1425 1598 3.253432 GTCCGTTTCAAGCATCCTTTTCT 59.747 43.478 0.00 0.00 0.00 2.52
1426 1599 3.888930 TCCGTTTCAAGCATCCTTTTCTT 59.111 39.130 0.00 0.00 0.00 2.52
1427 1600 3.983344 CCGTTTCAAGCATCCTTTTCTTG 59.017 43.478 0.00 0.00 38.73 3.02
1438 1611 2.091333 TCCTTTTCTTGGCTGGGACTTT 60.091 45.455 0.00 0.00 0.00 2.66
1449 1622 4.079253 GGCTGGGACTTTAATTGTTCAGA 58.921 43.478 12.68 0.00 0.00 3.27
1567 1824 1.952296 GCCAGAGGTAATTGAGCATGG 59.048 52.381 0.00 0.00 37.59 3.66
1631 1888 2.838736 TCTCACTGTCTTGCTTTGGTC 58.161 47.619 0.00 0.00 0.00 4.02
1908 2165 0.321653 GTGGTGACCAAGGCCTAGTG 60.322 60.000 5.57 0.12 34.18 2.74
1916 2173 1.822990 CCAAGGCCTAGTGACGAGTAA 59.177 52.381 5.16 0.00 0.00 2.24
1921 2178 5.161943 AGGCCTAGTGACGAGTAAAATTT 57.838 39.130 1.29 0.00 0.00 1.82
1942 2199 0.958822 CCTTGAAGGTTGGGTTTCCG 59.041 55.000 2.25 0.00 35.24 4.30
1944 2201 1.607148 CTTGAAGGTTGGGTTTCCGTC 59.393 52.381 0.00 0.00 35.24 4.79
1945 2202 0.179012 TGAAGGTTGGGTTTCCGTCC 60.179 55.000 0.00 0.00 35.24 4.79
1946 2203 0.179012 GAAGGTTGGGTTTCCGTCCA 60.179 55.000 0.00 0.00 35.24 4.02
1947 2204 0.481128 AAGGTTGGGTTTCCGTCCAT 59.519 50.000 0.00 0.00 35.24 3.41
1948 2205 1.364269 AGGTTGGGTTTCCGTCCATA 58.636 50.000 0.00 0.00 35.24 2.74
1962 2220 6.850752 TCCGTCCATATATATGCTGAGAAA 57.149 37.500 16.08 0.00 32.40 2.52
1963 2221 7.423844 TCCGTCCATATATATGCTGAGAAAT 57.576 36.000 16.08 0.00 32.40 2.17
1964 2222 7.267857 TCCGTCCATATATATGCTGAGAAATG 58.732 38.462 16.08 1.26 32.40 2.32
1965 2223 6.481313 CCGTCCATATATATGCTGAGAAATGG 59.519 42.308 16.08 2.76 35.10 3.16
1970 2228 8.837389 CCATATATATGCTGAGAAATGGATGTG 58.163 37.037 16.08 0.00 35.68 3.21
1989 2247 9.420118 TGGATGTGGCTACTTTGATTTTAATAT 57.580 29.630 0.64 0.00 0.00 1.28
1990 2248 9.683069 GGATGTGGCTACTTTGATTTTAATATG 57.317 33.333 0.64 0.00 0.00 1.78
2274 2533 1.521681 GACTACATCACGGGGCTGC 60.522 63.158 0.00 0.00 0.00 5.25
2276 2535 4.830765 TACATCACGGGGCTGCGC 62.831 66.667 8.35 8.35 0.00 6.09
2301 2560 1.621672 CCTGGAGTCCCTGAGGAAGC 61.622 65.000 6.74 0.00 46.38 3.86
2670 2929 0.596083 GCCCGAGATCGTCATGTGAG 60.596 60.000 1.09 0.00 37.74 3.51
2671 2930 0.741326 CCCGAGATCGTCATGTGAGT 59.259 55.000 1.09 0.00 37.74 3.41
2675 2934 2.534298 GAGATCGTCATGTGAGTGTGG 58.466 52.381 0.00 0.00 0.00 4.17
2733 2992 1.416030 GCCACATGGTGAAAAAGGGTT 59.584 47.619 0.00 0.00 35.23 4.11
2734 2993 2.630580 GCCACATGGTGAAAAAGGGTTA 59.369 45.455 0.00 0.00 35.23 2.85
2765 3024 7.159437 TCTTCATGCGTTTGTTGTTTTATTG 57.841 32.000 0.00 0.00 0.00 1.90
2769 3028 4.744570 TGCGTTTGTTGTTTTATTGGTCA 58.255 34.783 0.00 0.00 0.00 4.02
2770 3029 4.563184 TGCGTTTGTTGTTTTATTGGTCAC 59.437 37.500 0.00 0.00 0.00 3.67
2771 3030 4.026393 GCGTTTGTTGTTTTATTGGTCACC 60.026 41.667 0.00 0.00 0.00 4.02
2772 3031 4.205385 CGTTTGTTGTTTTATTGGTCACCG 59.795 41.667 0.00 0.00 0.00 4.94
2773 3032 5.341617 GTTTGTTGTTTTATTGGTCACCGA 58.658 37.500 0.00 0.00 0.00 4.69
2774 3033 4.822036 TGTTGTTTTATTGGTCACCGAG 57.178 40.909 0.00 0.00 0.00 4.63
2787 3050 1.001974 TCACCGAGCTGCAAGTGTAAT 59.998 47.619 13.81 0.00 35.30 1.89
2929 3205 5.847304 TGTAGATAGGTGTCAGATGAATGC 58.153 41.667 0.00 0.00 0.00 3.56
2966 3248 7.068103 TCAGTTTTACCATTTCTGTGTGATGTT 59.932 33.333 0.00 0.00 0.00 2.71
2967 3249 7.706179 CAGTTTTACCATTTCTGTGTGATGTTT 59.294 33.333 0.00 0.00 0.00 2.83
2968 3250 8.257306 AGTTTTACCATTTCTGTGTGATGTTTT 58.743 29.630 0.00 0.00 0.00 2.43
2969 3251 8.878769 GTTTTACCATTTCTGTGTGATGTTTTT 58.121 29.630 0.00 0.00 0.00 1.94
2970 3252 8.641499 TTTACCATTTCTGTGTGATGTTTTTC 57.359 30.769 0.00 0.00 0.00 2.29
2971 3253 6.469782 ACCATTTCTGTGTGATGTTTTTCT 57.530 33.333 0.00 0.00 0.00 2.52
2972 3254 7.581213 ACCATTTCTGTGTGATGTTTTTCTA 57.419 32.000 0.00 0.00 0.00 2.10
2973 3255 8.006298 ACCATTTCTGTGTGATGTTTTTCTAA 57.994 30.769 0.00 0.00 0.00 2.10
2974 3256 8.641541 ACCATTTCTGTGTGATGTTTTTCTAAT 58.358 29.630 0.00 0.00 0.00 1.73
2975 3257 8.918658 CCATTTCTGTGTGATGTTTTTCTAATG 58.081 33.333 0.00 0.00 0.00 1.90
2976 3258 9.467258 CATTTCTGTGTGATGTTTTTCTAATGT 57.533 29.630 0.00 0.00 0.00 2.71
2981 3263 7.995289 TGTGTGATGTTTTTCTAATGTGTTCT 58.005 30.769 0.00 0.00 0.00 3.01
2989 3271 8.134895 TGTTTTTCTAATGTGTTCTTCCATGAC 58.865 33.333 0.00 0.00 0.00 3.06
2991 3273 7.672983 TTTCTAATGTGTTCTTCCATGACTC 57.327 36.000 0.00 0.00 0.00 3.36
2998 3280 5.059833 GTGTTCTTCCATGACTCAGAAGTT 58.940 41.667 0.00 0.00 38.50 2.66
3000 3282 3.668447 TCTTCCATGACTCAGAAGTTGC 58.332 45.455 0.00 0.00 38.50 4.17
3016 3298 4.389772 GCACAATCTGCATTCGGC 57.610 55.556 0.00 0.00 46.29 5.54
3017 3299 1.805254 GCACAATCTGCATTCGGCT 59.195 52.632 0.00 0.00 46.29 5.52
3018 3300 0.524816 GCACAATCTGCATTCGGCTG 60.525 55.000 0.00 0.00 46.29 4.85
3019 3301 0.099968 CACAATCTGCATTCGGCTGG 59.900 55.000 0.00 0.00 45.15 4.85
3020 3302 0.322816 ACAATCTGCATTCGGCTGGT 60.323 50.000 0.00 0.00 45.15 4.00
3021 3303 0.379669 CAATCTGCATTCGGCTGGTC 59.620 55.000 0.00 0.00 45.15 4.02
3022 3304 0.035152 AATCTGCATTCGGCTGGTCA 60.035 50.000 0.00 0.00 45.15 4.02
3023 3305 0.745845 ATCTGCATTCGGCTGGTCAC 60.746 55.000 0.00 0.00 45.15 3.67
3024 3306 1.672030 CTGCATTCGGCTGGTCACA 60.672 57.895 0.00 0.00 45.15 3.58
3025 3307 1.228094 TGCATTCGGCTGGTCACAA 60.228 52.632 0.00 0.00 45.15 3.33
3026 3308 0.608856 TGCATTCGGCTGGTCACAAT 60.609 50.000 0.00 0.00 45.15 2.71
3027 3309 0.179156 GCATTCGGCTGGTCACAATG 60.179 55.000 0.00 0.00 40.25 2.82
3028 3310 0.452987 CATTCGGCTGGTCACAATGG 59.547 55.000 0.00 0.00 0.00 3.16
3029 3311 0.327924 ATTCGGCTGGTCACAATGGA 59.672 50.000 0.00 0.00 0.00 3.41
3030 3312 0.321564 TTCGGCTGGTCACAATGGAG 60.322 55.000 0.00 0.00 0.00 3.86
3031 3313 1.191489 TCGGCTGGTCACAATGGAGA 61.191 55.000 0.00 0.00 0.00 3.71
3032 3314 0.742281 CGGCTGGTCACAATGGAGAG 60.742 60.000 0.00 0.00 0.00 3.20
3033 3315 0.393537 GGCTGGTCACAATGGAGAGG 60.394 60.000 0.00 0.00 0.00 3.69
3034 3316 0.615331 GCTGGTCACAATGGAGAGGA 59.385 55.000 0.00 0.00 0.00 3.71
3035 3317 1.003580 GCTGGTCACAATGGAGAGGAA 59.996 52.381 0.00 0.00 0.00 3.36
3036 3318 2.704572 CTGGTCACAATGGAGAGGAAC 58.295 52.381 0.00 0.00 0.00 3.62
3038 3320 2.711009 TGGTCACAATGGAGAGGAACTT 59.289 45.455 0.00 0.00 41.55 2.66
3039 3321 3.907474 TGGTCACAATGGAGAGGAACTTA 59.093 43.478 0.00 0.00 41.55 2.24
3040 3322 4.020218 TGGTCACAATGGAGAGGAACTTAG 60.020 45.833 0.00 0.00 41.55 2.18
3041 3323 4.508662 GTCACAATGGAGAGGAACTTAGG 58.491 47.826 0.00 0.00 41.55 2.69
3042 3324 4.223032 GTCACAATGGAGAGGAACTTAGGA 59.777 45.833 0.00 0.00 41.55 2.94
3043 3325 4.467795 TCACAATGGAGAGGAACTTAGGAG 59.532 45.833 0.00 0.00 41.55 3.69
3044 3326 4.223923 CACAATGGAGAGGAACTTAGGAGT 59.776 45.833 0.00 0.00 41.55 3.85
3045 3327 5.422331 CACAATGGAGAGGAACTTAGGAGTA 59.578 44.000 0.00 0.00 41.55 2.59
3046 3328 6.023603 ACAATGGAGAGGAACTTAGGAGTAA 58.976 40.000 0.00 0.00 41.55 2.24
3047 3329 6.070710 ACAATGGAGAGGAACTTAGGAGTAAC 60.071 42.308 0.00 0.00 41.55 2.50
3048 3330 5.006896 TGGAGAGGAACTTAGGAGTAACA 57.993 43.478 0.00 0.00 41.55 2.41
3049 3331 5.590818 TGGAGAGGAACTTAGGAGTAACAT 58.409 41.667 0.00 0.00 41.55 2.71
3050 3332 5.657302 TGGAGAGGAACTTAGGAGTAACATC 59.343 44.000 0.00 0.00 41.55 3.06
3051 3333 5.657302 GGAGAGGAACTTAGGAGTAACATCA 59.343 44.000 0.00 0.00 41.55 3.07
3052 3334 6.406065 GGAGAGGAACTTAGGAGTAACATCAC 60.406 46.154 0.00 0.00 41.55 3.06
3053 3335 6.017192 AGAGGAACTTAGGAGTAACATCACA 58.983 40.000 0.00 0.00 41.55 3.58
3054 3336 6.038997 AGGAACTTAGGAGTAACATCACAC 57.961 41.667 0.00 0.00 34.21 3.82
3055 3337 5.542635 AGGAACTTAGGAGTAACATCACACA 59.457 40.000 0.00 0.00 34.21 3.72
3056 3338 5.638234 GGAACTTAGGAGTAACATCACACAC 59.362 44.000 0.00 0.00 34.21 3.82
3057 3339 6.420913 AACTTAGGAGTAACATCACACACT 57.579 37.500 0.00 0.00 34.21 3.55
3058 3340 6.420913 ACTTAGGAGTAACATCACACACTT 57.579 37.500 0.00 0.00 33.32 3.16
3059 3341 6.456501 ACTTAGGAGTAACATCACACACTTC 58.543 40.000 0.00 0.00 33.32 3.01
3060 3342 4.955811 AGGAGTAACATCACACACTTCA 57.044 40.909 0.00 0.00 0.00 3.02
3061 3343 5.290493 AGGAGTAACATCACACACTTCAA 57.710 39.130 0.00 0.00 0.00 2.69
3062 3344 5.869579 AGGAGTAACATCACACACTTCAAT 58.130 37.500 0.00 0.00 0.00 2.57
3063 3345 7.004555 AGGAGTAACATCACACACTTCAATA 57.995 36.000 0.00 0.00 0.00 1.90
3064 3346 6.874134 AGGAGTAACATCACACACTTCAATAC 59.126 38.462 0.00 0.00 0.00 1.89
3065 3347 6.649141 GGAGTAACATCACACACTTCAATACA 59.351 38.462 0.00 0.00 0.00 2.29
3066 3348 7.172532 GGAGTAACATCACACACTTCAATACAA 59.827 37.037 0.00 0.00 0.00 2.41
3067 3349 7.861630 AGTAACATCACACACTTCAATACAAC 58.138 34.615 0.00 0.00 0.00 3.32
3068 3350 6.942532 AACATCACACACTTCAATACAACT 57.057 33.333 0.00 0.00 0.00 3.16
3069 3351 6.942532 ACATCACACACTTCAATACAACTT 57.057 33.333 0.00 0.00 0.00 2.66
3070 3352 7.333528 ACATCACACACTTCAATACAACTTT 57.666 32.000 0.00 0.00 0.00 2.66
3071 3353 7.195646 ACATCACACACTTCAATACAACTTTG 58.804 34.615 0.00 0.00 0.00 2.77
3072 3354 5.577835 TCACACACTTCAATACAACTTTGC 58.422 37.500 0.00 0.00 0.00 3.68
3073 3355 5.356751 TCACACACTTCAATACAACTTTGCT 59.643 36.000 0.00 0.00 0.00 3.91
3074 3356 6.035843 CACACACTTCAATACAACTTTGCTT 58.964 36.000 0.00 0.00 0.00 3.91
3075 3357 7.066404 TCACACACTTCAATACAACTTTGCTTA 59.934 33.333 0.00 0.00 0.00 3.09
3076 3358 7.862372 CACACACTTCAATACAACTTTGCTTAT 59.138 33.333 0.00 0.00 0.00 1.73
3077 3359 7.862372 ACACACTTCAATACAACTTTGCTTATG 59.138 33.333 0.00 0.00 0.00 1.90
3078 3360 7.862372 CACACTTCAATACAACTTTGCTTATGT 59.138 33.333 0.00 0.00 0.00 2.29
3079 3361 7.862372 ACACTTCAATACAACTTTGCTTATGTG 59.138 33.333 0.00 0.00 0.00 3.21
3080 3362 7.862372 CACTTCAATACAACTTTGCTTATGTGT 59.138 33.333 0.00 0.00 0.00 3.72
3081 3363 8.076178 ACTTCAATACAACTTTGCTTATGTGTC 58.924 33.333 0.00 0.00 0.00 3.67
3082 3364 7.503521 TCAATACAACTTTGCTTATGTGTCA 57.496 32.000 0.00 0.00 0.00 3.58
3083 3365 7.359595 TCAATACAACTTTGCTTATGTGTCAC 58.640 34.615 0.00 0.00 0.00 3.67
3084 3366 6.875948 ATACAACTTTGCTTATGTGTCACA 57.124 33.333 8.40 8.40 0.00 3.58
3085 3367 5.772825 ACAACTTTGCTTATGTGTCACAT 57.227 34.783 21.70 21.70 42.35 3.21
3086 3368 6.875948 ACAACTTTGCTTATGTGTCACATA 57.124 33.333 19.64 19.64 39.88 2.29
3087 3369 7.452880 ACAACTTTGCTTATGTGTCACATAT 57.547 32.000 23.14 5.48 40.41 1.78
3088 3370 7.885297 ACAACTTTGCTTATGTGTCACATATT 58.115 30.769 23.14 11.81 40.41 1.28
3089 3371 8.359642 ACAACTTTGCTTATGTGTCACATATTT 58.640 29.630 23.14 4.42 40.41 1.40
3090 3372 9.838975 CAACTTTGCTTATGTGTCACATATTTA 57.161 29.630 23.14 10.29 40.41 1.40
3102 3384 9.591792 TGTGTCACATATTTAATGAAGAGAGAG 57.408 33.333 0.18 0.00 0.00 3.20
3103 3385 9.039870 GTGTCACATATTTAATGAAGAGAGAGG 57.960 37.037 0.00 0.00 0.00 3.69
3104 3386 8.762645 TGTCACATATTTAATGAAGAGAGAGGT 58.237 33.333 0.00 0.00 0.00 3.85
3105 3387 9.039870 GTCACATATTTAATGAAGAGAGAGGTG 57.960 37.037 0.00 0.00 0.00 4.00
3106 3388 7.712639 TCACATATTTAATGAAGAGAGAGGTGC 59.287 37.037 0.00 0.00 0.00 5.01
3107 3389 7.714377 CACATATTTAATGAAGAGAGAGGTGCT 59.286 37.037 0.00 0.00 0.00 4.40
3108 3390 8.270744 ACATATTTAATGAAGAGAGAGGTGCTT 58.729 33.333 0.00 0.00 0.00 3.91
3109 3391 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
3110 3392 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
3111 3393 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
3112 3394 1.345741 TGAAGAGAGAGGTGCTTGTGG 59.654 52.381 0.00 0.00 0.00 4.17
3113 3395 1.346068 GAAGAGAGAGGTGCTTGTGGT 59.654 52.381 0.00 0.00 0.00 4.16
3114 3396 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
3115 3397 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
3116 3398 2.300437 AGAGAGAGGTGCTTGTGGTAAC 59.700 50.000 0.00 0.00 0.00 2.50
3117 3399 2.300437 GAGAGAGGTGCTTGTGGTAACT 59.700 50.000 0.00 0.00 37.61 2.24
3118 3400 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
3119 3401 3.511934 AGAGAGGTGCTTGTGGTAACTAG 59.488 47.826 0.00 0.00 37.61 2.57
3131 3413 7.528996 TTGTGGTAACTAGCTAAAGTAGTGA 57.471 36.000 0.00 0.00 30.90 3.41
3257 3539 6.430864 TGAGCATTTATTATCCTCCAAACCA 58.569 36.000 0.00 0.00 0.00 3.67
3280 3562 1.089920 AATCCAGAACTCGCATGTGC 58.910 50.000 0.00 0.00 37.78 4.57
3290 3572 2.169352 ACTCGCATGTGCTAAAGGAGAT 59.831 45.455 11.89 0.00 39.32 2.75
3510 3814 7.361438 AGAGGAATTAAATGAGGAGAGAGAGA 58.639 38.462 0.00 0.00 0.00 3.10
3511 3815 7.506938 AGAGGAATTAAATGAGGAGAGAGAGAG 59.493 40.741 0.00 0.00 0.00 3.20
3652 3957 4.518249 AGTCAGACTAAAAATAGGGCTGC 58.482 43.478 0.00 0.00 0.00 5.25
3653 3958 4.226168 AGTCAGACTAAAAATAGGGCTGCT 59.774 41.667 0.00 0.00 0.00 4.24
3654 3959 4.333926 GTCAGACTAAAAATAGGGCTGCTG 59.666 45.833 0.00 0.00 0.00 4.41
3655 3960 4.225042 TCAGACTAAAAATAGGGCTGCTGA 59.775 41.667 0.00 0.00 0.00 4.26
3656 3961 4.943705 CAGACTAAAAATAGGGCTGCTGAA 59.056 41.667 0.00 0.00 0.00 3.02
3657 3962 5.065731 CAGACTAAAAATAGGGCTGCTGAAG 59.934 44.000 0.00 0.00 0.00 3.02
3658 3963 4.273318 ACTAAAAATAGGGCTGCTGAAGG 58.727 43.478 0.00 0.00 0.00 3.46
3659 3964 2.907458 AAAATAGGGCTGCTGAAGGT 57.093 45.000 0.00 0.00 0.00 3.50
3660 3965 2.426842 AAATAGGGCTGCTGAAGGTC 57.573 50.000 0.00 0.00 0.00 3.85
3661 3966 1.289160 AATAGGGCTGCTGAAGGTCA 58.711 50.000 0.00 0.00 0.00 4.02
3662 3967 0.543749 ATAGGGCTGCTGAAGGTCAC 59.456 55.000 0.00 0.00 0.00 3.67
3663 3968 0.835971 TAGGGCTGCTGAAGGTCACA 60.836 55.000 0.00 0.00 0.00 3.58
3664 3969 1.673665 GGGCTGCTGAAGGTCACAG 60.674 63.158 0.00 0.00 38.27 3.66
3665 3970 1.072159 GGCTGCTGAAGGTCACAGT 59.928 57.895 0.00 0.00 37.64 3.55
3666 3971 1.233285 GGCTGCTGAAGGTCACAGTG 61.233 60.000 0.00 0.00 37.64 3.66
3667 3972 1.233285 GCTGCTGAAGGTCACAGTGG 61.233 60.000 0.00 0.00 37.64 4.00
3668 3973 0.604780 CTGCTGAAGGTCACAGTGGG 60.605 60.000 0.00 0.00 37.64 4.61
3669 3974 1.968540 GCTGAAGGTCACAGTGGGC 60.969 63.158 0.00 0.00 37.64 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.123928 AACTCTAATGGCGGAGGGAG 58.876 55.000 0.00 0.00 34.22 4.30
2 3 0.830648 CAACTCTAATGGCGGAGGGA 59.169 55.000 0.00 0.00 34.22 4.20
3 4 0.815615 GCAACTCTAATGGCGGAGGG 60.816 60.000 0.00 0.00 34.22 4.30
21 22 2.124942 CCAAGCCGAGGGAGAAGC 60.125 66.667 0.00 0.00 0.00 3.86
24 25 0.909610 AATGACCAAGCCGAGGGAGA 60.910 55.000 0.00 0.00 0.00 3.71
28 29 2.753966 CGCAATGACCAAGCCGAGG 61.754 63.158 0.00 0.00 0.00 4.63
29 30 1.970917 GACGCAATGACCAAGCCGAG 61.971 60.000 0.00 0.00 0.00 4.63
30 31 2.031919 ACGCAATGACCAAGCCGA 59.968 55.556 0.00 0.00 0.00 5.54
31 32 2.480555 GACGCAATGACCAAGCCG 59.519 61.111 0.00 0.00 0.00 5.52
32 33 2.325082 ACGACGCAATGACCAAGCC 61.325 57.895 0.00 0.00 0.00 4.35
33 34 1.154413 CACGACGCAATGACCAAGC 60.154 57.895 0.00 0.00 0.00 4.01
34 35 1.497278 CCACGACGCAATGACCAAG 59.503 57.895 0.00 0.00 0.00 3.61
35 36 1.963855 CCCACGACGCAATGACCAA 60.964 57.895 0.00 0.00 0.00 3.67
49 50 4.459089 GCCTCTCTCGCCACCCAC 62.459 72.222 0.00 0.00 0.00 4.61
68 69 2.025418 CGTCGAGGAACCAAACCGG 61.025 63.158 0.00 0.00 42.50 5.28
134 136 1.203523 CAGAGGGGAAGACGAGAAGTG 59.796 57.143 0.00 0.00 0.00 3.16
146 148 4.529377 ACGTAAGATTACAAACAGAGGGGA 59.471 41.667 3.81 0.00 43.62 4.81
160 162 0.462789 CCTACCCCGCACGTAAGATT 59.537 55.000 0.00 0.00 43.62 2.40
167 169 2.757099 ACCTACCTACCCCGCACG 60.757 66.667 0.00 0.00 0.00 5.34
168 170 2.897972 CACCTACCTACCCCGCAC 59.102 66.667 0.00 0.00 0.00 5.34
170 172 3.858225 GGCACCTACCTACCCCGC 61.858 72.222 0.00 0.00 0.00 6.13
243 251 4.471747 CCATGATGAGATGGAGATGGAGAT 59.528 45.833 0.00 0.00 45.24 2.75
291 299 1.810755 GCCTCTGTTTTTAGTTCCGGG 59.189 52.381 0.00 0.00 0.00 5.73
296 304 1.529865 GCGACGCCTCTGTTTTTAGTT 59.470 47.619 9.14 0.00 0.00 2.24
305 313 4.116328 TTCTCCGCGACGCCTCTG 62.116 66.667 15.34 0.00 0.00 3.35
315 323 2.124942 CCTTGGCTCCTTCTCCGC 60.125 66.667 0.00 0.00 0.00 5.54
401 409 1.414550 ACCGGAAAACCAACCCAAATG 59.585 47.619 9.46 0.00 0.00 2.32
459 467 5.125100 ACCTATGTGCTGTTGAAAATGTG 57.875 39.130 0.00 0.00 0.00 3.21
505 514 3.426292 CCGCTCCACTTTAAGCTTTAAGC 60.426 47.826 21.85 9.18 42.84 3.09
506 515 3.426292 GCCGCTCCACTTTAAGCTTTAAG 60.426 47.826 20.66 20.66 36.35 1.85
507 516 2.486592 GCCGCTCCACTTTAAGCTTTAA 59.513 45.455 3.20 0.00 36.35 1.52
508 517 2.081462 GCCGCTCCACTTTAAGCTTTA 58.919 47.619 3.20 0.00 36.35 1.85
509 518 0.881796 GCCGCTCCACTTTAAGCTTT 59.118 50.000 3.20 0.00 36.35 3.51
510 519 0.960861 GGCCGCTCCACTTTAAGCTT 60.961 55.000 3.48 3.48 36.35 3.74
511 520 1.377333 GGCCGCTCCACTTTAAGCT 60.377 57.895 0.00 0.00 36.35 3.74
653 696 0.749649 AACCTGATCCTCTAGCGCTG 59.250 55.000 22.90 10.49 0.00 5.18
684 727 1.666888 GCGTTGATTTGAAGGCACTGG 60.667 52.381 0.00 0.00 40.86 4.00
687 730 1.689959 CAGCGTTGATTTGAAGGCAC 58.310 50.000 0.00 0.00 38.83 5.01
688 731 0.039256 GCAGCGTTGATTTGAAGGCA 60.039 50.000 2.38 0.00 38.83 4.75
689 732 0.733909 GGCAGCGTTGATTTGAAGGC 60.734 55.000 2.38 0.00 37.06 4.35
714 757 6.167685 ACACACGTATTACATAGGAAAGCAA 58.832 36.000 0.00 0.00 0.00 3.91
715 758 5.726397 ACACACGTATTACATAGGAAAGCA 58.274 37.500 0.00 0.00 0.00 3.91
729 772 7.621428 AGAACATACAGTAGTACACACGTAT 57.379 36.000 2.52 1.68 31.96 3.06
730 773 7.300320 CAAGAACATACAGTAGTACACACGTA 58.700 38.462 2.52 0.00 31.96 3.57
731 774 5.954296 AGAACATACAGTAGTACACACGT 57.046 39.130 2.52 0.00 31.96 4.49
732 775 5.060569 GCAAGAACATACAGTAGTACACACG 59.939 44.000 2.52 0.00 31.96 4.49
733 776 6.157211 AGCAAGAACATACAGTAGTACACAC 58.843 40.000 2.52 0.00 31.96 3.82
734 777 6.340962 AGCAAGAACATACAGTAGTACACA 57.659 37.500 2.52 0.00 31.96 3.72
735 778 5.805994 GGAGCAAGAACATACAGTAGTACAC 59.194 44.000 2.52 0.00 31.96 2.90
736 779 5.715279 AGGAGCAAGAACATACAGTAGTACA 59.285 40.000 2.52 0.00 31.96 2.90
737 780 6.210287 AGGAGCAAGAACATACAGTAGTAC 57.790 41.667 0.00 0.00 31.96 2.73
738 781 6.436218 TCAAGGAGCAAGAACATACAGTAGTA 59.564 38.462 0.00 0.00 34.10 1.82
739 782 5.246203 TCAAGGAGCAAGAACATACAGTAGT 59.754 40.000 0.00 0.00 0.00 2.73
740 783 5.724328 TCAAGGAGCAAGAACATACAGTAG 58.276 41.667 0.00 0.00 0.00 2.57
741 784 5.738619 TCAAGGAGCAAGAACATACAGTA 57.261 39.130 0.00 0.00 0.00 2.74
742 785 4.623932 TCAAGGAGCAAGAACATACAGT 57.376 40.909 0.00 0.00 0.00 3.55
743 786 6.320171 CAATTCAAGGAGCAAGAACATACAG 58.680 40.000 0.00 0.00 0.00 2.74
744 787 5.335897 GCAATTCAAGGAGCAAGAACATACA 60.336 40.000 0.00 0.00 0.00 2.29
745 788 5.098211 GCAATTCAAGGAGCAAGAACATAC 58.902 41.667 0.00 0.00 0.00 2.39
775 830 1.228552 AGCACCGGGAGTTTGCATT 60.229 52.632 15.50 0.00 38.90 3.56
776 831 1.675641 GAGCACCGGGAGTTTGCAT 60.676 57.895 15.50 1.93 38.90 3.96
777 832 2.281484 GAGCACCGGGAGTTTGCA 60.281 61.111 15.50 0.00 38.90 4.08
778 833 3.056328 GGAGCACCGGGAGTTTGC 61.056 66.667 6.32 6.06 37.26 3.68
794 849 2.717485 CATCTTTGCATCGGCCGG 59.283 61.111 27.83 11.74 40.13 6.13
796 851 1.729881 GACCATCTTTGCATCGGCC 59.270 57.895 0.00 0.00 40.13 6.13
852 907 4.040584 ACAAGACACTAAAACCTCCTCTCC 59.959 45.833 0.00 0.00 0.00 3.71
860 915 6.539103 AGACTTCAGAACAAGACACTAAAACC 59.461 38.462 0.00 0.00 0.00 3.27
897 959 2.603473 TGGTCACAGAGGGTCGGG 60.603 66.667 0.00 0.00 0.00 5.14
1065 1140 1.631595 GAAATCGACGAGCGGCTTC 59.368 57.895 2.97 0.00 41.33 3.86
1150 1225 8.757307 ATCAGGATACCCCTTTTAGATTCATA 57.243 34.615 0.00 0.00 44.85 2.15
1151 1226 7.654287 ATCAGGATACCCCTTTTAGATTCAT 57.346 36.000 0.00 0.00 44.85 2.57
1153 1228 8.661345 ACTAATCAGGATACCCCTTTTAGATTC 58.339 37.037 13.34 0.00 44.85 2.52
1154 1229 8.582891 ACTAATCAGGATACCCCTTTTAGATT 57.417 34.615 13.34 7.91 44.85 2.40
1156 1231 8.931568 GTAACTAATCAGGATACCCCTTTTAGA 58.068 37.037 13.34 0.00 44.85 2.10
1157 1232 8.155510 GGTAACTAATCAGGATACCCCTTTTAG 58.844 40.741 0.00 0.00 44.85 1.85
1159 1234 6.907961 GGTAACTAATCAGGATACCCCTTTT 58.092 40.000 0.00 0.00 44.85 2.27
1178 1351 1.602377 GGTTGTCACAGCACAGGTAAC 59.398 52.381 0.00 0.00 0.00 2.50
1188 1361 2.315925 ACTCACACAGGTTGTCACAG 57.684 50.000 0.00 0.00 35.67 3.66
1203 1376 3.230134 AGGCCTTGCATAAACAAACTCA 58.770 40.909 0.00 0.00 0.00 3.41
1268 1441 0.239347 GTCCATGACTGTTGCTGTGC 59.761 55.000 0.00 0.00 0.00 4.57
1304 1477 9.926751 CTATCATCACAATTATTTGAGACACAC 57.073 33.333 4.42 0.00 35.66 3.82
1400 1573 1.274167 AGGATGCTTGAAACGGACGTA 59.726 47.619 0.00 0.00 0.00 3.57
1403 1576 3.253432 AGAAAAGGATGCTTGAAACGGAC 59.747 43.478 0.00 0.00 0.00 4.79
1406 1579 3.983344 CCAAGAAAAGGATGCTTGAAACG 59.017 43.478 0.00 0.00 41.03 3.60
1412 1585 1.897802 CCAGCCAAGAAAAGGATGCTT 59.102 47.619 0.00 0.00 41.10 3.91
1419 1592 5.728637 ATTAAAGTCCCAGCCAAGAAAAG 57.271 39.130 0.00 0.00 0.00 2.27
1420 1593 5.365314 ACAATTAAAGTCCCAGCCAAGAAAA 59.635 36.000 0.00 0.00 0.00 2.29
1421 1594 4.898861 ACAATTAAAGTCCCAGCCAAGAAA 59.101 37.500 0.00 0.00 0.00 2.52
1422 1595 4.479158 ACAATTAAAGTCCCAGCCAAGAA 58.521 39.130 0.00 0.00 0.00 2.52
1423 1596 4.112634 ACAATTAAAGTCCCAGCCAAGA 57.887 40.909 0.00 0.00 0.00 3.02
1424 1597 4.280677 TGAACAATTAAAGTCCCAGCCAAG 59.719 41.667 0.00 0.00 0.00 3.61
1425 1598 4.219115 TGAACAATTAAAGTCCCAGCCAA 58.781 39.130 0.00 0.00 0.00 4.52
1426 1599 3.826157 CTGAACAATTAAAGTCCCAGCCA 59.174 43.478 0.00 0.00 0.00 4.75
1427 1600 4.079253 TCTGAACAATTAAAGTCCCAGCC 58.921 43.478 0.00 0.00 0.00 4.85
1932 2189 5.013704 AGCATATATATGGACGGAAACCCAA 59.986 40.000 21.50 0.00 35.85 4.12
1938 2195 6.850752 TTCTCAGCATATATATGGACGGAA 57.149 37.500 21.50 10.51 34.32 4.30
1942 2199 9.053840 CATCCATTTCTCAGCATATATATGGAC 57.946 37.037 21.50 8.22 42.01 4.02
1944 2201 8.837389 CACATCCATTTCTCAGCATATATATGG 58.163 37.037 21.50 8.38 34.32 2.74
1945 2202 8.837389 CCACATCCATTTCTCAGCATATATATG 58.163 37.037 17.01 17.01 36.78 1.78
1946 2203 7.501559 GCCACATCCATTTCTCAGCATATATAT 59.498 37.037 0.00 0.00 0.00 0.86
1947 2204 6.825213 GCCACATCCATTTCTCAGCATATATA 59.175 38.462 0.00 0.00 0.00 0.86
1948 2205 5.651139 GCCACATCCATTTCTCAGCATATAT 59.349 40.000 0.00 0.00 0.00 0.86
1962 2220 7.716799 TTAAAATCAAAGTAGCCACATCCAT 57.283 32.000 0.00 0.00 0.00 3.41
1963 2221 7.716799 ATTAAAATCAAAGTAGCCACATCCA 57.283 32.000 0.00 0.00 0.00 3.41
1964 2222 9.683069 CATATTAAAATCAAAGTAGCCACATCC 57.317 33.333 0.00 0.00 0.00 3.51
2274 2533 2.128507 GGGACTCCAGGTAGAGGCG 61.129 68.421 0.00 0.00 43.43 5.52
2276 2535 0.631753 TCAGGGACTCCAGGTAGAGG 59.368 60.000 0.00 0.00 38.26 3.69
2734 2993 9.638239 AAACAACAAACGCATGAAGAAATATAT 57.362 25.926 0.00 0.00 0.00 0.86
2758 3017 1.810151 GCAGCTCGGTGACCAATAAAA 59.190 47.619 1.11 0.00 0.00 1.52
2765 3024 2.031163 ACTTGCAGCTCGGTGACC 59.969 61.111 0.00 0.00 0.00 4.02
2769 3028 1.676014 GGATTACACTTGCAGCTCGGT 60.676 52.381 0.00 0.00 0.00 4.69
2770 3029 1.009829 GGATTACACTTGCAGCTCGG 58.990 55.000 0.00 0.00 0.00 4.63
2771 3030 1.725641 TGGATTACACTTGCAGCTCG 58.274 50.000 0.00 0.00 0.00 5.03
2772 3031 3.077359 AGTTGGATTACACTTGCAGCTC 58.923 45.455 0.00 0.00 0.00 4.09
2773 3032 2.816087 CAGTTGGATTACACTTGCAGCT 59.184 45.455 0.00 0.00 0.00 4.24
2774 3033 2.669391 GCAGTTGGATTACACTTGCAGC 60.669 50.000 0.00 0.00 38.12 5.25
2787 3050 2.637382 TGATAGACACTTGGCAGTTGGA 59.363 45.455 2.89 0.00 0.00 3.53
2929 3205 8.687824 AAATGGTAAAACTGATGCTTTATTCG 57.312 30.769 0.00 0.00 0.00 3.34
2966 3248 7.719193 TGAGTCATGGAAGAACACATTAGAAAA 59.281 33.333 0.00 0.00 0.00 2.29
2967 3249 7.223584 TGAGTCATGGAAGAACACATTAGAAA 58.776 34.615 0.00 0.00 0.00 2.52
2968 3250 6.768483 TGAGTCATGGAAGAACACATTAGAA 58.232 36.000 0.00 0.00 0.00 2.10
2969 3251 6.211384 TCTGAGTCATGGAAGAACACATTAGA 59.789 38.462 0.00 0.00 0.00 2.10
2970 3252 6.401394 TCTGAGTCATGGAAGAACACATTAG 58.599 40.000 0.00 0.00 0.00 1.73
2971 3253 6.358974 TCTGAGTCATGGAAGAACACATTA 57.641 37.500 0.00 0.00 0.00 1.90
2972 3254 5.233083 TCTGAGTCATGGAAGAACACATT 57.767 39.130 0.00 0.00 0.00 2.71
2973 3255 4.897509 TCTGAGTCATGGAAGAACACAT 57.102 40.909 0.00 0.00 0.00 3.21
2974 3256 4.101585 ACTTCTGAGTCATGGAAGAACACA 59.898 41.667 22.39 0.00 39.52 3.72
2975 3257 4.636249 ACTTCTGAGTCATGGAAGAACAC 58.364 43.478 22.39 0.00 39.52 3.32
2976 3258 4.963318 ACTTCTGAGTCATGGAAGAACA 57.037 40.909 22.39 0.00 39.52 3.18
2981 3263 3.141398 GTGCAACTTCTGAGTCATGGAA 58.859 45.455 0.00 0.00 34.21 3.53
3000 3282 0.099968 CCAGCCGAATGCAGATTGTG 59.900 55.000 0.00 0.00 44.83 3.33
3011 3293 0.321564 CTCCATTGTGACCAGCCGAA 60.322 55.000 0.00 0.00 0.00 4.30
3012 3294 1.191489 TCTCCATTGTGACCAGCCGA 61.191 55.000 0.00 0.00 0.00 5.54
3013 3295 0.742281 CTCTCCATTGTGACCAGCCG 60.742 60.000 0.00 0.00 0.00 5.52
3014 3296 0.393537 CCTCTCCATTGTGACCAGCC 60.394 60.000 0.00 0.00 0.00 4.85
3015 3297 0.615331 TCCTCTCCATTGTGACCAGC 59.385 55.000 0.00 0.00 0.00 4.85
3016 3298 2.304180 AGTTCCTCTCCATTGTGACCAG 59.696 50.000 0.00 0.00 0.00 4.00
3017 3299 2.338809 AGTTCCTCTCCATTGTGACCA 58.661 47.619 0.00 0.00 0.00 4.02
3018 3300 3.425162 AAGTTCCTCTCCATTGTGACC 57.575 47.619 0.00 0.00 0.00 4.02
3019 3301 4.223032 TCCTAAGTTCCTCTCCATTGTGAC 59.777 45.833 0.00 0.00 0.00 3.67
3020 3302 4.425772 TCCTAAGTTCCTCTCCATTGTGA 58.574 43.478 0.00 0.00 0.00 3.58
3021 3303 4.223923 ACTCCTAAGTTCCTCTCCATTGTG 59.776 45.833 0.00 0.00 28.74 3.33
3022 3304 4.430441 ACTCCTAAGTTCCTCTCCATTGT 58.570 43.478 0.00 0.00 28.74 2.71
3023 3305 6.070767 TGTTACTCCTAAGTTCCTCTCCATTG 60.071 42.308 0.00 0.00 36.92 2.82
3024 3306 6.023603 TGTTACTCCTAAGTTCCTCTCCATT 58.976 40.000 0.00 0.00 36.92 3.16
3025 3307 5.590818 TGTTACTCCTAAGTTCCTCTCCAT 58.409 41.667 0.00 0.00 36.92 3.41
3026 3308 5.006896 TGTTACTCCTAAGTTCCTCTCCA 57.993 43.478 0.00 0.00 36.92 3.86
3027 3309 5.657302 TGATGTTACTCCTAAGTTCCTCTCC 59.343 44.000 0.00 0.00 36.92 3.71
3028 3310 6.153000 TGTGATGTTACTCCTAAGTTCCTCTC 59.847 42.308 0.00 0.00 36.92 3.20
3029 3311 6.017192 TGTGATGTTACTCCTAAGTTCCTCT 58.983 40.000 0.00 0.00 36.92 3.69
3030 3312 6.100668 GTGTGATGTTACTCCTAAGTTCCTC 58.899 44.000 0.00 0.00 36.92 3.71
3031 3313 5.542635 TGTGTGATGTTACTCCTAAGTTCCT 59.457 40.000 0.00 0.00 36.92 3.36
3032 3314 5.638234 GTGTGTGATGTTACTCCTAAGTTCC 59.362 44.000 0.00 0.00 36.92 3.62
3033 3315 6.456501 AGTGTGTGATGTTACTCCTAAGTTC 58.543 40.000 0.00 0.00 36.92 3.01
3034 3316 6.420913 AGTGTGTGATGTTACTCCTAAGTT 57.579 37.500 0.00 0.00 36.92 2.66
3035 3317 6.041637 TGAAGTGTGTGATGTTACTCCTAAGT 59.958 38.462 0.00 0.00 39.66 2.24
3036 3318 6.455647 TGAAGTGTGTGATGTTACTCCTAAG 58.544 40.000 0.00 0.00 0.00 2.18
3037 3319 6.413783 TGAAGTGTGTGATGTTACTCCTAA 57.586 37.500 0.00 0.00 0.00 2.69
3038 3320 6.413783 TTGAAGTGTGTGATGTTACTCCTA 57.586 37.500 0.00 0.00 0.00 2.94
3039 3321 4.955811 TGAAGTGTGTGATGTTACTCCT 57.044 40.909 0.00 0.00 0.00 3.69
3040 3322 6.649141 TGTATTGAAGTGTGTGATGTTACTCC 59.351 38.462 0.00 0.00 0.00 3.85
3041 3323 7.652300 TGTATTGAAGTGTGTGATGTTACTC 57.348 36.000 0.00 0.00 0.00 2.59
3042 3324 7.715249 AGTTGTATTGAAGTGTGTGATGTTACT 59.285 33.333 0.00 0.00 0.00 2.24
3043 3325 7.861630 AGTTGTATTGAAGTGTGTGATGTTAC 58.138 34.615 0.00 0.00 0.00 2.50
3044 3326 8.445275 AAGTTGTATTGAAGTGTGTGATGTTA 57.555 30.769 0.00 0.00 0.00 2.41
3045 3327 6.942532 AGTTGTATTGAAGTGTGTGATGTT 57.057 33.333 0.00 0.00 0.00 2.71
3046 3328 6.942532 AAGTTGTATTGAAGTGTGTGATGT 57.057 33.333 0.00 0.00 0.00 3.06
3047 3329 6.142798 GCAAAGTTGTATTGAAGTGTGTGATG 59.857 38.462 0.00 0.00 0.00 3.07
3048 3330 6.039717 AGCAAAGTTGTATTGAAGTGTGTGAT 59.960 34.615 0.00 0.00 0.00 3.06
3049 3331 5.356751 AGCAAAGTTGTATTGAAGTGTGTGA 59.643 36.000 0.00 0.00 0.00 3.58
3050 3332 5.581605 AGCAAAGTTGTATTGAAGTGTGTG 58.418 37.500 0.00 0.00 0.00 3.82
3051 3333 5.835113 AGCAAAGTTGTATTGAAGTGTGT 57.165 34.783 0.00 0.00 0.00 3.72
3052 3334 7.862372 ACATAAGCAAAGTTGTATTGAAGTGTG 59.138 33.333 0.00 0.00 0.00 3.82
3053 3335 7.862372 CACATAAGCAAAGTTGTATTGAAGTGT 59.138 33.333 0.00 0.00 0.00 3.55
3054 3336 7.862372 ACACATAAGCAAAGTTGTATTGAAGTG 59.138 33.333 0.00 0.00 0.00 3.16
3055 3337 7.940850 ACACATAAGCAAAGTTGTATTGAAGT 58.059 30.769 0.00 0.00 0.00 3.01
3056 3338 8.075574 TGACACATAAGCAAAGTTGTATTGAAG 58.924 33.333 0.00 0.00 0.00 3.02
3057 3339 7.860373 GTGACACATAAGCAAAGTTGTATTGAA 59.140 33.333 0.00 0.00 0.00 2.69
3058 3340 7.012799 TGTGACACATAAGCAAAGTTGTATTGA 59.987 33.333 3.56 0.00 0.00 2.57
3059 3341 7.138081 TGTGACACATAAGCAAAGTTGTATTG 58.862 34.615 3.56 0.00 0.00 1.90
3060 3342 7.270757 TGTGACACATAAGCAAAGTTGTATT 57.729 32.000 3.56 0.00 0.00 1.89
3061 3343 6.875948 TGTGACACATAAGCAAAGTTGTAT 57.124 33.333 3.56 0.00 0.00 2.29
3062 3344 6.875948 ATGTGACACATAAGCAAAGTTGTA 57.124 33.333 19.53 0.00 36.99 2.41
3063 3345 5.772825 ATGTGACACATAAGCAAAGTTGT 57.227 34.783 19.53 0.00 36.99 3.32
3064 3346 8.746922 AAATATGTGACACATAAGCAAAGTTG 57.253 30.769 27.48 0.00 43.50 3.16
3076 3358 9.591792 CTCTCTCTTCATTAAATATGTGACACA 57.408 33.333 11.41 11.41 0.00 3.72
3077 3359 9.039870 CCTCTCTCTTCATTAAATATGTGACAC 57.960 37.037 0.00 0.00 0.00 3.67
3078 3360 8.762645 ACCTCTCTCTTCATTAAATATGTGACA 58.237 33.333 0.00 0.00 0.00 3.58
3079 3361 9.039870 CACCTCTCTCTTCATTAAATATGTGAC 57.960 37.037 0.00 0.00 0.00 3.67
3080 3362 7.712639 GCACCTCTCTCTTCATTAAATATGTGA 59.287 37.037 0.00 0.00 0.00 3.58
3081 3363 7.714377 AGCACCTCTCTCTTCATTAAATATGTG 59.286 37.037 0.00 0.00 0.00 3.21
3082 3364 7.800092 AGCACCTCTCTCTTCATTAAATATGT 58.200 34.615 0.00 0.00 0.00 2.29
3083 3365 8.557864 CAAGCACCTCTCTCTTCATTAAATATG 58.442 37.037 0.00 0.00 0.00 1.78
3084 3366 8.270744 ACAAGCACCTCTCTCTTCATTAAATAT 58.729 33.333 0.00 0.00 0.00 1.28
3085 3367 7.550551 CACAAGCACCTCTCTCTTCATTAAATA 59.449 37.037 0.00 0.00 0.00 1.40
3086 3368 6.373774 CACAAGCACCTCTCTCTTCATTAAAT 59.626 38.462 0.00 0.00 0.00 1.40
3087 3369 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
3088 3370 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
3089 3371 4.323028 CCACAAGCACCTCTCTCTTCATTA 60.323 45.833 0.00 0.00 0.00 1.90
3090 3372 3.558746 CCACAAGCACCTCTCTCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
3091 3373 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
3092 3374 1.345741 CCACAAGCACCTCTCTCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
3093 3375 1.346068 ACCACAAGCACCTCTCTCTTC 59.654 52.381 0.00 0.00 0.00 2.87
3094 3376 1.428869 ACCACAAGCACCTCTCTCTT 58.571 50.000 0.00 0.00 0.00 2.85
3095 3377 2.300437 GTTACCACAAGCACCTCTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
3096 3378 2.300437 AGTTACCACAAGCACCTCTCTC 59.700 50.000 0.00 0.00 0.00 3.20
3097 3379 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
3098 3380 2.841442 AGTTACCACAAGCACCTCTC 57.159 50.000 0.00 0.00 0.00 3.20
3099 3381 2.028020 GCTAGTTACCACAAGCACCTCT 60.028 50.000 0.00 0.00 35.05 3.69
3100 3382 2.028020 AGCTAGTTACCACAAGCACCTC 60.028 50.000 0.00 0.00 37.44 3.85
3101 3383 1.978580 AGCTAGTTACCACAAGCACCT 59.021 47.619 0.00 0.00 37.44 4.00
3102 3384 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
3103 3385 4.995487 ACTTTAGCTAGTTACCACAAGCAC 59.005 41.667 0.00 0.00 37.44 4.40
3104 3386 5.223449 ACTTTAGCTAGTTACCACAAGCA 57.777 39.130 0.00 0.00 37.44 3.91
3105 3387 6.310711 CACTACTTTAGCTAGTTACCACAAGC 59.689 42.308 0.00 0.00 35.16 4.01
3106 3388 7.600065 TCACTACTTTAGCTAGTTACCACAAG 58.400 38.462 0.00 0.00 0.00 3.16
3107 3389 7.528996 TCACTACTTTAGCTAGTTACCACAA 57.471 36.000 0.00 0.00 0.00 3.33
3108 3390 7.713734 ATCACTACTTTAGCTAGTTACCACA 57.286 36.000 0.00 0.00 0.00 4.17
3109 3391 7.491696 CCAATCACTACTTTAGCTAGTTACCAC 59.508 40.741 0.00 0.00 0.00 4.16
3110 3392 7.398047 TCCAATCACTACTTTAGCTAGTTACCA 59.602 37.037 0.00 0.00 0.00 3.25
3111 3393 7.779073 TCCAATCACTACTTTAGCTAGTTACC 58.221 38.462 0.00 0.00 0.00 2.85
3114 3396 8.136165 CGTATCCAATCACTACTTTAGCTAGTT 58.864 37.037 0.00 0.00 0.00 2.24
3115 3397 7.284944 ACGTATCCAATCACTACTTTAGCTAGT 59.715 37.037 0.00 0.00 0.00 2.57
3116 3398 7.649973 ACGTATCCAATCACTACTTTAGCTAG 58.350 38.462 0.00 0.00 0.00 3.42
3117 3399 7.578310 ACGTATCCAATCACTACTTTAGCTA 57.422 36.000 0.00 0.00 0.00 3.32
3118 3400 6.466885 ACGTATCCAATCACTACTTTAGCT 57.533 37.500 0.00 0.00 0.00 3.32
3119 3401 7.535489 AAACGTATCCAATCACTACTTTAGC 57.465 36.000 0.00 0.00 0.00 3.09
3122 3404 9.148104 GACTAAAACGTATCCAATCACTACTTT 57.852 33.333 0.00 0.00 0.00 2.66
3123 3405 7.763071 GGACTAAAACGTATCCAATCACTACTT 59.237 37.037 0.00 0.00 0.00 2.24
3124 3406 7.263496 GGACTAAAACGTATCCAATCACTACT 58.737 38.462 0.00 0.00 0.00 2.57
3125 3407 6.478016 GGGACTAAAACGTATCCAATCACTAC 59.522 42.308 0.00 0.00 32.45 2.73
3126 3408 6.154877 TGGGACTAAAACGTATCCAATCACTA 59.845 38.462 0.00 0.00 32.45 2.74
3127 3409 5.046159 TGGGACTAAAACGTATCCAATCACT 60.046 40.000 0.00 0.00 32.45 3.41
3131 3413 5.820947 GTCATGGGACTAAAACGTATCCAAT 59.179 40.000 0.00 0.00 40.99 3.16
3257 3539 2.092753 ACATGCGAGTTCTGGATTGGAT 60.093 45.455 0.00 0.00 0.00 3.41
3290 3572 5.163258 GCCCTCTCTCTCCTCATTTAATTCA 60.163 44.000 0.00 0.00 0.00 2.57
3459 3750 2.716424 AGTTCTGGATTGGAGGGTTTGA 59.284 45.455 0.00 0.00 0.00 2.69
3647 3952 1.072159 ACTGTGACCTTCAGCAGCC 59.928 57.895 0.00 0.00 36.50 4.85
3648 3953 1.233285 CCACTGTGACCTTCAGCAGC 61.233 60.000 9.86 0.00 36.50 5.25
3649 3954 0.604780 CCCACTGTGACCTTCAGCAG 60.605 60.000 9.86 0.00 36.50 4.24
3650 3955 1.451504 CCCACTGTGACCTTCAGCA 59.548 57.895 9.86 0.00 36.50 4.41
3651 3956 1.968540 GCCCACTGTGACCTTCAGC 60.969 63.158 9.86 0.00 36.50 4.26
3652 3957 4.386413 GCCCACTGTGACCTTCAG 57.614 61.111 9.86 0.00 38.68 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.