Multiple sequence alignment - TraesCS4A01G091500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G091500 chr4A 100.000 2580 0 0 1 2580 98541709 98544288 0.000000e+00 4765
1 TraesCS4A01G091500 chr4A 98.276 116 2 0 1620 1735 646314591 646314476 1.210000e-48 204
2 TraesCS4A01G091500 chr2B 95.729 1194 45 4 435 1623 335503507 335502315 0.000000e+00 1917
3 TraesCS4A01G091500 chr2B 95.382 1191 51 2 437 1623 736318542 736317352 0.000000e+00 1892
4 TraesCS4A01G091500 chr2B 98.111 847 16 0 1734 2580 736317369 736316523 0.000000e+00 1476
5 TraesCS4A01G091500 chr3B 95.711 1189 46 2 437 1623 325856779 325857964 0.000000e+00 1908
6 TraesCS4A01G091500 chr3B 95.466 1191 50 2 437 1623 527150011 527151201 0.000000e+00 1897
7 TraesCS4A01G091500 chr3B 98.111 847 16 0 1734 2580 527151184 527152030 0.000000e+00 1476
8 TraesCS4A01G091500 chr3B 97.458 118 3 0 1618 1735 701414612 701414729 4.350000e-48 202
9 TraesCS4A01G091500 chr5D 95.918 1176 41 4 452 1623 141436892 141435720 0.000000e+00 1899
10 TraesCS4A01G091500 chr5D 98.229 847 15 0 1734 2580 162421802 162420956 0.000000e+00 1482
11 TraesCS4A01G091500 chr5D 98.111 847 16 0 1734 2580 135064325 135065171 0.000000e+00 1476
12 TraesCS4A01G091500 chr2A 95.546 1190 46 3 437 1623 278460097 278458912 0.000000e+00 1897
13 TraesCS4A01G091500 chr2A 98.198 111 2 0 1625 1735 526067738 526067628 7.280000e-46 195
14 TraesCS4A01G091500 chr4B 95.674 1179 46 3 448 1623 295679715 295680891 0.000000e+00 1890
15 TraesCS4A01G091500 chr4B 95.310 1194 49 2 437 1623 260060988 260059795 0.000000e+00 1888
16 TraesCS4A01G091500 chr4B 95.205 438 17 3 1 436 451502334 451501899 0.000000e+00 689
17 TraesCS4A01G091500 chr4B 98.291 117 2 0 1623 1739 147704782 147704898 3.370000e-49 206
18 TraesCS4A01G091500 chr2D 95.306 1193 49 2 437 1623 386340538 386341729 0.000000e+00 1886
19 TraesCS4A01G091500 chr7D 98.229 847 15 0 1734 2580 274870520 274869674 0.000000e+00 1482
20 TraesCS4A01G091500 chr3D 98.111 847 16 0 1734 2580 76391093 76390247 0.000000e+00 1476
21 TraesCS4A01G091500 chr6D 97.993 847 17 0 1734 2580 65403477 65402631 0.000000e+00 1471
22 TraesCS4A01G091500 chr6D 97.993 847 17 0 1734 2580 202468219 202467373 0.000000e+00 1471
23 TraesCS4A01G091500 chr6D 97.993 847 17 0 1734 2580 218431802 218432648 0.000000e+00 1471
24 TraesCS4A01G091500 chr4D 95.890 438 15 2 1 436 366703799 366703363 0.000000e+00 706
25 TraesCS4A01G091500 chr3A 98.276 116 2 0 1620 1735 353638682 353638797 1.210000e-48 204
26 TraesCS4A01G091500 chr3A 96.667 120 4 0 1616 1735 616251779 616251660 1.570000e-47 200
27 TraesCS4A01G091500 chr7B 97.479 119 2 1 1617 1735 395552378 395552261 4.350000e-48 202
28 TraesCS4A01G091500 chr5A 95.935 123 5 0 1613 1735 398260391 398260513 1.570000e-47 200
29 TraesCS4A01G091500 chr1B 96.694 121 2 2 1617 1735 609437855 609437975 1.570000e-47 200


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G091500 chr4A 98541709 98544288 2579 False 4765.0 4765 100.0000 1 2580 1 chr4A.!!$F1 2579
1 TraesCS4A01G091500 chr2B 335502315 335503507 1192 True 1917.0 1917 95.7290 435 1623 1 chr2B.!!$R1 1188
2 TraesCS4A01G091500 chr2B 736316523 736318542 2019 True 1684.0 1892 96.7465 437 2580 2 chr2B.!!$R2 2143
3 TraesCS4A01G091500 chr3B 325856779 325857964 1185 False 1908.0 1908 95.7110 437 1623 1 chr3B.!!$F1 1186
4 TraesCS4A01G091500 chr3B 527150011 527152030 2019 False 1686.5 1897 96.7885 437 2580 2 chr3B.!!$F3 2143
5 TraesCS4A01G091500 chr5D 141435720 141436892 1172 True 1899.0 1899 95.9180 452 1623 1 chr5D.!!$R1 1171
6 TraesCS4A01G091500 chr5D 162420956 162421802 846 True 1482.0 1482 98.2290 1734 2580 1 chr5D.!!$R2 846
7 TraesCS4A01G091500 chr5D 135064325 135065171 846 False 1476.0 1476 98.1110 1734 2580 1 chr5D.!!$F1 846
8 TraesCS4A01G091500 chr2A 278458912 278460097 1185 True 1897.0 1897 95.5460 437 1623 1 chr2A.!!$R1 1186
9 TraesCS4A01G091500 chr4B 295679715 295680891 1176 False 1890.0 1890 95.6740 448 1623 1 chr4B.!!$F2 1175
10 TraesCS4A01G091500 chr4B 260059795 260060988 1193 True 1888.0 1888 95.3100 437 1623 1 chr4B.!!$R1 1186
11 TraesCS4A01G091500 chr2D 386340538 386341729 1191 False 1886.0 1886 95.3060 437 1623 1 chr2D.!!$F1 1186
12 TraesCS4A01G091500 chr7D 274869674 274870520 846 True 1482.0 1482 98.2290 1734 2580 1 chr7D.!!$R1 846
13 TraesCS4A01G091500 chr3D 76390247 76391093 846 True 1476.0 1476 98.1110 1734 2580 1 chr3D.!!$R1 846
14 TraesCS4A01G091500 chr6D 65402631 65403477 846 True 1471.0 1471 97.9930 1734 2580 1 chr6D.!!$R1 846
15 TraesCS4A01G091500 chr6D 202467373 202468219 846 True 1471.0 1471 97.9930 1734 2580 1 chr6D.!!$R2 846
16 TraesCS4A01G091500 chr6D 218431802 218432648 846 False 1471.0 1471 97.9930 1734 2580 1 chr6D.!!$F1 846

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.324614 TTCTCAAAGAGGCGCATGGA 59.675 50.0 10.83 0.0 0.00 3.41 F
331 332 0.445436 CATTTCTGCACCGAGCTGTC 59.555 55.0 0.00 0.0 45.94 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1299 1313 0.032813 TAGGGTTGGGTACTCTCCGG 60.033 60.0 0.00 0.0 38.87 5.14 R
1669 1683 0.178912 AAGTGGTCGGACCCTTACCT 60.179 55.0 23.81 9.2 37.50 3.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.789574 ATATACACCCAACCCTTCTCAAA 57.210 39.130 0.00 0.00 0.00 2.69
23 24 2.364972 ACACCCAACCCTTCTCAAAG 57.635 50.000 0.00 0.00 0.00 2.77
24 25 1.850345 ACACCCAACCCTTCTCAAAGA 59.150 47.619 0.00 0.00 34.14 2.52
25 26 2.158608 ACACCCAACCCTTCTCAAAGAG 60.159 50.000 0.00 0.00 34.14 2.85
26 27 1.425448 ACCCAACCCTTCTCAAAGAGG 59.575 52.381 0.00 0.00 34.14 3.69
27 28 1.539157 CCAACCCTTCTCAAAGAGGC 58.461 55.000 0.00 0.00 34.14 4.70
28 29 1.160137 CAACCCTTCTCAAAGAGGCG 58.840 55.000 0.00 0.00 34.14 5.52
29 30 0.606673 AACCCTTCTCAAAGAGGCGC 60.607 55.000 0.00 0.00 34.14 6.53
30 31 1.003355 CCCTTCTCAAAGAGGCGCA 60.003 57.895 10.83 0.00 34.14 6.09
31 32 0.393537 CCCTTCTCAAAGAGGCGCAT 60.394 55.000 10.83 0.00 34.14 4.73
32 33 0.731417 CCTTCTCAAAGAGGCGCATG 59.269 55.000 10.83 0.00 34.14 4.06
33 34 0.731417 CTTCTCAAAGAGGCGCATGG 59.269 55.000 10.83 0.00 34.14 3.66
34 35 0.324614 TTCTCAAAGAGGCGCATGGA 59.675 50.000 10.83 0.00 0.00 3.41
35 36 0.543277 TCTCAAAGAGGCGCATGGAT 59.457 50.000 10.83 0.00 0.00 3.41
36 37 1.762370 TCTCAAAGAGGCGCATGGATA 59.238 47.619 10.83 0.00 0.00 2.59
37 38 2.369860 TCTCAAAGAGGCGCATGGATAT 59.630 45.455 10.83 0.00 0.00 1.63
38 39 3.144506 CTCAAAGAGGCGCATGGATATT 58.855 45.455 10.83 0.00 0.00 1.28
39 40 3.141398 TCAAAGAGGCGCATGGATATTC 58.859 45.455 10.83 0.00 0.00 1.75
40 41 2.191128 AAGAGGCGCATGGATATTCC 57.809 50.000 10.83 0.00 36.96 3.01
41 42 1.356124 AGAGGCGCATGGATATTCCT 58.644 50.000 10.83 0.00 37.46 3.36
42 43 2.540383 AGAGGCGCATGGATATTCCTA 58.460 47.619 10.83 0.00 37.46 2.94
43 44 3.110705 AGAGGCGCATGGATATTCCTAT 58.889 45.455 10.83 0.00 37.46 2.57
44 45 3.521126 AGAGGCGCATGGATATTCCTATT 59.479 43.478 10.83 0.00 37.46 1.73
45 46 4.716784 AGAGGCGCATGGATATTCCTATTA 59.283 41.667 10.83 0.00 37.46 0.98
46 47 5.367937 AGAGGCGCATGGATATTCCTATTAT 59.632 40.000 10.83 0.00 37.46 1.28
47 48 5.371526 AGGCGCATGGATATTCCTATTATG 58.628 41.667 10.83 0.00 37.46 1.90
48 49 5.104360 AGGCGCATGGATATTCCTATTATGT 60.104 40.000 10.83 0.00 37.46 2.29
49 50 6.099701 AGGCGCATGGATATTCCTATTATGTA 59.900 38.462 10.83 0.00 37.46 2.29
50 51 6.202954 GGCGCATGGATATTCCTATTATGTAC 59.797 42.308 10.83 0.00 37.46 2.90
51 52 6.202954 GCGCATGGATATTCCTATTATGTACC 59.797 42.308 0.30 0.00 37.46 3.34
52 53 7.500992 CGCATGGATATTCCTATTATGTACCT 58.499 38.462 0.00 0.00 37.46 3.08
53 54 7.987458 CGCATGGATATTCCTATTATGTACCTT 59.013 37.037 0.00 0.00 37.46 3.50
54 55 9.331282 GCATGGATATTCCTATTATGTACCTTC 57.669 37.037 0.00 0.00 37.46 3.46
55 56 9.838339 CATGGATATTCCTATTATGTACCTTCC 57.162 37.037 0.00 0.00 37.46 3.46
56 57 9.805204 ATGGATATTCCTATTATGTACCTTCCT 57.195 33.333 0.00 0.00 37.46 3.36
63 64 9.956558 TTCCTATTATGTACCTTCCTAACCTAA 57.043 33.333 0.00 0.00 0.00 2.69
69 70 6.494666 TGTACCTTCCTAACCTAATGATGG 57.505 41.667 0.00 0.00 0.00 3.51
70 71 5.368523 TGTACCTTCCTAACCTAATGATGGG 59.631 44.000 0.00 0.00 0.00 4.00
71 72 3.138468 ACCTTCCTAACCTAATGATGGGC 59.862 47.826 0.00 0.00 0.00 5.36
72 73 3.138283 CCTTCCTAACCTAATGATGGGCA 59.862 47.826 0.00 0.00 0.00 5.36
73 74 4.202609 CCTTCCTAACCTAATGATGGGCAT 60.203 45.833 0.00 0.00 39.43 4.40
74 75 4.640771 TCCTAACCTAATGATGGGCATC 57.359 45.455 0.00 0.00 35.78 3.91
84 85 2.789213 TGATGGGCATCAAAACTTCGA 58.211 42.857 0.00 0.00 44.14 3.71
85 86 3.153130 TGATGGGCATCAAAACTTCGAA 58.847 40.909 0.00 0.00 44.14 3.71
86 87 3.571828 TGATGGGCATCAAAACTTCGAAA 59.428 39.130 0.00 0.00 44.14 3.46
87 88 4.220382 TGATGGGCATCAAAACTTCGAAAT 59.780 37.500 0.00 0.00 44.14 2.17
88 89 4.599047 TGGGCATCAAAACTTCGAAATT 57.401 36.364 0.00 0.00 0.00 1.82
89 90 5.713792 TGGGCATCAAAACTTCGAAATTA 57.286 34.783 0.00 0.00 0.00 1.40
90 91 5.465935 TGGGCATCAAAACTTCGAAATTAC 58.534 37.500 0.00 0.00 0.00 1.89
91 92 5.010112 TGGGCATCAAAACTTCGAAATTACA 59.990 36.000 0.00 0.00 0.00 2.41
92 93 6.099341 GGGCATCAAAACTTCGAAATTACAT 58.901 36.000 0.00 0.00 0.00 2.29
93 94 6.589907 GGGCATCAAAACTTCGAAATTACATT 59.410 34.615 0.00 0.00 0.00 2.71
94 95 7.117667 GGGCATCAAAACTTCGAAATTACATTT 59.882 33.333 0.00 0.00 34.64 2.32
95 96 9.134734 GGCATCAAAACTTCGAAATTACATTTA 57.865 29.630 0.00 0.00 31.47 1.40
121 122 9.911788 ATTCATTATACCTCATCTGACACTTTT 57.088 29.630 0.00 0.00 0.00 2.27
122 123 9.739276 TTCATTATACCTCATCTGACACTTTTT 57.261 29.630 0.00 0.00 0.00 1.94
123 124 9.383519 TCATTATACCTCATCTGACACTTTTTC 57.616 33.333 0.00 0.00 0.00 2.29
124 125 9.388506 CATTATACCTCATCTGACACTTTTTCT 57.611 33.333 0.00 0.00 0.00 2.52
126 127 9.871238 TTATACCTCATCTGACACTTTTTCTAC 57.129 33.333 0.00 0.00 0.00 2.59
127 128 5.552178 ACCTCATCTGACACTTTTTCTACC 58.448 41.667 0.00 0.00 0.00 3.18
128 129 5.308237 ACCTCATCTGACACTTTTTCTACCT 59.692 40.000 0.00 0.00 0.00 3.08
129 130 6.183361 ACCTCATCTGACACTTTTTCTACCTT 60.183 38.462 0.00 0.00 0.00 3.50
130 131 7.016268 ACCTCATCTGACACTTTTTCTACCTTA 59.984 37.037 0.00 0.00 0.00 2.69
131 132 8.043710 CCTCATCTGACACTTTTTCTACCTTAT 58.956 37.037 0.00 0.00 0.00 1.73
160 161 9.793252 AGCTAAATAAACAATGAACATGATGAC 57.207 29.630 0.00 0.00 0.00 3.06
161 162 9.571810 GCTAAATAAACAATGAACATGATGACA 57.428 29.630 0.00 0.00 0.00 3.58
163 164 8.991243 AAATAAACAATGAACATGATGACAGG 57.009 30.769 0.00 0.00 0.00 4.00
164 165 7.943079 ATAAACAATGAACATGATGACAGGA 57.057 32.000 0.00 0.00 0.00 3.86
165 166 5.633830 AACAATGAACATGATGACAGGAC 57.366 39.130 0.00 0.00 0.00 3.85
166 167 4.914983 ACAATGAACATGATGACAGGACT 58.085 39.130 0.00 0.00 0.00 3.85
167 168 5.319453 ACAATGAACATGATGACAGGACTT 58.681 37.500 0.00 0.00 0.00 3.01
168 169 5.413833 ACAATGAACATGATGACAGGACTTC 59.586 40.000 0.00 0.00 0.00 3.01
169 170 4.622260 TGAACATGATGACAGGACTTCA 57.378 40.909 0.00 0.00 0.00 3.02
170 171 4.971939 TGAACATGATGACAGGACTTCAA 58.028 39.130 0.00 0.00 0.00 2.69
171 172 5.375773 TGAACATGATGACAGGACTTCAAA 58.624 37.500 0.00 0.00 0.00 2.69
172 173 6.005823 TGAACATGATGACAGGACTTCAAAT 58.994 36.000 0.00 0.00 0.00 2.32
173 174 7.167535 TGAACATGATGACAGGACTTCAAATA 58.832 34.615 0.00 0.00 0.00 1.40
174 175 7.830697 TGAACATGATGACAGGACTTCAAATAT 59.169 33.333 0.00 0.00 0.00 1.28
175 176 8.585471 AACATGATGACAGGACTTCAAATATT 57.415 30.769 0.00 0.00 0.00 1.28
176 177 8.585471 ACATGATGACAGGACTTCAAATATTT 57.415 30.769 0.00 0.00 0.00 1.40
177 178 9.028284 ACATGATGACAGGACTTCAAATATTTT 57.972 29.630 0.00 0.00 0.00 1.82
178 179 9.297586 CATGATGACAGGACTTCAAATATTTTG 57.702 33.333 0.00 0.00 0.00 2.44
179 180 8.634335 TGATGACAGGACTTCAAATATTTTGA 57.366 30.769 0.00 0.00 0.00 2.69
180 181 8.733458 TGATGACAGGACTTCAAATATTTTGAG 58.267 33.333 0.00 2.31 0.00 3.02
181 182 8.868522 ATGACAGGACTTCAAATATTTTGAGA 57.131 30.769 12.32 0.00 0.00 3.27
182 183 8.868522 TGACAGGACTTCAAATATTTTGAGAT 57.131 30.769 12.32 0.00 0.00 2.75
183 184 9.300681 TGACAGGACTTCAAATATTTTGAGATT 57.699 29.630 12.32 0.00 0.00 2.40
184 185 9.780413 GACAGGACTTCAAATATTTTGAGATTC 57.220 33.333 12.32 2.38 0.00 2.52
185 186 8.743714 ACAGGACTTCAAATATTTTGAGATTCC 58.256 33.333 12.32 13.44 0.00 3.01
186 187 8.964772 CAGGACTTCAAATATTTTGAGATTCCT 58.035 33.333 15.99 15.99 35.20 3.36
187 188 9.539194 AGGACTTCAAATATTTTGAGATTCCTT 57.461 29.630 15.99 7.37 33.03 3.36
199 200 6.549912 TTGAGATTCCTTATCATGAATGCG 57.450 37.500 0.00 0.00 35.59 4.73
200 201 5.857268 TGAGATTCCTTATCATGAATGCGA 58.143 37.500 0.00 0.00 35.59 5.10
201 202 5.930569 TGAGATTCCTTATCATGAATGCGAG 59.069 40.000 0.00 0.00 35.59 5.03
202 203 4.694509 AGATTCCTTATCATGAATGCGAGC 59.305 41.667 0.00 0.00 35.59 5.03
203 204 3.758755 TCCTTATCATGAATGCGAGCT 57.241 42.857 0.00 0.00 0.00 4.09
204 205 4.871933 TCCTTATCATGAATGCGAGCTA 57.128 40.909 0.00 0.00 0.00 3.32
205 206 5.411831 TCCTTATCATGAATGCGAGCTAT 57.588 39.130 0.00 0.00 0.00 2.97
206 207 5.414360 TCCTTATCATGAATGCGAGCTATC 58.586 41.667 0.00 0.00 0.00 2.08
207 208 4.569966 CCTTATCATGAATGCGAGCTATCC 59.430 45.833 0.00 0.00 0.00 2.59
208 209 3.977134 ATCATGAATGCGAGCTATCCT 57.023 42.857 0.00 0.00 0.00 3.24
209 210 3.758755 TCATGAATGCGAGCTATCCTT 57.241 42.857 0.00 0.00 0.00 3.36
210 211 4.871933 TCATGAATGCGAGCTATCCTTA 57.128 40.909 0.00 0.00 0.00 2.69
211 212 5.411831 TCATGAATGCGAGCTATCCTTAT 57.588 39.130 0.00 0.00 0.00 1.73
212 213 5.173664 TCATGAATGCGAGCTATCCTTATG 58.826 41.667 0.00 0.00 0.00 1.90
213 214 4.607293 TGAATGCGAGCTATCCTTATGT 57.393 40.909 0.00 0.00 0.00 2.29
214 215 4.960938 TGAATGCGAGCTATCCTTATGTT 58.039 39.130 0.00 0.00 0.00 2.71
215 216 5.368145 TGAATGCGAGCTATCCTTATGTTT 58.632 37.500 0.00 0.00 0.00 2.83
216 217 5.822519 TGAATGCGAGCTATCCTTATGTTTT 59.177 36.000 0.00 0.00 0.00 2.43
217 218 6.318648 TGAATGCGAGCTATCCTTATGTTTTT 59.681 34.615 0.00 0.00 0.00 1.94
218 219 5.734855 TGCGAGCTATCCTTATGTTTTTC 57.265 39.130 0.00 0.00 0.00 2.29
219 220 5.428253 TGCGAGCTATCCTTATGTTTTTCT 58.572 37.500 0.00 0.00 0.00 2.52
220 221 5.880332 TGCGAGCTATCCTTATGTTTTTCTT 59.120 36.000 0.00 0.00 0.00 2.52
221 222 6.183360 TGCGAGCTATCCTTATGTTTTTCTTG 60.183 38.462 0.00 0.00 0.00 3.02
222 223 6.183360 GCGAGCTATCCTTATGTTTTTCTTGT 60.183 38.462 0.00 0.00 0.00 3.16
223 224 7.011109 GCGAGCTATCCTTATGTTTTTCTTGTA 59.989 37.037 0.00 0.00 0.00 2.41
224 225 9.046296 CGAGCTATCCTTATGTTTTTCTTGTAT 57.954 33.333 0.00 0.00 0.00 2.29
226 227 9.905713 AGCTATCCTTATGTTTTTCTTGTATCA 57.094 29.630 0.00 0.00 0.00 2.15
234 235 9.770097 TTATGTTTTTCTTGTATCAATTTGGCA 57.230 25.926 0.00 0.00 0.00 4.92
235 236 7.712264 TGTTTTTCTTGTATCAATTTGGCAG 57.288 32.000 0.00 0.00 0.00 4.85
236 237 7.271511 TGTTTTTCTTGTATCAATTTGGCAGT 58.728 30.769 0.00 0.00 0.00 4.40
237 238 7.437862 TGTTTTTCTTGTATCAATTTGGCAGTC 59.562 33.333 0.00 0.00 0.00 3.51
238 239 6.899393 TTTCTTGTATCAATTTGGCAGTCT 57.101 33.333 0.00 0.00 0.00 3.24
239 240 7.994425 TTTCTTGTATCAATTTGGCAGTCTA 57.006 32.000 0.00 0.00 0.00 2.59
240 241 8.579850 TTTCTTGTATCAATTTGGCAGTCTAT 57.420 30.769 0.00 0.00 0.00 1.98
241 242 8.579850 TTCTTGTATCAATTTGGCAGTCTATT 57.420 30.769 0.00 0.00 0.00 1.73
242 243 8.579850 TCTTGTATCAATTTGGCAGTCTATTT 57.420 30.769 0.00 0.00 0.00 1.40
243 244 9.023962 TCTTGTATCAATTTGGCAGTCTATTTT 57.976 29.630 0.00 0.00 0.00 1.82
246 247 8.394877 TGTATCAATTTGGCAGTCTATTTTACG 58.605 33.333 0.00 0.00 0.00 3.18
247 248 7.624360 ATCAATTTGGCAGTCTATTTTACGA 57.376 32.000 0.00 0.00 0.00 3.43
248 249 7.441890 TCAATTTGGCAGTCTATTTTACGAA 57.558 32.000 0.00 0.00 0.00 3.85
249 250 7.526608 TCAATTTGGCAGTCTATTTTACGAAG 58.473 34.615 0.00 0.00 0.00 3.79
251 252 8.447833 CAATTTGGCAGTCTATTTTACGAAGTA 58.552 33.333 0.00 0.00 45.11 2.24
266 267 5.880054 ACGAAGTAACTTGCAATATGCTT 57.120 34.783 12.55 12.55 42.19 3.91
267 268 5.869350 ACGAAGTAACTTGCAATATGCTTC 58.131 37.500 21.82 21.82 42.19 3.86
268 269 5.643777 ACGAAGTAACTTGCAATATGCTTCT 59.356 36.000 25.42 16.54 42.19 2.85
269 270 6.183360 ACGAAGTAACTTGCAATATGCTTCTC 60.183 38.462 25.42 12.38 42.19 2.87
270 271 6.036517 CGAAGTAACTTGCAATATGCTTCTCT 59.963 38.462 25.42 6.27 45.31 3.10
271 272 7.222805 CGAAGTAACTTGCAATATGCTTCTCTA 59.777 37.037 25.42 0.00 45.31 2.43
272 273 8.792830 AAGTAACTTGCAATATGCTTCTCTAA 57.207 30.769 0.00 0.00 45.31 2.10
273 274 8.430801 AGTAACTTGCAATATGCTTCTCTAAG 57.569 34.615 0.00 0.80 45.31 2.18
274 275 8.043710 AGTAACTTGCAATATGCTTCTCTAAGT 58.956 33.333 0.00 1.39 45.31 2.24
275 276 6.674694 ACTTGCAATATGCTTCTCTAAGTG 57.325 37.500 0.00 0.00 45.31 3.16
276 277 5.065731 ACTTGCAATATGCTTCTCTAAGTGC 59.934 40.000 0.00 0.00 45.31 4.40
277 278 3.879295 TGCAATATGCTTCTCTAAGTGCC 59.121 43.478 3.78 0.00 45.31 5.01
278 279 3.251972 GCAATATGCTTCTCTAAGTGCCC 59.748 47.826 0.00 0.00 40.96 5.36
279 280 4.712476 CAATATGCTTCTCTAAGTGCCCT 58.288 43.478 0.00 0.00 34.99 5.19
280 281 2.706339 ATGCTTCTCTAAGTGCCCTG 57.294 50.000 0.00 0.00 34.99 4.45
281 282 1.644509 TGCTTCTCTAAGTGCCCTGA 58.355 50.000 0.00 0.00 34.99 3.86
282 283 1.552337 TGCTTCTCTAAGTGCCCTGAG 59.448 52.381 0.00 0.00 34.99 3.35
283 284 1.827969 GCTTCTCTAAGTGCCCTGAGA 59.172 52.381 0.00 0.00 34.99 3.27
284 285 2.234908 GCTTCTCTAAGTGCCCTGAGAA 59.765 50.000 0.00 0.00 41.46 2.87
286 287 3.458044 TCTCTAAGTGCCCTGAGAAGA 57.542 47.619 0.00 0.00 33.30 2.87
287 288 3.093057 TCTCTAAGTGCCCTGAGAAGAC 58.907 50.000 0.00 0.00 33.30 3.01
288 289 3.096092 CTCTAAGTGCCCTGAGAAGACT 58.904 50.000 0.00 0.00 27.08 3.24
289 290 3.511477 TCTAAGTGCCCTGAGAAGACTT 58.489 45.455 0.00 0.00 0.00 3.01
290 291 2.849294 AAGTGCCCTGAGAAGACTTC 57.151 50.000 7.14 7.14 0.00 3.01
291 292 0.980423 AGTGCCCTGAGAAGACTTCC 59.020 55.000 11.67 4.40 0.00 3.46
292 293 0.687354 GTGCCCTGAGAAGACTTCCA 59.313 55.000 11.67 8.55 0.00 3.53
293 294 0.687354 TGCCCTGAGAAGACTTCCAC 59.313 55.000 11.67 7.23 0.00 4.02
294 295 0.980423 GCCCTGAGAAGACTTCCACT 59.020 55.000 11.67 0.00 0.00 4.00
295 296 1.349357 GCCCTGAGAAGACTTCCACTT 59.651 52.381 11.67 0.00 0.00 3.16
296 297 2.873649 GCCCTGAGAAGACTTCCACTTG 60.874 54.545 11.67 0.06 0.00 3.16
297 298 2.634940 CCCTGAGAAGACTTCCACTTGA 59.365 50.000 11.67 0.00 0.00 3.02
298 299 3.262915 CCCTGAGAAGACTTCCACTTGAT 59.737 47.826 11.67 0.00 0.00 2.57
299 300 4.502962 CCTGAGAAGACTTCCACTTGATC 58.497 47.826 11.67 1.91 0.00 2.92
300 301 4.502962 CTGAGAAGACTTCCACTTGATCC 58.497 47.826 11.67 0.00 0.00 3.36
301 302 4.163427 TGAGAAGACTTCCACTTGATCCT 58.837 43.478 11.67 0.00 0.00 3.24
302 303 4.020751 TGAGAAGACTTCCACTTGATCCTG 60.021 45.833 11.67 0.00 0.00 3.86
303 304 3.262915 AGAAGACTTCCACTTGATCCTGG 59.737 47.826 11.67 0.00 0.00 4.45
304 305 2.625639 AGACTTCCACTTGATCCTGGT 58.374 47.619 0.00 0.00 0.00 4.00
305 306 3.791320 AGACTTCCACTTGATCCTGGTA 58.209 45.455 0.00 0.00 0.00 3.25
306 307 4.168101 AGACTTCCACTTGATCCTGGTAA 58.832 43.478 0.00 0.00 0.00 2.85
307 308 4.785376 AGACTTCCACTTGATCCTGGTAAT 59.215 41.667 0.00 0.00 0.00 1.89
308 309 5.104259 ACTTCCACTTGATCCTGGTAATC 57.896 43.478 0.00 0.00 0.00 1.75
309 310 4.080299 ACTTCCACTTGATCCTGGTAATCC 60.080 45.833 0.00 0.00 0.00 3.01
310 311 3.459828 TCCACTTGATCCTGGTAATCCA 58.540 45.455 0.00 0.00 42.05 3.41
330 331 2.548178 CATTTCTGCACCGAGCTGT 58.452 52.632 0.00 0.00 45.94 4.40
331 332 0.445436 CATTTCTGCACCGAGCTGTC 59.555 55.000 0.00 0.00 45.94 3.51
332 333 0.674895 ATTTCTGCACCGAGCTGTCC 60.675 55.000 0.00 0.00 45.94 4.02
333 334 2.038814 TTTCTGCACCGAGCTGTCCA 62.039 55.000 0.00 0.00 45.94 4.02
334 335 2.031012 CTGCACCGAGCTGTCCAA 59.969 61.111 0.00 0.00 45.94 3.53
335 336 2.031012 TGCACCGAGCTGTCCAAG 59.969 61.111 0.00 0.00 45.94 3.61
336 337 2.743928 GCACCGAGCTGTCCAAGG 60.744 66.667 0.00 0.00 41.15 3.61
337 338 2.046892 CACCGAGCTGTCCAAGGG 60.047 66.667 0.00 0.00 0.00 3.95
338 339 2.526873 ACCGAGCTGTCCAAGGGT 60.527 61.111 0.00 0.00 0.00 4.34
339 340 2.046892 CCGAGCTGTCCAAGGGTG 60.047 66.667 0.00 0.00 0.00 4.61
340 341 2.583441 CCGAGCTGTCCAAGGGTGA 61.583 63.158 0.00 0.00 0.00 4.02
341 342 1.079543 CGAGCTGTCCAAGGGTGAG 60.080 63.158 0.00 0.00 0.00 3.51
342 343 1.821061 CGAGCTGTCCAAGGGTGAGT 61.821 60.000 0.00 0.00 0.00 3.41
343 344 1.267121 GAGCTGTCCAAGGGTGAGTA 58.733 55.000 0.00 0.00 0.00 2.59
344 345 1.623811 GAGCTGTCCAAGGGTGAGTAA 59.376 52.381 0.00 0.00 0.00 2.24
345 346 1.348036 AGCTGTCCAAGGGTGAGTAAC 59.652 52.381 0.00 0.00 0.00 2.50
346 347 1.348036 GCTGTCCAAGGGTGAGTAACT 59.652 52.381 0.00 0.00 0.00 2.24
347 348 2.224548 GCTGTCCAAGGGTGAGTAACTT 60.225 50.000 0.00 0.00 0.00 2.66
348 349 3.747708 GCTGTCCAAGGGTGAGTAACTTT 60.748 47.826 0.00 0.00 0.00 2.66
349 350 4.504340 GCTGTCCAAGGGTGAGTAACTTTA 60.504 45.833 0.00 0.00 0.00 1.85
350 351 5.803470 GCTGTCCAAGGGTGAGTAACTTTAT 60.803 44.000 0.00 0.00 0.00 1.40
351 352 6.195600 TGTCCAAGGGTGAGTAACTTTATT 57.804 37.500 0.00 0.00 0.00 1.40
352 353 6.001460 TGTCCAAGGGTGAGTAACTTTATTG 58.999 40.000 0.00 0.00 0.00 1.90
353 354 6.002082 GTCCAAGGGTGAGTAACTTTATTGT 58.998 40.000 0.00 0.00 0.00 2.71
354 355 6.148976 GTCCAAGGGTGAGTAACTTTATTGTC 59.851 42.308 0.00 0.00 0.00 3.18
355 356 6.043938 TCCAAGGGTGAGTAACTTTATTGTCT 59.956 38.462 0.00 0.00 0.00 3.41
356 357 6.371825 CCAAGGGTGAGTAACTTTATTGTCTC 59.628 42.308 0.00 0.00 0.00 3.36
357 358 6.936968 AGGGTGAGTAACTTTATTGTCTCT 57.063 37.500 0.00 0.00 0.00 3.10
358 359 6.702329 AGGGTGAGTAACTTTATTGTCTCTG 58.298 40.000 0.00 0.00 0.00 3.35
359 360 5.875359 GGGTGAGTAACTTTATTGTCTCTGG 59.125 44.000 0.00 0.00 0.00 3.86
360 361 5.875359 GGTGAGTAACTTTATTGTCTCTGGG 59.125 44.000 0.00 0.00 0.00 4.45
361 362 6.295688 GGTGAGTAACTTTATTGTCTCTGGGA 60.296 42.308 0.00 0.00 0.00 4.37
362 363 7.159372 GTGAGTAACTTTATTGTCTCTGGGAA 58.841 38.462 0.00 0.00 0.00 3.97
363 364 7.332182 GTGAGTAACTTTATTGTCTCTGGGAAG 59.668 40.741 0.00 0.00 0.00 3.46
364 365 7.234782 TGAGTAACTTTATTGTCTCTGGGAAGA 59.765 37.037 0.00 0.00 0.00 2.87
365 366 8.152023 AGTAACTTTATTGTCTCTGGGAAGAT 57.848 34.615 0.00 0.00 0.00 2.40
366 367 9.268282 AGTAACTTTATTGTCTCTGGGAAGATA 57.732 33.333 0.00 0.00 0.00 1.98
367 368 9.886132 GTAACTTTATTGTCTCTGGGAAGATAA 57.114 33.333 0.00 0.00 31.99 1.75
369 370 9.981460 AACTTTATTGTCTCTGGGAAGATAAAT 57.019 29.630 6.90 0.00 31.34 1.40
370 371 9.981460 ACTTTATTGTCTCTGGGAAGATAAATT 57.019 29.630 6.90 1.41 31.34 1.82
403 404 8.899427 TTTTCCATCTTGTATTCATTTTTGCA 57.101 26.923 0.00 0.00 0.00 4.08
404 405 7.887996 TTCCATCTTGTATTCATTTTTGCAC 57.112 32.000 0.00 0.00 0.00 4.57
405 406 6.397272 TCCATCTTGTATTCATTTTTGCACC 58.603 36.000 0.00 0.00 0.00 5.01
406 407 6.211184 TCCATCTTGTATTCATTTTTGCACCT 59.789 34.615 0.00 0.00 0.00 4.00
407 408 6.311935 CCATCTTGTATTCATTTTTGCACCTG 59.688 38.462 0.00 0.00 0.00 4.00
408 409 6.403866 TCTTGTATTCATTTTTGCACCTGT 57.596 33.333 0.00 0.00 0.00 4.00
409 410 6.815089 TCTTGTATTCATTTTTGCACCTGTT 58.185 32.000 0.00 0.00 0.00 3.16
410 411 7.271511 TCTTGTATTCATTTTTGCACCTGTTT 58.728 30.769 0.00 0.00 0.00 2.83
411 412 7.768120 TCTTGTATTCATTTTTGCACCTGTTTT 59.232 29.630 0.00 0.00 0.00 2.43
412 413 7.856145 TGTATTCATTTTTGCACCTGTTTTT 57.144 28.000 0.00 0.00 0.00 1.94
413 414 8.948631 TGTATTCATTTTTGCACCTGTTTTTA 57.051 26.923 0.00 0.00 0.00 1.52
414 415 9.553064 TGTATTCATTTTTGCACCTGTTTTTAT 57.447 25.926 0.00 0.00 0.00 1.40
417 418 7.489574 TCATTTTTGCACCTGTTTTTATTCC 57.510 32.000 0.00 0.00 0.00 3.01
418 419 7.050377 TCATTTTTGCACCTGTTTTTATTCCA 58.950 30.769 0.00 0.00 0.00 3.53
419 420 7.718753 TCATTTTTGCACCTGTTTTTATTCCAT 59.281 29.630 0.00 0.00 0.00 3.41
420 421 6.857777 TTTTGCACCTGTTTTTATTCCATG 57.142 33.333 0.00 0.00 0.00 3.66
421 422 5.798125 TTGCACCTGTTTTTATTCCATGA 57.202 34.783 0.00 0.00 0.00 3.07
422 423 5.389859 TGCACCTGTTTTTATTCCATGAG 57.610 39.130 0.00 0.00 0.00 2.90
423 424 4.832266 TGCACCTGTTTTTATTCCATGAGT 59.168 37.500 0.00 0.00 0.00 3.41
424 425 5.304101 TGCACCTGTTTTTATTCCATGAGTT 59.696 36.000 0.00 0.00 0.00 3.01
425 426 5.863935 GCACCTGTTTTTATTCCATGAGTTC 59.136 40.000 0.00 0.00 0.00 3.01
426 427 6.389906 CACCTGTTTTTATTCCATGAGTTCC 58.610 40.000 0.00 0.00 0.00 3.62
427 428 5.480422 ACCTGTTTTTATTCCATGAGTTCCC 59.520 40.000 0.00 0.00 0.00 3.97
428 429 5.480073 CCTGTTTTTATTCCATGAGTTCCCA 59.520 40.000 0.00 0.00 0.00 4.37
429 430 6.014669 CCTGTTTTTATTCCATGAGTTCCCAA 60.015 38.462 0.00 0.00 0.00 4.12
430 431 6.991938 TGTTTTTATTCCATGAGTTCCCAAG 58.008 36.000 0.00 0.00 0.00 3.61
431 432 6.780031 TGTTTTTATTCCATGAGTTCCCAAGA 59.220 34.615 0.00 0.00 0.00 3.02
432 433 7.039784 TGTTTTTATTCCATGAGTTCCCAAGAG 60.040 37.037 0.00 0.00 0.00 2.85
433 434 3.659183 ATTCCATGAGTTCCCAAGAGG 57.341 47.619 0.00 0.00 0.00 3.69
590 593 7.612244 AGTCTTCTAGTTGTGAGTAGCTATGAA 59.388 37.037 0.00 0.00 0.00 2.57
720 724 2.149578 CGAGACTATGTACCCCTACCG 58.850 57.143 0.00 0.00 0.00 4.02
759 763 9.660180 GTTGTTCTTATCTAAGATCTTGGAGTT 57.340 33.333 23.64 12.61 41.52 3.01
977 982 5.451242 CCATACTAGTTCTTGCTGTCCTCTC 60.451 48.000 0.00 0.00 0.00 3.20
1017 1022 3.167485 AGCAATGGAGCAATTGGAGAAA 58.833 40.909 7.72 0.00 37.89 2.52
1029 1034 3.454719 TTGGAGAAAAGGATGGATGCA 57.545 42.857 0.00 0.00 0.00 3.96
1126 1131 2.092103 GGTGTTCCCCATGCTACCAATA 60.092 50.000 0.00 0.00 0.00 1.90
1145 1150 8.986929 ACCAATAAAGGAGATTCATCTAAAGG 57.013 34.615 0.00 0.00 37.25 3.11
1297 1311 5.349061 TGAAGAAGCTGATCTCTATGCAA 57.651 39.130 0.00 0.00 0.00 4.08
1299 1313 5.583854 TGAAGAAGCTGATCTCTATGCAAAC 59.416 40.000 0.00 0.00 0.00 2.93
1413 1427 6.296026 GTGCCTGGATTGGTTATATGAAGTA 58.704 40.000 0.00 0.00 0.00 2.24
1442 1456 3.251484 TCTTTGAGGTCATGGAGGTTCT 58.749 45.455 0.00 0.00 0.00 3.01
1559 1573 1.414919 ACCTCGTGTTAGAACTTGGCA 59.585 47.619 0.00 0.00 0.00 4.92
1647 1661 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
1648 1662 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
1649 1663 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
1650 1664 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
1651 1665 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
1657 1671 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
1658 1672 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
1659 1673 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
1660 1674 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
1663 1677 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
1672 1686 4.335647 CTTGCGCAGGGTCCAGGT 62.336 66.667 12.39 0.00 0.00 4.00
1673 1687 2.925706 TTGCGCAGGGTCCAGGTA 60.926 61.111 11.31 0.00 0.00 3.08
1674 1688 2.463589 CTTGCGCAGGGTCCAGGTAA 62.464 60.000 12.39 0.00 0.00 2.85
1675 1689 2.125106 GCGCAGGGTCCAGGTAAG 60.125 66.667 0.30 0.00 0.00 2.34
1676 1690 2.584608 CGCAGGGTCCAGGTAAGG 59.415 66.667 0.00 0.00 0.00 2.69
1677 1691 2.998949 GCAGGGTCCAGGTAAGGG 59.001 66.667 0.00 0.00 0.00 3.95
1678 1692 1.923909 GCAGGGTCCAGGTAAGGGT 60.924 63.158 0.00 0.00 0.00 4.34
1679 1693 1.911702 GCAGGGTCCAGGTAAGGGTC 61.912 65.000 0.00 0.00 0.00 4.46
1680 1694 1.082392 AGGGTCCAGGTAAGGGTCC 59.918 63.158 0.00 0.00 0.00 4.46
1681 1695 2.364780 GGGTCCAGGTAAGGGTCCG 61.365 68.421 0.00 0.00 0.00 4.79
1682 1696 1.305549 GGTCCAGGTAAGGGTCCGA 60.306 63.158 0.00 0.00 0.00 4.55
1683 1697 1.611474 GGTCCAGGTAAGGGTCCGAC 61.611 65.000 0.00 0.00 0.00 4.79
1684 1698 1.305549 TCCAGGTAAGGGTCCGACC 60.306 63.158 9.30 9.30 37.60 4.79
1685 1699 1.611261 CCAGGTAAGGGTCCGACCA 60.611 63.158 19.43 0.00 41.02 4.02
1686 1700 1.595357 CAGGTAAGGGTCCGACCAC 59.405 63.158 19.43 8.76 41.02 4.16
1687 1701 0.903454 CAGGTAAGGGTCCGACCACT 60.903 60.000 19.43 10.80 41.02 4.00
1688 1702 0.178912 AGGTAAGGGTCCGACCACTT 60.179 55.000 19.43 19.32 41.02 3.16
1689 1703 0.689055 GGTAAGGGTCCGACCACTTT 59.311 55.000 19.43 12.03 41.02 2.66
1690 1704 1.609841 GGTAAGGGTCCGACCACTTTG 60.610 57.143 19.43 0.00 41.02 2.77
1691 1705 0.688487 TAAGGGTCCGACCACTTTGG 59.312 55.000 19.43 0.00 41.02 3.28
1692 1706 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
1693 1707 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
1703 1717 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
1704 1718 3.131755 ACCACTTTGGGTCTATAGTACGC 59.868 47.826 0.00 6.13 43.37 4.42
1705 1719 3.131577 CCACTTTGGGTCTATAGTACGCA 59.868 47.826 13.98 13.98 37.94 5.24
1706 1720 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
1707 1721 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
1708 1722 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
1709 1723 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
1710 1724 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
1711 1725 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
1712 1726 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
1713 1727 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
1714 1728 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
1715 1729 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
1716 1730 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
1717 1731 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
1718 1732 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
1719 1733 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
1720 1734 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
1721 1735 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
1722 1736 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
1723 1737 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
1724 1738 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
1725 1739 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
1726 1740 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
1727 1741 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
1728 1742 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
1729 1743 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
2011 2025 3.303938 AGGCTCCATATCCTCCATATCG 58.696 50.000 0.00 0.00 0.00 2.92
2036 2050 1.698506 CCGAAGGCTCATCTAGGAGT 58.301 55.000 0.00 0.00 46.14 3.85
2061 2075 7.334671 GTCAACCTAATAGAGTGGAAGAAAAGG 59.665 40.741 0.00 0.00 0.00 3.11
2096 2110 0.965439 CAAAACAGCCCATCCCGAAA 59.035 50.000 0.00 0.00 0.00 3.46
2238 2252 6.173339 GGTGAAAGTGATGAGGAAGAATACA 58.827 40.000 0.00 0.00 0.00 2.29
2282 2296 3.481453 AGAGGTTTGTCAAGAAGAAGGC 58.519 45.455 0.00 0.00 0.00 4.35
2310 2324 1.134818 TGGTATGTGTGATCCAGCGTC 60.135 52.381 0.00 0.00 0.00 5.19
2366 2380 7.023575 CACAACGGAAGAAAATATTTGAGAGG 58.976 38.462 0.39 0.00 0.00 3.69
2416 2430 6.206438 TGCAAAGTAGTGATTGATAGTTGCAA 59.794 34.615 0.00 0.00 0.00 4.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.847512 TCTTTGAGAAGGGTTGGGTGTATA 59.152 41.667 0.00 0.00 33.56 1.47
2 3 3.655777 TCTTTGAGAAGGGTTGGGTGTAT 59.344 43.478 0.00 0.00 33.56 2.29
3 4 3.050089 TCTTTGAGAAGGGTTGGGTGTA 58.950 45.455 0.00 0.00 33.56 2.90
4 5 1.850345 TCTTTGAGAAGGGTTGGGTGT 59.150 47.619 0.00 0.00 33.56 4.16
5 6 2.508526 CTCTTTGAGAAGGGTTGGGTG 58.491 52.381 0.00 0.00 33.56 4.61
6 7 1.425448 CCTCTTTGAGAAGGGTTGGGT 59.575 52.381 0.00 0.00 30.99 4.51
7 8 1.888391 GCCTCTTTGAGAAGGGTTGGG 60.888 57.143 0.00 0.00 30.99 4.12
8 9 1.539157 GCCTCTTTGAGAAGGGTTGG 58.461 55.000 0.00 0.00 30.99 3.77
9 10 1.160137 CGCCTCTTTGAGAAGGGTTG 58.840 55.000 0.00 0.00 30.99 3.77
10 11 0.606673 GCGCCTCTTTGAGAAGGGTT 60.607 55.000 0.00 0.00 30.99 4.11
11 12 1.003233 GCGCCTCTTTGAGAAGGGT 60.003 57.895 0.00 0.00 30.99 4.34
12 13 0.393537 ATGCGCCTCTTTGAGAAGGG 60.394 55.000 4.18 0.00 33.56 3.95
13 14 0.731417 CATGCGCCTCTTTGAGAAGG 59.269 55.000 4.18 0.00 33.56 3.46
14 15 0.731417 CCATGCGCCTCTTTGAGAAG 59.269 55.000 4.18 0.00 0.00 2.85
15 16 0.324614 TCCATGCGCCTCTTTGAGAA 59.675 50.000 4.18 0.00 0.00 2.87
16 17 0.543277 ATCCATGCGCCTCTTTGAGA 59.457 50.000 4.18 0.00 0.00 3.27
17 18 2.245159 TATCCATGCGCCTCTTTGAG 57.755 50.000 4.18 0.00 0.00 3.02
18 19 2.936919 ATATCCATGCGCCTCTTTGA 57.063 45.000 4.18 0.00 0.00 2.69
19 20 2.227388 GGAATATCCATGCGCCTCTTTG 59.773 50.000 4.18 0.00 36.28 2.77
20 21 2.107204 AGGAATATCCATGCGCCTCTTT 59.893 45.455 4.18 0.00 39.61 2.52
21 22 1.701847 AGGAATATCCATGCGCCTCTT 59.298 47.619 4.18 0.00 39.61 2.85
22 23 1.356124 AGGAATATCCATGCGCCTCT 58.644 50.000 4.18 0.00 39.61 3.69
23 24 3.550437 ATAGGAATATCCATGCGCCTC 57.450 47.619 4.18 0.00 39.61 4.70
24 25 5.104360 ACATAATAGGAATATCCATGCGCCT 60.104 40.000 4.18 0.00 39.61 5.52
25 26 5.126067 ACATAATAGGAATATCCATGCGCC 58.874 41.667 4.18 0.00 39.61 6.53
26 27 6.202954 GGTACATAATAGGAATATCCATGCGC 59.797 42.308 0.00 0.00 39.61 6.09
27 28 7.500992 AGGTACATAATAGGAATATCCATGCG 58.499 38.462 0.00 0.00 39.61 4.73
28 29 9.331282 GAAGGTACATAATAGGAATATCCATGC 57.669 37.037 0.00 0.00 39.61 4.06
29 30 9.838339 GGAAGGTACATAATAGGAATATCCATG 57.162 37.037 0.00 0.00 39.61 3.66
30 31 9.805204 AGGAAGGTACATAATAGGAATATCCAT 57.195 33.333 0.00 0.00 39.61 3.41
37 38 9.956558 TTAGGTTAGGAAGGTACATAATAGGAA 57.043 33.333 0.00 0.00 0.00 3.36
43 44 8.656806 CCATCATTAGGTTAGGAAGGTACATAA 58.343 37.037 0.00 0.00 0.00 1.90
44 45 7.236847 CCCATCATTAGGTTAGGAAGGTACATA 59.763 40.741 0.00 0.00 0.00 2.29
45 46 6.044404 CCCATCATTAGGTTAGGAAGGTACAT 59.956 42.308 0.00 0.00 0.00 2.29
46 47 5.368523 CCCATCATTAGGTTAGGAAGGTACA 59.631 44.000 0.00 0.00 0.00 2.90
47 48 5.745181 GCCCATCATTAGGTTAGGAAGGTAC 60.745 48.000 0.00 0.00 0.00 3.34
48 49 4.349930 GCCCATCATTAGGTTAGGAAGGTA 59.650 45.833 0.00 0.00 0.00 3.08
49 50 3.138468 GCCCATCATTAGGTTAGGAAGGT 59.862 47.826 0.00 0.00 0.00 3.50
50 51 3.138283 TGCCCATCATTAGGTTAGGAAGG 59.862 47.826 0.00 0.00 0.00 3.46
51 52 4.437682 TGCCCATCATTAGGTTAGGAAG 57.562 45.455 0.00 0.00 0.00 3.46
52 53 4.415179 TGATGCCCATCATTAGGTTAGGAA 59.585 41.667 6.85 0.00 42.42 3.36
53 54 3.980022 TGATGCCCATCATTAGGTTAGGA 59.020 43.478 6.85 0.00 42.42 2.94
54 55 4.371624 TGATGCCCATCATTAGGTTAGG 57.628 45.455 6.85 0.00 42.42 2.69
55 56 6.322201 AGTTTTGATGCCCATCATTAGGTTAG 59.678 38.462 11.39 0.00 46.12 2.34
56 57 6.194235 AGTTTTGATGCCCATCATTAGGTTA 58.806 36.000 11.39 0.00 46.12 2.85
57 58 5.025453 AGTTTTGATGCCCATCATTAGGTT 58.975 37.500 11.39 0.00 46.12 3.50
58 59 4.613437 AGTTTTGATGCCCATCATTAGGT 58.387 39.130 11.39 0.00 46.12 3.08
59 60 5.594926 GAAGTTTTGATGCCCATCATTAGG 58.405 41.667 11.39 0.00 46.12 2.69
60 61 5.066375 TCGAAGTTTTGATGCCCATCATTAG 59.934 40.000 11.39 4.52 46.12 1.73
61 62 4.946772 TCGAAGTTTTGATGCCCATCATTA 59.053 37.500 11.39 1.52 46.12 1.90
62 63 3.763360 TCGAAGTTTTGATGCCCATCATT 59.237 39.130 11.39 3.61 46.12 2.57
63 64 3.355378 TCGAAGTTTTGATGCCCATCAT 58.645 40.909 11.39 0.00 46.12 2.45
64 65 2.789213 TCGAAGTTTTGATGCCCATCA 58.211 42.857 6.85 6.85 45.30 3.07
65 66 3.848272 TTCGAAGTTTTGATGCCCATC 57.152 42.857 0.00 1.35 38.29 3.51
66 67 4.806640 ATTTCGAAGTTTTGATGCCCAT 57.193 36.364 0.00 0.00 0.00 4.00
67 68 4.599047 AATTTCGAAGTTTTGATGCCCA 57.401 36.364 0.00 0.00 0.00 5.36
68 69 5.465935 TGTAATTTCGAAGTTTTGATGCCC 58.534 37.500 11.37 0.00 0.00 5.36
69 70 7.581011 AATGTAATTTCGAAGTTTTGATGCC 57.419 32.000 11.37 0.00 26.74 4.40
95 96 9.911788 AAAAGTGTCAGATGAGGTATAATGAAT 57.088 29.630 0.00 0.00 0.00 2.57
96 97 9.739276 AAAAAGTGTCAGATGAGGTATAATGAA 57.261 29.630 0.00 0.00 0.00 2.57
97 98 9.383519 GAAAAAGTGTCAGATGAGGTATAATGA 57.616 33.333 0.00 0.00 0.00 2.57
98 99 9.388506 AGAAAAAGTGTCAGATGAGGTATAATG 57.611 33.333 0.00 0.00 0.00 1.90
100 101 9.871238 GTAGAAAAAGTGTCAGATGAGGTATAA 57.129 33.333 0.00 0.00 0.00 0.98
101 102 8.475639 GGTAGAAAAAGTGTCAGATGAGGTATA 58.524 37.037 0.00 0.00 0.00 1.47
102 103 7.181125 AGGTAGAAAAAGTGTCAGATGAGGTAT 59.819 37.037 0.00 0.00 0.00 2.73
103 104 6.497259 AGGTAGAAAAAGTGTCAGATGAGGTA 59.503 38.462 0.00 0.00 0.00 3.08
104 105 5.308237 AGGTAGAAAAAGTGTCAGATGAGGT 59.692 40.000 0.00 0.00 0.00 3.85
105 106 5.799213 AGGTAGAAAAAGTGTCAGATGAGG 58.201 41.667 0.00 0.00 0.00 3.86
134 135 9.793252 GTCATCATGTTCATTGTTTATTTAGCT 57.207 29.630 0.00 0.00 0.00 3.32
135 136 9.571810 TGTCATCATGTTCATTGTTTATTTAGC 57.428 29.630 0.00 0.00 0.00 3.09
138 139 8.805175 TCCTGTCATCATGTTCATTGTTTATTT 58.195 29.630 0.00 0.00 0.00 1.40
139 140 8.246180 GTCCTGTCATCATGTTCATTGTTTATT 58.754 33.333 0.00 0.00 0.00 1.40
140 141 7.613022 AGTCCTGTCATCATGTTCATTGTTTAT 59.387 33.333 0.00 0.00 0.00 1.40
141 142 6.942005 AGTCCTGTCATCATGTTCATTGTTTA 59.058 34.615 0.00 0.00 0.00 2.01
142 143 5.771666 AGTCCTGTCATCATGTTCATTGTTT 59.228 36.000 0.00 0.00 0.00 2.83
143 144 5.319453 AGTCCTGTCATCATGTTCATTGTT 58.681 37.500 0.00 0.00 0.00 2.83
144 145 4.914983 AGTCCTGTCATCATGTTCATTGT 58.085 39.130 0.00 0.00 0.00 2.71
145 146 5.413523 TGAAGTCCTGTCATCATGTTCATTG 59.586 40.000 0.00 0.00 0.00 2.82
146 147 5.563592 TGAAGTCCTGTCATCATGTTCATT 58.436 37.500 0.00 0.00 0.00 2.57
147 148 5.169992 TGAAGTCCTGTCATCATGTTCAT 57.830 39.130 0.00 0.00 0.00 2.57
148 149 4.622260 TGAAGTCCTGTCATCATGTTCA 57.378 40.909 0.00 0.00 0.00 3.18
149 150 5.947228 TTTGAAGTCCTGTCATCATGTTC 57.053 39.130 0.00 0.00 0.00 3.18
150 151 8.585471 AATATTTGAAGTCCTGTCATCATGTT 57.415 30.769 0.00 0.00 0.00 2.71
151 152 8.585471 AAATATTTGAAGTCCTGTCATCATGT 57.415 30.769 0.00 0.00 0.00 3.21
152 153 9.297586 CAAAATATTTGAAGTCCTGTCATCATG 57.702 33.333 0.39 0.00 0.00 3.07
153 154 9.246670 TCAAAATATTTGAAGTCCTGTCATCAT 57.753 29.630 0.39 0.00 0.00 2.45
154 155 8.634335 TCAAAATATTTGAAGTCCTGTCATCA 57.366 30.769 0.39 0.00 0.00 3.07
155 156 8.950210 TCTCAAAATATTTGAAGTCCTGTCATC 58.050 33.333 0.39 0.00 0.00 2.92
156 157 8.868522 TCTCAAAATATTTGAAGTCCTGTCAT 57.131 30.769 0.39 0.00 0.00 3.06
157 158 8.868522 ATCTCAAAATATTTGAAGTCCTGTCA 57.131 30.769 0.39 0.00 0.00 3.58
158 159 9.780413 GAATCTCAAAATATTTGAAGTCCTGTC 57.220 33.333 0.39 0.00 0.00 3.51
159 160 8.743714 GGAATCTCAAAATATTTGAAGTCCTGT 58.256 33.333 17.31 0.00 0.00 4.00
160 161 8.964772 AGGAATCTCAAAATATTTGAAGTCCTG 58.035 33.333 21.74 4.73 35.22 3.86
161 162 9.539194 AAGGAATCTCAAAATATTTGAAGTCCT 57.461 29.630 19.37 19.37 36.54 3.85
173 174 8.080417 CGCATTCATGATAAGGAATCTCAAAAT 58.920 33.333 0.00 0.00 35.45 1.82
174 175 7.282901 TCGCATTCATGATAAGGAATCTCAAAA 59.717 33.333 0.00 0.00 35.45 2.44
175 176 6.767423 TCGCATTCATGATAAGGAATCTCAAA 59.233 34.615 0.00 0.00 35.45 2.69
176 177 6.290605 TCGCATTCATGATAAGGAATCTCAA 58.709 36.000 0.00 0.00 35.45 3.02
177 178 5.857268 TCGCATTCATGATAAGGAATCTCA 58.143 37.500 0.00 0.00 35.45 3.27
178 179 5.163874 GCTCGCATTCATGATAAGGAATCTC 60.164 44.000 0.00 0.00 35.45 2.75
179 180 4.694509 GCTCGCATTCATGATAAGGAATCT 59.305 41.667 0.00 0.00 35.45 2.40
180 181 4.694509 AGCTCGCATTCATGATAAGGAATC 59.305 41.667 0.00 0.00 31.63 2.52
181 182 4.649692 AGCTCGCATTCATGATAAGGAAT 58.350 39.130 0.00 0.00 34.19 3.01
182 183 4.077300 AGCTCGCATTCATGATAAGGAA 57.923 40.909 0.00 0.00 0.00 3.36
183 184 3.758755 AGCTCGCATTCATGATAAGGA 57.241 42.857 0.00 0.00 0.00 3.36
184 185 4.569966 GGATAGCTCGCATTCATGATAAGG 59.430 45.833 0.00 0.00 0.00 2.69
185 186 5.417811 AGGATAGCTCGCATTCATGATAAG 58.582 41.667 0.00 0.00 0.00 1.73
186 187 5.411831 AGGATAGCTCGCATTCATGATAA 57.588 39.130 0.00 0.00 0.00 1.75
187 188 5.411831 AAGGATAGCTCGCATTCATGATA 57.588 39.130 0.00 0.00 0.00 2.15
188 189 3.977134 AGGATAGCTCGCATTCATGAT 57.023 42.857 0.00 0.00 0.00 2.45
189 190 3.758755 AAGGATAGCTCGCATTCATGA 57.241 42.857 0.00 0.00 0.00 3.07
190 191 4.934001 ACATAAGGATAGCTCGCATTCATG 59.066 41.667 0.00 0.00 0.00 3.07
191 192 5.157940 ACATAAGGATAGCTCGCATTCAT 57.842 39.130 0.00 0.00 0.00 2.57
192 193 4.607293 ACATAAGGATAGCTCGCATTCA 57.393 40.909 0.00 0.00 0.00 2.57
193 194 5.931441 AAACATAAGGATAGCTCGCATTC 57.069 39.130 0.00 0.00 0.00 2.67
194 195 6.543831 AGAAAAACATAAGGATAGCTCGCATT 59.456 34.615 0.00 0.00 0.00 3.56
195 196 6.058183 AGAAAAACATAAGGATAGCTCGCAT 58.942 36.000 0.00 0.00 0.00 4.73
196 197 5.428253 AGAAAAACATAAGGATAGCTCGCA 58.572 37.500 0.00 0.00 0.00 5.10
197 198 5.993106 AGAAAAACATAAGGATAGCTCGC 57.007 39.130 0.00 0.00 0.00 5.03
198 199 7.308782 ACAAGAAAAACATAAGGATAGCTCG 57.691 36.000 0.00 0.00 0.00 5.03
200 201 9.905713 TGATACAAGAAAAACATAAGGATAGCT 57.094 29.630 0.00 0.00 0.00 3.32
208 209 9.770097 TGCCAAATTGATACAAGAAAAACATAA 57.230 25.926 0.00 0.00 0.00 1.90
209 210 9.421806 CTGCCAAATTGATACAAGAAAAACATA 57.578 29.630 0.00 0.00 0.00 2.29
210 211 7.933033 ACTGCCAAATTGATACAAGAAAAACAT 59.067 29.630 0.00 0.00 0.00 2.71
211 212 7.271511 ACTGCCAAATTGATACAAGAAAAACA 58.728 30.769 0.00 0.00 0.00 2.83
212 213 7.653311 AGACTGCCAAATTGATACAAGAAAAAC 59.347 33.333 0.00 0.00 0.00 2.43
213 214 7.725251 AGACTGCCAAATTGATACAAGAAAAA 58.275 30.769 0.00 0.00 0.00 1.94
214 215 7.288810 AGACTGCCAAATTGATACAAGAAAA 57.711 32.000 0.00 0.00 0.00 2.29
215 216 6.899393 AGACTGCCAAATTGATACAAGAAA 57.101 33.333 0.00 0.00 0.00 2.52
216 217 8.579850 AATAGACTGCCAAATTGATACAAGAA 57.420 30.769 0.00 0.00 0.00 2.52
217 218 8.579850 AAATAGACTGCCAAATTGATACAAGA 57.420 30.769 0.00 0.00 0.00 3.02
220 221 8.394877 CGTAAAATAGACTGCCAAATTGATACA 58.605 33.333 0.00 0.00 0.00 2.29
221 222 8.609176 TCGTAAAATAGACTGCCAAATTGATAC 58.391 33.333 0.00 0.00 0.00 2.24
222 223 8.725405 TCGTAAAATAGACTGCCAAATTGATA 57.275 30.769 0.00 0.00 0.00 2.15
223 224 7.624360 TCGTAAAATAGACTGCCAAATTGAT 57.376 32.000 0.00 0.00 0.00 2.57
224 225 7.174253 ACTTCGTAAAATAGACTGCCAAATTGA 59.826 33.333 0.00 0.00 0.00 2.57
225 226 7.305474 ACTTCGTAAAATAGACTGCCAAATTG 58.695 34.615 0.00 0.00 0.00 2.32
226 227 7.448748 ACTTCGTAAAATAGACTGCCAAATT 57.551 32.000 0.00 0.00 0.00 1.82
227 228 8.448615 GTTACTTCGTAAAATAGACTGCCAAAT 58.551 33.333 0.00 0.00 29.42 2.32
228 229 7.658575 AGTTACTTCGTAAAATAGACTGCCAAA 59.341 33.333 0.00 0.00 29.42 3.28
229 230 7.156673 AGTTACTTCGTAAAATAGACTGCCAA 58.843 34.615 0.00 0.00 29.42 4.52
230 231 6.694447 AGTTACTTCGTAAAATAGACTGCCA 58.306 36.000 0.00 0.00 29.42 4.92
231 232 7.453838 CAAGTTACTTCGTAAAATAGACTGCC 58.546 38.462 0.00 0.00 29.42 4.85
232 233 6.954297 GCAAGTTACTTCGTAAAATAGACTGC 59.046 38.462 0.00 0.00 29.42 4.40
233 234 8.014322 TGCAAGTTACTTCGTAAAATAGACTG 57.986 34.615 0.00 0.00 29.42 3.51
234 235 8.597662 TTGCAAGTTACTTCGTAAAATAGACT 57.402 30.769 0.00 0.00 29.42 3.24
238 239 9.710979 GCATATTGCAAGTTACTTCGTAAAATA 57.289 29.630 4.94 0.00 44.26 1.40
239 240 8.614994 GCATATTGCAAGTTACTTCGTAAAAT 57.385 30.769 4.94 0.00 44.26 1.82
256 257 3.251972 GGGCACTTAGAGAAGCATATTGC 59.748 47.826 0.00 0.00 45.46 3.56
257 258 4.514441 CAGGGCACTTAGAGAAGCATATTG 59.486 45.833 0.00 0.00 35.97 1.90
258 259 4.410228 TCAGGGCACTTAGAGAAGCATATT 59.590 41.667 0.00 0.00 35.97 1.28
259 260 3.969976 TCAGGGCACTTAGAGAAGCATAT 59.030 43.478 0.00 0.00 35.97 1.78
260 261 3.374764 TCAGGGCACTTAGAGAAGCATA 58.625 45.455 0.00 0.00 35.97 3.14
261 262 2.170187 CTCAGGGCACTTAGAGAAGCAT 59.830 50.000 0.00 0.00 35.97 3.79
262 263 1.552337 CTCAGGGCACTTAGAGAAGCA 59.448 52.381 0.00 0.00 35.97 3.91
263 264 1.827969 TCTCAGGGCACTTAGAGAAGC 59.172 52.381 3.59 0.00 35.97 3.86
265 266 3.511934 GTCTTCTCAGGGCACTTAGAGAA 59.488 47.826 15.76 15.76 42.85 2.87
266 267 3.093057 GTCTTCTCAGGGCACTTAGAGA 58.907 50.000 1.94 1.94 35.49 3.10
267 268 3.096092 AGTCTTCTCAGGGCACTTAGAG 58.904 50.000 0.00 0.00 29.26 2.43
268 269 3.176924 AGTCTTCTCAGGGCACTTAGA 57.823 47.619 0.00 0.00 0.00 2.10
269 270 3.368948 GGAAGTCTTCTCAGGGCACTTAG 60.369 52.174 12.31 0.00 0.00 2.18
270 271 2.567615 GGAAGTCTTCTCAGGGCACTTA 59.432 50.000 12.31 0.00 0.00 2.24
271 272 1.349357 GGAAGTCTTCTCAGGGCACTT 59.651 52.381 12.31 0.00 0.00 3.16
272 273 0.980423 GGAAGTCTTCTCAGGGCACT 59.020 55.000 12.31 0.00 0.00 4.40
273 274 0.687354 TGGAAGTCTTCTCAGGGCAC 59.313 55.000 12.31 0.00 0.00 5.01
274 275 0.687354 GTGGAAGTCTTCTCAGGGCA 59.313 55.000 12.31 0.00 0.00 5.36
275 276 0.980423 AGTGGAAGTCTTCTCAGGGC 59.020 55.000 12.31 0.00 0.00 5.19
276 277 2.634940 TCAAGTGGAAGTCTTCTCAGGG 59.365 50.000 12.31 1.08 0.00 4.45
277 278 4.502962 GATCAAGTGGAAGTCTTCTCAGG 58.497 47.826 12.31 0.12 0.00 3.86
278 279 4.222588 AGGATCAAGTGGAAGTCTTCTCAG 59.777 45.833 12.31 4.29 0.00 3.35
279 280 4.020751 CAGGATCAAGTGGAAGTCTTCTCA 60.021 45.833 12.31 6.17 0.00 3.27
280 281 4.502962 CAGGATCAAGTGGAAGTCTTCTC 58.497 47.826 12.31 6.42 0.00 2.87
281 282 3.262915 CCAGGATCAAGTGGAAGTCTTCT 59.737 47.826 12.31 0.00 35.67 2.85
282 283 3.008485 ACCAGGATCAAGTGGAAGTCTTC 59.992 47.826 13.43 3.80 37.27 2.87
283 284 2.982488 ACCAGGATCAAGTGGAAGTCTT 59.018 45.455 13.43 0.00 37.27 3.01
284 285 2.625639 ACCAGGATCAAGTGGAAGTCT 58.374 47.619 13.43 0.00 37.27 3.24
285 286 4.553330 TTACCAGGATCAAGTGGAAGTC 57.447 45.455 13.43 0.00 37.27 3.01
286 287 4.080299 GGATTACCAGGATCAAGTGGAAGT 60.080 45.833 13.43 1.01 37.27 3.01
287 288 4.080356 TGGATTACCAGGATCAAGTGGAAG 60.080 45.833 13.43 0.00 41.77 3.46
288 289 3.849574 TGGATTACCAGGATCAAGTGGAA 59.150 43.478 13.43 5.57 41.77 3.53
289 290 3.459828 TGGATTACCAGGATCAAGTGGA 58.540 45.455 13.43 0.00 41.77 4.02
290 291 3.931907 TGGATTACCAGGATCAAGTGG 57.068 47.619 0.00 6.47 41.77 4.00
301 302 3.084536 TGCAGAAATGCTGGATTACCA 57.915 42.857 1.53 0.00 45.03 3.25
307 308 0.674581 CTCGGTGCAGAAATGCTGGA 60.675 55.000 1.53 0.00 45.03 3.86
308 309 1.798735 CTCGGTGCAGAAATGCTGG 59.201 57.895 1.53 0.00 45.03 4.85
310 311 1.002868 AGCTCGGTGCAGAAATGCT 60.003 52.632 4.74 0.00 45.94 3.79
311 312 1.136147 CAGCTCGGTGCAGAAATGC 59.864 57.895 4.74 0.00 45.94 3.56
312 313 0.445436 GACAGCTCGGTGCAGAAATG 59.555 55.000 4.74 0.00 45.94 2.32
313 314 0.674895 GGACAGCTCGGTGCAGAAAT 60.675 55.000 4.74 0.00 45.94 2.17
314 315 1.301716 GGACAGCTCGGTGCAGAAA 60.302 57.895 4.74 0.00 45.94 2.52
315 316 2.038814 TTGGACAGCTCGGTGCAGAA 62.039 55.000 4.74 0.00 45.94 3.02
316 317 2.440385 CTTGGACAGCTCGGTGCAGA 62.440 60.000 4.74 0.00 45.94 4.26
317 318 2.031012 TTGGACAGCTCGGTGCAG 59.969 61.111 4.74 0.00 45.94 4.41
318 319 2.031012 CTTGGACAGCTCGGTGCA 59.969 61.111 4.74 0.00 45.94 4.57
319 320 2.743928 CCTTGGACAGCTCGGTGC 60.744 66.667 0.00 0.00 43.29 5.01
320 321 2.046892 CCCTTGGACAGCTCGGTG 60.047 66.667 0.00 0.00 0.00 4.94
321 322 2.526873 ACCCTTGGACAGCTCGGT 60.527 61.111 0.00 0.00 0.00 4.69
322 323 2.046892 CACCCTTGGACAGCTCGG 60.047 66.667 0.00 0.00 0.00 4.63
323 324 1.079543 CTCACCCTTGGACAGCTCG 60.080 63.158 0.00 0.00 0.00 5.03
324 325 1.267121 TACTCACCCTTGGACAGCTC 58.733 55.000 0.00 0.00 0.00 4.09
325 326 1.348036 GTTACTCACCCTTGGACAGCT 59.652 52.381 0.00 0.00 0.00 4.24
326 327 1.348036 AGTTACTCACCCTTGGACAGC 59.652 52.381 0.00 0.00 0.00 4.40
327 328 3.771577 AAGTTACTCACCCTTGGACAG 57.228 47.619 0.00 0.00 0.00 3.51
328 329 5.836024 ATAAAGTTACTCACCCTTGGACA 57.164 39.130 0.00 0.00 0.00 4.02
329 330 6.002082 ACAATAAAGTTACTCACCCTTGGAC 58.998 40.000 0.00 0.00 0.00 4.02
330 331 6.043938 AGACAATAAAGTTACTCACCCTTGGA 59.956 38.462 0.00 0.00 0.00 3.53
331 332 6.238648 AGACAATAAAGTTACTCACCCTTGG 58.761 40.000 0.00 0.00 0.00 3.61
332 333 7.118390 CAGAGACAATAAAGTTACTCACCCTTG 59.882 40.741 0.00 0.00 0.00 3.61
333 334 7.162082 CAGAGACAATAAAGTTACTCACCCTT 58.838 38.462 0.00 0.00 0.00 3.95
334 335 6.295916 CCAGAGACAATAAAGTTACTCACCCT 60.296 42.308 0.00 0.00 0.00 4.34
335 336 5.875359 CCAGAGACAATAAAGTTACTCACCC 59.125 44.000 0.00 0.00 0.00 4.61
336 337 5.875359 CCCAGAGACAATAAAGTTACTCACC 59.125 44.000 0.00 0.00 0.00 4.02
337 338 6.698380 TCCCAGAGACAATAAAGTTACTCAC 58.302 40.000 0.00 0.00 0.00 3.51
338 339 6.928348 TCCCAGAGACAATAAAGTTACTCA 57.072 37.500 0.00 0.00 0.00 3.41
339 340 7.612677 TCTTCCCAGAGACAATAAAGTTACTC 58.387 38.462 0.00 0.00 0.00 2.59
340 341 7.554959 TCTTCCCAGAGACAATAAAGTTACT 57.445 36.000 0.00 0.00 0.00 2.24
341 342 9.886132 TTATCTTCCCAGAGACAATAAAGTTAC 57.114 33.333 0.00 0.00 30.36 2.50
343 344 9.981460 ATTTATCTTCCCAGAGACAATAAAGTT 57.019 29.630 0.00 0.00 30.42 2.66
344 345 9.981460 AATTTATCTTCCCAGAGACAATAAAGT 57.019 29.630 0.00 0.00 30.42 2.66
377 378 9.504708 TGCAAAAATGAATACAAGATGGAAAAT 57.495 25.926 0.00 0.00 0.00 1.82
378 379 8.772705 GTGCAAAAATGAATACAAGATGGAAAA 58.227 29.630 0.00 0.00 0.00 2.29
379 380 7.387397 GGTGCAAAAATGAATACAAGATGGAAA 59.613 33.333 0.00 0.00 0.00 3.13
380 381 6.873076 GGTGCAAAAATGAATACAAGATGGAA 59.127 34.615 0.00 0.00 0.00 3.53
381 382 6.211184 AGGTGCAAAAATGAATACAAGATGGA 59.789 34.615 0.00 0.00 0.00 3.41
382 383 6.311935 CAGGTGCAAAAATGAATACAAGATGG 59.688 38.462 0.00 0.00 0.00 3.51
383 384 6.869913 ACAGGTGCAAAAATGAATACAAGATG 59.130 34.615 0.00 0.00 0.00 2.90
384 385 6.996509 ACAGGTGCAAAAATGAATACAAGAT 58.003 32.000 0.00 0.00 0.00 2.40
385 386 6.403866 ACAGGTGCAAAAATGAATACAAGA 57.596 33.333 0.00 0.00 0.00 3.02
386 387 7.481275 AAACAGGTGCAAAAATGAATACAAG 57.519 32.000 0.00 0.00 0.00 3.16
387 388 7.856145 AAAACAGGTGCAAAAATGAATACAA 57.144 28.000 0.00 0.00 0.00 2.41
388 389 7.856145 AAAAACAGGTGCAAAAATGAATACA 57.144 28.000 0.00 0.00 0.00 2.29
391 392 8.567104 GGAATAAAAACAGGTGCAAAAATGAAT 58.433 29.630 0.00 0.00 0.00 2.57
392 393 7.554118 TGGAATAAAAACAGGTGCAAAAATGAA 59.446 29.630 0.00 0.00 0.00 2.57
393 394 7.050377 TGGAATAAAAACAGGTGCAAAAATGA 58.950 30.769 0.00 0.00 0.00 2.57
394 395 7.256756 TGGAATAAAAACAGGTGCAAAAATG 57.743 32.000 0.00 0.00 0.00 2.32
395 396 7.718753 TCATGGAATAAAAACAGGTGCAAAAAT 59.281 29.630 0.00 0.00 0.00 1.82
396 397 7.050377 TCATGGAATAAAAACAGGTGCAAAAA 58.950 30.769 0.00 0.00 0.00 1.94
397 398 6.586344 TCATGGAATAAAAACAGGTGCAAAA 58.414 32.000 0.00 0.00 0.00 2.44
398 399 6.166984 TCATGGAATAAAAACAGGTGCAAA 57.833 33.333 0.00 0.00 0.00 3.68
399 400 5.304101 ACTCATGGAATAAAAACAGGTGCAA 59.696 36.000 0.00 0.00 0.00 4.08
400 401 4.832266 ACTCATGGAATAAAAACAGGTGCA 59.168 37.500 0.00 0.00 0.00 4.57
401 402 5.391312 ACTCATGGAATAAAAACAGGTGC 57.609 39.130 0.00 0.00 0.00 5.01
402 403 6.389906 GGAACTCATGGAATAAAAACAGGTG 58.610 40.000 0.00 0.00 0.00 4.00
403 404 5.480422 GGGAACTCATGGAATAAAAACAGGT 59.520 40.000 0.00 0.00 0.00 4.00
404 405 5.480073 TGGGAACTCATGGAATAAAAACAGG 59.520 40.000 0.00 0.00 0.00 4.00
405 406 6.588719 TGGGAACTCATGGAATAAAAACAG 57.411 37.500 0.00 0.00 0.00 3.16
406 407 6.780031 TCTTGGGAACTCATGGAATAAAAACA 59.220 34.615 0.00 0.00 0.00 2.83
407 408 7.227049 TCTTGGGAACTCATGGAATAAAAAC 57.773 36.000 0.00 0.00 0.00 2.43
408 409 6.437162 CCTCTTGGGAACTCATGGAATAAAAA 59.563 38.462 0.00 0.00 37.23 1.94
409 410 5.951747 CCTCTTGGGAACTCATGGAATAAAA 59.048 40.000 0.00 0.00 37.23 1.52
410 411 5.015178 ACCTCTTGGGAACTCATGGAATAAA 59.985 40.000 0.00 0.00 38.76 1.40
411 412 4.540099 ACCTCTTGGGAACTCATGGAATAA 59.460 41.667 0.00 0.00 38.76 1.40
412 413 4.111577 ACCTCTTGGGAACTCATGGAATA 58.888 43.478 0.00 0.00 38.76 1.75
413 414 2.922283 ACCTCTTGGGAACTCATGGAAT 59.078 45.455 0.00 0.00 38.76 3.01
414 415 2.348472 ACCTCTTGGGAACTCATGGAA 58.652 47.619 0.00 0.00 38.76 3.53
415 416 2.044793 ACCTCTTGGGAACTCATGGA 57.955 50.000 0.00 0.00 38.76 3.41
416 417 2.821969 CAAACCTCTTGGGAACTCATGG 59.178 50.000 0.00 0.00 38.76 3.66
417 418 3.754965 TCAAACCTCTTGGGAACTCATG 58.245 45.455 0.00 0.00 38.76 3.07
418 419 4.043310 TCATCAAACCTCTTGGGAACTCAT 59.957 41.667 0.00 0.00 38.76 2.90
419 420 3.394274 TCATCAAACCTCTTGGGAACTCA 59.606 43.478 0.00 0.00 38.76 3.41
420 421 4.006319 CTCATCAAACCTCTTGGGAACTC 58.994 47.826 0.00 0.00 38.76 3.01
421 422 3.245052 CCTCATCAAACCTCTTGGGAACT 60.245 47.826 0.00 0.00 38.76 3.01
422 423 3.084786 CCTCATCAAACCTCTTGGGAAC 58.915 50.000 0.00 0.00 38.76 3.62
423 424 2.986019 TCCTCATCAAACCTCTTGGGAA 59.014 45.455 0.00 0.00 38.76 3.97
424 425 2.631384 TCCTCATCAAACCTCTTGGGA 58.369 47.619 0.00 0.00 38.76 4.37
425 426 3.084786 GTTCCTCATCAAACCTCTTGGG 58.915 50.000 0.00 0.00 41.89 4.12
426 427 3.754965 TGTTCCTCATCAAACCTCTTGG 58.245 45.455 0.00 0.00 39.83 3.61
427 428 5.972107 ATTGTTCCTCATCAAACCTCTTG 57.028 39.130 0.00 0.00 0.00 3.02
428 429 7.020827 TCTATTGTTCCTCATCAAACCTCTT 57.979 36.000 0.00 0.00 0.00 2.85
429 430 6.627087 TCTATTGTTCCTCATCAAACCTCT 57.373 37.500 0.00 0.00 0.00 3.69
430 431 7.050377 TCATCTATTGTTCCTCATCAAACCTC 58.950 38.462 0.00 0.00 0.00 3.85
431 432 6.962182 TCATCTATTGTTCCTCATCAAACCT 58.038 36.000 0.00 0.00 0.00 3.50
432 433 6.261826 CCTCATCTATTGTTCCTCATCAAACC 59.738 42.308 0.00 0.00 0.00 3.27
433 434 7.050377 TCCTCATCTATTGTTCCTCATCAAAC 58.950 38.462 0.00 0.00 0.00 2.93
759 763 2.254152 ACTCCTAGGGCACAAGATCA 57.746 50.000 9.46 0.00 0.00 2.92
977 982 3.497932 GCTGCAGCTTGCTCTCGG 61.498 66.667 31.33 0.00 45.31 4.63
1017 1022 1.005097 TGTTCTGCTGCATCCATCCTT 59.995 47.619 1.31 0.00 0.00 3.36
1029 1034 4.340381 AGCTCTTTGATTTGTTGTTCTGCT 59.660 37.500 0.00 0.00 0.00 4.24
1115 1120 7.753630 AGATGAATCTCCTTTATTGGTAGCAT 58.246 34.615 0.00 0.00 29.30 3.79
1126 1131 8.386012 TCTTCTCCTTTAGATGAATCTCCTTT 57.614 34.615 0.00 0.00 35.92 3.11
1145 1150 7.102346 TCTCCTTTGATGAACATCTTCTTCTC 58.898 38.462 14.50 0.00 38.60 2.87
1297 1311 1.196766 GGGTTGGGTACTCTCCGGTT 61.197 60.000 0.00 0.00 0.00 4.44
1299 1313 0.032813 TAGGGTTGGGTACTCTCCGG 60.033 60.000 0.00 0.00 38.87 5.14
1413 1427 4.594920 TCCATGACCTCAAAGAAAGTCTCT 59.405 41.667 0.00 0.00 35.13 3.10
1442 1456 4.081642 CCAAAGGAACTCTACGATCTTCCA 60.082 45.833 10.74 0.00 38.49 3.53
1559 1573 5.453762 CCTTTCAAGAGGCCTTTCATTTGTT 60.454 40.000 6.77 0.00 0.00 2.83
1624 1638 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94
1625 1639 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27
1626 1640 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
1627 1641 1.909781 CATGCACCAGGTTGCCCTT 60.910 57.895 10.46 0.00 42.25 3.95
1628 1642 1.788518 TACATGCACCAGGTTGCCCT 61.789 55.000 10.46 0.00 42.25 5.19
1629 1643 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
1630 1644 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
1631 1645 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
1632 1646 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
1633 1647 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
1655 1669 2.463589 TTACCTGGACCCTGCGCAAG 62.464 60.000 13.05 4.91 43.44 4.01
1656 1670 2.463589 CTTACCTGGACCCTGCGCAA 62.464 60.000 13.05 0.00 0.00 4.85
1657 1671 2.925706 TTACCTGGACCCTGCGCA 60.926 61.111 10.98 10.98 0.00 6.09
1658 1672 2.125106 CTTACCTGGACCCTGCGC 60.125 66.667 0.00 0.00 0.00 6.09
1659 1673 2.584608 CCTTACCTGGACCCTGCG 59.415 66.667 0.00 0.00 0.00 5.18
1660 1674 1.911702 GACCCTTACCTGGACCCTGC 61.912 65.000 0.00 0.00 0.00 4.85
1661 1675 1.272554 GGACCCTTACCTGGACCCTG 61.273 65.000 0.00 0.00 0.00 4.45
1662 1676 1.082392 GGACCCTTACCTGGACCCT 59.918 63.158 0.00 0.00 0.00 4.34
1663 1677 2.364780 CGGACCCTTACCTGGACCC 61.365 68.421 0.00 0.00 0.00 4.46
1664 1678 1.305549 TCGGACCCTTACCTGGACC 60.306 63.158 0.00 0.00 0.00 4.46
1665 1679 1.611474 GGTCGGACCCTTACCTGGAC 61.611 65.000 16.55 0.00 30.04 4.02
1666 1680 1.305549 GGTCGGACCCTTACCTGGA 60.306 63.158 16.55 0.00 30.04 3.86
1667 1681 1.611261 TGGTCGGACCCTTACCTGG 60.611 63.158 23.81 0.00 37.50 4.45
1668 1682 0.903454 AGTGGTCGGACCCTTACCTG 60.903 60.000 23.81 0.00 37.50 4.00
1669 1683 0.178912 AAGTGGTCGGACCCTTACCT 60.179 55.000 23.81 9.20 37.50 3.08
1670 1684 0.689055 AAAGTGGTCGGACCCTTACC 59.311 55.000 23.81 7.17 37.50 2.85
1671 1685 1.609841 CCAAAGTGGTCGGACCCTTAC 60.610 57.143 23.81 15.33 37.50 2.34
1672 1686 0.688487 CCAAAGTGGTCGGACCCTTA 59.312 55.000 23.81 2.97 37.50 2.69
1673 1687 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
1674 1688 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
1675 1689 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
1676 1690 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
1677 1691 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
1682 1696 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
1683 1697 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
1684 1698 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
1685 1699 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
1686 1700 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
1687 1701 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
1688 1702 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
1689 1703 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
1690 1704 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
1691 1705 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
1692 1706 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
1693 1707 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
1694 1708 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
1695 1709 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
1696 1710 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
1697 1711 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
1698 1712 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
1699 1713 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
1700 1714 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
1701 1715 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
1702 1716 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
1703 1717 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
1704 1718 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
1705 1719 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
1706 1720 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
1707 1721 5.586643 GCTCTTACAGAAATGTAGGGAAAGG 59.413 44.000 0.00 0.00 0.00 3.11
1708 1722 5.586643 GGCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
1709 1723 5.250774 AGGCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
1710 1724 4.783227 AGGCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
1711 1725 4.162320 CAGGCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
1712 1726 4.162320 TCAGGCTCTTACAGAAATGTAGGG 59.838 45.833 0.00 0.00 0.00 3.53
1713 1727 5.112686 GTCAGGCTCTTACAGAAATGTAGG 58.887 45.833 0.00 0.00 0.00 3.18
1714 1728 5.112686 GGTCAGGCTCTTACAGAAATGTAG 58.887 45.833 0.00 0.00 0.00 2.74
1715 1729 4.530553 TGGTCAGGCTCTTACAGAAATGTA 59.469 41.667 0.00 0.00 0.00 2.29
1716 1730 3.327757 TGGTCAGGCTCTTACAGAAATGT 59.672 43.478 0.00 0.00 0.00 2.71
1717 1731 3.937706 CTGGTCAGGCTCTTACAGAAATG 59.062 47.826 0.00 0.00 0.00 2.32
1718 1732 3.840666 TCTGGTCAGGCTCTTACAGAAAT 59.159 43.478 5.54 0.00 32.60 2.17
1719 1733 3.239449 TCTGGTCAGGCTCTTACAGAAA 58.761 45.455 5.54 0.00 32.60 2.52
1720 1734 2.889512 TCTGGTCAGGCTCTTACAGAA 58.110 47.619 5.54 0.00 32.60 3.02
1721 1735 2.604912 TCTGGTCAGGCTCTTACAGA 57.395 50.000 4.24 4.24 33.05 3.41
1722 1736 2.102252 GGATCTGGTCAGGCTCTTACAG 59.898 54.545 0.00 0.00 0.00 2.74
1723 1737 2.111384 GGATCTGGTCAGGCTCTTACA 58.889 52.381 0.00 0.00 0.00 2.41
1724 1738 2.393646 AGGATCTGGTCAGGCTCTTAC 58.606 52.381 0.00 0.00 0.00 2.34
1725 1739 2.856760 AGGATCTGGTCAGGCTCTTA 57.143 50.000 0.00 0.00 0.00 2.10
1726 1740 2.856760 TAGGATCTGGTCAGGCTCTT 57.143 50.000 0.00 0.00 0.00 2.85
1727 1741 3.342926 AATAGGATCTGGTCAGGCTCT 57.657 47.619 0.00 0.00 0.00 4.09
1728 1742 5.337975 GGATAAATAGGATCTGGTCAGGCTC 60.338 48.000 0.00 0.00 0.00 4.70
1729 1743 4.534103 GGATAAATAGGATCTGGTCAGGCT 59.466 45.833 0.00 0.00 0.00 4.58
1730 1744 4.287067 TGGATAAATAGGATCTGGTCAGGC 59.713 45.833 0.00 0.00 0.00 4.85
1731 1745 6.439636 TTGGATAAATAGGATCTGGTCAGG 57.560 41.667 0.00 0.00 0.00 3.86
1732 1746 8.930846 AAATTGGATAAATAGGATCTGGTCAG 57.069 34.615 0.00 0.00 0.00 3.51
2011 2025 3.057174 CCTAGATGAGCCTTCGGTATGAC 60.057 52.174 0.00 0.00 0.00 3.06
2036 2050 7.394816 CCTTTTCTTCCACTCTATTAGGTTGA 58.605 38.462 0.00 0.00 0.00 3.18
2061 2075 1.398692 TTTGTCTTTGGTGGAGTGGC 58.601 50.000 0.00 0.00 0.00 5.01
2096 2110 3.009143 CCTTACCCTTGCCTCTAGTTTGT 59.991 47.826 0.00 0.00 0.00 2.83
2238 2252 7.837863 TCTTGTCCGTCTACATCTTTAGATTT 58.162 34.615 0.00 0.00 30.73 2.17
2244 2258 3.833070 ACCTCTTGTCCGTCTACATCTTT 59.167 43.478 0.00 0.00 0.00 2.52
2282 2296 3.448686 GATCACACATACCACCTCTTCG 58.551 50.000 0.00 0.00 0.00 3.79
2366 2380 0.243365 TGCCATTCACCGTGCATTTC 59.757 50.000 0.00 0.00 0.00 2.17
2397 2411 5.563842 GCAGTTGCAACTATCAATCACTAC 58.436 41.667 30.67 0.00 41.59 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.