Multiple sequence alignment - TraesCS4A01G092500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G092500 chr4A 100.000 6661 0 0 1 6661 99904394 99911054 0.000000e+00 12301
1 TraesCS4A01G092500 chr4D 94.439 3866 117 28 1 3815 365516106 365512288 0.000000e+00 5858
2 TraesCS4A01G092500 chr4D 94.703 2209 81 13 3813 6009 365512110 365509926 0.000000e+00 3398
3 TraesCS4A01G092500 chr4D 91.365 359 25 1 6303 6661 52065631 52065983 2.790000e-133 486
4 TraesCS4A01G092500 chr4B 95.336 3559 127 23 2419 5953 450119816 450116273 0.000000e+00 5616
5 TraesCS4A01G092500 chr4B 90.666 2464 128 46 1 2406 450122331 450119912 0.000000e+00 3182
6 TraesCS4A01G092500 chr4B 87.838 370 34 5 6300 6661 558928641 558929007 2.220000e-114 424
7 TraesCS4A01G092500 chr7A 91.758 364 30 0 6298 6661 628916835 628916472 2.140000e-139 507
8 TraesCS4A01G092500 chr7A 82.749 371 44 15 6302 6661 37696567 37696928 5.020000e-81 313
9 TraesCS4A01G092500 chr2D 90.529 359 21 3 6303 6661 338672943 338672598 4.710000e-126 462
10 TraesCS4A01G092500 chr2D 88.011 367 30 6 6300 6661 4601378 4601735 7.990000e-114 422
11 TraesCS4A01G092500 chr7D 89.037 374 29 5 6300 6661 561589474 561589101 2.830000e-123 453
12 TraesCS4A01G092500 chr1D 88.736 364 30 4 6300 6661 10373091 10373445 1.030000e-117 435
13 TraesCS4A01G092500 chr6D 87.903 372 35 5 6300 6661 101226171 101226542 4.770000e-116 429
14 TraesCS4A01G092500 chr5A 88.187 364 38 3 6301 6661 639642848 639643209 4.770000e-116 429


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G092500 chr4A 99904394 99911054 6660 False 12301 12301 100.000 1 6661 1 chr4A.!!$F1 6660
1 TraesCS4A01G092500 chr4D 365509926 365516106 6180 True 4628 5858 94.571 1 6009 2 chr4D.!!$R1 6008
2 TraesCS4A01G092500 chr4B 450116273 450122331 6058 True 4399 5616 93.001 1 5953 2 chr4B.!!$R1 5952

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
811 823 0.309612 TTTTTCTCCGCCGTTCAAGC 59.690 50.000 0.00 0.00 0.00 4.01 F
1007 1025 0.188342 AGGTGGTGACAAATGGGCTT 59.812 50.000 0.00 0.00 46.06 4.35 F
1923 1998 1.939255 GCCAGAGAACTTCTAGCATGC 59.061 52.381 10.51 10.51 39.91 4.06 F
2397 2496 1.414919 AGCTGACCAAACCTGTTACGA 59.585 47.619 0.00 0.00 0.00 3.43 F
3754 3972 1.872952 TCAGCGTGACATCAAAACCTG 59.127 47.619 0.00 0.00 0.00 4.00 F
4427 4827 1.008361 AACGGCGTGCATGCAAATTC 61.008 50.000 30.79 13.09 36.28 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1871 1934 0.963962 AGCTTGTGACCAAATGGCTG 59.036 50.000 0.00 0.00 39.32 4.85 R
1952 2027 3.252974 ACAGACGAAATAAGAGCCTGG 57.747 47.619 0.00 0.00 0.00 4.45 R
3319 3537 0.840617 TGTACACAGTCCCAAAGCCA 59.159 50.000 0.00 0.00 0.00 4.75 R
4396 4796 2.035259 GCACGCCGTTTTAAAACAAGTG 60.035 45.455 27.85 27.85 38.81 3.16 R
5374 5779 2.030628 TGCATGAGTTGTGCACATGAAG 60.031 45.455 22.39 9.98 46.76 3.02 R
6348 6765 0.110823 CCGAACTTCGCCGAACTTTG 60.111 55.000 5.61 0.00 38.82 2.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 44 3.775654 GCTCCAGTCCCACTCCCG 61.776 72.222 0.00 0.00 0.00 5.14
188 197 2.906897 CACCACACCACACCCAGC 60.907 66.667 0.00 0.00 0.00 4.85
282 291 1.734388 GCTCCTCTTCCTCCTCGAGC 61.734 65.000 6.99 0.00 36.33 5.03
283 292 1.076632 TCCTCTTCCTCCTCGAGCC 60.077 63.158 6.99 0.00 0.00 4.70
284 293 2.131067 CCTCTTCCTCCTCGAGCCC 61.131 68.421 6.99 0.00 0.00 5.19
285 294 1.076339 CTCTTCCTCCTCGAGCCCT 60.076 63.158 6.99 0.00 0.00 5.19
286 295 1.380515 TCTTCCTCCTCGAGCCCTG 60.381 63.158 6.99 0.00 0.00 4.45
287 296 1.380515 CTTCCTCCTCGAGCCCTGA 60.381 63.158 6.99 0.00 0.00 3.86
288 297 1.380515 TTCCTCCTCGAGCCCTGAG 60.381 63.158 6.99 8.16 0.00 3.35
289 298 3.535962 CCTCCTCGAGCCCTGAGC 61.536 72.222 6.99 0.00 44.25 4.26
290 299 3.535962 CTCCTCGAGCCCTGAGCC 61.536 72.222 6.99 0.00 45.47 4.70
317 327 0.825840 CACCAATCCCAACCCAACGT 60.826 55.000 0.00 0.00 0.00 3.99
395 405 2.105930 AAGATCGCGCTCCTGCTC 59.894 61.111 5.56 0.00 36.97 4.26
466 476 1.408405 GCTCTTAGCTAAACCCCACCC 60.408 57.143 7.74 0.00 38.45 4.61
481 491 0.394899 CACCCAGCTCCAGGATTTCC 60.395 60.000 0.97 0.00 0.00 3.13
518 528 0.387878 CACGCCATCTAGATCCGCTC 60.388 60.000 17.68 0.94 0.00 5.03
520 530 1.594310 GCCATCTAGATCCGCTCCC 59.406 63.158 1.03 0.00 0.00 4.30
553 563 2.041620 TGAGAAACCAGCCTGCCTAATT 59.958 45.455 0.00 0.00 0.00 1.40
629 639 2.771089 TGAAGGCAGCTAGTTCAGTTG 58.229 47.619 0.00 0.00 38.45 3.16
811 823 0.309612 TTTTTCTCCGCCGTTCAAGC 59.690 50.000 0.00 0.00 0.00 4.01
822 834 3.365969 CGCCGTTCAAGCCTTAAGATTTT 60.366 43.478 3.36 0.00 0.00 1.82
824 836 4.621460 GCCGTTCAAGCCTTAAGATTTTTC 59.379 41.667 3.36 0.00 0.00 2.29
825 837 5.161358 CCGTTCAAGCCTTAAGATTTTTCC 58.839 41.667 3.36 0.00 0.00 3.13
841 853 0.319083 TTCCCTGAGCGCGTCTTTAA 59.681 50.000 8.43 0.00 0.00 1.52
909 927 1.037493 GTTGGTTGGTTGGGTTCTCC 58.963 55.000 0.00 0.00 0.00 3.71
935 953 6.809689 CCGATTGTAAAGATGCATACCGTATA 59.190 38.462 0.00 0.00 0.00 1.47
958 976 3.198635 TCCTCATTCATGACCTCTGGAAC 59.801 47.826 0.00 0.00 32.50 3.62
1007 1025 0.188342 AGGTGGTGACAAATGGGCTT 59.812 50.000 0.00 0.00 46.06 4.35
1058 1076 6.053650 TCTTTATTCTGATCATCCTGCACTG 58.946 40.000 0.00 0.00 0.00 3.66
1059 1077 2.704464 TTCTGATCATCCTGCACTGG 57.296 50.000 0.00 0.00 0.00 4.00
1169 1187 5.049129 GCTTATCCAATACTGATCTTGCACC 60.049 44.000 0.00 0.00 0.00 5.01
1295 1313 3.013921 TGGAAGGGTGTTAAATGCGATC 58.986 45.455 0.00 0.00 0.00 3.69
1315 1333 2.095008 TCGTCACAGCAAGAGAGTGATC 60.095 50.000 0.00 0.00 43.35 2.92
1356 1374 9.668497 AGAAAACCACTCTGTATATTAACTTCC 57.332 33.333 0.00 0.00 0.00 3.46
1357 1375 9.668497 GAAAACCACTCTGTATATTAACTTCCT 57.332 33.333 0.00 0.00 0.00 3.36
1361 1379 9.668497 ACCACTCTGTATATTAACTTCCTTTTC 57.332 33.333 0.00 0.00 0.00 2.29
1362 1380 8.818057 CCACTCTGTATATTAACTTCCTTTTCG 58.182 37.037 0.00 0.00 0.00 3.46
1363 1381 9.582431 CACTCTGTATATTAACTTCCTTTTCGA 57.418 33.333 0.00 0.00 0.00 3.71
1474 1505 4.993705 TGGACACCATTTCCTAGTTTCT 57.006 40.909 0.00 0.00 33.84 2.52
1667 1699 4.850680 ACTTCCCGCCTTGTATATCAAAA 58.149 39.130 0.00 0.00 35.48 2.44
1699 1733 7.393515 GGTCTCTGATAAAGGTGGTTTTATGTT 59.606 37.037 0.00 0.00 34.31 2.71
1899 1974 5.437289 TTTGGTCACAAGCTTCTTGTATG 57.563 39.130 11.34 2.17 37.97 2.39
1923 1998 1.939255 GCCAGAGAACTTCTAGCATGC 59.061 52.381 10.51 10.51 39.91 4.06
2397 2496 1.414919 AGCTGACCAAACCTGTTACGA 59.585 47.619 0.00 0.00 0.00 3.43
2614 2796 4.260948 GCATTGTGCCATAAGCTACTCTTC 60.261 45.833 0.00 0.00 44.23 2.87
2818 3008 8.573035 GTCTAATATTTTTGGTTGACAAGGTCA 58.427 33.333 0.00 0.00 40.82 4.02
2831 3021 6.154203 TGACAAGGTCAAATGTGCATTTAA 57.846 33.333 9.48 0.00 39.78 1.52
2834 3024 6.757237 ACAAGGTCAAATGTGCATTTAATCA 58.243 32.000 9.48 0.00 38.84 2.57
2835 3025 7.388437 ACAAGGTCAAATGTGCATTTAATCAT 58.612 30.769 9.48 0.00 38.84 2.45
2836 3026 7.879160 ACAAGGTCAAATGTGCATTTAATCATT 59.121 29.630 9.48 0.00 38.84 2.57
2837 3027 7.837202 AGGTCAAATGTGCATTTAATCATTG 57.163 32.000 9.48 0.00 38.84 2.82
3090 3308 5.126384 TCTGGGGTTGTTTTCTGTACAAAAG 59.874 40.000 0.00 0.00 37.26 2.27
3319 3537 5.134725 AGGAAAATATCATTGGAGCAGGT 57.865 39.130 0.00 0.00 0.00 4.00
3633 3851 6.563422 TCCAATTATTCATAGTTGCAGTTGC 58.437 36.000 0.00 0.00 42.50 4.17
3754 3972 1.872952 TCAGCGTGACATCAAAACCTG 59.127 47.619 0.00 0.00 0.00 4.00
3808 4026 4.033358 CGCTATGCAAGGAAAAGAGTACAG 59.967 45.833 0.00 0.00 0.00 2.74
3873 4271 6.349897 AGAGGATCCTTAGAGTAGACCTTT 57.650 41.667 17.42 0.00 33.66 3.11
3890 4288 6.601332 AGACCTTTACCTTCTCAATCAAACA 58.399 36.000 0.00 0.00 0.00 2.83
4023 4423 7.026562 CACGTGCAATGTAAAGGATGAATAAA 58.973 34.615 0.82 0.00 31.53 1.40
4129 4529 2.433970 GAGGGAGATCAGAGGTCCTTTG 59.566 54.545 2.86 2.86 0.00 2.77
4142 4542 7.565029 TCAGAGGTCCTTTGATCAATAGTATCA 59.435 37.037 9.40 0.00 0.00 2.15
4180 4580 4.931661 ATTGCAGGAGCCTAATTCATTG 57.068 40.909 0.00 0.00 41.13 2.82
4272 4672 6.494842 TGTTTGAGTCAAGTAAGAACAATGC 58.505 36.000 5.56 0.00 0.00 3.56
4323 4723 8.619683 AATAGTAACCTATGTCTACCCAAACT 57.380 34.615 0.00 0.00 34.07 2.66
4396 4796 1.073199 CAAGGTCCACTGGTCCACC 59.927 63.158 13.22 5.35 33.39 4.61
4427 4827 1.008361 AACGGCGTGCATGCAAATTC 61.008 50.000 30.79 13.09 36.28 2.17
4463 4863 7.967908 TCTCTCTTTTGTCCTTGTTTATCTCT 58.032 34.615 0.00 0.00 0.00 3.10
4773 5175 3.560068 ACAAGTAACTTTTGCTCAGGTCG 59.440 43.478 0.00 0.00 0.00 4.79
4822 5226 6.014584 ACAGGAATAACTTTTTAAAGCCCAGG 60.015 38.462 2.23 0.00 39.63 4.45
4834 5238 1.873863 GCCCAGGCTAACGTTTCAC 59.126 57.895 5.91 0.00 38.26 3.18
5032 5437 2.912771 TCAGACTTCGGACTTGCAAAA 58.087 42.857 0.00 0.00 0.00 2.44
5123 5528 5.856455 GGTATGTGAAAGTTGTTCCATTTCG 59.144 40.000 0.00 0.00 36.04 3.46
5155 5560 4.275689 TGAGAACGAAAATGCACACTTCAT 59.724 37.500 0.00 0.00 0.00 2.57
5374 5779 7.361542 GGGTACGACCTTTTTATTTCCTTTCTC 60.362 40.741 0.00 0.00 38.64 2.87
5450 5857 5.305585 GGTTAACTTGCTATATGGCAGCTA 58.694 41.667 13.83 4.61 43.39 3.32
5636 6043 2.542597 GATGTAATTACACCGTGCGGA 58.457 47.619 20.26 0.00 39.30 5.54
5779 6186 3.355378 TGTGGAGGCACATTCCATTTAG 58.645 45.455 0.00 0.00 45.85 1.85
5909 6321 5.810587 CCACGCTACAGACTGTTATATGTTT 59.189 40.000 14.50 0.00 0.00 2.83
5910 6322 6.237835 CCACGCTACAGACTGTTATATGTTTG 60.238 42.308 14.50 1.32 0.00 2.93
5911 6323 5.810587 ACGCTACAGACTGTTATATGTTTGG 59.189 40.000 14.50 0.00 0.00 3.28
5953 6365 4.271661 TGGAGATTGATGTGCTTGCATTA 58.728 39.130 0.00 0.00 0.00 1.90
5980 6397 5.883503 TTTAGGTGTTCTTTTGTGTTCGT 57.116 34.783 0.00 0.00 0.00 3.85
5982 6399 4.776795 AGGTGTTCTTTTGTGTTCGTTT 57.223 36.364 0.00 0.00 0.00 3.60
6000 6417 4.336993 TCGTTTAGGTTTTGTGTCATGCTT 59.663 37.500 0.00 0.00 0.00 3.91
6009 6426 6.294731 GGTTTTGTGTCATGCTTAGGAAGATT 60.295 38.462 0.00 0.00 0.00 2.40
6010 6427 7.094377 GGTTTTGTGTCATGCTTAGGAAGATTA 60.094 37.037 0.00 0.00 0.00 1.75
6011 6428 7.994425 TTTGTGTCATGCTTAGGAAGATTAA 57.006 32.000 0.00 0.00 0.00 1.40
6012 6429 7.615582 TTGTGTCATGCTTAGGAAGATTAAG 57.384 36.000 0.00 0.00 0.00 1.85
6013 6430 6.115446 TGTGTCATGCTTAGGAAGATTAAGG 58.885 40.000 0.00 0.00 0.00 2.69
6014 6431 6.116126 GTGTCATGCTTAGGAAGATTAAGGT 58.884 40.000 0.00 0.00 0.00 3.50
6015 6432 6.599638 GTGTCATGCTTAGGAAGATTAAGGTT 59.400 38.462 0.00 0.00 0.00 3.50
6016 6433 6.823689 TGTCATGCTTAGGAAGATTAAGGTTC 59.176 38.462 0.00 0.00 0.00 3.62
6017 6434 7.051000 GTCATGCTTAGGAAGATTAAGGTTCT 58.949 38.462 0.00 0.00 0.00 3.01
6018 6435 7.225734 GTCATGCTTAGGAAGATTAAGGTTCTC 59.774 40.741 0.00 0.00 0.00 2.87
6019 6436 5.990668 TGCTTAGGAAGATTAAGGTTCTCC 58.009 41.667 0.00 0.00 0.00 3.71
6020 6437 5.104485 TGCTTAGGAAGATTAAGGTTCTCCC 60.104 44.000 0.00 0.00 0.00 4.30
6021 6438 5.687970 GCTTAGGAAGATTAAGGTTCTCCCC 60.688 48.000 0.00 0.00 0.00 4.81
6022 6439 2.772515 AGGAAGATTAAGGTTCTCCCCG 59.227 50.000 0.92 0.00 0.00 5.73
6023 6440 2.562635 GAAGATTAAGGTTCTCCCCGC 58.437 52.381 0.00 0.00 0.00 6.13
6024 6441 1.580059 AGATTAAGGTTCTCCCCGCA 58.420 50.000 0.00 0.00 0.00 5.69
6025 6442 2.127708 AGATTAAGGTTCTCCCCGCAT 58.872 47.619 0.00 0.00 0.00 4.73
6026 6443 3.314693 AGATTAAGGTTCTCCCCGCATA 58.685 45.455 0.00 0.00 0.00 3.14
6027 6444 3.325135 AGATTAAGGTTCTCCCCGCATAG 59.675 47.826 0.00 0.00 0.00 2.23
6028 6445 0.756903 TAAGGTTCTCCCCGCATAGC 59.243 55.000 0.00 0.00 0.00 2.97
6029 6446 1.984288 AAGGTTCTCCCCGCATAGCC 61.984 60.000 0.00 0.00 0.00 3.93
6030 6447 2.111251 GTTCTCCCCGCATAGCCC 59.889 66.667 0.00 0.00 0.00 5.19
6031 6448 3.168528 TTCTCCCCGCATAGCCCC 61.169 66.667 0.00 0.00 0.00 5.80
6032 6449 3.714078 TTCTCCCCGCATAGCCCCT 62.714 63.158 0.00 0.00 0.00 4.79
6033 6450 3.631046 CTCCCCGCATAGCCCCTC 61.631 72.222 0.00 0.00 0.00 4.30
6034 6451 4.172232 TCCCCGCATAGCCCCTCT 62.172 66.667 0.00 0.00 0.00 3.69
6035 6452 3.631046 CCCCGCATAGCCCCTCTC 61.631 72.222 0.00 0.00 0.00 3.20
6036 6453 2.525381 CCCGCATAGCCCCTCTCT 60.525 66.667 0.00 0.00 0.00 3.10
6037 6454 2.143419 CCCGCATAGCCCCTCTCTT 61.143 63.158 0.00 0.00 0.00 2.85
6038 6455 1.070445 CCGCATAGCCCCTCTCTTG 59.930 63.158 0.00 0.00 0.00 3.02
6039 6456 1.070445 CGCATAGCCCCTCTCTTGG 59.930 63.158 0.00 0.00 0.00 3.61
6040 6457 1.690219 CGCATAGCCCCTCTCTTGGT 61.690 60.000 0.00 0.00 0.00 3.67
6041 6458 0.179034 GCATAGCCCCTCTCTTGGTG 60.179 60.000 0.00 0.00 0.00 4.17
6042 6459 0.471617 CATAGCCCCTCTCTTGGTGG 59.528 60.000 0.00 0.00 0.00 4.61
6043 6460 0.695803 ATAGCCCCTCTCTTGGTGGG 60.696 60.000 0.00 0.00 45.67 4.61
6044 6461 2.119847 TAGCCCCTCTCTTGGTGGGT 62.120 60.000 0.00 0.00 44.87 4.51
6045 6462 3.081554 CCCCTCTCTTGGTGGGTG 58.918 66.667 0.00 0.00 44.87 4.61
6046 6463 2.352805 CCCTCTCTTGGTGGGTGC 59.647 66.667 0.00 0.00 42.24 5.01
6047 6464 2.528818 CCCTCTCTTGGTGGGTGCA 61.529 63.158 0.00 0.00 42.24 4.57
6048 6465 1.302832 CCTCTCTTGGTGGGTGCAC 60.303 63.158 8.80 8.80 0.00 4.57
6049 6466 1.302832 CTCTCTTGGTGGGTGCACC 60.303 63.158 28.57 28.57 45.20 5.01
6050 6467 1.770110 TCTCTTGGTGGGTGCACCT 60.770 57.895 33.91 0.00 45.21 4.00
6051 6468 0.472925 TCTCTTGGTGGGTGCACCTA 60.473 55.000 33.91 27.34 45.21 3.08
6052 6469 0.620556 CTCTTGGTGGGTGCACCTAT 59.379 55.000 33.91 0.00 45.21 2.57
6053 6470 0.618458 TCTTGGTGGGTGCACCTATC 59.382 55.000 33.91 29.39 45.21 2.08
6054 6471 0.744414 CTTGGTGGGTGCACCTATCG 60.744 60.000 33.91 14.11 45.21 2.92
6055 6472 1.485294 TTGGTGGGTGCACCTATCGT 61.485 55.000 33.91 0.00 45.21 3.73
6056 6473 1.153429 GGTGGGTGCACCTATCGTC 60.153 63.158 33.91 16.74 41.84 4.20
6057 6474 1.594833 GTGGGTGCACCTATCGTCA 59.405 57.895 33.91 19.92 41.11 4.35
6058 6475 0.178068 GTGGGTGCACCTATCGTCAT 59.822 55.000 33.91 0.00 41.11 3.06
6059 6476 0.464036 TGGGTGCACCTATCGTCATC 59.536 55.000 33.91 15.26 41.11 2.92
6060 6477 0.464036 GGGTGCACCTATCGTCATCA 59.536 55.000 33.91 0.00 35.85 3.07
6061 6478 1.539065 GGGTGCACCTATCGTCATCAG 60.539 57.143 33.91 0.00 35.85 2.90
6062 6479 1.409064 GGTGCACCTATCGTCATCAGA 59.591 52.381 29.12 0.00 0.00 3.27
6063 6480 2.544694 GGTGCACCTATCGTCATCAGAG 60.545 54.545 29.12 0.00 0.00 3.35
6064 6481 1.683385 TGCACCTATCGTCATCAGAGG 59.317 52.381 0.00 0.00 0.00 3.69
6065 6482 1.000283 GCACCTATCGTCATCAGAGGG 60.000 57.143 0.00 0.00 0.00 4.30
6066 6483 2.311463 CACCTATCGTCATCAGAGGGT 58.689 52.381 0.00 0.00 0.00 4.34
6067 6484 2.035193 CACCTATCGTCATCAGAGGGTG 59.965 54.545 0.00 0.00 38.26 4.61
6068 6485 2.311463 CCTATCGTCATCAGAGGGTGT 58.689 52.381 0.00 0.00 0.00 4.16
6069 6486 2.035193 CCTATCGTCATCAGAGGGTGTG 59.965 54.545 0.00 0.00 0.00 3.82
6070 6487 1.561643 ATCGTCATCAGAGGGTGTGT 58.438 50.000 0.00 0.00 0.00 3.72
6071 6488 0.603065 TCGTCATCAGAGGGTGTGTG 59.397 55.000 0.00 0.00 0.00 3.82
6072 6489 0.390340 CGTCATCAGAGGGTGTGTGG 60.390 60.000 0.00 0.00 0.00 4.17
6073 6490 0.976641 GTCATCAGAGGGTGTGTGGA 59.023 55.000 0.00 0.00 0.00 4.02
6074 6491 1.066573 GTCATCAGAGGGTGTGTGGAG 60.067 57.143 0.00 0.00 0.00 3.86
6075 6492 0.251354 CATCAGAGGGTGTGTGGAGG 59.749 60.000 0.00 0.00 0.00 4.30
6076 6493 0.178891 ATCAGAGGGTGTGTGGAGGT 60.179 55.000 0.00 0.00 0.00 3.85
6077 6494 0.399949 TCAGAGGGTGTGTGGAGGTT 60.400 55.000 0.00 0.00 0.00 3.50
6078 6495 0.250467 CAGAGGGTGTGTGGAGGTTG 60.250 60.000 0.00 0.00 0.00 3.77
6079 6496 1.073199 GAGGGTGTGTGGAGGTTGG 59.927 63.158 0.00 0.00 0.00 3.77
6080 6497 1.385347 AGGGTGTGTGGAGGTTGGA 60.385 57.895 0.00 0.00 0.00 3.53
6081 6498 0.772124 AGGGTGTGTGGAGGTTGGAT 60.772 55.000 0.00 0.00 0.00 3.41
6082 6499 0.112412 GGGTGTGTGGAGGTTGGATT 59.888 55.000 0.00 0.00 0.00 3.01
6083 6500 1.534729 GGTGTGTGGAGGTTGGATTC 58.465 55.000 0.00 0.00 0.00 2.52
6084 6501 1.202879 GGTGTGTGGAGGTTGGATTCA 60.203 52.381 0.00 0.00 0.00 2.57
6085 6502 2.154462 GTGTGTGGAGGTTGGATTCAG 58.846 52.381 0.00 0.00 0.00 3.02
6086 6503 1.774254 TGTGTGGAGGTTGGATTCAGT 59.226 47.619 0.00 0.00 0.00 3.41
6087 6504 2.224523 TGTGTGGAGGTTGGATTCAGTC 60.225 50.000 0.00 0.00 0.00 3.51
6088 6505 2.054021 TGTGGAGGTTGGATTCAGTCA 58.946 47.619 0.00 0.00 0.00 3.41
6089 6506 2.038952 TGTGGAGGTTGGATTCAGTCAG 59.961 50.000 0.00 0.00 0.00 3.51
6090 6507 1.003580 TGGAGGTTGGATTCAGTCAGC 59.996 52.381 0.00 0.00 0.00 4.26
6091 6508 1.280421 GGAGGTTGGATTCAGTCAGCT 59.720 52.381 0.00 0.00 0.00 4.24
6092 6509 2.290577 GGAGGTTGGATTCAGTCAGCTT 60.291 50.000 0.00 0.00 0.00 3.74
6093 6510 3.416156 GAGGTTGGATTCAGTCAGCTTT 58.584 45.455 0.00 0.00 0.00 3.51
6094 6511 3.416156 AGGTTGGATTCAGTCAGCTTTC 58.584 45.455 0.00 0.00 0.00 2.62
6095 6512 2.160417 GGTTGGATTCAGTCAGCTTTCG 59.840 50.000 0.00 0.00 0.00 3.46
6096 6513 2.808543 GTTGGATTCAGTCAGCTTTCGT 59.191 45.455 0.00 0.00 0.00 3.85
6097 6514 2.688507 TGGATTCAGTCAGCTTTCGTC 58.311 47.619 0.00 0.00 0.00 4.20
6098 6515 2.300152 TGGATTCAGTCAGCTTTCGTCT 59.700 45.455 0.00 0.00 0.00 4.18
6099 6516 3.244215 TGGATTCAGTCAGCTTTCGTCTT 60.244 43.478 0.00 0.00 0.00 3.01
6100 6517 3.748568 GGATTCAGTCAGCTTTCGTCTTT 59.251 43.478 0.00 0.00 0.00 2.52
6101 6518 4.377841 GGATTCAGTCAGCTTTCGTCTTTG 60.378 45.833 0.00 0.00 0.00 2.77
6102 6519 2.483876 TCAGTCAGCTTTCGTCTTTGG 58.516 47.619 0.00 0.00 0.00 3.28
6103 6520 2.158957 TCAGTCAGCTTTCGTCTTTGGT 60.159 45.455 0.00 0.00 0.00 3.67
6104 6521 2.032549 CAGTCAGCTTTCGTCTTTGGTG 60.033 50.000 0.00 0.00 0.00 4.17
6105 6522 1.264288 GTCAGCTTTCGTCTTTGGTGG 59.736 52.381 0.00 0.00 0.00 4.61
6106 6523 1.140052 TCAGCTTTCGTCTTTGGTGGA 59.860 47.619 0.00 0.00 0.00 4.02
6107 6524 2.154462 CAGCTTTCGTCTTTGGTGGAT 58.846 47.619 0.00 0.00 0.00 3.41
6108 6525 2.554032 CAGCTTTCGTCTTTGGTGGATT 59.446 45.455 0.00 0.00 0.00 3.01
6109 6526 3.004734 CAGCTTTCGTCTTTGGTGGATTT 59.995 43.478 0.00 0.00 0.00 2.17
6110 6527 3.004734 AGCTTTCGTCTTTGGTGGATTTG 59.995 43.478 0.00 0.00 0.00 2.32
6111 6528 3.243401 GCTTTCGTCTTTGGTGGATTTGT 60.243 43.478 0.00 0.00 0.00 2.83
6112 6529 4.736464 GCTTTCGTCTTTGGTGGATTTGTT 60.736 41.667 0.00 0.00 0.00 2.83
6113 6530 4.561735 TTCGTCTTTGGTGGATTTGTTC 57.438 40.909 0.00 0.00 0.00 3.18
6114 6531 2.546368 TCGTCTTTGGTGGATTTGTTCG 59.454 45.455 0.00 0.00 0.00 3.95
6115 6532 2.289547 CGTCTTTGGTGGATTTGTTCGT 59.710 45.455 0.00 0.00 0.00 3.85
6116 6533 3.606153 CGTCTTTGGTGGATTTGTTCGTC 60.606 47.826 0.00 0.00 0.00 4.20
6117 6534 3.564225 GTCTTTGGTGGATTTGTTCGTCT 59.436 43.478 0.00 0.00 0.00 4.18
6118 6535 3.563808 TCTTTGGTGGATTTGTTCGTCTG 59.436 43.478 0.00 0.00 0.00 3.51
6119 6536 2.631160 TGGTGGATTTGTTCGTCTGT 57.369 45.000 0.00 0.00 0.00 3.41
6120 6537 2.925724 TGGTGGATTTGTTCGTCTGTT 58.074 42.857 0.00 0.00 0.00 3.16
6121 6538 3.283751 TGGTGGATTTGTTCGTCTGTTT 58.716 40.909 0.00 0.00 0.00 2.83
6122 6539 3.697045 TGGTGGATTTGTTCGTCTGTTTT 59.303 39.130 0.00 0.00 0.00 2.43
6123 6540 4.158764 TGGTGGATTTGTTCGTCTGTTTTT 59.841 37.500 0.00 0.00 0.00 1.94
6124 6541 5.357314 TGGTGGATTTGTTCGTCTGTTTTTA 59.643 36.000 0.00 0.00 0.00 1.52
6125 6542 5.912955 GGTGGATTTGTTCGTCTGTTTTTAG 59.087 40.000 0.00 0.00 0.00 1.85
6126 6543 5.912955 GTGGATTTGTTCGTCTGTTTTTAGG 59.087 40.000 0.00 0.00 0.00 2.69
6127 6544 5.591067 TGGATTTGTTCGTCTGTTTTTAGGT 59.409 36.000 0.00 0.00 0.00 3.08
6128 6545 6.095720 TGGATTTGTTCGTCTGTTTTTAGGTT 59.904 34.615 0.00 0.00 0.00 3.50
6129 6546 6.416750 GGATTTGTTCGTCTGTTTTTAGGTTG 59.583 38.462 0.00 0.00 0.00 3.77
6130 6547 6.497785 TTTGTTCGTCTGTTTTTAGGTTGA 57.502 33.333 0.00 0.00 0.00 3.18
6131 6548 6.497785 TTGTTCGTCTGTTTTTAGGTTGAA 57.502 33.333 0.00 0.00 0.00 2.69
6132 6549 6.687081 TGTTCGTCTGTTTTTAGGTTGAAT 57.313 33.333 0.00 0.00 0.00 2.57
6133 6550 6.721321 TGTTCGTCTGTTTTTAGGTTGAATC 58.279 36.000 0.00 0.00 0.00 2.52
6134 6551 5.934935 TCGTCTGTTTTTAGGTTGAATCC 57.065 39.130 0.00 0.00 0.00 3.01
6135 6552 5.617252 TCGTCTGTTTTTAGGTTGAATCCT 58.383 37.500 0.00 0.00 41.20 3.24
6136 6553 6.059484 TCGTCTGTTTTTAGGTTGAATCCTT 58.941 36.000 0.00 0.00 38.86 3.36
6137 6554 6.204108 TCGTCTGTTTTTAGGTTGAATCCTTC 59.796 38.462 0.00 0.00 38.86 3.46
6138 6555 6.204882 CGTCTGTTTTTAGGTTGAATCCTTCT 59.795 38.462 0.00 0.00 38.86 2.85
6139 6556 7.363431 GTCTGTTTTTAGGTTGAATCCTTCTG 58.637 38.462 0.00 0.00 38.86 3.02
6140 6557 7.228706 GTCTGTTTTTAGGTTGAATCCTTCTGA 59.771 37.037 0.00 0.00 38.86 3.27
6141 6558 7.228706 TCTGTTTTTAGGTTGAATCCTTCTGAC 59.771 37.037 0.00 0.00 38.86 3.51
6142 6559 6.831353 TGTTTTTAGGTTGAATCCTTCTGACA 59.169 34.615 0.00 0.00 38.86 3.58
6143 6560 7.505585 TGTTTTTAGGTTGAATCCTTCTGACAT 59.494 33.333 0.00 0.00 38.86 3.06
6144 6561 9.010029 GTTTTTAGGTTGAATCCTTCTGACATA 57.990 33.333 0.00 0.00 38.86 2.29
6145 6562 8.561738 TTTTAGGTTGAATCCTTCTGACATAC 57.438 34.615 0.00 0.00 38.86 2.39
6146 6563 4.759782 AGGTTGAATCCTTCTGACATACG 58.240 43.478 0.00 0.00 33.52 3.06
6147 6564 3.309954 GGTTGAATCCTTCTGACATACGC 59.690 47.826 0.00 0.00 0.00 4.42
6148 6565 4.184629 GTTGAATCCTTCTGACATACGCT 58.815 43.478 0.00 0.00 0.00 5.07
6149 6566 4.471904 TGAATCCTTCTGACATACGCTT 57.528 40.909 0.00 0.00 0.00 4.68
6150 6567 4.832248 TGAATCCTTCTGACATACGCTTT 58.168 39.130 0.00 0.00 0.00 3.51
6151 6568 4.870426 TGAATCCTTCTGACATACGCTTTC 59.130 41.667 0.00 0.00 0.00 2.62
6152 6569 4.744795 ATCCTTCTGACATACGCTTTCT 57.255 40.909 0.00 0.00 0.00 2.52
6153 6570 5.854010 ATCCTTCTGACATACGCTTTCTA 57.146 39.130 0.00 0.00 0.00 2.10
6154 6571 5.854010 TCCTTCTGACATACGCTTTCTAT 57.146 39.130 0.00 0.00 0.00 1.98
6155 6572 5.833082 TCCTTCTGACATACGCTTTCTATC 58.167 41.667 0.00 0.00 0.00 2.08
6156 6573 5.594725 TCCTTCTGACATACGCTTTCTATCT 59.405 40.000 0.00 0.00 0.00 1.98
6157 6574 5.689514 CCTTCTGACATACGCTTTCTATCTG 59.310 44.000 0.00 0.00 0.00 2.90
6158 6575 5.836821 TCTGACATACGCTTTCTATCTGT 57.163 39.130 0.00 0.00 0.00 3.41
6159 6576 5.822278 TCTGACATACGCTTTCTATCTGTC 58.178 41.667 0.00 0.00 33.79 3.51
6160 6577 5.590663 TCTGACATACGCTTTCTATCTGTCT 59.409 40.000 0.00 0.00 34.20 3.41
6161 6578 6.766467 TCTGACATACGCTTTCTATCTGTCTA 59.234 38.462 0.00 0.00 34.20 2.59
6162 6579 7.445707 TCTGACATACGCTTTCTATCTGTCTAT 59.554 37.037 0.00 0.00 34.20 1.98
6163 6580 7.941919 TGACATACGCTTTCTATCTGTCTATT 58.058 34.615 0.00 0.00 34.20 1.73
6164 6581 9.063615 TGACATACGCTTTCTATCTGTCTATTA 57.936 33.333 0.00 0.00 34.20 0.98
6165 6582 9.332301 GACATACGCTTTCTATCTGTCTATTAC 57.668 37.037 0.00 0.00 31.25 1.89
6166 6583 8.847196 ACATACGCTTTCTATCTGTCTATTACA 58.153 33.333 0.00 0.00 36.42 2.41
6167 6584 9.678941 CATACGCTTTCTATCTGTCTATTACAA 57.321 33.333 0.00 0.00 37.74 2.41
6168 6585 7.988904 ACGCTTTCTATCTGTCTATTACAAC 57.011 36.000 0.00 0.00 37.74 3.32
6169 6586 6.691818 ACGCTTTCTATCTGTCTATTACAACG 59.308 38.462 0.00 0.00 37.74 4.10
6170 6587 6.691818 CGCTTTCTATCTGTCTATTACAACGT 59.308 38.462 0.00 0.00 37.74 3.99
6171 6588 7.305475 CGCTTTCTATCTGTCTATTACAACGTG 60.305 40.741 0.00 0.00 37.74 4.49
6172 6589 7.701078 GCTTTCTATCTGTCTATTACAACGTGA 59.299 37.037 0.00 0.00 37.74 4.35
6173 6590 9.737427 CTTTCTATCTGTCTATTACAACGTGAT 57.263 33.333 0.00 0.00 37.74 3.06
6176 6593 9.516314 TCTATCTGTCTATTACAACGTGATTTG 57.484 33.333 0.00 0.00 37.74 2.32
6177 6594 6.403333 TCTGTCTATTACAACGTGATTTGC 57.597 37.500 0.00 0.00 37.74 3.68
6178 6595 6.163476 TCTGTCTATTACAACGTGATTTGCT 58.837 36.000 0.00 0.00 37.74 3.91
6179 6596 6.649141 TCTGTCTATTACAACGTGATTTGCTT 59.351 34.615 0.00 0.00 37.74 3.91
6180 6597 6.598525 TGTCTATTACAACGTGATTTGCTTG 58.401 36.000 0.00 0.00 34.29 4.01
6181 6598 6.425417 TGTCTATTACAACGTGATTTGCTTGA 59.575 34.615 0.00 0.00 34.29 3.02
6182 6599 7.041712 TGTCTATTACAACGTGATTTGCTTGAA 60.042 33.333 0.00 0.00 34.29 2.69
6183 6600 7.962918 GTCTATTACAACGTGATTTGCTTGAAT 59.037 33.333 0.00 0.00 0.00 2.57
6184 6601 8.175069 TCTATTACAACGTGATTTGCTTGAATC 58.825 33.333 0.00 0.00 36.73 2.52
6185 6602 3.900941 ACAACGTGATTTGCTTGAATCC 58.099 40.909 0.00 0.00 35.61 3.01
6186 6603 3.317711 ACAACGTGATTTGCTTGAATCCA 59.682 39.130 0.00 0.00 35.61 3.41
6187 6604 3.837213 ACGTGATTTGCTTGAATCCAG 57.163 42.857 0.00 3.51 35.61 3.86
6188 6605 3.149196 ACGTGATTTGCTTGAATCCAGT 58.851 40.909 0.00 3.96 35.61 4.00
6189 6606 3.058016 ACGTGATTTGCTTGAATCCAGTG 60.058 43.478 0.00 0.00 35.61 3.66
6190 6607 3.189080 CGTGATTTGCTTGAATCCAGTGA 59.811 43.478 0.00 0.00 35.61 3.41
6191 6608 4.142534 CGTGATTTGCTTGAATCCAGTGAT 60.143 41.667 0.00 0.00 35.61 3.06
6192 6609 5.338365 GTGATTTGCTTGAATCCAGTGATC 58.662 41.667 0.00 0.00 35.61 2.92
6193 6610 5.011586 TGATTTGCTTGAATCCAGTGATCA 58.988 37.500 0.00 0.00 35.61 2.92
6194 6611 4.771590 TTTGCTTGAATCCAGTGATCAC 57.228 40.909 18.47 18.47 0.00 3.06
6195 6612 2.349590 TGCTTGAATCCAGTGATCACG 58.650 47.619 19.85 14.20 36.20 4.35
6196 6613 1.667724 GCTTGAATCCAGTGATCACGG 59.332 52.381 22.83 22.83 36.20 4.94
6197 6614 1.667724 CTTGAATCCAGTGATCACGGC 59.332 52.381 23.58 14.60 36.20 5.68
6198 6615 0.612744 TGAATCCAGTGATCACGGCA 59.387 50.000 23.58 11.31 36.20 5.69
6199 6616 1.293924 GAATCCAGTGATCACGGCAG 58.706 55.000 23.58 14.55 36.20 4.85
6200 6617 0.745845 AATCCAGTGATCACGGCAGC 60.746 55.000 23.58 1.89 36.20 5.25
6201 6618 1.902765 ATCCAGTGATCACGGCAGCA 61.903 55.000 23.58 12.45 36.20 4.41
6202 6619 1.450848 CCAGTGATCACGGCAGCAT 60.451 57.895 19.85 0.00 36.20 3.79
6203 6620 1.712018 CCAGTGATCACGGCAGCATG 61.712 60.000 19.85 10.64 36.07 4.06
6220 6637 3.146618 CATGCCTTCAGCTTGCTTTAG 57.853 47.619 0.00 0.00 44.23 1.85
6221 6638 2.276732 TGCCTTCAGCTTGCTTTAGT 57.723 45.000 0.00 0.00 44.23 2.24
6222 6639 1.881973 TGCCTTCAGCTTGCTTTAGTG 59.118 47.619 0.00 0.00 44.23 2.74
6223 6640 1.882623 GCCTTCAGCTTGCTTTAGTGT 59.117 47.619 0.00 0.00 38.99 3.55
6224 6641 2.294512 GCCTTCAGCTTGCTTTAGTGTT 59.705 45.455 0.00 0.00 38.99 3.32
6225 6642 3.243535 GCCTTCAGCTTGCTTTAGTGTTT 60.244 43.478 0.00 0.00 38.99 2.83
6226 6643 4.293415 CCTTCAGCTTGCTTTAGTGTTTG 58.707 43.478 0.00 0.00 0.00 2.93
6227 6644 4.202050 CCTTCAGCTTGCTTTAGTGTTTGT 60.202 41.667 0.00 0.00 0.00 2.83
6228 6645 5.008613 CCTTCAGCTTGCTTTAGTGTTTGTA 59.991 40.000 0.00 0.00 0.00 2.41
6229 6646 6.443934 TTCAGCTTGCTTTAGTGTTTGTAA 57.556 33.333 0.00 0.00 0.00 2.41
6230 6647 6.633500 TCAGCTTGCTTTAGTGTTTGTAAT 57.367 33.333 0.00 0.00 0.00 1.89
6231 6648 6.668323 TCAGCTTGCTTTAGTGTTTGTAATC 58.332 36.000 0.00 0.00 0.00 1.75
6232 6649 6.262049 TCAGCTTGCTTTAGTGTTTGTAATCA 59.738 34.615 0.00 0.00 0.00 2.57
6233 6650 7.040478 TCAGCTTGCTTTAGTGTTTGTAATCAT 60.040 33.333 0.00 0.00 0.00 2.45
6234 6651 7.596248 CAGCTTGCTTTAGTGTTTGTAATCATT 59.404 33.333 0.00 0.00 0.00 2.57
6235 6652 8.143835 AGCTTGCTTTAGTGTTTGTAATCATTT 58.856 29.630 0.00 0.00 0.00 2.32
6236 6653 8.427774 GCTTGCTTTAGTGTTTGTAATCATTTC 58.572 33.333 0.00 0.00 0.00 2.17
6237 6654 9.683069 CTTGCTTTAGTGTTTGTAATCATTTCT 57.317 29.630 0.00 0.00 0.00 2.52
6239 6656 9.462174 TGCTTTAGTGTTTGTAATCATTTCTTG 57.538 29.630 0.00 0.00 0.00 3.02
6240 6657 9.677567 GCTTTAGTGTTTGTAATCATTTCTTGA 57.322 29.630 0.00 0.00 39.12 3.02
6244 6661 8.181904 AGTGTTTGTAATCATTTCTTGATGGT 57.818 30.769 0.00 0.00 44.51 3.55
6245 6662 8.299570 AGTGTTTGTAATCATTTCTTGATGGTC 58.700 33.333 0.00 0.00 44.51 4.02
6246 6663 8.299570 GTGTTTGTAATCATTTCTTGATGGTCT 58.700 33.333 0.00 0.00 44.51 3.85
6247 6664 9.513906 TGTTTGTAATCATTTCTTGATGGTCTA 57.486 29.630 0.00 0.00 44.51 2.59
6250 6667 9.904198 TTGTAATCATTTCTTGATGGTCTATGA 57.096 29.630 0.00 0.00 44.51 2.15
6251 6668 9.904198 TGTAATCATTTCTTGATGGTCTATGAA 57.096 29.630 0.00 0.00 44.51 2.57
6253 6670 7.814264 ATCATTTCTTGATGGTCTATGAACC 57.186 36.000 0.00 0.00 43.60 3.62
6254 6671 6.962182 TCATTTCTTGATGGTCTATGAACCT 58.038 36.000 0.68 0.00 40.20 3.50
6255 6672 8.089625 TCATTTCTTGATGGTCTATGAACCTA 57.910 34.615 0.68 0.00 40.20 3.08
6256 6673 8.548025 TCATTTCTTGATGGTCTATGAACCTAA 58.452 33.333 0.68 0.00 40.20 2.69
6257 6674 9.177608 CATTTCTTGATGGTCTATGAACCTAAA 57.822 33.333 0.68 0.00 40.20 1.85
6258 6675 9.927081 ATTTCTTGATGGTCTATGAACCTAAAT 57.073 29.630 0.68 0.00 40.20 1.40
6259 6676 8.737168 TTCTTGATGGTCTATGAACCTAAATG 57.263 34.615 0.68 0.00 40.20 2.32
6260 6677 7.861629 TCTTGATGGTCTATGAACCTAAATGT 58.138 34.615 0.68 0.00 40.20 2.71
6261 6678 7.987458 TCTTGATGGTCTATGAACCTAAATGTC 59.013 37.037 0.68 0.00 40.20 3.06
6262 6679 7.194112 TGATGGTCTATGAACCTAAATGTCA 57.806 36.000 0.68 0.00 40.20 3.58
6263 6680 7.805163 TGATGGTCTATGAACCTAAATGTCAT 58.195 34.615 0.68 0.00 40.20 3.06
6264 6681 8.274322 TGATGGTCTATGAACCTAAATGTCATT 58.726 33.333 0.00 0.00 40.20 2.57
6265 6682 9.125026 GATGGTCTATGAACCTAAATGTCATTT 57.875 33.333 14.98 14.98 40.20 2.32
6266 6683 8.877864 TGGTCTATGAACCTAAATGTCATTTT 57.122 30.769 15.77 0.00 40.20 1.82
6267 6684 9.308000 TGGTCTATGAACCTAAATGTCATTTTT 57.692 29.630 15.77 4.92 40.20 1.94
6277 6694 9.965824 ACCTAAATGTCATTTTTACTTCTTGTG 57.034 29.630 15.77 0.00 33.82 3.33
6278 6695 9.965824 CCTAAATGTCATTTTTACTTCTTGTGT 57.034 29.630 15.77 0.00 33.82 3.72
6294 6711 9.826574 ACTTCTTGTGTTATTTGTACTGTTAGA 57.173 29.630 0.00 0.00 0.00 2.10
6296 6713 9.602568 TTCTTGTGTTATTTGTACTGTTAGACA 57.397 29.630 0.00 0.00 0.00 3.41
6297 6714 9.772973 TCTTGTGTTATTTGTACTGTTAGACAT 57.227 29.630 0.00 0.00 0.00 3.06
6299 6716 8.234887 TGTGTTATTTGTACTGTTAGACATCG 57.765 34.615 0.00 0.00 0.00 3.84
6300 6717 7.329962 TGTGTTATTTGTACTGTTAGACATCGG 59.670 37.037 0.00 0.00 0.00 4.18
6301 6718 6.814644 TGTTATTTGTACTGTTAGACATCGGG 59.185 38.462 0.00 0.00 0.00 5.14
6302 6719 2.953466 TGTACTGTTAGACATCGGGC 57.047 50.000 0.00 0.00 0.00 6.13
6303 6720 1.479323 TGTACTGTTAGACATCGGGCC 59.521 52.381 0.00 0.00 0.00 5.80
6304 6721 0.742505 TACTGTTAGACATCGGGCCG 59.257 55.000 22.51 22.51 0.00 6.13
6305 6722 1.883084 CTGTTAGACATCGGGCCGC 60.883 63.158 23.83 7.19 0.00 6.53
6306 6723 2.588034 GTTAGACATCGGGCCGCC 60.588 66.667 23.83 10.17 0.00 6.13
6307 6724 3.857038 TTAGACATCGGGCCGCCC 61.857 66.667 23.83 19.64 41.09 6.13
6319 6736 4.308458 CCGCCCCAGACGTGTTCA 62.308 66.667 0.00 0.00 0.00 3.18
6320 6737 2.280524 CGCCCCAGACGTGTTCAA 60.281 61.111 0.00 0.00 0.00 2.69
6321 6738 1.890041 CGCCCCAGACGTGTTCAAA 60.890 57.895 0.00 0.00 0.00 2.69
6322 6739 1.440938 CGCCCCAGACGTGTTCAAAA 61.441 55.000 0.00 0.00 0.00 2.44
6323 6740 0.741915 GCCCCAGACGTGTTCAAAAA 59.258 50.000 0.00 0.00 0.00 1.94
6349 6766 9.956640 AAGGCAAAAATATATCAAATTTGGACA 57.043 25.926 17.90 4.28 32.91 4.02
6350 6767 9.956640 AGGCAAAAATATATCAAATTTGGACAA 57.043 25.926 17.90 0.00 32.91 3.18
6357 6774 9.801873 AATATATCAAATTTGGACAAAGTTCGG 57.198 29.630 17.90 0.00 36.60 4.30
6358 6775 3.712187 TCAAATTTGGACAAAGTTCGGC 58.288 40.909 17.90 0.00 36.60 5.54
6359 6776 2.415697 AATTTGGACAAAGTTCGGCG 57.584 45.000 0.00 0.00 33.32 6.46
6360 6777 1.600023 ATTTGGACAAAGTTCGGCGA 58.400 45.000 4.99 4.99 33.32 5.54
6361 6778 1.380524 TTTGGACAAAGTTCGGCGAA 58.619 45.000 19.83 19.83 0.00 4.70
6362 6779 0.941542 TTGGACAAAGTTCGGCGAAG 59.058 50.000 24.41 13.77 0.00 3.79
6363 6780 0.179067 TGGACAAAGTTCGGCGAAGT 60.179 50.000 24.41 23.86 0.00 3.01
6364 6781 0.942252 GGACAAAGTTCGGCGAAGTT 59.058 50.000 31.04 31.04 36.85 2.66
6365 6782 1.070108 GGACAAAGTTCGGCGAAGTTC 60.070 52.381 34.76 25.03 34.57 3.01
6366 6783 0.580104 ACAAAGTTCGGCGAAGTTCG 59.420 50.000 34.76 28.83 43.89 3.95
6367 6784 0.110823 CAAAGTTCGGCGAAGTTCGG 60.111 55.000 34.76 26.83 40.84 4.30
6440 6857 4.616181 AAAAGAAACTGACTGAACACGG 57.384 40.909 0.00 0.00 0.00 4.94
6441 6858 3.536956 AAGAAACTGACTGAACACGGA 57.463 42.857 0.00 0.00 0.00 4.69
6442 6859 3.099267 AGAAACTGACTGAACACGGAG 57.901 47.619 0.00 0.00 0.00 4.63
6444 6861 3.635373 AGAAACTGACTGAACACGGAGTA 59.365 43.478 0.00 0.00 41.61 2.59
6445 6862 3.644884 AACTGACTGAACACGGAGTAG 57.355 47.619 0.00 0.00 41.61 2.57
6446 6863 2.584236 ACTGACTGAACACGGAGTAGT 58.416 47.619 0.00 0.00 41.61 2.73
6447 6864 2.553172 ACTGACTGAACACGGAGTAGTC 59.447 50.000 0.00 0.00 41.61 2.59
6448 6865 1.534163 TGACTGAACACGGAGTAGTCG 59.466 52.381 0.00 0.00 41.61 4.18
6449 6866 0.240411 ACTGAACACGGAGTAGTCGC 59.760 55.000 0.00 0.00 41.61 5.19
6450 6867 0.456312 CTGAACACGGAGTAGTCGCC 60.456 60.000 0.00 0.00 41.61 5.54
6456 6873 2.402787 GGAGTAGTCGCCGTCGTC 59.597 66.667 0.00 0.00 36.96 4.20
6457 6874 2.021106 GAGTAGTCGCCGTCGTCG 59.979 66.667 0.00 0.00 36.96 5.12
6458 6875 4.157958 AGTAGTCGCCGTCGTCGC 62.158 66.667 0.00 0.00 36.96 5.19
6478 6895 2.107141 CCATCGTCGGGCTTCTCC 59.893 66.667 0.00 0.00 0.00 3.71
6479 6896 2.427245 CCATCGTCGGGCTTCTCCT 61.427 63.158 0.00 0.00 34.39 3.69
6480 6897 1.066587 CATCGTCGGGCTTCTCCTC 59.933 63.158 0.00 0.00 34.39 3.71
6481 6898 2.128507 ATCGTCGGGCTTCTCCTCC 61.129 63.158 0.00 0.00 34.39 4.30
6482 6899 2.575455 ATCGTCGGGCTTCTCCTCCT 62.575 60.000 0.00 0.00 34.39 3.69
6483 6900 2.352032 CGTCGGGCTTCTCCTCCTT 61.352 63.158 0.00 0.00 34.39 3.36
6484 6901 1.219393 GTCGGGCTTCTCCTCCTTG 59.781 63.158 0.00 0.00 34.39 3.61
6485 6902 1.078528 TCGGGCTTCTCCTCCTTGA 59.921 57.895 0.00 0.00 34.39 3.02
6486 6903 1.219393 CGGGCTTCTCCTCCTTGAC 59.781 63.158 0.00 0.00 34.39 3.18
6487 6904 1.219393 GGGCTTCTCCTCCTTGACG 59.781 63.158 0.00 0.00 34.39 4.35
6488 6905 1.448717 GGCTTCTCCTCCTTGACGC 60.449 63.158 0.00 0.00 0.00 5.19
6489 6906 1.807573 GCTTCTCCTCCTTGACGCG 60.808 63.158 3.53 3.53 0.00 6.01
6490 6907 1.153745 CTTCTCCTCCTTGACGCGG 60.154 63.158 12.47 0.00 0.00 6.46
6491 6908 3.296709 TTCTCCTCCTTGACGCGGC 62.297 63.158 12.47 8.67 0.00 6.53
6492 6909 4.821589 CTCCTCCTTGACGCGGCC 62.822 72.222 10.82 0.56 0.00 6.13
6511 6928 2.624114 TCCTTGGTGGACCCCTGA 59.376 61.111 0.00 0.00 40.56 3.86
6512 6929 1.846124 TCCTTGGTGGACCCCTGAC 60.846 63.158 0.00 0.00 40.56 3.51
6513 6930 2.757077 CTTGGTGGACCCCTGACC 59.243 66.667 0.00 0.00 34.29 4.02
6514 6931 3.246112 TTGGTGGACCCCTGACCG 61.246 66.667 0.00 0.00 34.29 4.79
6533 6950 3.403057 CGTCGCCAACGTGGACTG 61.403 66.667 8.04 0.00 46.42 3.51
6534 6951 3.041940 GTCGCCAACGTGGACTGG 61.042 66.667 8.04 4.03 40.96 4.00
6535 6952 3.542676 TCGCCAACGTGGACTGGT 61.543 61.111 5.91 0.00 40.96 4.00
6536 6953 3.345808 CGCCAACGTGGACTGGTG 61.346 66.667 5.91 4.63 40.96 4.17
6537 6954 2.978010 GCCAACGTGGACTGGTGG 60.978 66.667 5.91 0.96 40.96 4.61
6538 6955 2.978010 CCAACGTGGACTGGTGGC 60.978 66.667 0.00 0.00 40.96 5.01
6539 6956 3.345808 CAACGTGGACTGGTGGCG 61.346 66.667 0.00 0.00 0.00 5.69
6540 6957 4.619227 AACGTGGACTGGTGGCGG 62.619 66.667 0.00 0.00 0.00 6.13
6543 6960 4.947147 GTGGACTGGTGGCGGCAA 62.947 66.667 15.50 0.00 0.00 4.52
6544 6961 3.965258 TGGACTGGTGGCGGCAAT 61.965 61.111 15.50 0.00 0.00 3.56
6545 6962 3.443045 GGACTGGTGGCGGCAATG 61.443 66.667 15.50 9.46 0.00 2.82
6546 6963 4.120331 GACTGGTGGCGGCAATGC 62.120 66.667 15.50 0.22 0.00 3.56
6554 6971 4.383602 GCGGCAATGCGTCGTTGT 62.384 61.111 0.00 0.00 33.39 3.32
6555 6972 2.202171 CGGCAATGCGTCGTTGTC 60.202 61.111 0.00 9.09 33.39 3.18
6556 6973 2.942879 GGCAATGCGTCGTTGTCA 59.057 55.556 0.00 0.00 35.36 3.58
6557 6974 1.501741 GGCAATGCGTCGTTGTCAT 59.498 52.632 0.00 0.00 35.36 3.06
6558 6975 0.521242 GGCAATGCGTCGTTGTCATC 60.521 55.000 0.00 0.00 35.36 2.92
6559 6976 0.853224 GCAATGCGTCGTTGTCATCG 60.853 55.000 11.59 0.00 33.39 3.84
6562 6979 2.391821 GCGTCGTTGTCATCGCTG 59.608 61.111 0.00 0.00 44.28 5.18
6563 6980 2.372690 GCGTCGTTGTCATCGCTGT 61.373 57.895 0.00 0.00 44.28 4.40
6564 6981 1.696644 CGTCGTTGTCATCGCTGTC 59.303 57.895 0.00 0.00 0.00 3.51
6565 6982 1.674611 CGTCGTTGTCATCGCTGTCC 61.675 60.000 0.00 0.00 0.00 4.02
6566 6983 0.388649 GTCGTTGTCATCGCTGTCCT 60.389 55.000 0.00 0.00 0.00 3.85
6567 6984 0.109272 TCGTTGTCATCGCTGTCCTC 60.109 55.000 0.00 0.00 0.00 3.71
6568 6985 1.406219 CGTTGTCATCGCTGTCCTCG 61.406 60.000 0.00 0.00 0.00 4.63
6569 6986 0.109272 GTTGTCATCGCTGTCCTCGA 60.109 55.000 0.00 0.00 40.45 4.04
6570 6987 0.817654 TTGTCATCGCTGTCCTCGAT 59.182 50.000 0.00 0.00 46.27 3.59
6574 6991 1.356979 ATCGCTGTCCTCGATGACG 59.643 57.895 14.87 10.98 44.00 4.35
6575 6992 1.095807 ATCGCTGTCCTCGATGACGA 61.096 55.000 14.87 9.70 44.00 4.20
6583 7000 3.509659 TCGATGACGATGACGCCT 58.490 55.556 0.00 0.00 43.81 5.52
6584 7001 1.355563 TCGATGACGATGACGCCTC 59.644 57.895 0.00 0.00 43.81 4.70
6585 7002 1.658717 CGATGACGATGACGCCTCC 60.659 63.158 0.00 0.00 43.96 4.30
6586 7003 1.736586 GATGACGATGACGCCTCCT 59.263 57.895 0.00 0.00 43.96 3.69
6587 7004 0.103208 GATGACGATGACGCCTCCTT 59.897 55.000 0.00 0.00 43.96 3.36
6588 7005 0.103208 ATGACGATGACGCCTCCTTC 59.897 55.000 0.00 0.00 43.96 3.46
6589 7006 1.586564 GACGATGACGCCTCCTTCG 60.587 63.158 0.00 0.00 43.96 3.79
6590 7007 2.267681 GACGATGACGCCTCCTTCGT 62.268 60.000 9.42 9.42 43.75 3.85
6624 7041 2.398429 CTGCACGAATCGCTGCAG 59.602 61.111 29.78 29.78 46.09 4.41
6625 7042 3.092192 CTGCACGAATCGCTGCAGG 62.092 63.158 32.19 21.76 46.71 4.85
6626 7043 3.869272 GCACGAATCGCTGCAGGG 61.869 66.667 23.98 23.98 35.35 4.45
6627 7044 3.869272 CACGAATCGCTGCAGGGC 61.869 66.667 25.01 10.97 0.00 5.19
6655 7072 3.102097 CGCTCCCTCGCCATTTTC 58.898 61.111 0.00 0.00 0.00 2.29
6656 7073 1.745115 CGCTCCCTCGCCATTTTCA 60.745 57.895 0.00 0.00 0.00 2.69
6657 7074 1.709147 CGCTCCCTCGCCATTTTCAG 61.709 60.000 0.00 0.00 0.00 3.02
6658 7075 1.379642 GCTCCCTCGCCATTTTCAGG 61.380 60.000 0.00 0.00 0.00 3.86
6659 7076 0.749454 CTCCCTCGCCATTTTCAGGG 60.749 60.000 0.00 0.00 46.50 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 69 2.536997 GATTAGGCAGCCGGTGGTGT 62.537 60.000 5.55 0.00 42.04 4.16
188 197 4.821589 GAGTGGGGAGAAGCGGCG 62.822 72.222 0.51 0.51 0.00 6.46
198 207 0.692419 ATGTGAGCTAGGGAGTGGGG 60.692 60.000 0.00 0.00 0.00 4.96
283 292 3.721706 GTGGGTCAGGGGCTCAGG 61.722 72.222 0.00 0.00 0.00 3.86
284 293 3.721706 GGTGGGTCAGGGGCTCAG 61.722 72.222 0.00 0.00 0.00 3.35
285 294 4.590553 TGGTGGGTCAGGGGCTCA 62.591 66.667 0.00 0.00 0.00 4.26
286 295 2.558380 GATTGGTGGGTCAGGGGCTC 62.558 65.000 0.00 0.00 0.00 4.70
287 296 2.535317 ATTGGTGGGTCAGGGGCT 60.535 61.111 0.00 0.00 0.00 5.19
288 297 2.043953 GATTGGTGGGTCAGGGGC 60.044 66.667 0.00 0.00 0.00 5.80
289 298 2.683475 GGATTGGTGGGTCAGGGG 59.317 66.667 0.00 0.00 0.00 4.79
290 299 1.799157 TTGGGATTGGTGGGTCAGGG 61.799 60.000 0.00 0.00 0.00 4.45
293 302 1.462928 GGTTGGGATTGGTGGGTCA 59.537 57.895 0.00 0.00 0.00 4.02
466 476 0.813210 GAGCGGAAATCCTGGAGCTG 60.813 60.000 11.61 5.48 34.85 4.24
540 550 1.303309 CGGAAGAATTAGGCAGGCTG 58.697 55.000 10.94 10.94 0.00 4.85
553 563 5.367945 AAATAAATCTACAGGGCGGAAGA 57.632 39.130 0.00 0.00 0.00 2.87
663 673 5.625311 GGAACTAACTGAAGCAACATTTTCG 59.375 40.000 0.00 0.00 0.00 3.46
754 766 5.106197 TGCAGTACTTTTCGAGATAACGGTA 60.106 40.000 0.00 0.00 0.00 4.02
811 823 3.181496 GCGCTCAGGGAAAAATCTTAAGG 60.181 47.826 0.00 0.00 0.00 2.69
822 834 0.319083 TTAAAGACGCGCTCAGGGAA 59.681 50.000 5.73 0.00 36.53 3.97
824 836 1.369625 AATTAAAGACGCGCTCAGGG 58.630 50.000 5.73 0.00 38.93 4.45
825 837 2.159627 ACAAATTAAAGACGCGCTCAGG 59.840 45.455 5.73 0.00 0.00 3.86
909 927 3.186409 CGGTATGCATCTTTACAATCGGG 59.814 47.826 0.19 0.00 0.00 5.14
935 953 3.662078 TCCAGAGGTCATGAATGAGGAT 58.338 45.455 0.00 0.00 37.51 3.24
958 976 4.375272 CATACAAGGGTGACTAGAGCATG 58.625 47.826 0.00 0.00 0.00 4.06
1007 1025 4.023291 ACTGGGCTGTTTTCTGAGAAAAA 58.977 39.130 20.71 10.96 0.00 1.94
1065 1083 2.763627 TTAGCGCTCTTGCTGCACGA 62.764 55.000 16.34 11.21 46.70 4.35
1295 1313 2.094803 AGATCACTCTCTTGCTGTGACG 60.095 50.000 0.00 0.00 42.43 4.35
1331 1349 9.668497 AGGAAGTTAATATACAGAGTGGTTTTC 57.332 33.333 0.00 0.00 0.00 2.29
1369 1387 9.319143 GCAAATGACAGAGTTAATATACAGAGT 57.681 33.333 0.00 0.00 0.00 3.24
1370 1388 9.539825 AGCAAATGACAGAGTTAATATACAGAG 57.460 33.333 0.00 0.00 0.00 3.35
1371 1389 9.534565 GAGCAAATGACAGAGTTAATATACAGA 57.465 33.333 0.00 0.00 0.00 3.41
1372 1390 9.317936 TGAGCAAATGACAGAGTTAATATACAG 57.682 33.333 0.00 0.00 0.00 2.74
1373 1391 9.665719 TTGAGCAAATGACAGAGTTAATATACA 57.334 29.630 0.00 0.00 0.00 2.29
1374 1392 9.922305 GTTGAGCAAATGACAGAGTTAATATAC 57.078 33.333 0.00 0.00 0.00 1.47
1375 1393 9.890629 AGTTGAGCAAATGACAGAGTTAATATA 57.109 29.630 0.00 0.00 0.00 0.86
1376 1394 8.798859 AGTTGAGCAAATGACAGAGTTAATAT 57.201 30.769 0.00 0.00 0.00 1.28
1377 1395 8.621532 AAGTTGAGCAAATGACAGAGTTAATA 57.378 30.769 0.00 0.00 0.00 0.98
1378 1396 7.446625 AGAAGTTGAGCAAATGACAGAGTTAAT 59.553 33.333 0.00 0.00 0.00 1.40
1379 1397 6.767902 AGAAGTTGAGCAAATGACAGAGTTAA 59.232 34.615 0.00 0.00 0.00 2.01
1380 1398 6.291377 AGAAGTTGAGCAAATGACAGAGTTA 58.709 36.000 0.00 0.00 0.00 2.24
1381 1399 5.128919 AGAAGTTGAGCAAATGACAGAGTT 58.871 37.500 0.00 0.00 0.00 3.01
1382 1400 4.712476 AGAAGTTGAGCAAATGACAGAGT 58.288 39.130 0.00 0.00 0.00 3.24
1383 1401 5.686159 AAGAAGTTGAGCAAATGACAGAG 57.314 39.130 0.00 0.00 0.00 3.35
1384 1402 6.017109 GGTTAAGAAGTTGAGCAAATGACAGA 60.017 38.462 0.00 0.00 0.00 3.41
1543 1574 2.547826 GGCCCGACTAACTTGTGATAC 58.452 52.381 0.00 0.00 0.00 2.24
1667 1699 5.163088 ACCACCTTTATCAGAGACCAAGTTT 60.163 40.000 0.00 0.00 0.00 2.66
1699 1733 8.824756 AACTGTTCTCCTGTAGTGATCTAATA 57.175 34.615 0.00 0.00 0.00 0.98
1716 1750 5.063880 GGAGTGAACCATACAAACTGTTCT 58.936 41.667 0.00 0.00 38.29 3.01
1871 1934 0.963962 AGCTTGTGACCAAATGGCTG 59.036 50.000 0.00 0.00 39.32 4.85
1952 2027 3.252974 ACAGACGAAATAAGAGCCTGG 57.747 47.619 0.00 0.00 0.00 4.45
2028 2103 4.081406 CTCAACCAGATCACCAAATTCCA 58.919 43.478 0.00 0.00 0.00 3.53
2614 2796 4.878397 GTCAACATTCAGATGGGTAGAAGG 59.122 45.833 0.00 0.00 37.60 3.46
2818 3008 6.824196 TGGCATCAATGATTAAATGCACATTT 59.176 30.769 19.76 12.82 44.90 2.32
3090 3308 5.239525 CCATGGATATCTTTCTTCCCGAAAC 59.760 44.000 5.56 0.00 36.72 2.78
3319 3537 0.840617 TGTACACAGTCCCAAAGCCA 59.159 50.000 0.00 0.00 0.00 4.75
3633 3851 9.793252 AAAGCAAGCTAACATCAGTTTATATTG 57.207 29.630 0.00 0.00 39.15 1.90
3647 3865 4.379918 GGTCATTGAGGAAAGCAAGCTAAC 60.380 45.833 0.00 0.00 0.00 2.34
3754 3972 9.143631 CAAACATGTCTTAAATTCAGGATTTCC 57.856 33.333 0.00 0.00 38.80 3.13
3873 4271 5.073144 AGGGTCTTGTTTGATTGAGAAGGTA 59.927 40.000 0.00 0.00 0.00 3.08
4023 4423 6.747414 TGTATACAGAGGAAGTGGCATATT 57.253 37.500 0.08 0.00 0.00 1.28
4142 4542 9.657419 CTCCTGCAATTTTAAATTTCCTAACAT 57.343 29.630 0.00 0.00 0.00 2.71
4180 4580 5.941788 ACACAATATGGACCCCTAAATCTC 58.058 41.667 0.00 0.00 0.00 2.75
4190 4590 5.506708 ACCTTTCCTAACACAATATGGACC 58.493 41.667 0.00 0.00 0.00 4.46
4272 4672 8.070034 AGAGAATAGCTTGGAGATGATAGATG 57.930 38.462 0.00 0.00 0.00 2.90
4396 4796 2.035259 GCACGCCGTTTTAAAACAAGTG 60.035 45.455 27.85 27.85 38.81 3.16
4427 4827 8.159344 AGGACAAAAGAGAGAAAATGTTACTG 57.841 34.615 0.00 0.00 0.00 2.74
4463 4863 9.167311 GCTTACTCATAAATTTTGAAGAGAGGA 57.833 33.333 0.00 0.00 0.00 3.71
4642 5044 4.163078 AGACTATTCAGTATGCCTGCAAGT 59.837 41.667 0.00 0.00 41.25 3.16
4773 5175 4.883585 TCAAATGGACTAATGCTCATGGAC 59.116 41.667 0.00 0.00 0.00 4.02
4834 5238 4.424061 TTCTGCCAAGAACGATGAAATG 57.576 40.909 0.00 0.00 37.51 2.32
5032 5437 5.523588 TGAGATTCTTCATCCTCCAGTAGT 58.476 41.667 0.00 0.00 31.20 2.73
5123 5528 5.858049 TGCATTTTCGTTCTCATCATTTGAC 59.142 36.000 0.00 0.00 0.00 3.18
5155 5560 2.985809 CAAAGCGATGCATTTTCCGAAA 59.014 40.909 9.46 0.00 0.00 3.46
5167 5572 6.536731 AGCTCAGATTATTACAAAGCGATG 57.463 37.500 0.00 0.00 33.62 3.84
5205 5610 6.017605 CACTTTGCATATACTCTGGATGTTCC 60.018 42.308 0.00 0.00 36.96 3.62
5374 5779 2.030628 TGCATGAGTTGTGCACATGAAG 60.031 45.455 22.39 9.98 46.76 3.02
5450 5857 2.551938 GCTCTCTCCAGCCAAGAAGTTT 60.552 50.000 0.00 0.00 32.76 2.66
5636 6043 7.416890 CCCTACTCTGAATCGTAGAAATCACTT 60.417 40.741 4.62 0.00 43.58 3.16
5779 6186 7.176285 TGCATTTACAAAAATCTGCAAAGAC 57.824 32.000 0.00 0.00 37.55 3.01
5909 6321 5.710099 CCAGGCAAGTCTTCTTATTAAACCA 59.290 40.000 0.00 0.00 32.07 3.67
5910 6322 5.944007 TCCAGGCAAGTCTTCTTATTAAACC 59.056 40.000 0.00 0.00 32.07 3.27
5911 6323 6.879458 TCTCCAGGCAAGTCTTCTTATTAAAC 59.121 38.462 0.00 0.00 32.07 2.01
5921 6333 3.009916 ACATCAATCTCCAGGCAAGTCTT 59.990 43.478 0.00 0.00 0.00 3.01
5953 6365 6.220726 ACACAAAAGAACACCTAAAAGCAT 57.779 33.333 0.00 0.00 0.00 3.79
5980 6397 6.065374 TCCTAAGCATGACACAAAACCTAAA 58.935 36.000 0.00 0.00 0.00 1.85
5982 6399 5.235850 TCCTAAGCATGACACAAAACCTA 57.764 39.130 0.00 0.00 0.00 3.08
6000 6417 3.965347 CGGGGAGAACCTTAATCTTCCTA 59.035 47.826 2.54 0.00 41.64 2.94
6009 6426 0.756903 GCTATGCGGGGAGAACCTTA 59.243 55.000 0.00 0.00 40.03 2.69
6010 6427 1.527370 GCTATGCGGGGAGAACCTT 59.473 57.895 0.00 0.00 40.03 3.50
6011 6428 2.444256 GGCTATGCGGGGAGAACCT 61.444 63.158 0.00 0.00 40.03 3.50
6012 6429 2.111251 GGCTATGCGGGGAGAACC 59.889 66.667 0.00 0.00 39.11 3.62
6013 6430 2.111251 GGGCTATGCGGGGAGAAC 59.889 66.667 0.00 0.00 0.00 3.01
6014 6431 3.168528 GGGGCTATGCGGGGAGAA 61.169 66.667 0.00 0.00 0.00 2.87
6015 6432 4.172232 AGGGGCTATGCGGGGAGA 62.172 66.667 0.00 0.00 0.00 3.71
6016 6433 3.631046 GAGGGGCTATGCGGGGAG 61.631 72.222 0.00 0.00 0.00 4.30
6017 6434 4.172232 AGAGGGGCTATGCGGGGA 62.172 66.667 0.00 0.00 0.00 4.81
6018 6435 3.631046 GAGAGGGGCTATGCGGGG 61.631 72.222 0.00 0.00 0.00 5.73
6019 6436 2.143419 AAGAGAGGGGCTATGCGGG 61.143 63.158 0.00 0.00 0.00 6.13
6020 6437 1.070445 CAAGAGAGGGGCTATGCGG 59.930 63.158 0.00 0.00 0.00 5.69
6021 6438 1.070445 CCAAGAGAGGGGCTATGCG 59.930 63.158 0.00 0.00 0.00 4.73
6022 6439 0.179034 CACCAAGAGAGGGGCTATGC 60.179 60.000 0.00 0.00 0.00 3.14
6023 6440 0.471617 CCACCAAGAGAGGGGCTATG 59.528 60.000 0.00 0.00 0.00 2.23
6024 6441 0.695803 CCCACCAAGAGAGGGGCTAT 60.696 60.000 0.00 0.00 38.98 2.97
6025 6442 1.306997 CCCACCAAGAGAGGGGCTA 60.307 63.158 0.00 0.00 38.98 3.93
6026 6443 2.612115 CCCACCAAGAGAGGGGCT 60.612 66.667 0.00 0.00 38.98 5.19
6030 6447 1.302832 GTGCACCCACCAAGAGAGG 60.303 63.158 5.22 0.00 35.92 3.69
6031 6448 4.386413 GTGCACCCACCAAGAGAG 57.614 61.111 5.22 0.00 35.92 3.20
6039 6456 0.178068 ATGACGATAGGTGCACCCAC 59.822 55.000 32.29 21.09 41.32 4.61
6040 6457 0.464036 GATGACGATAGGTGCACCCA 59.536 55.000 32.29 20.79 43.77 4.51
6041 6458 0.464036 TGATGACGATAGGTGCACCC 59.536 55.000 32.29 16.21 43.77 4.61
6042 6459 1.409064 TCTGATGACGATAGGTGCACC 59.591 52.381 29.22 29.22 43.77 5.01
6043 6460 2.544694 CCTCTGATGACGATAGGTGCAC 60.545 54.545 8.80 8.80 43.77 4.57
6044 6461 1.683385 CCTCTGATGACGATAGGTGCA 59.317 52.381 0.00 0.00 43.77 4.57
6045 6462 1.000283 CCCTCTGATGACGATAGGTGC 60.000 57.143 0.00 0.00 43.77 5.01
6046 6463 2.035193 CACCCTCTGATGACGATAGGTG 59.965 54.545 0.00 0.00 43.77 4.00
6047 6464 2.311463 CACCCTCTGATGACGATAGGT 58.689 52.381 0.00 0.00 43.77 3.08
6048 6465 2.035193 CACACCCTCTGATGACGATAGG 59.965 54.545 0.00 0.00 43.77 2.57
6049 6466 2.690497 ACACACCCTCTGATGACGATAG 59.310 50.000 0.00 0.00 46.19 2.08
6050 6467 2.427095 CACACACCCTCTGATGACGATA 59.573 50.000 0.00 0.00 0.00 2.92
6051 6468 1.205655 CACACACCCTCTGATGACGAT 59.794 52.381 0.00 0.00 0.00 3.73
6052 6469 0.603065 CACACACCCTCTGATGACGA 59.397 55.000 0.00 0.00 0.00 4.20
6053 6470 0.390340 CCACACACCCTCTGATGACG 60.390 60.000 0.00 0.00 0.00 4.35
6054 6471 0.976641 TCCACACACCCTCTGATGAC 59.023 55.000 0.00 0.00 0.00 3.06
6055 6472 1.269958 CTCCACACACCCTCTGATGA 58.730 55.000 0.00 0.00 0.00 2.92
6056 6473 0.251354 CCTCCACACACCCTCTGATG 59.749 60.000 0.00 0.00 0.00 3.07
6057 6474 0.178891 ACCTCCACACACCCTCTGAT 60.179 55.000 0.00 0.00 0.00 2.90
6058 6475 0.399949 AACCTCCACACACCCTCTGA 60.400 55.000 0.00 0.00 0.00 3.27
6059 6476 0.250467 CAACCTCCACACACCCTCTG 60.250 60.000 0.00 0.00 0.00 3.35
6060 6477 1.418908 CCAACCTCCACACACCCTCT 61.419 60.000 0.00 0.00 0.00 3.69
6061 6478 1.073199 CCAACCTCCACACACCCTC 59.927 63.158 0.00 0.00 0.00 4.30
6062 6479 0.772124 ATCCAACCTCCACACACCCT 60.772 55.000 0.00 0.00 0.00 4.34
6063 6480 0.112412 AATCCAACCTCCACACACCC 59.888 55.000 0.00 0.00 0.00 4.61
6064 6481 1.202879 TGAATCCAACCTCCACACACC 60.203 52.381 0.00 0.00 0.00 4.16
6065 6482 2.154462 CTGAATCCAACCTCCACACAC 58.846 52.381 0.00 0.00 0.00 3.82
6066 6483 1.774254 ACTGAATCCAACCTCCACACA 59.226 47.619 0.00 0.00 0.00 3.72
6067 6484 2.224523 TGACTGAATCCAACCTCCACAC 60.225 50.000 0.00 0.00 0.00 3.82
6068 6485 2.038952 CTGACTGAATCCAACCTCCACA 59.961 50.000 0.00 0.00 0.00 4.17
6069 6486 2.704572 CTGACTGAATCCAACCTCCAC 58.295 52.381 0.00 0.00 0.00 4.02
6070 6487 1.003580 GCTGACTGAATCCAACCTCCA 59.996 52.381 0.00 0.00 0.00 3.86
6071 6488 1.280421 AGCTGACTGAATCCAACCTCC 59.720 52.381 0.00 0.00 0.00 4.30
6072 6489 2.777832 AGCTGACTGAATCCAACCTC 57.222 50.000 0.00 0.00 0.00 3.85
6073 6490 3.416156 GAAAGCTGACTGAATCCAACCT 58.584 45.455 0.00 0.00 0.00 3.50
6074 6491 2.160417 CGAAAGCTGACTGAATCCAACC 59.840 50.000 0.00 0.00 0.00 3.77
6075 6492 2.808543 ACGAAAGCTGACTGAATCCAAC 59.191 45.455 0.00 0.00 0.00 3.77
6076 6493 3.067106 GACGAAAGCTGACTGAATCCAA 58.933 45.455 0.00 0.00 0.00 3.53
6077 6494 2.300152 AGACGAAAGCTGACTGAATCCA 59.700 45.455 0.00 0.00 0.00 3.41
6078 6495 2.966050 AGACGAAAGCTGACTGAATCC 58.034 47.619 0.00 0.00 0.00 3.01
6079 6496 4.377841 CCAAAGACGAAAGCTGACTGAATC 60.378 45.833 0.00 0.00 0.00 2.52
6080 6497 3.499918 CCAAAGACGAAAGCTGACTGAAT 59.500 43.478 0.00 0.00 0.00 2.57
6081 6498 2.872245 CCAAAGACGAAAGCTGACTGAA 59.128 45.455 0.00 0.00 0.00 3.02
6082 6499 2.158957 ACCAAAGACGAAAGCTGACTGA 60.159 45.455 0.00 0.00 0.00 3.41
6083 6500 2.032549 CACCAAAGACGAAAGCTGACTG 60.033 50.000 0.00 0.00 0.00 3.51
6084 6501 2.213499 CACCAAAGACGAAAGCTGACT 58.787 47.619 0.00 0.00 0.00 3.41
6085 6502 1.264288 CCACCAAAGACGAAAGCTGAC 59.736 52.381 0.00 0.00 0.00 3.51
6086 6503 1.140052 TCCACCAAAGACGAAAGCTGA 59.860 47.619 0.00 0.00 0.00 4.26
6087 6504 1.593196 TCCACCAAAGACGAAAGCTG 58.407 50.000 0.00 0.00 0.00 4.24
6088 6505 2.568623 ATCCACCAAAGACGAAAGCT 57.431 45.000 0.00 0.00 0.00 3.74
6089 6506 3.243401 ACAAATCCACCAAAGACGAAAGC 60.243 43.478 0.00 0.00 0.00 3.51
6090 6507 4.568152 ACAAATCCACCAAAGACGAAAG 57.432 40.909 0.00 0.00 0.00 2.62
6091 6508 4.496673 CGAACAAATCCACCAAAGACGAAA 60.497 41.667 0.00 0.00 0.00 3.46
6092 6509 3.002862 CGAACAAATCCACCAAAGACGAA 59.997 43.478 0.00 0.00 0.00 3.85
6093 6510 2.546368 CGAACAAATCCACCAAAGACGA 59.454 45.455 0.00 0.00 0.00 4.20
6094 6511 2.289547 ACGAACAAATCCACCAAAGACG 59.710 45.455 0.00 0.00 0.00 4.18
6095 6512 3.564225 AGACGAACAAATCCACCAAAGAC 59.436 43.478 0.00 0.00 0.00 3.01
6096 6513 3.563808 CAGACGAACAAATCCACCAAAGA 59.436 43.478 0.00 0.00 0.00 2.52
6097 6514 3.315191 ACAGACGAACAAATCCACCAAAG 59.685 43.478 0.00 0.00 0.00 2.77
6098 6515 3.283751 ACAGACGAACAAATCCACCAAA 58.716 40.909 0.00 0.00 0.00 3.28
6099 6516 2.925724 ACAGACGAACAAATCCACCAA 58.074 42.857 0.00 0.00 0.00 3.67
6100 6517 2.631160 ACAGACGAACAAATCCACCA 57.369 45.000 0.00 0.00 0.00 4.17
6101 6518 3.982576 AAACAGACGAACAAATCCACC 57.017 42.857 0.00 0.00 0.00 4.61
6102 6519 5.912955 CCTAAAAACAGACGAACAAATCCAC 59.087 40.000 0.00 0.00 0.00 4.02
6103 6520 5.591067 ACCTAAAAACAGACGAACAAATCCA 59.409 36.000 0.00 0.00 0.00 3.41
6104 6521 6.068473 ACCTAAAAACAGACGAACAAATCC 57.932 37.500 0.00 0.00 0.00 3.01
6105 6522 7.190871 TCAACCTAAAAACAGACGAACAAATC 58.809 34.615 0.00 0.00 0.00 2.17
6106 6523 7.090953 TCAACCTAAAAACAGACGAACAAAT 57.909 32.000 0.00 0.00 0.00 2.32
6107 6524 6.497785 TCAACCTAAAAACAGACGAACAAA 57.502 33.333 0.00 0.00 0.00 2.83
6108 6525 6.497785 TTCAACCTAAAAACAGACGAACAA 57.502 33.333 0.00 0.00 0.00 2.83
6109 6526 6.238538 GGATTCAACCTAAAAACAGACGAACA 60.239 38.462 0.00 0.00 0.00 3.18
6110 6527 6.017357 AGGATTCAACCTAAAAACAGACGAAC 60.017 38.462 0.00 0.00 38.65 3.95
6111 6528 6.059484 AGGATTCAACCTAAAAACAGACGAA 58.941 36.000 0.00 0.00 38.65 3.85
6112 6529 5.617252 AGGATTCAACCTAAAAACAGACGA 58.383 37.500 0.00 0.00 38.65 4.20
6113 6530 5.941948 AGGATTCAACCTAAAAACAGACG 57.058 39.130 0.00 0.00 38.65 4.18
6130 6547 5.091261 AGAAAGCGTATGTCAGAAGGATT 57.909 39.130 0.00 0.00 0.00 3.01
6131 6548 4.744795 AGAAAGCGTATGTCAGAAGGAT 57.255 40.909 0.00 0.00 0.00 3.24
6132 6549 5.594725 AGATAGAAAGCGTATGTCAGAAGGA 59.405 40.000 0.00 0.00 0.00 3.36
6133 6550 5.689514 CAGATAGAAAGCGTATGTCAGAAGG 59.310 44.000 0.00 0.00 0.00 3.46
6134 6551 6.269315 ACAGATAGAAAGCGTATGTCAGAAG 58.731 40.000 0.00 0.00 0.00 2.85
6135 6552 6.095580 AGACAGATAGAAAGCGTATGTCAGAA 59.904 38.462 5.36 0.00 38.38 3.02
6136 6553 5.590663 AGACAGATAGAAAGCGTATGTCAGA 59.409 40.000 5.36 0.00 38.38 3.27
6137 6554 5.826586 AGACAGATAGAAAGCGTATGTCAG 58.173 41.667 5.36 0.00 38.38 3.51
6138 6555 5.836821 AGACAGATAGAAAGCGTATGTCA 57.163 39.130 5.36 0.00 38.38 3.58
6139 6556 9.332301 GTAATAGACAGATAGAAAGCGTATGTC 57.668 37.037 0.00 0.00 36.65 3.06
6140 6557 8.847196 TGTAATAGACAGATAGAAAGCGTATGT 58.153 33.333 0.00 0.00 32.86 2.29
6141 6558 9.678941 TTGTAATAGACAGATAGAAAGCGTATG 57.321 33.333 0.00 0.00 39.88 2.39
6142 6559 9.680315 GTTGTAATAGACAGATAGAAAGCGTAT 57.320 33.333 0.00 0.00 39.88 3.06
6143 6560 7.854422 CGTTGTAATAGACAGATAGAAAGCGTA 59.146 37.037 0.00 0.00 39.88 4.42
6144 6561 6.691818 CGTTGTAATAGACAGATAGAAAGCGT 59.308 38.462 0.00 0.00 39.88 5.07
6145 6562 6.691818 ACGTTGTAATAGACAGATAGAAAGCG 59.308 38.462 0.00 0.00 39.88 4.68
6146 6563 7.701078 TCACGTTGTAATAGACAGATAGAAAGC 59.299 37.037 0.00 0.00 39.88 3.51
6147 6564 9.737427 ATCACGTTGTAATAGACAGATAGAAAG 57.263 33.333 0.00 0.00 39.88 2.62
6150 6567 9.516314 CAAATCACGTTGTAATAGACAGATAGA 57.484 33.333 0.00 0.00 39.88 1.98
6151 6568 8.269424 GCAAATCACGTTGTAATAGACAGATAG 58.731 37.037 0.00 0.00 39.88 2.08
6152 6569 7.979537 AGCAAATCACGTTGTAATAGACAGATA 59.020 33.333 0.00 0.00 39.88 1.98
6153 6570 6.818644 AGCAAATCACGTTGTAATAGACAGAT 59.181 34.615 0.00 0.00 39.88 2.90
6154 6571 6.163476 AGCAAATCACGTTGTAATAGACAGA 58.837 36.000 0.00 0.00 39.88 3.41
6155 6572 6.408858 AGCAAATCACGTTGTAATAGACAG 57.591 37.500 0.00 0.00 39.88 3.51
6156 6573 6.425417 TCAAGCAAATCACGTTGTAATAGACA 59.575 34.615 0.00 0.00 35.78 3.41
6157 6574 6.827641 TCAAGCAAATCACGTTGTAATAGAC 58.172 36.000 0.00 0.00 0.00 2.59
6158 6575 7.428282 TTCAAGCAAATCACGTTGTAATAGA 57.572 32.000 0.00 0.00 0.00 1.98
6159 6576 7.429340 GGATTCAAGCAAATCACGTTGTAATAG 59.571 37.037 8.25 0.00 37.38 1.73
6160 6577 7.094592 TGGATTCAAGCAAATCACGTTGTAATA 60.095 33.333 8.25 0.00 37.38 0.98
6161 6578 6.092748 GGATTCAAGCAAATCACGTTGTAAT 58.907 36.000 8.25 0.00 37.38 1.89
6162 6579 5.009110 TGGATTCAAGCAAATCACGTTGTAA 59.991 36.000 8.25 0.00 37.38 2.41
6163 6580 4.517075 TGGATTCAAGCAAATCACGTTGTA 59.483 37.500 8.25 0.00 37.38 2.41
6164 6581 3.317711 TGGATTCAAGCAAATCACGTTGT 59.682 39.130 8.25 0.00 37.38 3.32
6165 6582 3.899734 TGGATTCAAGCAAATCACGTTG 58.100 40.909 8.25 0.00 37.38 4.10
6166 6583 3.569701 ACTGGATTCAAGCAAATCACGTT 59.430 39.130 8.25 0.00 37.38 3.99
6167 6584 3.058016 CACTGGATTCAAGCAAATCACGT 60.058 43.478 8.25 0.00 37.38 4.49
6168 6585 3.189080 TCACTGGATTCAAGCAAATCACG 59.811 43.478 8.25 0.00 37.38 4.35
6169 6586 4.771590 TCACTGGATTCAAGCAAATCAC 57.228 40.909 8.25 0.91 37.38 3.06
6170 6587 5.011586 TGATCACTGGATTCAAGCAAATCA 58.988 37.500 0.00 0.00 37.38 2.57
6171 6588 5.338365 GTGATCACTGGATTCAAGCAAATC 58.662 41.667 18.83 0.00 32.67 2.17
6172 6589 4.142534 CGTGATCACTGGATTCAAGCAAAT 60.143 41.667 22.95 0.00 32.67 2.32
6173 6590 3.189080 CGTGATCACTGGATTCAAGCAAA 59.811 43.478 22.95 0.00 32.67 3.68
6174 6591 2.743664 CGTGATCACTGGATTCAAGCAA 59.256 45.455 22.95 0.00 32.67 3.91
6175 6592 2.349590 CGTGATCACTGGATTCAAGCA 58.650 47.619 22.95 0.00 32.67 3.91
6176 6593 1.667724 CCGTGATCACTGGATTCAAGC 59.332 52.381 23.87 0.00 32.67 4.01
6177 6594 1.667724 GCCGTGATCACTGGATTCAAG 59.332 52.381 29.10 11.34 32.67 3.02
6178 6595 1.003003 TGCCGTGATCACTGGATTCAA 59.997 47.619 29.10 13.00 32.67 2.69
6179 6596 0.612744 TGCCGTGATCACTGGATTCA 59.387 50.000 29.10 19.11 32.67 2.57
6180 6597 1.293924 CTGCCGTGATCACTGGATTC 58.706 55.000 29.10 17.42 32.67 2.52
6181 6598 0.745845 GCTGCCGTGATCACTGGATT 60.746 55.000 29.10 0.00 32.67 3.01
6182 6599 1.153289 GCTGCCGTGATCACTGGAT 60.153 57.895 29.10 0.00 36.13 3.41
6183 6600 1.902765 ATGCTGCCGTGATCACTGGA 61.903 55.000 29.10 21.41 0.00 3.86
6184 6601 1.450848 ATGCTGCCGTGATCACTGG 60.451 57.895 22.95 23.48 0.00 4.00
6185 6602 1.719709 CATGCTGCCGTGATCACTG 59.280 57.895 22.95 17.76 0.00 3.66
6186 6603 2.110967 GCATGCTGCCGTGATCACT 61.111 57.895 22.95 0.00 37.42 3.41
6187 6604 2.406401 GCATGCTGCCGTGATCAC 59.594 61.111 16.21 16.21 37.42 3.06
6196 6613 1.153823 CAAGCTGAAGGCATGCTGC 60.154 57.895 18.92 13.69 44.79 5.25
6200 6617 2.490903 ACTAAAGCAAGCTGAAGGCATG 59.509 45.455 0.00 0.00 44.79 4.06
6201 6618 2.490903 CACTAAAGCAAGCTGAAGGCAT 59.509 45.455 0.00 0.00 44.79 4.40
6202 6619 1.881973 CACTAAAGCAAGCTGAAGGCA 59.118 47.619 0.00 0.00 44.79 4.75
6203 6620 1.882623 ACACTAAAGCAAGCTGAAGGC 59.117 47.619 0.00 0.00 42.19 4.35
6204 6621 4.202050 ACAAACACTAAAGCAAGCTGAAGG 60.202 41.667 0.00 0.00 0.00 3.46
6205 6622 4.925068 ACAAACACTAAAGCAAGCTGAAG 58.075 39.130 0.00 0.00 0.00 3.02
6206 6623 4.981806 ACAAACACTAAAGCAAGCTGAA 57.018 36.364 0.00 0.00 0.00 3.02
6207 6624 6.262049 TGATTACAAACACTAAAGCAAGCTGA 59.738 34.615 0.00 0.00 0.00 4.26
6208 6625 6.437928 TGATTACAAACACTAAAGCAAGCTG 58.562 36.000 0.00 0.00 0.00 4.24
6209 6626 6.633500 TGATTACAAACACTAAAGCAAGCT 57.367 33.333 0.00 0.00 0.00 3.74
6210 6627 7.873739 AATGATTACAAACACTAAAGCAAGC 57.126 32.000 0.00 0.00 0.00 4.01
6211 6628 9.683069 AGAAATGATTACAAACACTAAAGCAAG 57.317 29.630 0.00 0.00 0.00 4.01
6213 6630 9.462174 CAAGAAATGATTACAAACACTAAAGCA 57.538 29.630 0.00 0.00 0.00 3.91
6214 6631 9.677567 TCAAGAAATGATTACAAACACTAAAGC 57.322 29.630 0.00 0.00 31.50 3.51
6218 6635 9.295825 ACCATCAAGAAATGATTACAAACACTA 57.704 29.630 0.00 0.00 46.85 2.74
6219 6636 8.181904 ACCATCAAGAAATGATTACAAACACT 57.818 30.769 0.00 0.00 46.85 3.55
6220 6637 8.299570 AGACCATCAAGAAATGATTACAAACAC 58.700 33.333 0.00 0.00 46.85 3.32
6221 6638 8.408043 AGACCATCAAGAAATGATTACAAACA 57.592 30.769 0.00 0.00 46.85 2.83
6224 6641 9.904198 TCATAGACCATCAAGAAATGATTACAA 57.096 29.630 0.00 0.00 46.85 2.41
6225 6642 9.904198 TTCATAGACCATCAAGAAATGATTACA 57.096 29.630 0.00 0.00 46.85 2.41
6227 6644 9.342308 GGTTCATAGACCATCAAGAAATGATTA 57.658 33.333 0.00 0.00 46.85 1.75
6228 6645 8.230472 GGTTCATAGACCATCAAGAAATGATT 57.770 34.615 0.00 0.00 46.85 2.57
6230 6647 6.962182 AGGTTCATAGACCATCAAGAAATGA 58.038 36.000 0.00 0.00 42.35 2.57
6231 6648 8.737168 TTAGGTTCATAGACCATCAAGAAATG 57.263 34.615 0.00 0.00 42.35 2.32
6232 6649 9.927081 ATTTAGGTTCATAGACCATCAAGAAAT 57.073 29.630 0.00 0.00 42.35 2.17
6233 6650 9.177608 CATTTAGGTTCATAGACCATCAAGAAA 57.822 33.333 0.00 0.00 42.35 2.52
6234 6651 8.328758 ACATTTAGGTTCATAGACCATCAAGAA 58.671 33.333 0.00 0.00 42.35 2.52
6235 6652 7.861629 ACATTTAGGTTCATAGACCATCAAGA 58.138 34.615 0.00 0.00 42.35 3.02
6236 6653 7.770433 TGACATTTAGGTTCATAGACCATCAAG 59.230 37.037 0.00 0.00 42.35 3.02
6237 6654 7.629157 TGACATTTAGGTTCATAGACCATCAA 58.371 34.615 0.00 0.00 42.35 2.57
6238 6655 7.194112 TGACATTTAGGTTCATAGACCATCA 57.806 36.000 0.00 0.00 42.35 3.07
6239 6656 8.682936 AATGACATTTAGGTTCATAGACCATC 57.317 34.615 0.00 0.00 42.35 3.51
6240 6657 9.479549 AAAATGACATTTAGGTTCATAGACCAT 57.520 29.630 13.69 0.00 42.35 3.55
6241 6658 8.877864 AAAATGACATTTAGGTTCATAGACCA 57.122 30.769 13.69 0.00 42.35 4.02
6251 6668 9.965824 CACAAGAAGTAAAAATGACATTTAGGT 57.034 29.630 13.69 5.57 0.00 3.08
6252 6669 9.965824 ACACAAGAAGTAAAAATGACATTTAGG 57.034 29.630 13.69 0.17 0.00 2.69
6268 6685 9.826574 TCTAACAGTACAAATAACACAAGAAGT 57.173 29.630 0.00 0.00 0.00 3.01
6270 6687 9.602568 TGTCTAACAGTACAAATAACACAAGAA 57.397 29.630 0.00 0.00 0.00 2.52
6271 6688 9.772973 ATGTCTAACAGTACAAATAACACAAGA 57.227 29.630 0.00 0.00 0.00 3.02
6273 6690 8.705134 CGATGTCTAACAGTACAAATAACACAA 58.295 33.333 0.00 0.00 0.00 3.33
6274 6691 7.329962 CCGATGTCTAACAGTACAAATAACACA 59.670 37.037 0.00 0.00 0.00 3.72
6275 6692 7.201496 CCCGATGTCTAACAGTACAAATAACAC 60.201 40.741 0.00 0.00 0.00 3.32
6276 6693 6.814644 CCCGATGTCTAACAGTACAAATAACA 59.185 38.462 0.00 0.00 0.00 2.41
6277 6694 6.238022 GCCCGATGTCTAACAGTACAAATAAC 60.238 42.308 0.00 0.00 0.00 1.89
6278 6695 5.813672 GCCCGATGTCTAACAGTACAAATAA 59.186 40.000 0.00 0.00 0.00 1.40
6279 6696 5.353938 GCCCGATGTCTAACAGTACAAATA 58.646 41.667 0.00 0.00 0.00 1.40
6280 6697 4.189231 GCCCGATGTCTAACAGTACAAAT 58.811 43.478 0.00 0.00 0.00 2.32
6281 6698 3.592059 GCCCGATGTCTAACAGTACAAA 58.408 45.455 0.00 0.00 0.00 2.83
6282 6699 2.093869 GGCCCGATGTCTAACAGTACAA 60.094 50.000 0.00 0.00 0.00 2.41
6283 6700 1.479323 GGCCCGATGTCTAACAGTACA 59.521 52.381 0.00 0.00 0.00 2.90
6284 6701 1.535437 CGGCCCGATGTCTAACAGTAC 60.535 57.143 0.00 0.00 0.00 2.73
6285 6702 0.742505 CGGCCCGATGTCTAACAGTA 59.257 55.000 0.00 0.00 0.00 2.74
6286 6703 1.515954 CGGCCCGATGTCTAACAGT 59.484 57.895 0.00 0.00 0.00 3.55
6287 6704 1.883084 GCGGCCCGATGTCTAACAG 60.883 63.158 7.68 0.00 0.00 3.16
6288 6705 2.185867 GCGGCCCGATGTCTAACA 59.814 61.111 7.68 0.00 0.00 2.41
6289 6706 2.588034 GGCGGCCCGATGTCTAAC 60.588 66.667 7.68 0.00 0.00 2.34
6290 6707 3.857038 GGGCGGCCCGATGTCTAA 61.857 66.667 24.63 0.00 32.13 2.10
6302 6719 3.818121 TTGAACACGTCTGGGGCGG 62.818 63.158 0.00 0.00 0.00 6.13
6303 6720 1.440938 TTTTGAACACGTCTGGGGCG 61.441 55.000 0.00 0.00 0.00 6.13
6304 6721 0.741915 TTTTTGAACACGTCTGGGGC 59.258 50.000 0.00 0.00 0.00 5.80
6323 6740 9.956640 TGTCCAAATTTGATATATTTTTGCCTT 57.043 25.926 19.86 0.00 0.00 4.35
6324 6741 9.956640 TTGTCCAAATTTGATATATTTTTGCCT 57.043 25.926 19.86 0.00 0.00 4.75
6331 6748 9.801873 CCGAACTTTGTCCAAATTTGATATATT 57.198 29.630 19.86 5.01 0.00 1.28
6332 6749 7.920682 GCCGAACTTTGTCCAAATTTGATATAT 59.079 33.333 19.86 0.00 0.00 0.86
6333 6750 7.254852 GCCGAACTTTGTCCAAATTTGATATA 58.745 34.615 19.86 3.06 0.00 0.86
6334 6751 6.099341 GCCGAACTTTGTCCAAATTTGATAT 58.901 36.000 19.86 0.00 0.00 1.63
6335 6752 5.465935 GCCGAACTTTGTCCAAATTTGATA 58.534 37.500 19.86 4.49 0.00 2.15
6336 6753 4.306600 GCCGAACTTTGTCCAAATTTGAT 58.693 39.130 19.86 0.00 0.00 2.57
6337 6754 3.712187 GCCGAACTTTGTCCAAATTTGA 58.288 40.909 19.86 3.14 0.00 2.69
6338 6755 2.470999 CGCCGAACTTTGTCCAAATTTG 59.529 45.455 11.40 11.40 0.00 2.32
6339 6756 2.359531 TCGCCGAACTTTGTCCAAATTT 59.640 40.909 0.00 0.00 0.00 1.82
6340 6757 1.950909 TCGCCGAACTTTGTCCAAATT 59.049 42.857 0.00 0.00 0.00 1.82
6341 6758 1.600023 TCGCCGAACTTTGTCCAAAT 58.400 45.000 0.00 0.00 0.00 2.32
6342 6759 1.332375 CTTCGCCGAACTTTGTCCAAA 59.668 47.619 0.00 0.00 0.00 3.28
6343 6760 0.941542 CTTCGCCGAACTTTGTCCAA 59.058 50.000 0.00 0.00 0.00 3.53
6344 6761 0.179067 ACTTCGCCGAACTTTGTCCA 60.179 50.000 0.00 0.00 0.00 4.02
6345 6762 0.942252 AACTTCGCCGAACTTTGTCC 59.058 50.000 0.00 0.00 0.00 4.02
6346 6763 1.396815 CGAACTTCGCCGAACTTTGTC 60.397 52.381 0.00 0.00 31.14 3.18
6347 6764 0.580104 CGAACTTCGCCGAACTTTGT 59.420 50.000 0.00 0.00 31.14 2.83
6348 6765 0.110823 CCGAACTTCGCCGAACTTTG 60.111 55.000 5.61 0.00 38.82 2.77
6349 6766 1.838568 GCCGAACTTCGCCGAACTTT 61.839 55.000 5.61 0.00 38.82 2.66
6350 6767 2.315386 GCCGAACTTCGCCGAACTT 61.315 57.895 5.61 0.00 38.82 2.66
6351 6768 2.737376 GCCGAACTTCGCCGAACT 60.737 61.111 5.61 0.00 38.82 3.01
6352 6769 1.079875 TATGCCGAACTTCGCCGAAC 61.080 55.000 5.61 0.00 38.82 3.95
6353 6770 0.179094 ATATGCCGAACTTCGCCGAA 60.179 50.000 5.61 0.00 38.82 4.30
6354 6771 0.669619 TATATGCCGAACTTCGCCGA 59.330 50.000 5.61 0.00 38.82 5.54
6355 6772 1.710013 ATATATGCCGAACTTCGCCG 58.290 50.000 5.61 0.00 38.82 6.46
6356 6773 8.583810 TTATATAATATATGCCGAACTTCGCC 57.416 34.615 5.61 0.00 38.82 5.54
6418 6835 4.698304 TCCGTGTTCAGTCAGTTTCTTTTT 59.302 37.500 0.00 0.00 0.00 1.94
6419 6836 4.258543 TCCGTGTTCAGTCAGTTTCTTTT 58.741 39.130 0.00 0.00 0.00 2.27
6420 6837 3.869065 TCCGTGTTCAGTCAGTTTCTTT 58.131 40.909 0.00 0.00 0.00 2.52
6421 6838 3.118738 ACTCCGTGTTCAGTCAGTTTCTT 60.119 43.478 0.00 0.00 0.00 2.52
6422 6839 2.431057 ACTCCGTGTTCAGTCAGTTTCT 59.569 45.455 0.00 0.00 0.00 2.52
6423 6840 2.822764 ACTCCGTGTTCAGTCAGTTTC 58.177 47.619 0.00 0.00 0.00 2.78
6424 6841 2.981859 ACTCCGTGTTCAGTCAGTTT 57.018 45.000 0.00 0.00 0.00 2.66
6425 6842 2.957006 ACTACTCCGTGTTCAGTCAGTT 59.043 45.455 0.00 0.00 0.00 3.16
6426 6843 2.553172 GACTACTCCGTGTTCAGTCAGT 59.447 50.000 0.00 0.00 35.44 3.41
6427 6844 2.412977 CGACTACTCCGTGTTCAGTCAG 60.413 54.545 0.00 0.00 35.20 3.51
6428 6845 1.534163 CGACTACTCCGTGTTCAGTCA 59.466 52.381 0.00 0.00 35.20 3.41
6429 6846 1.728502 GCGACTACTCCGTGTTCAGTC 60.729 57.143 0.00 0.00 33.25 3.51
6430 6847 0.240411 GCGACTACTCCGTGTTCAGT 59.760 55.000 0.00 0.00 0.00 3.41
6431 6848 0.456312 GGCGACTACTCCGTGTTCAG 60.456 60.000 0.00 0.00 0.00 3.02
6432 6849 1.582968 GGCGACTACTCCGTGTTCA 59.417 57.895 0.00 0.00 0.00 3.18
6433 6850 1.513586 CGGCGACTACTCCGTGTTC 60.514 63.158 0.00 0.00 39.23 3.18
6434 6851 2.564975 CGGCGACTACTCCGTGTT 59.435 61.111 0.00 0.00 39.23 3.32
6439 6856 2.402787 GACGACGGCGACTACTCC 59.597 66.667 22.49 0.00 41.64 3.85
6440 6857 2.021106 CGACGACGGCGACTACTC 59.979 66.667 22.49 1.83 41.64 2.59
6441 6858 4.157958 GCGACGACGGCGACTACT 62.158 66.667 30.26 0.00 41.64 2.57
6461 6878 2.107141 GGAGAAGCCCGACGATGG 59.893 66.667 0.00 0.00 0.00 3.51
6462 6879 1.066587 GAGGAGAAGCCCGACGATG 59.933 63.158 0.00 0.00 37.37 3.84
6463 6880 2.128507 GGAGGAGAAGCCCGACGAT 61.129 63.158 0.00 0.00 37.37 3.73
6464 6881 2.754658 GGAGGAGAAGCCCGACGA 60.755 66.667 0.00 0.00 37.37 4.20
6465 6882 2.352032 AAGGAGGAGAAGCCCGACG 61.352 63.158 0.00 0.00 37.37 5.12
6466 6883 1.219393 CAAGGAGGAGAAGCCCGAC 59.781 63.158 0.00 0.00 37.37 4.79
6467 6884 1.078528 TCAAGGAGGAGAAGCCCGA 59.921 57.895 0.00 0.00 37.37 5.14
6468 6885 1.219393 GTCAAGGAGGAGAAGCCCG 59.781 63.158 0.00 0.00 37.37 6.13
6469 6886 1.219393 CGTCAAGGAGGAGAAGCCC 59.781 63.158 0.00 0.00 37.37 5.19
6470 6887 1.448717 GCGTCAAGGAGGAGAAGCC 60.449 63.158 0.00 0.00 33.96 4.35
6471 6888 1.807573 CGCGTCAAGGAGGAGAAGC 60.808 63.158 0.00 0.00 36.19 3.86
6472 6889 1.153745 CCGCGTCAAGGAGGAGAAG 60.154 63.158 4.92 0.00 0.00 2.85
6473 6890 2.970639 CCGCGTCAAGGAGGAGAA 59.029 61.111 4.92 0.00 0.00 2.87
6474 6891 3.760035 GCCGCGTCAAGGAGGAGA 61.760 66.667 4.92 0.00 0.00 3.71
6475 6892 4.821589 GGCCGCGTCAAGGAGGAG 62.822 72.222 4.92 0.00 0.00 3.69
6494 6911 1.846124 GTCAGGGGTCCACCAAGGA 60.846 63.158 0.00 0.00 46.75 3.36
6495 6912 2.757077 GTCAGGGGTCCACCAAGG 59.243 66.667 0.00 0.00 42.91 3.61
6496 6913 2.757077 GGTCAGGGGTCCACCAAG 59.243 66.667 0.00 0.00 42.91 3.61
6497 6914 3.246112 CGGTCAGGGGTCCACCAA 61.246 66.667 0.00 0.00 42.91 3.67
6517 6934 3.041940 CCAGTCCACGTTGGCGAC 61.042 66.667 0.00 0.00 42.00 5.19
6518 6935 3.542676 ACCAGTCCACGTTGGCGA 61.543 61.111 3.87 0.00 42.00 5.54
6519 6936 3.345808 CACCAGTCCACGTTGGCG 61.346 66.667 3.87 0.00 44.93 5.69
6520 6937 2.978010 CCACCAGTCCACGTTGGC 60.978 66.667 3.87 0.00 37.47 4.52
6521 6938 2.978010 GCCACCAGTCCACGTTGG 60.978 66.667 2.39 2.39 39.43 3.77
6522 6939 3.345808 CGCCACCAGTCCACGTTG 61.346 66.667 0.00 0.00 0.00 4.10
6523 6940 4.619227 CCGCCACCAGTCCACGTT 62.619 66.667 0.00 0.00 0.00 3.99
6526 6943 4.947147 TTGCCGCCACCAGTCCAC 62.947 66.667 0.00 0.00 0.00 4.02
6527 6944 3.965258 ATTGCCGCCACCAGTCCA 61.965 61.111 0.00 0.00 0.00 4.02
6528 6945 3.443045 CATTGCCGCCACCAGTCC 61.443 66.667 0.00 0.00 0.00 3.85
6529 6946 4.120331 GCATTGCCGCCACCAGTC 62.120 66.667 0.00 0.00 0.00 3.51
6537 6954 4.383602 ACAACGACGCATTGCCGC 62.384 61.111 2.41 0.00 0.00 6.53
6538 6955 2.202171 GACAACGACGCATTGCCG 60.202 61.111 2.41 4.40 0.00 5.69
6539 6956 0.521242 GATGACAACGACGCATTGCC 60.521 55.000 2.41 0.00 0.00 4.52
6540 6957 0.853224 CGATGACAACGACGCATTGC 60.853 55.000 0.00 0.00 0.00 3.56
6541 6958 3.188026 CGATGACAACGACGCATTG 57.812 52.632 0.00 0.00 0.00 2.82
6546 6963 1.674611 GGACAGCGATGACAACGACG 61.675 60.000 8.12 0.00 0.00 5.12
6547 6964 0.388649 AGGACAGCGATGACAACGAC 60.389 55.000 8.12 0.67 0.00 4.34
6548 6965 0.109272 GAGGACAGCGATGACAACGA 60.109 55.000 8.12 0.00 0.00 3.85
6549 6966 1.406219 CGAGGACAGCGATGACAACG 61.406 60.000 8.12 7.23 0.00 4.10
6550 6967 0.109272 TCGAGGACAGCGATGACAAC 60.109 55.000 8.12 0.00 32.09 3.32
6551 6968 0.817654 ATCGAGGACAGCGATGACAA 59.182 50.000 8.12 0.00 45.74 3.18
6552 6969 2.493547 ATCGAGGACAGCGATGACA 58.506 52.632 8.12 0.00 45.74 3.58
6557 6974 1.743995 TCGTCATCGAGGACAGCGA 60.744 57.895 27.59 17.50 41.35 4.93
6558 6975 2.791927 TCGTCATCGAGGACAGCG 59.208 61.111 27.59 15.51 41.35 5.18
6567 6984 1.658717 GGAGGCGTCATCGTCATCG 60.659 63.158 8.91 0.00 44.74 3.84
6568 6985 0.103208 AAGGAGGCGTCATCGTCATC 59.897 55.000 8.91 0.00 44.74 2.92
6569 6986 0.103208 GAAGGAGGCGTCATCGTCAT 59.897 55.000 8.91 0.00 44.74 3.06
6570 6987 1.511305 GAAGGAGGCGTCATCGTCA 59.489 57.895 8.91 0.00 44.74 4.35
6571 6988 1.586564 CGAAGGAGGCGTCATCGTC 60.587 63.158 19.47 4.65 42.44 4.20
6572 6989 2.341101 ACGAAGGAGGCGTCATCGT 61.341 57.895 24.54 24.54 40.16 3.73
6573 6990 2.490217 ACGAAGGAGGCGTCATCG 59.510 61.111 23.55 23.55 37.42 3.84
6605 7022 4.858200 GCAGCGATTCGTGCAGCG 62.858 66.667 20.84 0.00 39.62 5.18
6606 7023 3.792047 TGCAGCGATTCGTGCAGC 61.792 61.111 23.07 15.48 44.70 5.25
6609 7026 3.869272 CCCTGCAGCGATTCGTGC 61.869 66.667 19.70 19.70 40.29 5.34
6610 7027 3.869272 GCCCTGCAGCGATTCGTG 61.869 66.667 8.66 6.16 0.00 4.35
6638 7055 1.709147 CTGAAAATGGCGAGGGAGCG 61.709 60.000 0.00 0.00 38.18 5.03
6639 7056 1.379642 CCTGAAAATGGCGAGGGAGC 61.380 60.000 0.00 0.00 0.00 4.70
6640 7057 2.785868 CCTGAAAATGGCGAGGGAG 58.214 57.895 0.00 0.00 0.00 4.30
6642 7059 1.302949 TCCCTGAAAATGGCGAGGG 59.697 57.895 0.00 0.00 45.97 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.