Multiple sequence alignment - TraesCS4A01G086700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G086700 chr4A 100.000 9356 0 0 1 9356 90877561 90886916 0.000000e+00 17278
1 TraesCS4A01G086700 chr4A 99.080 5327 46 3 2380 7705 16029668 16024344 0.000000e+00 9563
2 TraesCS4A01G086700 chr4A 99.060 5320 47 3 2380 7698 24088988 24094305 0.000000e+00 9544
3 TraesCS4A01G086700 chr4A 82.838 1311 208 10 1082 2377 511825975 511824667 0.000000e+00 1158
4 TraesCS4A01G086700 chr6B 99.135 5319 44 2 2380 7697 118857239 118851922 0.000000e+00 9566
5 TraesCS4A01G086700 chr6B 99.042 5322 48 3 2380 7700 164605042 164599723 0.000000e+00 9542
6 TraesCS4A01G086700 chr2B 99.117 5320 45 2 2380 7698 244492584 244497902 0.000000e+00 9563
7 TraesCS4A01G086700 chr5A 99.043 5328 46 3 2380 7706 482433226 482438549 0.000000e+00 9551
8 TraesCS4A01G086700 chr2A 99.079 5319 47 2 2380 7697 230835331 230830014 0.000000e+00 9550
9 TraesCS4A01G086700 chr1B 99.005 5328 51 2 2380 7706 500583687 500578361 0.000000e+00 9544
10 TraesCS4A01G086700 chr4B 98.987 5331 51 3 2372 7700 401872682 401878011 0.000000e+00 9542
11 TraesCS4A01G086700 chr4B 95.349 1333 60 2 1046 2377 459075731 459074400 0.000000e+00 2117
12 TraesCS4A01G086700 chr4B 91.206 1194 73 16 7694 8884 459074407 459073243 0.000000e+00 1594
13 TraesCS4A01G086700 chr4B 91.525 472 29 5 8889 9356 459073207 459072743 2.850000e-179 640
14 TraesCS4A01G086700 chr4B 83.915 659 98 6 1082 1736 107799814 107799160 2.870000e-174 623
15 TraesCS4A01G086700 chr4B 80.750 613 102 6 1769 2377 107799169 107798569 1.840000e-126 464
16 TraesCS4A01G086700 chr4D 89.559 1293 126 7 1082 2368 373636690 373637979 0.000000e+00 1631
17 TraesCS4A01G086700 chr4D 83.755 1305 200 10 1082 2377 75554794 75553493 0.000000e+00 1225
18 TraesCS4A01G086700 chr4D 94.710 397 21 0 8960 9356 373640071 373640467 1.330000e-172 617
19 TraesCS4A01G086700 chr4D 80.335 656 123 6 7698 8350 373638085 373638737 8.440000e-135 492
20 TraesCS4A01G086700 chr5D 87.043 301 12 9 9043 9334 486916069 486915787 1.960000e-81 315


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G086700 chr4A 90877561 90886916 9355 False 17278.000000 17278 100.000000 1 9356 1 chr4A.!!$F2 9355
1 TraesCS4A01G086700 chr4A 16024344 16029668 5324 True 9563.000000 9563 99.080000 2380 7705 1 chr4A.!!$R1 5325
2 TraesCS4A01G086700 chr4A 24088988 24094305 5317 False 9544.000000 9544 99.060000 2380 7698 1 chr4A.!!$F1 5318
3 TraesCS4A01G086700 chr4A 511824667 511825975 1308 True 1158.000000 1158 82.838000 1082 2377 1 chr4A.!!$R2 1295
4 TraesCS4A01G086700 chr6B 118851922 118857239 5317 True 9566.000000 9566 99.135000 2380 7697 1 chr6B.!!$R1 5317
5 TraesCS4A01G086700 chr6B 164599723 164605042 5319 True 9542.000000 9542 99.042000 2380 7700 1 chr6B.!!$R2 5320
6 TraesCS4A01G086700 chr2B 244492584 244497902 5318 False 9563.000000 9563 99.117000 2380 7698 1 chr2B.!!$F1 5318
7 TraesCS4A01G086700 chr5A 482433226 482438549 5323 False 9551.000000 9551 99.043000 2380 7706 1 chr5A.!!$F1 5326
8 TraesCS4A01G086700 chr2A 230830014 230835331 5317 True 9550.000000 9550 99.079000 2380 7697 1 chr2A.!!$R1 5317
9 TraesCS4A01G086700 chr1B 500578361 500583687 5326 True 9544.000000 9544 99.005000 2380 7706 1 chr1B.!!$R1 5326
10 TraesCS4A01G086700 chr4B 401872682 401878011 5329 False 9542.000000 9542 98.987000 2372 7700 1 chr4B.!!$F1 5328
11 TraesCS4A01G086700 chr4B 459072743 459075731 2988 True 1450.333333 2117 92.693333 1046 9356 3 chr4B.!!$R2 8310
12 TraesCS4A01G086700 chr4B 107798569 107799814 1245 True 543.500000 623 82.332500 1082 2377 2 chr4B.!!$R1 1295
13 TraesCS4A01G086700 chr4D 75553493 75554794 1301 True 1225.000000 1225 83.755000 1082 2377 1 chr4D.!!$R1 1295
14 TraesCS4A01G086700 chr4D 373636690 373640467 3777 False 913.333333 1631 88.201333 1082 9356 3 chr4D.!!$F1 8274

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
715 716 0.036010 AACCTGGCTGTGAAGATCCG 60.036 55.000 0.00 0.00 0.00 4.18 F
1007 1008 0.031857 CTAGCTCCAGACATGCCGAG 59.968 60.000 0.00 0.00 0.00 4.63 F
1851 1856 0.033011 AGACCTATGACCAGGCTCGT 60.033 55.000 0.00 0.00 39.53 4.18 F
2484 2500 1.073923 CCTAGAGGGTTGTGCTGGTTT 59.926 52.381 0.00 0.00 0.00 3.27 F
2725 2741 2.182030 CTCTGTTCCGGCTCCGAC 59.818 66.667 10.28 1.51 42.83 4.79 F
3413 3430 1.211969 GCACTCCGTCGTCAGCTTA 59.788 57.895 0.00 0.00 0.00 3.09 F
3863 3881 1.282157 GGGCCTCCAAGTGTCATAAGT 59.718 52.381 0.84 0.00 0.00 2.24 F
6134 6152 1.555992 CTCCACCACCACGGGTAAATA 59.444 52.381 0.00 0.00 39.79 1.40 F
7830 7848 0.106335 AGATGCTGATGGAGAAGGCG 59.894 55.000 0.00 0.00 0.00 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1827 1832 1.033574 CCTGGTCATAGGTCTCGTCC 58.966 60.000 0.00 0.0 32.99 4.79 R
1982 1987 1.267235 CGTTGATCTGCTTGACGATGC 60.267 52.381 0.00 0.0 35.90 3.91 R
2725 2741 2.202932 CGATGCTCCTTGTCCCGG 60.203 66.667 0.00 0.0 0.00 5.73 R
3413 3430 3.230134 AGTCAAGCTTCTGACACTCTCT 58.770 45.455 18.40 0.0 46.81 3.10 R
4546 4564 0.110678 TCACCTCACGACTGGACTCT 59.889 55.000 0.00 0.0 0.00 3.24 R
6203 6221 1.092921 AAACCGCGAGCAACAAGTCA 61.093 50.000 8.23 0.0 0.00 3.41 R
6438 6456 7.615365 TCAAACCATATAGTGCTTTGGAAAGAT 59.385 33.333 3.23 0.0 38.28 2.40 R
8169 8187 0.172352 CAGACAGTTCCCTCTCGAGC 59.828 60.000 7.81 0.0 0.00 5.03 R
9334 10201 0.250901 TTTCTGCCAGGTTCTCCAGC 60.251 55.000 0.00 0.0 36.30 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 9.097257 TGTTTTCAAATTCATGAACTTTCTTCC 57.903 29.630 11.07 0.00 38.95 3.46
45 46 8.551205 GTTTTCAAATTCATGAACTTTCTTCCC 58.449 33.333 11.07 0.00 38.95 3.97
46 47 6.975196 TCAAATTCATGAACTTTCTTCCCA 57.025 33.333 11.07 0.00 0.00 4.37
47 48 7.358770 TCAAATTCATGAACTTTCTTCCCAA 57.641 32.000 11.07 0.00 0.00 4.12
48 49 7.790027 TCAAATTCATGAACTTTCTTCCCAAA 58.210 30.769 11.07 0.00 0.00 3.28
49 50 8.263640 TCAAATTCATGAACTTTCTTCCCAAAA 58.736 29.630 11.07 0.00 0.00 2.44
50 51 9.059260 CAAATTCATGAACTTTCTTCCCAAAAT 57.941 29.630 11.07 0.00 0.00 1.82
51 52 9.631257 AAATTCATGAACTTTCTTCCCAAAATT 57.369 25.926 11.07 0.00 0.00 1.82
52 53 9.631257 AATTCATGAACTTTCTTCCCAAAATTT 57.369 25.926 11.07 0.00 0.00 1.82
53 54 8.436046 TTCATGAACTTTCTTCCCAAAATTTG 57.564 30.769 3.38 0.00 0.00 2.32
54 55 7.563906 TCATGAACTTTCTTCCCAAAATTTGT 58.436 30.769 4.92 0.00 0.00 2.83
55 56 7.495279 TCATGAACTTTCTTCCCAAAATTTGTG 59.505 33.333 4.92 0.00 0.00 3.33
56 57 6.940739 TGAACTTTCTTCCCAAAATTTGTGA 58.059 32.000 4.92 0.00 0.00 3.58
57 58 7.563906 TGAACTTTCTTCCCAAAATTTGTGAT 58.436 30.769 4.92 0.00 0.00 3.06
58 59 8.046107 TGAACTTTCTTCCCAAAATTTGTGATT 58.954 29.630 4.92 0.00 0.00 2.57
59 60 8.806429 AACTTTCTTCCCAAAATTTGTGATTT 57.194 26.923 4.92 0.00 0.00 2.17
60 61 8.806429 ACTTTCTTCCCAAAATTTGTGATTTT 57.194 26.923 4.92 0.00 0.00 1.82
61 62 9.241919 ACTTTCTTCCCAAAATTTGTGATTTTT 57.758 25.926 4.92 0.00 0.00 1.94
208 209 9.918630 AGATTCATGAAGTTTTTCAAAATCGAT 57.081 25.926 14.54 0.00 45.82 3.59
209 210 9.947897 GATTCATGAAGTTTTTCAAAATCGATG 57.052 29.630 14.54 0.00 45.82 3.84
210 211 8.870160 TTCATGAAGTTTTTCAAAATCGATGT 57.130 26.923 3.38 0.00 45.82 3.06
211 212 8.870160 TCATGAAGTTTTTCAAAATCGATGTT 57.130 26.923 0.00 0.00 45.82 2.71
212 213 9.311916 TCATGAAGTTTTTCAAAATCGATGTTT 57.688 25.926 0.00 0.00 45.82 2.83
213 214 9.919348 CATGAAGTTTTTCAAAATCGATGTTTT 57.081 25.926 0.00 0.00 45.82 2.43
301 302 9.919348 AAAAATCGATGAACTTGTTCAAATTTG 57.081 25.926 18.31 12.15 34.24 2.32
302 303 8.647143 AAATCGATGAACTTGTTCAAATTTGT 57.353 26.923 18.31 2.98 34.24 2.83
303 304 9.743057 AAATCGATGAACTTGTTCAAATTTGTA 57.257 25.926 18.31 5.71 34.24 2.41
304 305 9.743057 AATCGATGAACTTGTTCAAATTTGTAA 57.257 25.926 18.31 10.53 34.24 2.41
305 306 9.743057 ATCGATGAACTTGTTCAAATTTGTAAA 57.257 25.926 18.31 9.65 34.24 2.01
306 307 9.015577 TCGATGAACTTGTTCAAATTTGTAAAC 57.984 29.630 18.31 15.08 34.24 2.01
307 308 8.265998 CGATGAACTTGTTCAAATTTGTAAACC 58.734 33.333 18.31 4.19 34.24 3.27
308 309 9.313118 GATGAACTTGTTCAAATTTGTAAACCT 57.687 29.630 18.31 0.00 34.24 3.50
309 310 9.665719 ATGAACTTGTTCAAATTTGTAAACCTT 57.334 25.926 18.31 7.35 34.24 3.50
310 311 9.495572 TGAACTTGTTCAAATTTGTAAACCTTT 57.504 25.926 17.47 8.53 0.00 3.11
313 314 9.719355 ACTTGTTCAAATTTGTAAACCTTTTCT 57.281 25.926 17.47 0.00 0.00 2.52
316 317 9.936759 TGTTCAAATTTGTAAACCTTTTCTTCT 57.063 25.926 17.47 0.00 0.00 2.85
323 324 9.720769 ATTTGTAAACCTTTTCTTCTAGATCGA 57.279 29.630 0.00 0.00 0.00 3.59
324 325 8.530269 TTGTAAACCTTTTCTTCTAGATCGAC 57.470 34.615 0.00 0.00 0.00 4.20
325 326 6.805271 TGTAAACCTTTTCTTCTAGATCGACG 59.195 38.462 0.00 0.00 0.00 5.12
326 327 5.640189 AACCTTTTCTTCTAGATCGACGA 57.360 39.130 0.00 0.00 0.00 4.20
327 328 5.640189 ACCTTTTCTTCTAGATCGACGAA 57.360 39.130 0.00 0.00 0.00 3.85
328 329 5.400703 ACCTTTTCTTCTAGATCGACGAAC 58.599 41.667 0.00 0.00 0.00 3.95
329 330 5.183522 ACCTTTTCTTCTAGATCGACGAACT 59.816 40.000 12.50 12.50 0.00 3.01
330 331 6.094061 CCTTTTCTTCTAGATCGACGAACTT 58.906 40.000 13.12 0.00 0.00 2.66
331 332 6.586844 CCTTTTCTTCTAGATCGACGAACTTT 59.413 38.462 13.12 0.00 0.00 2.66
332 333 7.116519 CCTTTTCTTCTAGATCGACGAACTTTT 59.883 37.037 13.12 0.00 0.00 2.27
333 334 7.941795 TTTCTTCTAGATCGACGAACTTTTT 57.058 32.000 13.12 0.00 0.00 1.94
334 335 7.564044 TTCTTCTAGATCGACGAACTTTTTC 57.436 36.000 13.12 0.00 0.00 2.29
335 336 6.675026 TCTTCTAGATCGACGAACTTTTTCA 58.325 36.000 13.12 0.00 0.00 2.69
336 337 7.143340 TCTTCTAGATCGACGAACTTTTTCAA 58.857 34.615 13.12 0.00 0.00 2.69
337 338 7.650504 TCTTCTAGATCGACGAACTTTTTCAAA 59.349 33.333 13.12 0.00 0.00 2.69
338 339 7.703298 TCTAGATCGACGAACTTTTTCAAAA 57.297 32.000 13.12 0.00 0.00 2.44
339 340 8.306680 TCTAGATCGACGAACTTTTTCAAAAT 57.693 30.769 13.12 0.00 0.00 1.82
340 341 8.770828 TCTAGATCGACGAACTTTTTCAAAATT 58.229 29.630 13.12 0.00 0.00 1.82
341 342 7.608974 AGATCGACGAACTTTTTCAAAATTG 57.391 32.000 0.00 0.00 0.00 2.32
342 343 6.636850 AGATCGACGAACTTTTTCAAAATTGG 59.363 34.615 0.00 0.00 0.00 3.16
343 344 5.038033 TCGACGAACTTTTTCAAAATTGGG 58.962 37.500 0.00 0.00 0.00 4.12
344 345 5.038033 CGACGAACTTTTTCAAAATTGGGA 58.962 37.500 0.00 0.00 0.00 4.37
345 346 5.517054 CGACGAACTTTTTCAAAATTGGGAA 59.483 36.000 0.00 0.00 0.00 3.97
346 347 6.507299 CGACGAACTTTTTCAAAATTGGGAAC 60.507 38.462 0.00 0.00 0.00 3.62
347 348 6.403049 ACGAACTTTTTCAAAATTGGGAACT 58.597 32.000 0.00 0.00 0.00 3.01
348 349 6.876789 ACGAACTTTTTCAAAATTGGGAACTT 59.123 30.769 0.00 0.00 0.00 2.66
349 350 7.389330 ACGAACTTTTTCAAAATTGGGAACTTT 59.611 29.630 0.00 0.00 0.00 2.66
350 351 8.233868 CGAACTTTTTCAAAATTGGGAACTTTT 58.766 29.630 0.00 0.00 0.00 2.27
351 352 9.906660 GAACTTTTTCAAAATTGGGAACTTTTT 57.093 25.926 0.00 0.00 0.00 1.94
352 353 9.906660 AACTTTTTCAAAATTGGGAACTTTTTC 57.093 25.926 0.00 0.00 0.00 2.29
353 354 9.295825 ACTTTTTCAAAATTGGGAACTTTTTCT 57.704 25.926 0.00 0.00 31.71 2.52
356 357 8.854614 TTTCAAAATTGGGAACTTTTTCTTCA 57.145 26.923 0.00 0.00 31.71 3.02
357 358 8.854614 TTCAAAATTGGGAACTTTTTCTTCAA 57.145 26.923 0.00 0.00 33.08 2.69
358 359 8.491331 TCAAAATTGGGAACTTTTTCTTCAAG 57.509 30.769 0.00 0.00 32.53 3.02
359 360 8.317679 TCAAAATTGGGAACTTTTTCTTCAAGA 58.682 29.630 0.00 0.00 32.53 3.02
360 361 9.112725 CAAAATTGGGAACTTTTTCTTCAAGAT 57.887 29.630 0.00 0.00 32.53 2.40
361 362 8.893219 AAATTGGGAACTTTTTCTTCAAGATC 57.107 30.769 0.00 0.00 32.53 2.75
362 363 5.689383 TGGGAACTTTTTCTTCAAGATCG 57.311 39.130 0.00 0.00 31.71 3.69
363 364 5.373222 TGGGAACTTTTTCTTCAAGATCGA 58.627 37.500 0.00 0.00 31.71 3.59
364 365 6.003950 TGGGAACTTTTTCTTCAAGATCGAT 58.996 36.000 0.00 0.00 31.71 3.59
365 366 6.072508 TGGGAACTTTTTCTTCAAGATCGATG 60.073 38.462 0.54 0.00 31.71 3.84
366 367 6.072452 GGGAACTTTTTCTTCAAGATCGATGT 60.072 38.462 0.54 0.00 31.71 3.06
367 368 7.119262 GGGAACTTTTTCTTCAAGATCGATGTA 59.881 37.037 0.54 0.00 31.71 2.29
368 369 7.958025 GGAACTTTTTCTTCAAGATCGATGTAC 59.042 37.037 0.54 0.00 31.71 2.90
369 370 8.608844 AACTTTTTCTTCAAGATCGATGTACT 57.391 30.769 0.54 0.00 0.00 2.73
370 371 8.608844 ACTTTTTCTTCAAGATCGATGTACTT 57.391 30.769 0.54 0.00 0.00 2.24
371 372 9.057089 ACTTTTTCTTCAAGATCGATGTACTTT 57.943 29.630 0.54 0.00 0.00 2.66
372 373 9.884465 CTTTTTCTTCAAGATCGATGTACTTTT 57.116 29.630 0.54 0.00 0.00 2.27
449 450 9.846248 AAATTCAATGGAGTCTTTTCTAATTCG 57.154 29.630 0.00 0.00 0.00 3.34
450 451 7.979444 TTCAATGGAGTCTTTTCTAATTCGT 57.021 32.000 0.00 0.00 0.00 3.85
451 452 7.364522 TCAATGGAGTCTTTTCTAATTCGTG 57.635 36.000 0.00 0.00 0.00 4.35
452 453 7.158697 TCAATGGAGTCTTTTCTAATTCGTGA 58.841 34.615 0.00 0.00 0.00 4.35
453 454 7.331934 TCAATGGAGTCTTTTCTAATTCGTGAG 59.668 37.037 0.00 0.00 0.00 3.51
454 455 6.097915 TGGAGTCTTTTCTAATTCGTGAGT 57.902 37.500 0.00 0.00 0.00 3.41
455 456 6.522054 TGGAGTCTTTTCTAATTCGTGAGTT 58.478 36.000 0.00 0.00 0.00 3.01
456 457 6.990349 TGGAGTCTTTTCTAATTCGTGAGTTT 59.010 34.615 0.00 0.00 0.00 2.66
457 458 7.497909 TGGAGTCTTTTCTAATTCGTGAGTTTT 59.502 33.333 0.00 0.00 0.00 2.43
458 459 8.343366 GGAGTCTTTTCTAATTCGTGAGTTTTT 58.657 33.333 0.00 0.00 0.00 1.94
476 477 3.859411 TTTTTCAAACCTGCGAACAGT 57.141 38.095 0.00 0.00 42.81 3.55
477 478 3.859411 TTTTCAAACCTGCGAACAGTT 57.141 38.095 0.00 0.00 42.81 3.16
478 479 3.859411 TTTCAAACCTGCGAACAGTTT 57.141 38.095 0.00 0.00 42.81 2.66
479 480 3.414549 TTCAAACCTGCGAACAGTTTC 57.585 42.857 0.00 0.00 42.81 2.78
480 481 2.639065 TCAAACCTGCGAACAGTTTCT 58.361 42.857 0.00 0.00 42.81 2.52
481 482 3.013921 TCAAACCTGCGAACAGTTTCTT 58.986 40.909 0.00 0.00 42.81 2.52
482 483 4.193090 TCAAACCTGCGAACAGTTTCTTA 58.807 39.130 0.00 0.00 42.81 2.10
483 484 4.819630 TCAAACCTGCGAACAGTTTCTTAT 59.180 37.500 0.00 0.00 42.81 1.73
484 485 5.298276 TCAAACCTGCGAACAGTTTCTTATT 59.702 36.000 0.00 0.00 42.81 1.40
485 486 5.767816 AACCTGCGAACAGTTTCTTATTT 57.232 34.783 0.00 0.00 42.81 1.40
486 487 5.358298 ACCTGCGAACAGTTTCTTATTTC 57.642 39.130 0.00 0.00 42.81 2.17
487 488 4.819630 ACCTGCGAACAGTTTCTTATTTCA 59.180 37.500 0.00 0.00 42.81 2.69
488 489 5.147162 CCTGCGAACAGTTTCTTATTTCAC 58.853 41.667 0.00 0.00 42.81 3.18
489 490 5.277779 CCTGCGAACAGTTTCTTATTTCACA 60.278 40.000 0.00 0.00 42.81 3.58
490 491 6.125327 TGCGAACAGTTTCTTATTTCACAA 57.875 33.333 0.00 0.00 0.00 3.33
491 492 6.556212 TGCGAACAGTTTCTTATTTCACAAA 58.444 32.000 0.00 0.00 0.00 2.83
492 493 6.470877 TGCGAACAGTTTCTTATTTCACAAAC 59.529 34.615 0.00 0.00 0.00 2.93
493 494 6.691388 GCGAACAGTTTCTTATTTCACAAACT 59.309 34.615 0.00 0.00 39.20 2.66
494 495 7.220108 GCGAACAGTTTCTTATTTCACAAACTT 59.780 33.333 0.00 0.00 37.04 2.66
495 496 9.072294 CGAACAGTTTCTTATTTCACAAACTTT 57.928 29.630 0.00 0.00 37.04 2.66
498 499 9.921637 ACAGTTTCTTATTTCACAAACTTTTGA 57.078 25.926 8.69 0.00 40.55 2.69
532 533 8.456904 AAAAACGTTTCTGGTTTTCTTTCTAC 57.543 30.769 15.01 0.00 44.38 2.59
533 534 5.746307 ACGTTTCTGGTTTTCTTTCTACC 57.254 39.130 0.00 0.00 0.00 3.18
534 535 5.434408 ACGTTTCTGGTTTTCTTTCTACCT 58.566 37.500 0.00 0.00 33.05 3.08
535 536 5.296035 ACGTTTCTGGTTTTCTTTCTACCTG 59.704 40.000 0.00 0.00 33.05 4.00
536 537 5.296035 CGTTTCTGGTTTTCTTTCTACCTGT 59.704 40.000 0.00 0.00 33.91 4.00
537 538 6.480981 CGTTTCTGGTTTTCTTTCTACCTGTA 59.519 38.462 0.00 0.00 33.91 2.74
538 539 7.517893 CGTTTCTGGTTTTCTTTCTACCTGTAC 60.518 40.741 0.00 0.00 33.91 2.90
539 540 5.861727 TCTGGTTTTCTTTCTACCTGTACC 58.138 41.667 0.00 0.00 33.91 3.34
540 541 5.367352 TCTGGTTTTCTTTCTACCTGTACCA 59.633 40.000 0.00 0.00 33.91 3.25
541 542 6.003859 TGGTTTTCTTTCTACCTGTACCAA 57.996 37.500 0.00 0.00 33.05 3.67
542 543 6.059484 TGGTTTTCTTTCTACCTGTACCAAG 58.941 40.000 0.00 0.00 33.05 3.61
543 544 6.060136 GGTTTTCTTTCTACCTGTACCAAGT 58.940 40.000 0.00 0.00 0.00 3.16
544 545 6.544931 GGTTTTCTTTCTACCTGTACCAAGTT 59.455 38.462 0.00 0.00 0.00 2.66
545 546 7.067859 GGTTTTCTTTCTACCTGTACCAAGTTT 59.932 37.037 0.00 0.00 0.00 2.66
546 547 7.797038 TTTCTTTCTACCTGTACCAAGTTTC 57.203 36.000 0.00 0.00 0.00 2.78
547 548 6.488769 TCTTTCTACCTGTACCAAGTTTCA 57.511 37.500 0.00 0.00 0.00 2.69
548 549 7.074653 TCTTTCTACCTGTACCAAGTTTCAT 57.925 36.000 0.00 0.00 0.00 2.57
549 550 7.514721 TCTTTCTACCTGTACCAAGTTTCATT 58.485 34.615 0.00 0.00 0.00 2.57
550 551 7.660208 TCTTTCTACCTGTACCAAGTTTCATTC 59.340 37.037 0.00 0.00 0.00 2.67
551 552 6.428083 TCTACCTGTACCAAGTTTCATTCA 57.572 37.500 0.00 0.00 0.00 2.57
552 553 6.464222 TCTACCTGTACCAAGTTTCATTCAG 58.536 40.000 0.00 0.00 0.00 3.02
553 554 4.398319 ACCTGTACCAAGTTTCATTCAGG 58.602 43.478 0.00 0.00 44.39 3.86
554 555 3.758554 CCTGTACCAAGTTTCATTCAGGG 59.241 47.826 0.00 0.00 37.94 4.45
555 556 4.506625 CCTGTACCAAGTTTCATTCAGGGA 60.507 45.833 0.00 0.00 37.94 4.20
556 557 4.651778 TGTACCAAGTTTCATTCAGGGAG 58.348 43.478 0.00 0.00 0.00 4.30
557 558 2.519013 ACCAAGTTTCATTCAGGGAGC 58.481 47.619 0.00 0.00 0.00 4.70
558 559 2.108952 ACCAAGTTTCATTCAGGGAGCT 59.891 45.455 0.00 0.00 0.00 4.09
559 560 2.490903 CCAAGTTTCATTCAGGGAGCTG 59.509 50.000 0.00 0.00 0.00 4.24
560 561 2.490903 CAAGTTTCATTCAGGGAGCTGG 59.509 50.000 0.00 0.00 0.00 4.85
561 562 1.005215 AGTTTCATTCAGGGAGCTGGG 59.995 52.381 0.00 0.00 0.00 4.45
562 563 0.332632 TTTCATTCAGGGAGCTGGGG 59.667 55.000 0.00 0.00 0.00 4.96
563 564 1.574526 TTCATTCAGGGAGCTGGGGG 61.575 60.000 0.00 0.00 0.00 5.40
564 565 2.128226 ATTCAGGGAGCTGGGGGT 59.872 61.111 0.00 0.00 0.00 4.95
565 566 0.988145 CATTCAGGGAGCTGGGGGTA 60.988 60.000 0.00 0.00 0.00 3.69
566 567 0.988678 ATTCAGGGAGCTGGGGGTAC 60.989 60.000 0.00 0.00 0.00 3.34
587 588 3.958860 GGCCGGCCCATAGAGCAT 61.959 66.667 36.64 0.00 0.00 3.79
588 589 2.113986 GCCGGCCCATAGAGCATT 59.886 61.111 18.11 0.00 0.00 3.56
589 590 1.968540 GCCGGCCCATAGAGCATTC 60.969 63.158 18.11 0.00 0.00 2.67
590 591 1.451504 CCGGCCCATAGAGCATTCA 59.548 57.895 0.00 0.00 0.00 2.57
591 592 0.886490 CCGGCCCATAGAGCATTCAC 60.886 60.000 0.00 0.00 0.00 3.18
592 593 1.224069 CGGCCCATAGAGCATTCACG 61.224 60.000 0.00 0.00 0.00 4.35
593 594 0.179045 GGCCCATAGAGCATTCACGT 60.179 55.000 0.00 0.00 0.00 4.49
594 595 0.940126 GCCCATAGAGCATTCACGTG 59.060 55.000 9.94 9.94 0.00 4.49
595 596 1.473257 GCCCATAGAGCATTCACGTGA 60.473 52.381 15.76 15.76 0.00 4.35
596 597 2.205074 CCCATAGAGCATTCACGTGAC 58.795 52.381 19.90 7.19 0.00 3.67
597 598 2.418609 CCCATAGAGCATTCACGTGACA 60.419 50.000 19.90 10.27 0.00 3.58
598 599 3.261580 CCATAGAGCATTCACGTGACAA 58.738 45.455 19.90 4.80 0.00 3.18
599 600 3.308053 CCATAGAGCATTCACGTGACAAG 59.692 47.826 19.90 12.04 0.00 3.16
600 601 1.151668 AGAGCATTCACGTGACAAGC 58.848 50.000 19.90 21.07 0.00 4.01
601 602 0.179240 GAGCATTCACGTGACAAGCG 60.179 55.000 19.90 6.14 0.00 4.68
602 603 1.793613 GCATTCACGTGACAAGCGC 60.794 57.895 19.90 12.47 0.00 5.92
603 604 1.154413 CATTCACGTGACAAGCGCC 60.154 57.895 19.90 0.00 0.00 6.53
604 605 2.667318 ATTCACGTGACAAGCGCCG 61.667 57.895 19.90 0.84 0.00 6.46
605 606 3.776659 TTCACGTGACAAGCGCCGA 62.777 57.895 19.90 0.00 0.00 5.54
606 607 3.112075 CACGTGACAAGCGCCGAT 61.112 61.111 10.90 0.00 0.00 4.18
607 608 2.357034 ACGTGACAAGCGCCGATT 60.357 55.556 2.29 0.00 0.00 3.34
608 609 1.080366 ACGTGACAAGCGCCGATTA 60.080 52.632 2.29 0.00 0.00 1.75
609 610 1.076533 ACGTGACAAGCGCCGATTAG 61.077 55.000 2.29 0.00 0.00 1.73
610 611 1.752501 CGTGACAAGCGCCGATTAGG 61.753 60.000 2.29 0.00 44.97 2.69
611 612 0.459585 GTGACAAGCGCCGATTAGGA 60.460 55.000 2.29 0.00 45.00 2.94
612 613 0.179111 TGACAAGCGCCGATTAGGAG 60.179 55.000 2.29 0.00 45.00 3.69
617 618 2.504032 CGCCGATTAGGAGCCCAA 59.496 61.111 0.00 0.00 45.00 4.12
618 619 1.153249 CGCCGATTAGGAGCCCAAA 60.153 57.895 0.00 0.00 45.00 3.28
619 620 0.746563 CGCCGATTAGGAGCCCAAAA 60.747 55.000 0.00 0.00 45.00 2.44
620 621 1.470051 GCCGATTAGGAGCCCAAAAA 58.530 50.000 0.00 0.00 45.00 1.94
641 642 1.739067 AAAGGAGCTCCCGAATTTCG 58.261 50.000 29.54 11.81 40.87 3.46
650 651 3.674906 CGAATTTCGGCCACCCAA 58.325 55.556 10.95 0.00 36.00 4.12
651 652 2.188912 CGAATTTCGGCCACCCAAT 58.811 52.632 10.95 0.00 36.00 3.16
652 653 0.179140 CGAATTTCGGCCACCCAATG 60.179 55.000 10.95 0.00 36.00 2.82
653 654 0.460109 GAATTTCGGCCACCCAATGC 60.460 55.000 2.24 0.00 0.00 3.56
654 655 1.898330 AATTTCGGCCACCCAATGCC 61.898 55.000 2.24 0.00 44.41 4.40
658 659 2.281767 GGCCACCCAATGCCCATA 59.718 61.111 0.00 0.00 41.97 2.74
659 660 1.152269 GGCCACCCAATGCCCATAT 60.152 57.895 0.00 0.00 41.97 1.78
660 661 1.474332 GGCCACCCAATGCCCATATG 61.474 60.000 0.00 0.00 41.97 1.78
661 662 0.760189 GCCACCCAATGCCCATATGT 60.760 55.000 1.24 0.00 0.00 2.29
662 663 1.042229 CCACCCAATGCCCATATGTG 58.958 55.000 1.24 0.00 0.00 3.21
663 664 1.042229 CACCCAATGCCCATATGTGG 58.958 55.000 0.51 0.51 45.61 4.17
671 672 4.462394 CCATATGTGGGCCGTCAG 57.538 61.111 0.00 0.00 42.11 3.51
672 673 1.893808 CCATATGTGGGCCGTCAGC 60.894 63.158 0.00 0.00 42.11 4.26
673 674 1.146930 CATATGTGGGCCGTCAGCT 59.853 57.895 0.00 0.00 43.05 4.24
674 675 0.464373 CATATGTGGGCCGTCAGCTT 60.464 55.000 0.00 0.00 43.05 3.74
675 676 0.179045 ATATGTGGGCCGTCAGCTTC 60.179 55.000 0.00 0.00 43.05 3.86
676 677 1.549243 TATGTGGGCCGTCAGCTTCA 61.549 55.000 0.00 0.00 43.05 3.02
677 678 2.045926 GTGGGCCGTCAGCTTCAT 60.046 61.111 0.00 0.00 43.05 2.57
678 679 1.220749 GTGGGCCGTCAGCTTCATA 59.779 57.895 0.00 0.00 43.05 2.15
679 680 0.811616 GTGGGCCGTCAGCTTCATAG 60.812 60.000 0.00 0.00 43.05 2.23
699 700 1.679680 GCCTAATTCGGCCCTTTAACC 59.320 52.381 9.85 0.00 44.41 2.85
700 701 2.685819 GCCTAATTCGGCCCTTTAACCT 60.686 50.000 9.85 0.00 44.41 3.50
701 702 2.949644 CCTAATTCGGCCCTTTAACCTG 59.050 50.000 0.00 0.00 0.00 4.00
702 703 1.847328 AATTCGGCCCTTTAACCTGG 58.153 50.000 0.00 0.00 0.00 4.45
703 704 0.683179 ATTCGGCCCTTTAACCTGGC 60.683 55.000 0.00 0.00 44.59 4.85
704 705 1.785353 TTCGGCCCTTTAACCTGGCT 61.785 55.000 0.00 0.00 44.71 4.75
705 706 2.046285 CGGCCCTTTAACCTGGCTG 61.046 63.158 0.00 6.34 44.71 4.85
706 707 1.076727 GGCCCTTTAACCTGGCTGT 59.923 57.895 0.00 0.00 44.71 4.40
707 708 1.250840 GGCCCTTTAACCTGGCTGTG 61.251 60.000 0.00 0.00 44.71 3.66
708 709 0.251165 GCCCTTTAACCTGGCTGTGA 60.251 55.000 0.00 0.00 42.01 3.58
709 710 1.821666 GCCCTTTAACCTGGCTGTGAA 60.822 52.381 0.00 0.00 42.01 3.18
710 711 2.162681 CCCTTTAACCTGGCTGTGAAG 58.837 52.381 0.00 0.00 0.00 3.02
711 712 2.224769 CCCTTTAACCTGGCTGTGAAGA 60.225 50.000 0.00 0.00 0.00 2.87
712 713 3.562176 CCCTTTAACCTGGCTGTGAAGAT 60.562 47.826 0.00 0.00 0.00 2.40
713 714 3.691609 CCTTTAACCTGGCTGTGAAGATC 59.308 47.826 0.00 0.00 0.00 2.75
714 715 3.350219 TTAACCTGGCTGTGAAGATCC 57.650 47.619 0.00 0.00 0.00 3.36
715 716 0.036010 AACCTGGCTGTGAAGATCCG 60.036 55.000 0.00 0.00 0.00 4.18
716 717 0.904865 ACCTGGCTGTGAAGATCCGA 60.905 55.000 0.00 0.00 0.00 4.55
717 718 0.250234 CCTGGCTGTGAAGATCCGAA 59.750 55.000 0.00 0.00 0.00 4.30
718 719 1.363744 CTGGCTGTGAAGATCCGAAC 58.636 55.000 0.00 0.00 0.00 3.95
719 720 0.976641 TGGCTGTGAAGATCCGAACT 59.023 50.000 0.00 0.00 0.00 3.01
720 721 1.066858 TGGCTGTGAAGATCCGAACTC 60.067 52.381 0.00 0.00 0.00 3.01
721 722 1.272781 GCTGTGAAGATCCGAACTCG 58.727 55.000 0.00 0.00 39.44 4.18
722 723 1.135373 GCTGTGAAGATCCGAACTCGA 60.135 52.381 0.00 0.00 43.02 4.04
723 724 2.791567 CTGTGAAGATCCGAACTCGAG 58.208 52.381 11.84 11.84 43.02 4.04
724 725 1.472878 TGTGAAGATCCGAACTCGAGG 59.527 52.381 18.41 0.00 43.02 4.63
725 726 1.103803 TGAAGATCCGAACTCGAGGG 58.896 55.000 18.41 8.69 43.02 4.30
726 727 0.386113 GAAGATCCGAACTCGAGGGG 59.614 60.000 18.41 14.64 43.02 4.79
727 728 0.324460 AAGATCCGAACTCGAGGGGT 60.324 55.000 18.41 4.29 43.02 4.95
728 729 0.752376 AGATCCGAACTCGAGGGGTC 60.752 60.000 18.41 13.95 43.02 4.46
729 730 2.061182 GATCCGAACTCGAGGGGTCG 62.061 65.000 18.41 20.34 43.02 4.79
730 731 2.833604 ATCCGAACTCGAGGGGTCGT 62.834 60.000 24.44 11.50 43.02 4.34
731 732 2.484203 CGAACTCGAGGGGTCGTC 59.516 66.667 18.41 3.22 43.02 4.20
732 733 2.330372 CGAACTCGAGGGGTCGTCA 61.330 63.158 18.41 0.00 43.02 4.35
733 734 1.212229 GAACTCGAGGGGTCGTCAC 59.788 63.158 18.41 0.00 0.00 3.67
734 735 1.228490 AACTCGAGGGGTCGTCACT 60.228 57.895 18.41 0.00 0.00 3.41
735 736 1.524863 AACTCGAGGGGTCGTCACTG 61.525 60.000 18.41 0.00 0.00 3.66
736 737 2.675423 TCGAGGGGTCGTCACTGG 60.675 66.667 0.00 0.00 0.00 4.00
737 738 3.760035 CGAGGGGTCGTCACTGGG 61.760 72.222 0.00 0.00 0.00 4.45
738 739 2.603776 GAGGGGTCGTCACTGGGT 60.604 66.667 0.00 0.00 0.00 4.51
739 740 1.304713 GAGGGGTCGTCACTGGGTA 60.305 63.158 0.00 0.00 0.00 3.69
740 741 0.686769 GAGGGGTCGTCACTGGGTAT 60.687 60.000 0.00 0.00 0.00 2.73
741 742 0.632835 AGGGGTCGTCACTGGGTATA 59.367 55.000 0.00 0.00 0.00 1.47
742 743 1.219724 AGGGGTCGTCACTGGGTATAT 59.780 52.381 0.00 0.00 0.00 0.86
743 744 1.343465 GGGGTCGTCACTGGGTATATG 59.657 57.143 0.00 0.00 0.00 1.78
744 745 1.343465 GGGTCGTCACTGGGTATATGG 59.657 57.143 0.00 0.00 0.00 2.74
745 746 1.343465 GGTCGTCACTGGGTATATGGG 59.657 57.143 0.00 0.00 0.00 4.00
746 747 1.343465 GTCGTCACTGGGTATATGGGG 59.657 57.143 0.00 0.00 0.00 4.96
747 748 1.218450 TCGTCACTGGGTATATGGGGA 59.782 52.381 0.00 0.00 0.00 4.81
748 749 2.043992 CGTCACTGGGTATATGGGGAA 58.956 52.381 0.00 0.00 0.00 3.97
749 750 2.224209 CGTCACTGGGTATATGGGGAAC 60.224 54.545 0.00 0.00 0.00 3.62
750 751 3.046374 GTCACTGGGTATATGGGGAACT 58.954 50.000 0.00 0.00 0.00 3.01
751 752 3.071167 GTCACTGGGTATATGGGGAACTC 59.929 52.174 0.00 0.00 0.00 3.01
752 753 3.051341 TCACTGGGTATATGGGGAACTCT 60.051 47.826 0.00 0.00 0.00 3.24
753 754 3.325135 CACTGGGTATATGGGGAACTCTC 59.675 52.174 0.00 0.00 0.00 3.20
754 755 2.907042 CTGGGTATATGGGGAACTCTCC 59.093 54.545 0.00 0.00 41.59 3.71
755 756 1.900486 GGGTATATGGGGAACTCTCCG 59.100 57.143 0.00 0.00 43.51 4.63
756 757 1.900486 GGTATATGGGGAACTCTCCGG 59.100 57.143 0.00 0.00 43.51 5.14
757 758 2.492196 GGTATATGGGGAACTCTCCGGA 60.492 54.545 2.93 2.93 43.51 5.14
758 759 2.016905 ATATGGGGAACTCTCCGGAG 57.983 55.000 26.32 26.32 43.51 4.63
759 760 0.931468 TATGGGGAACTCTCCGGAGA 59.069 55.000 31.67 31.67 43.51 3.71
760 761 0.042731 ATGGGGAACTCTCCGGAGAA 59.957 55.000 32.94 18.13 43.51 2.87
761 762 0.178915 TGGGGAACTCTCCGGAGAAA 60.179 55.000 32.94 14.05 43.51 2.52
762 763 0.981943 GGGGAACTCTCCGGAGAAAA 59.018 55.000 32.94 13.29 43.51 2.29
763 764 1.560146 GGGGAACTCTCCGGAGAAAAT 59.440 52.381 32.94 21.87 43.51 1.82
764 765 2.633488 GGGAACTCTCCGGAGAAAATG 58.367 52.381 32.94 23.53 43.51 2.32
765 766 2.633488 GGAACTCTCCGGAGAAAATGG 58.367 52.381 32.94 23.18 41.86 3.16
766 767 2.236395 GGAACTCTCCGGAGAAAATGGA 59.764 50.000 32.94 11.24 41.86 3.41
767 768 3.526534 GAACTCTCCGGAGAAAATGGAG 58.473 50.000 32.94 21.80 41.86 3.86
768 769 1.834263 ACTCTCCGGAGAAAATGGAGG 59.166 52.381 32.94 21.11 41.86 4.30
769 770 2.111384 CTCTCCGGAGAAAATGGAGGA 58.889 52.381 32.94 8.99 41.86 3.71
770 771 2.501723 CTCTCCGGAGAAAATGGAGGAA 59.498 50.000 32.94 8.21 41.86 3.36
771 772 2.910319 TCTCCGGAGAAAATGGAGGAAA 59.090 45.455 31.91 3.92 39.47 3.13
772 773 3.055094 TCTCCGGAGAAAATGGAGGAAAG 60.055 47.826 31.91 0.22 39.47 2.62
773 774 2.910319 TCCGGAGAAAATGGAGGAAAGA 59.090 45.455 0.00 0.00 0.00 2.52
774 775 3.329520 TCCGGAGAAAATGGAGGAAAGAA 59.670 43.478 0.00 0.00 0.00 2.52
775 776 4.079253 CCGGAGAAAATGGAGGAAAGAAA 58.921 43.478 0.00 0.00 0.00 2.52
776 777 4.522789 CCGGAGAAAATGGAGGAAAGAAAA 59.477 41.667 0.00 0.00 0.00 2.29
777 778 5.461526 CGGAGAAAATGGAGGAAAGAAAAC 58.538 41.667 0.00 0.00 0.00 2.43
778 779 5.241728 CGGAGAAAATGGAGGAAAGAAAACT 59.758 40.000 0.00 0.00 0.00 2.66
779 780 6.450545 GGAGAAAATGGAGGAAAGAAAACTG 58.549 40.000 0.00 0.00 0.00 3.16
780 781 6.265422 GGAGAAAATGGAGGAAAGAAAACTGA 59.735 38.462 0.00 0.00 0.00 3.41
781 782 7.282332 AGAAAATGGAGGAAAGAAAACTGAG 57.718 36.000 0.00 0.00 0.00 3.35
782 783 7.062957 AGAAAATGGAGGAAAGAAAACTGAGA 58.937 34.615 0.00 0.00 0.00 3.27
783 784 7.561356 AGAAAATGGAGGAAAGAAAACTGAGAA 59.439 33.333 0.00 0.00 0.00 2.87
784 785 6.890979 AATGGAGGAAAGAAAACTGAGAAG 57.109 37.500 0.00 0.00 0.00 2.85
785 786 5.373812 TGGAGGAAAGAAAACTGAGAAGT 57.626 39.130 0.00 0.00 0.00 3.01
786 787 5.368989 TGGAGGAAAGAAAACTGAGAAGTC 58.631 41.667 0.00 0.00 0.00 3.01
787 788 4.449405 GGAGGAAAGAAAACTGAGAAGTCG 59.551 45.833 0.00 0.00 0.00 4.18
788 789 4.381411 AGGAAAGAAAACTGAGAAGTCGG 58.619 43.478 0.00 0.00 34.88 4.79
789 790 4.101119 AGGAAAGAAAACTGAGAAGTCGGA 59.899 41.667 0.00 0.00 32.75 4.55
790 791 4.814771 GGAAAGAAAACTGAGAAGTCGGAA 59.185 41.667 0.00 0.00 32.75 4.30
791 792 5.277393 GGAAAGAAAACTGAGAAGTCGGAAC 60.277 44.000 0.00 0.00 32.75 3.62
820 821 4.863415 GGGGGTGAATGCTTCCAA 57.137 55.556 0.00 0.00 0.00 3.53
821 822 2.583472 GGGGGTGAATGCTTCCAAG 58.417 57.895 0.00 0.00 0.00 3.61
831 832 4.112341 CTTCCAAGCTGCTGCGCC 62.112 66.667 4.18 0.00 45.42 6.53
845 846 4.430765 CGCCCCGACGCTACAACT 62.431 66.667 0.00 0.00 0.00 3.16
846 847 2.508663 GCCCCGACGCTACAACTC 60.509 66.667 0.00 0.00 0.00 3.01
847 848 2.183555 CCCCGACGCTACAACTCC 59.816 66.667 0.00 0.00 0.00 3.85
848 849 2.183555 CCCGACGCTACAACTCCC 59.816 66.667 0.00 0.00 0.00 4.30
849 850 2.183555 CCGACGCTACAACTCCCC 59.816 66.667 0.00 0.00 0.00 4.81
850 851 2.642254 CCGACGCTACAACTCCCCA 61.642 63.158 0.00 0.00 0.00 4.96
851 852 1.290955 CGACGCTACAACTCCCCAA 59.709 57.895 0.00 0.00 0.00 4.12
852 853 1.012486 CGACGCTACAACTCCCCAAC 61.012 60.000 0.00 0.00 0.00 3.77
853 854 1.005394 ACGCTACAACTCCCCAACG 60.005 57.895 0.00 0.00 0.00 4.10
854 855 2.388232 CGCTACAACTCCCCAACGC 61.388 63.158 0.00 0.00 0.00 4.84
855 856 2.388232 GCTACAACTCCCCAACGCG 61.388 63.158 3.53 3.53 0.00 6.01
856 857 2.357760 TACAACTCCCCAACGCGC 60.358 61.111 5.73 0.00 0.00 6.86
874 875 3.070576 GCAAAGCCCCCTCGCATT 61.071 61.111 0.00 0.00 0.00 3.56
875 876 3.068729 GCAAAGCCCCCTCGCATTC 62.069 63.158 0.00 0.00 0.00 2.67
876 877 2.043953 AAAGCCCCCTCGCATTCC 60.044 61.111 0.00 0.00 0.00 3.01
877 878 3.995506 AAAGCCCCCTCGCATTCCG 62.996 63.158 0.00 0.00 38.61 4.30
885 886 2.682136 TCGCATTCCGAGGTGGGA 60.682 61.111 0.00 0.00 41.89 4.37
886 887 2.202932 CGCATTCCGAGGTGGGAG 60.203 66.667 0.00 0.00 40.02 4.30
887 888 2.514824 GCATTCCGAGGTGGGAGC 60.515 66.667 0.00 0.00 37.40 4.70
888 889 2.190578 CATTCCGAGGTGGGAGCC 59.809 66.667 0.00 0.00 37.40 4.70
889 890 3.090532 ATTCCGAGGTGGGAGCCC 61.091 66.667 0.00 0.00 37.40 5.19
901 902 4.496336 GAGCCCCAGCCGCTTCAT 62.496 66.667 0.00 0.00 41.25 2.57
902 903 4.496336 AGCCCCAGCCGCTTCATC 62.496 66.667 0.00 0.00 41.25 2.92
903 904 4.496336 GCCCCAGCCGCTTCATCT 62.496 66.667 0.00 0.00 0.00 2.90
904 905 2.203126 CCCCAGCCGCTTCATCTC 60.203 66.667 0.00 0.00 0.00 2.75
905 906 2.203126 CCCAGCCGCTTCATCTCC 60.203 66.667 0.00 0.00 0.00 3.71
906 907 2.203126 CCAGCCGCTTCATCTCCC 60.203 66.667 0.00 0.00 0.00 4.30
907 908 2.203126 CAGCCGCTTCATCTCCCC 60.203 66.667 0.00 0.00 0.00 4.81
908 909 3.854669 AGCCGCTTCATCTCCCCG 61.855 66.667 0.00 0.00 0.00 5.73
910 911 4.918201 CCGCTTCATCTCCCCGCC 62.918 72.222 0.00 0.00 0.00 6.13
911 912 4.918201 CGCTTCATCTCCCCGCCC 62.918 72.222 0.00 0.00 0.00 6.13
912 913 3.797353 GCTTCATCTCCCCGCCCA 61.797 66.667 0.00 0.00 0.00 5.36
913 914 2.998097 CTTCATCTCCCCGCCCAA 59.002 61.111 0.00 0.00 0.00 4.12
914 915 1.302949 CTTCATCTCCCCGCCCAAA 59.697 57.895 0.00 0.00 0.00 3.28
915 916 1.001393 TTCATCTCCCCGCCCAAAC 60.001 57.895 0.00 0.00 0.00 2.93
916 917 2.440247 CATCTCCCCGCCCAAACC 60.440 66.667 0.00 0.00 0.00 3.27
917 918 2.614013 ATCTCCCCGCCCAAACCT 60.614 61.111 0.00 0.00 0.00 3.50
918 919 2.238701 ATCTCCCCGCCCAAACCTT 61.239 57.895 0.00 0.00 0.00 3.50
919 920 2.211468 ATCTCCCCGCCCAAACCTTC 62.211 60.000 0.00 0.00 0.00 3.46
920 921 3.938637 CTCCCCGCCCAAACCTTCC 62.939 68.421 0.00 0.00 0.00 3.46
923 924 4.293671 CCGCCCAAACCTTCCCCA 62.294 66.667 0.00 0.00 0.00 4.96
924 925 2.989253 CGCCCAAACCTTCCCCAC 60.989 66.667 0.00 0.00 0.00 4.61
925 926 2.603473 GCCCAAACCTTCCCCACC 60.603 66.667 0.00 0.00 0.00 4.61
926 927 2.939298 CCCAAACCTTCCCCACCA 59.061 61.111 0.00 0.00 0.00 4.17
927 928 1.469251 CCCAAACCTTCCCCACCAT 59.531 57.895 0.00 0.00 0.00 3.55
928 929 0.707616 CCCAAACCTTCCCCACCATA 59.292 55.000 0.00 0.00 0.00 2.74
929 930 1.077993 CCCAAACCTTCCCCACCATAA 59.922 52.381 0.00 0.00 0.00 1.90
930 931 2.493687 CCCAAACCTTCCCCACCATAAA 60.494 50.000 0.00 0.00 0.00 1.40
931 932 3.449918 CCAAACCTTCCCCACCATAAAT 58.550 45.455 0.00 0.00 0.00 1.40
932 933 3.450817 CCAAACCTTCCCCACCATAAATC 59.549 47.826 0.00 0.00 0.00 2.17
933 934 2.729028 ACCTTCCCCACCATAAATCG 57.271 50.000 0.00 0.00 0.00 3.34
934 935 2.201830 ACCTTCCCCACCATAAATCGA 58.798 47.619 0.00 0.00 0.00 3.59
935 936 2.092592 ACCTTCCCCACCATAAATCGAC 60.093 50.000 0.00 0.00 0.00 4.20
936 937 2.572290 CTTCCCCACCATAAATCGACC 58.428 52.381 0.00 0.00 0.00 4.79
937 938 0.841289 TCCCCACCATAAATCGACCC 59.159 55.000 0.00 0.00 0.00 4.46
938 939 0.534203 CCCCACCATAAATCGACCCG 60.534 60.000 0.00 0.00 0.00 5.28
939 940 1.164041 CCCACCATAAATCGACCCGC 61.164 60.000 0.00 0.00 0.00 6.13
940 941 1.164041 CCACCATAAATCGACCCGCC 61.164 60.000 0.00 0.00 0.00 6.13
941 942 0.179056 CACCATAAATCGACCCGCCT 60.179 55.000 0.00 0.00 0.00 5.52
942 943 0.106149 ACCATAAATCGACCCGCCTC 59.894 55.000 0.00 0.00 0.00 4.70
943 944 0.602905 CCATAAATCGACCCGCCTCC 60.603 60.000 0.00 0.00 0.00 4.30
944 945 0.602905 CATAAATCGACCCGCCTCCC 60.603 60.000 0.00 0.00 0.00 4.30
945 946 2.095978 ATAAATCGACCCGCCTCCCG 62.096 60.000 0.00 0.00 0.00 5.14
954 955 3.702048 CGCCTCCCGGAAGAACCA 61.702 66.667 0.73 0.00 38.90 3.67
955 956 2.269241 GCCTCCCGGAAGAACCAG 59.731 66.667 0.73 0.00 38.90 4.00
956 957 2.269241 CCTCCCGGAAGAACCAGC 59.731 66.667 0.73 0.00 38.90 4.85
957 958 2.592993 CCTCCCGGAAGAACCAGCA 61.593 63.158 0.73 0.00 38.90 4.41
958 959 1.376037 CTCCCGGAAGAACCAGCAC 60.376 63.158 0.73 0.00 38.90 4.40
959 960 2.742372 CCCGGAAGAACCAGCACG 60.742 66.667 0.73 0.00 38.90 5.34
960 961 3.423154 CCGGAAGAACCAGCACGC 61.423 66.667 0.00 0.00 38.90 5.34
961 962 2.357517 CGGAAGAACCAGCACGCT 60.358 61.111 0.00 0.00 38.90 5.07
962 963 2.383527 CGGAAGAACCAGCACGCTC 61.384 63.158 0.00 0.00 38.90 5.03
963 964 2.035442 GGAAGAACCAGCACGCTCC 61.035 63.158 0.00 0.00 38.79 4.70
964 965 1.004440 GAAGAACCAGCACGCTCCT 60.004 57.895 0.00 0.00 0.00 3.69
965 966 1.004440 AAGAACCAGCACGCTCCTC 60.004 57.895 0.00 0.00 0.00 3.71
966 967 2.435059 GAACCAGCACGCTCCTCC 60.435 66.667 0.00 0.00 0.00 4.30
967 968 2.925170 AACCAGCACGCTCCTCCT 60.925 61.111 0.00 0.00 0.00 3.69
968 969 2.844072 GAACCAGCACGCTCCTCCTC 62.844 65.000 0.00 0.00 0.00 3.71
969 970 3.385384 CCAGCACGCTCCTCCTCA 61.385 66.667 0.00 0.00 0.00 3.86
970 971 2.125753 CAGCACGCTCCTCCTCAC 60.126 66.667 0.00 0.00 0.00 3.51
971 972 3.386237 AGCACGCTCCTCCTCACC 61.386 66.667 0.00 0.00 0.00 4.02
972 973 3.386237 GCACGCTCCTCCTCACCT 61.386 66.667 0.00 0.00 0.00 4.00
973 974 2.888863 CACGCTCCTCCTCACCTC 59.111 66.667 0.00 0.00 0.00 3.85
974 975 2.363147 ACGCTCCTCCTCACCTCC 60.363 66.667 0.00 0.00 0.00 4.30
975 976 3.151022 CGCTCCTCCTCACCTCCC 61.151 72.222 0.00 0.00 0.00 4.30
976 977 2.366570 GCTCCTCCTCACCTCCCT 59.633 66.667 0.00 0.00 0.00 4.20
977 978 2.063378 GCTCCTCCTCACCTCCCTG 61.063 68.421 0.00 0.00 0.00 4.45
978 979 2.039624 TCCTCCTCACCTCCCTGC 59.960 66.667 0.00 0.00 0.00 4.85
979 980 3.086600 CCTCCTCACCTCCCTGCC 61.087 72.222 0.00 0.00 0.00 4.85
980 981 2.284921 CTCCTCACCTCCCTGCCA 60.285 66.667 0.00 0.00 0.00 4.92
981 982 2.607750 TCCTCACCTCCCTGCCAC 60.608 66.667 0.00 0.00 0.00 5.01
982 983 3.721706 CCTCACCTCCCTGCCACC 61.722 72.222 0.00 0.00 0.00 4.61
983 984 3.721706 CTCACCTCCCTGCCACCC 61.722 72.222 0.00 0.00 0.00 4.61
998 999 4.860881 CCCCGCCCTAGCTCCAGA 62.861 72.222 0.00 0.00 36.60 3.86
999 1000 3.541713 CCCGCCCTAGCTCCAGAC 61.542 72.222 0.00 0.00 36.60 3.51
1000 1001 2.759973 CCGCCCTAGCTCCAGACA 60.760 66.667 0.00 0.00 36.60 3.41
1001 1002 2.136878 CCGCCCTAGCTCCAGACAT 61.137 63.158 0.00 0.00 36.60 3.06
1002 1003 1.068753 CGCCCTAGCTCCAGACATG 59.931 63.158 0.00 0.00 36.60 3.21
1003 1004 1.227793 GCCCTAGCTCCAGACATGC 60.228 63.158 0.00 0.00 35.50 4.06
1004 1005 1.449353 CCCTAGCTCCAGACATGCC 59.551 63.158 0.00 0.00 0.00 4.40
1005 1006 1.068753 CCTAGCTCCAGACATGCCG 59.931 63.158 0.00 0.00 0.00 5.69
1006 1007 1.395045 CCTAGCTCCAGACATGCCGA 61.395 60.000 0.00 0.00 0.00 5.54
1007 1008 0.031857 CTAGCTCCAGACATGCCGAG 59.968 60.000 0.00 0.00 0.00 4.63
1008 1009 2.021068 TAGCTCCAGACATGCCGAGC 62.021 60.000 13.25 13.25 46.49 5.03
1009 1010 2.898738 CTCCAGACATGCCGAGCT 59.101 61.111 0.00 0.00 0.00 4.09
1010 1011 1.227205 CTCCAGACATGCCGAGCTC 60.227 63.158 2.73 2.73 0.00 4.09
1011 1012 1.953231 CTCCAGACATGCCGAGCTCA 61.953 60.000 15.40 0.00 0.00 4.26
1012 1013 1.078918 CCAGACATGCCGAGCTCAA 60.079 57.895 15.40 0.00 0.00 3.02
1013 1014 0.674581 CCAGACATGCCGAGCTCAAA 60.675 55.000 15.40 0.00 0.00 2.69
1014 1015 0.725686 CAGACATGCCGAGCTCAAAG 59.274 55.000 15.40 2.59 0.00 2.77
1015 1016 0.610174 AGACATGCCGAGCTCAAAGA 59.390 50.000 15.40 0.00 0.00 2.52
1016 1017 1.002430 AGACATGCCGAGCTCAAAGAA 59.998 47.619 15.40 0.00 0.00 2.52
1017 1018 1.396301 GACATGCCGAGCTCAAAGAAG 59.604 52.381 15.40 1.02 0.00 2.85
1018 1019 1.002430 ACATGCCGAGCTCAAAGAAGA 59.998 47.619 15.40 0.00 0.00 2.87
1019 1020 2.079158 CATGCCGAGCTCAAAGAAGAA 58.921 47.619 15.40 0.00 0.00 2.52
1020 1021 1.512926 TGCCGAGCTCAAAGAAGAAC 58.487 50.000 15.40 0.00 0.00 3.01
1021 1022 1.202639 TGCCGAGCTCAAAGAAGAACA 60.203 47.619 15.40 0.00 0.00 3.18
1022 1023 1.873591 GCCGAGCTCAAAGAAGAACAA 59.126 47.619 15.40 0.00 0.00 2.83
1023 1024 2.290641 GCCGAGCTCAAAGAAGAACAAA 59.709 45.455 15.40 0.00 0.00 2.83
1024 1025 3.608008 GCCGAGCTCAAAGAAGAACAAAG 60.608 47.826 15.40 0.00 0.00 2.77
1025 1026 3.549574 CGAGCTCAAAGAAGAACAAAGC 58.450 45.455 15.40 0.00 0.00 3.51
1026 1027 3.249559 CGAGCTCAAAGAAGAACAAAGCT 59.750 43.478 15.40 0.00 41.05 3.74
1027 1028 4.260948 CGAGCTCAAAGAAGAACAAAGCTT 60.261 41.667 15.40 0.00 38.64 3.74
1028 1029 5.180367 AGCTCAAAGAAGAACAAAGCTTC 57.820 39.130 0.00 0.00 41.53 3.86
1029 1030 4.641989 AGCTCAAAGAAGAACAAAGCTTCA 59.358 37.500 0.00 0.00 43.19 3.02
1030 1031 4.974888 GCTCAAAGAAGAACAAAGCTTCAG 59.025 41.667 0.00 0.00 43.19 3.02
1031 1032 5.220931 GCTCAAAGAAGAACAAAGCTTCAGA 60.221 40.000 0.00 0.00 43.19 3.27
1032 1033 6.124088 TCAAAGAAGAACAAAGCTTCAGAC 57.876 37.500 0.00 0.00 43.19 3.51
1033 1034 5.882557 TCAAAGAAGAACAAAGCTTCAGACT 59.117 36.000 0.00 0.00 43.19 3.24
1034 1035 6.037610 TCAAAGAAGAACAAAGCTTCAGACTC 59.962 38.462 0.00 0.00 43.19 3.36
1035 1036 4.054671 AGAAGAACAAAGCTTCAGACTCG 58.945 43.478 0.00 0.00 43.19 4.18
1036 1037 3.460857 AGAACAAAGCTTCAGACTCGT 57.539 42.857 0.00 0.00 0.00 4.18
1037 1038 3.385577 AGAACAAAGCTTCAGACTCGTC 58.614 45.455 0.00 0.00 0.00 4.20
1038 1039 2.156343 ACAAAGCTTCAGACTCGTCC 57.844 50.000 0.00 0.00 0.00 4.79
1039 1040 1.412710 ACAAAGCTTCAGACTCGTCCA 59.587 47.619 0.00 0.00 0.00 4.02
1040 1041 2.158957 ACAAAGCTTCAGACTCGTCCAA 60.159 45.455 0.00 0.00 0.00 3.53
1041 1042 2.447244 AAGCTTCAGACTCGTCCAAG 57.553 50.000 0.00 0.00 0.00 3.61
1042 1043 1.621992 AGCTTCAGACTCGTCCAAGA 58.378 50.000 9.42 0.00 0.00 3.02
1043 1044 1.964223 AGCTTCAGACTCGTCCAAGAA 59.036 47.619 9.42 4.60 0.00 2.52
1044 1045 2.564947 AGCTTCAGACTCGTCCAAGAAT 59.435 45.455 9.42 0.00 0.00 2.40
1057 1058 3.198635 GTCCAAGAATCTCCAGATGGTGA 59.801 47.826 6.12 6.12 41.34 4.02
1062 1063 3.071312 AGAATCTCCAGATGGTGATCAGC 59.929 47.826 18.01 18.01 44.86 4.26
1066 1067 0.873312 CCAGATGGTGATCAGCGACG 60.873 60.000 19.36 8.17 36.78 5.12
1067 1068 0.873312 CAGATGGTGATCAGCGACGG 60.873 60.000 19.36 12.32 36.78 4.79
1068 1069 2.202932 ATGGTGATCAGCGACGGC 60.203 61.111 19.36 0.00 40.37 5.68
1070 1071 2.434185 GGTGATCAGCGACGGCAA 60.434 61.111 9.50 0.00 43.41 4.52
1073 1074 2.892425 GATCAGCGACGGCAAGGG 60.892 66.667 0.00 0.00 43.41 3.95
1143 1144 2.499685 GACCAGATACGGCCGCTT 59.500 61.111 28.58 13.62 0.00 4.68
1146 1147 1.300233 CCAGATACGGCCGCTTCTC 60.300 63.158 28.58 16.56 0.00 2.87
1215 1217 2.882876 CTCCCGACGATCGTGGTT 59.117 61.111 28.12 0.00 38.40 3.67
1251 1253 2.048127 GGCAAGTCGAGCGTCCTT 60.048 61.111 0.00 0.00 0.00 3.36
1366 1371 4.099170 CGGTGCTGCAGCTTGAGC 62.099 66.667 36.61 25.18 42.66 4.26
1370 1375 1.602605 TGCTGCAGCTTGAGCACAT 60.603 52.632 36.61 0.00 45.16 3.21
1423 1428 4.365505 TCGCGGACGCCATCAACA 62.366 61.111 6.13 0.00 39.84 3.33
1704 1709 4.320456 CAGCAGGTGGACCGCACT 62.320 66.667 7.48 0.00 42.08 4.40
1851 1856 0.033011 AGACCTATGACCAGGCTCGT 60.033 55.000 0.00 0.00 39.53 4.18
1883 1888 2.438021 AGAAGCTGTTCAAGTACCACCA 59.562 45.455 0.00 0.00 34.82 4.17
1884 1889 3.073062 AGAAGCTGTTCAAGTACCACCAT 59.927 43.478 0.00 0.00 34.82 3.55
1929 1934 1.607467 GGTGGGCATTCCTGTGCTT 60.607 57.895 0.00 0.00 44.45 3.91
2375 2391 1.227234 CCGTCATGCAGATACCGCA 60.227 57.895 0.00 0.00 44.94 5.69
2378 2394 1.212616 GTCATGCAGATACCGCACTC 58.787 55.000 0.00 0.00 43.35 3.51
2484 2500 1.073923 CCTAGAGGGTTGTGCTGGTTT 59.926 52.381 0.00 0.00 0.00 3.27
2725 2741 2.182030 CTCTGTTCCGGCTCCGAC 59.818 66.667 10.28 1.51 42.83 4.79
3413 3430 1.211969 GCACTCCGTCGTCAGCTTA 59.788 57.895 0.00 0.00 0.00 3.09
3863 3881 1.282157 GGGCCTCCAAGTGTCATAAGT 59.718 52.381 0.84 0.00 0.00 2.24
4546 4564 7.264373 GAAGAGTCATCAACTTCCTTTTTCA 57.736 36.000 0.00 0.00 38.74 2.69
4937 4955 2.025037 ACTCTTTTGGCCCATGCATCTA 60.025 45.455 0.00 0.00 40.13 1.98
5309 5327 2.641321 CCATCCCTGCATTCATCCTCTA 59.359 50.000 0.00 0.00 0.00 2.43
6134 6152 1.555992 CTCCACCACCACGGGTAAATA 59.444 52.381 0.00 0.00 39.79 1.40
6203 6221 3.581755 TCTATTGAGCGTTACAAAGCGT 58.418 40.909 0.00 0.00 38.46 5.07
6438 6456 5.621193 TGATCGTCCTGACTATATCTGTCA 58.379 41.667 10.00 10.00 41.48 3.58
6776 6794 6.936968 AGAAGTACTCCTTGGAGTTGTTAT 57.063 37.500 25.01 14.09 36.68 1.89
7519 7537 0.396811 AGTTTGAGGCTTGTAGGCGT 59.603 50.000 0.00 0.00 46.58 5.68
7830 7848 0.106335 AGATGCTGATGGAGAAGGCG 59.894 55.000 0.00 0.00 0.00 5.52
7866 7884 2.039818 AGCACATTGAGGAGCTGATG 57.960 50.000 0.00 0.00 35.72 3.07
7936 7954 4.466370 AGACTTGGTACGAGATCATGGAAA 59.534 41.667 0.00 0.00 0.00 3.13
7956 7974 6.655003 TGGAAAGTCATGAGAAGTTTATGGAC 59.345 38.462 0.00 0.00 0.00 4.02
8196 8214 0.318762 GGGAACTGTCTGACGAGCTT 59.681 55.000 2.98 0.69 0.00 3.74
8202 8220 0.468226 TGTCTGACGAGCTTTTGGGT 59.532 50.000 2.98 0.00 0.00 4.51
8337 8355 3.371273 CCAACATCATGGACAGGATCAGT 60.371 47.826 0.00 0.00 43.54 3.41
8343 8361 1.517257 GGACAGGATCAGTGCGTCG 60.517 63.158 0.00 0.00 0.00 5.12
8360 8378 2.686915 CGTCGGGTGAAATCTAGGTAGT 59.313 50.000 0.00 0.00 0.00 2.73
8371 8389 3.116096 TCTAGGTAGTTGGGCATCAGT 57.884 47.619 0.00 0.00 0.00 3.41
8374 8392 1.003580 AGGTAGTTGGGCATCAGTGTG 59.996 52.381 0.00 0.00 0.00 3.82
8387 8405 2.604139 TCAGTGTGTGTGATGTCCCTA 58.396 47.619 0.00 0.00 0.00 3.53
8389 8407 1.902508 AGTGTGTGTGATGTCCCTAGG 59.097 52.381 0.06 0.06 0.00 3.02
8390 8408 1.899814 GTGTGTGTGATGTCCCTAGGA 59.100 52.381 11.48 0.00 0.00 2.94
8411 8466 0.684535 TTGTCTTCTGGATGGTGCGA 59.315 50.000 0.00 0.00 0.00 5.10
8414 8469 1.936547 GTCTTCTGGATGGTGCGATTC 59.063 52.381 0.00 0.00 0.00 2.52
8419 8474 1.153449 GGATGGTGCGATTCGGTGA 60.153 57.895 8.34 0.00 0.00 4.02
8420 8475 0.742990 GGATGGTGCGATTCGGTGAA 60.743 55.000 8.34 0.00 0.00 3.18
8421 8476 0.373716 GATGGTGCGATTCGGTGAAC 59.626 55.000 8.34 0.00 0.00 3.18
8454 8510 7.977904 TGCTTCATGTTCAGTTATGTTATGAG 58.022 34.615 0.00 0.00 0.00 2.90
8455 8511 6.909357 GCTTCATGTTCAGTTATGTTATGAGC 59.091 38.462 0.00 0.00 0.00 4.26
8460 8516 5.066375 TGTTCAGTTATGTTATGAGCCATGC 59.934 40.000 0.00 0.00 0.00 4.06
8494 8550 9.173939 GTATGCTCAGTTATGTTATGCATTTTC 57.826 33.333 3.54 0.00 39.79 2.29
8497 8553 8.306038 TGCTCAGTTATGTTATGCATTTTCTTT 58.694 29.630 3.54 0.00 38.94 2.52
8527 8583 2.005451 GGTGATGACTGATGCAGTGTC 58.995 52.381 4.60 8.88 45.44 3.67
8530 8586 3.688185 GTGATGACTGATGCAGTGTCAAT 59.312 43.478 18.53 10.32 45.44 2.57
8556 8612 4.003648 GCTGTGGTTCTATGTTAGCAAGT 58.996 43.478 0.00 0.00 0.00 3.16
8557 8613 4.142816 GCTGTGGTTCTATGTTAGCAAGTG 60.143 45.833 0.00 0.00 0.00 3.16
8577 8633 8.400947 GCAAGTGATGTTCTGTTATGTTATGAT 58.599 33.333 0.00 0.00 0.00 2.45
8602 8658 9.807649 ATCATTATTAATTCCTCACAAACTTGC 57.192 29.630 0.00 0.00 0.00 4.01
8619 8675 7.394359 ACAAACTTGCTATGTTCAGTTATGGAT 59.606 33.333 0.00 0.00 0.00 3.41
8621 8677 6.653020 ACTTGCTATGTTCAGTTATGGATCA 58.347 36.000 0.00 0.00 0.00 2.92
8755 8811 3.007506 TGATCTTCAAGGCAAACGAGGTA 59.992 43.478 0.00 0.00 0.00 3.08
8757 8813 1.464997 CTTCAAGGCAAACGAGGTAGC 59.535 52.381 0.00 0.00 0.00 3.58
8759 8815 1.071699 TCAAGGCAAACGAGGTAGCTT 59.928 47.619 0.00 0.00 0.00 3.74
8760 8816 2.300723 TCAAGGCAAACGAGGTAGCTTA 59.699 45.455 0.00 0.00 0.00 3.09
8761 8817 2.673368 CAAGGCAAACGAGGTAGCTTAG 59.327 50.000 0.00 0.00 0.00 2.18
8762 8818 1.900486 AGGCAAACGAGGTAGCTTAGT 59.100 47.619 0.00 0.00 0.00 2.24
8763 8819 2.302157 AGGCAAACGAGGTAGCTTAGTT 59.698 45.455 9.87 9.87 0.00 2.24
8765 8821 2.344741 GCAAACGAGGTAGCTTAGTTCG 59.655 50.000 14.28 7.80 37.31 3.95
8766 8822 2.274920 AACGAGGTAGCTTAGTTCGC 57.725 50.000 9.87 0.00 34.84 4.70
8767 8823 1.171308 ACGAGGTAGCTTAGTTCGCA 58.829 50.000 0.00 0.00 34.84 5.10
8769 8825 2.165845 ACGAGGTAGCTTAGTTCGCAAT 59.834 45.455 0.00 0.00 34.84 3.56
8780 8836 7.535139 AGCTTAGTTCGCAATTTTTAAGCATA 58.465 30.769 14.23 0.00 43.18 3.14
8795 8852 8.500753 TTTTAAGCATATCGTACTTGAACCAT 57.499 30.769 0.00 0.00 0.00 3.55
8812 9577 9.612620 CTTGAACCATTTTCATACTAGTTTGAC 57.387 33.333 14.66 3.17 0.00 3.18
8851 9621 5.395103 CCAAGAAACAACTGTTGGGATTTCA 60.395 40.000 24.59 0.00 38.44 2.69
8864 9634 8.372877 TGTTGGGATTTCATGGTTTTATATGT 57.627 30.769 0.00 0.00 0.00 2.29
8867 9641 9.928618 TTGGGATTTCATGGTTTTATATGTAGA 57.071 29.630 0.00 0.00 0.00 2.59
8881 9655 8.762481 TTTATATGTAGAGTCTGAACCTAGCA 57.238 34.615 1.86 0.00 0.00 3.49
8885 9659 6.641169 TGTAGAGTCTGAACCTAGCATATG 57.359 41.667 1.86 0.00 0.00 1.78
8886 9660 4.599047 AGAGTCTGAACCTAGCATATGC 57.401 45.455 20.36 20.36 42.49 3.14
8893 9698 7.227512 AGTCTGAACCTAGCATATGCATAAAAC 59.772 37.037 28.62 15.53 45.16 2.43
8914 9719 3.258372 ACGAGTTTCTTCTCCAGCATACA 59.742 43.478 0.00 0.00 0.00 2.29
8948 9777 6.870971 TCTTGAATGTAAAGGGTACAACAC 57.129 37.500 0.00 0.00 0.00 3.32
8963 9792 3.200483 ACAACACGAGAAAGTACCCAAC 58.800 45.455 0.00 0.00 0.00 3.77
9137 10004 3.976793 TGAAGAAAGCTGCACAAAGAG 57.023 42.857 1.02 0.00 0.00 2.85
9204 10071 7.346471 AGAAAGCTGGGCTAATAGAAATACAA 58.654 34.615 0.00 0.00 38.25 2.41
9234 10101 3.274095 TGTATCATGGCCGTGATCAAA 57.726 42.857 37.85 23.63 39.45 2.69
9334 10201 4.227864 AGGTTCATTAAAGCTCCTGGAG 57.772 45.455 19.55 19.55 41.91 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 9.097257 GGAAGAAAGTTCATGAATTTGAAAACA 57.903 29.630 15.98 0.00 37.36 2.83
19 20 8.551205 GGGAAGAAAGTTCATGAATTTGAAAAC 58.449 33.333 15.98 7.82 37.36 2.43
20 21 8.263640 TGGGAAGAAAGTTCATGAATTTGAAAA 58.736 29.630 15.98 0.00 37.36 2.29
21 22 7.790027 TGGGAAGAAAGTTCATGAATTTGAAA 58.210 30.769 15.98 0.00 37.36 2.69
22 23 7.358770 TGGGAAGAAAGTTCATGAATTTGAA 57.641 32.000 15.98 0.00 33.32 2.69
23 24 6.975196 TGGGAAGAAAGTTCATGAATTTGA 57.025 33.333 15.98 0.00 0.00 2.69
24 25 8.436046 TTTTGGGAAGAAAGTTCATGAATTTG 57.564 30.769 15.98 0.00 0.00 2.32
25 26 9.631257 AATTTTGGGAAGAAAGTTCATGAATTT 57.369 25.926 12.12 11.05 0.00 1.82
26 27 9.631257 AAATTTTGGGAAGAAAGTTCATGAATT 57.369 25.926 12.12 4.21 0.00 2.17
27 28 9.059260 CAAATTTTGGGAAGAAAGTTCATGAAT 57.941 29.630 12.12 0.00 0.00 2.57
28 29 8.046107 ACAAATTTTGGGAAGAAAGTTCATGAA 58.954 29.630 13.42 3.38 34.12 2.57
29 30 7.495279 CACAAATTTTGGGAAGAAAGTTCATGA 59.505 33.333 13.42 0.00 35.62 3.07
30 31 7.495279 TCACAAATTTTGGGAAGAAAGTTCATG 59.505 33.333 11.61 0.00 40.82 3.07
31 32 7.563906 TCACAAATTTTGGGAAGAAAGTTCAT 58.436 30.769 11.61 0.00 40.82 2.57
32 33 6.940739 TCACAAATTTTGGGAAGAAAGTTCA 58.059 32.000 11.61 0.00 40.82 3.18
182 183 9.918630 ATCGATTTTGAAAAACTTCATGAATCT 57.081 25.926 8.96 0.00 34.83 2.40
183 184 9.947897 CATCGATTTTGAAAAACTTCATGAATC 57.052 29.630 8.96 3.81 34.29 2.52
184 185 9.480053 ACATCGATTTTGAAAAACTTCATGAAT 57.520 25.926 8.96 0.00 0.00 2.57
185 186 8.870160 ACATCGATTTTGAAAAACTTCATGAA 57.130 26.923 8.12 8.12 0.00 2.57
186 187 8.870160 AACATCGATTTTGAAAAACTTCATGA 57.130 26.923 0.00 0.00 0.00 3.07
187 188 9.919348 AAAACATCGATTTTGAAAAACTTCATG 57.081 25.926 0.00 0.00 30.56 3.07
284 285 9.495572 AAAGGTTTACAAATTTGAACAAGTTCA 57.504 25.926 24.64 11.34 46.72 3.18
287 288 9.719355 AGAAAAGGTTTACAAATTTGAACAAGT 57.281 25.926 24.64 3.62 0.00 3.16
290 291 9.936759 AGAAGAAAAGGTTTACAAATTTGAACA 57.063 25.926 24.64 6.50 0.00 3.18
297 298 9.720769 TCGATCTAGAAGAAAAGGTTTACAAAT 57.279 29.630 0.00 0.00 0.00 2.32
298 299 8.985805 GTCGATCTAGAAGAAAAGGTTTACAAA 58.014 33.333 0.00 0.00 0.00 2.83
299 300 7.327761 CGTCGATCTAGAAGAAAAGGTTTACAA 59.672 37.037 0.00 0.00 0.00 2.41
300 301 6.805271 CGTCGATCTAGAAGAAAAGGTTTACA 59.195 38.462 0.00 0.00 0.00 2.41
301 302 7.025963 TCGTCGATCTAGAAGAAAAGGTTTAC 58.974 38.462 0.00 0.00 0.00 2.01
302 303 7.149569 TCGTCGATCTAGAAGAAAAGGTTTA 57.850 36.000 0.00 0.00 0.00 2.01
303 304 6.022163 TCGTCGATCTAGAAGAAAAGGTTT 57.978 37.500 0.00 0.00 0.00 3.27
304 305 5.640189 TCGTCGATCTAGAAGAAAAGGTT 57.360 39.130 0.00 0.00 0.00 3.50
305 306 5.183522 AGTTCGTCGATCTAGAAGAAAAGGT 59.816 40.000 3.99 0.00 39.54 3.50
306 307 5.642686 AGTTCGTCGATCTAGAAGAAAAGG 58.357 41.667 3.99 0.00 39.54 3.11
307 308 7.569677 AAAGTTCGTCGATCTAGAAGAAAAG 57.430 36.000 6.26 0.00 39.54 2.27
308 309 7.941795 AAAAGTTCGTCGATCTAGAAGAAAA 57.058 32.000 6.26 0.00 39.54 2.29
309 310 7.650504 TGAAAAAGTTCGTCGATCTAGAAGAAA 59.349 33.333 6.26 0.00 39.54 2.52
310 311 7.143340 TGAAAAAGTTCGTCGATCTAGAAGAA 58.857 34.615 6.26 0.00 36.55 2.52
311 312 6.675026 TGAAAAAGTTCGTCGATCTAGAAGA 58.325 36.000 6.26 0.00 36.46 2.87
312 313 6.929587 TGAAAAAGTTCGTCGATCTAGAAG 57.070 37.500 6.26 0.00 36.46 2.85
313 314 7.703298 TTTGAAAAAGTTCGTCGATCTAGAA 57.297 32.000 6.26 0.00 36.46 2.10
314 315 7.703298 TTTTGAAAAAGTTCGTCGATCTAGA 57.297 32.000 6.26 0.00 36.46 2.43
315 316 8.831372 CAATTTTGAAAAAGTTCGTCGATCTAG 58.169 33.333 6.26 0.00 36.46 2.43
316 317 7.801315 CCAATTTTGAAAAAGTTCGTCGATCTA 59.199 33.333 6.26 0.00 36.46 1.98
317 318 6.636850 CCAATTTTGAAAAAGTTCGTCGATCT 59.363 34.615 0.00 0.00 36.46 2.75
318 319 6.129194 CCCAATTTTGAAAAAGTTCGTCGATC 60.129 38.462 0.00 0.00 36.46 3.69
319 320 5.689961 CCCAATTTTGAAAAAGTTCGTCGAT 59.310 36.000 0.00 0.00 36.46 3.59
320 321 5.038033 CCCAATTTTGAAAAAGTTCGTCGA 58.962 37.500 0.00 0.00 36.46 4.20
321 322 5.038033 TCCCAATTTTGAAAAAGTTCGTCG 58.962 37.500 0.00 0.00 36.46 5.12
322 323 6.533723 AGTTCCCAATTTTGAAAAAGTTCGTC 59.466 34.615 0.00 0.00 36.46 4.20
323 324 6.403049 AGTTCCCAATTTTGAAAAAGTTCGT 58.597 32.000 0.00 0.00 36.46 3.85
324 325 6.902224 AGTTCCCAATTTTGAAAAAGTTCG 57.098 33.333 0.00 0.00 36.46 3.95
325 326 9.906660 AAAAAGTTCCCAATTTTGAAAAAGTTC 57.093 25.926 0.00 0.00 0.00 3.01
326 327 9.906660 GAAAAAGTTCCCAATTTTGAAAAAGTT 57.093 25.926 0.00 0.00 0.00 2.66
327 328 9.295825 AGAAAAAGTTCCCAATTTTGAAAAAGT 57.704 25.926 0.00 0.00 33.92 2.66
330 331 9.289782 TGAAGAAAAAGTTCCCAATTTTGAAAA 57.710 25.926 0.00 0.00 33.92 2.29
331 332 8.854614 TGAAGAAAAAGTTCCCAATTTTGAAA 57.145 26.923 0.00 0.00 33.92 2.69
332 333 8.854614 TTGAAGAAAAAGTTCCCAATTTTGAA 57.145 26.923 0.00 0.00 33.92 2.69
333 334 8.317679 TCTTGAAGAAAAAGTTCCCAATTTTGA 58.682 29.630 0.00 0.00 33.92 2.69
334 335 8.491331 TCTTGAAGAAAAAGTTCCCAATTTTG 57.509 30.769 0.00 0.00 33.92 2.44
335 336 9.330063 GATCTTGAAGAAAAAGTTCCCAATTTT 57.670 29.630 0.00 0.00 33.92 1.82
336 337 7.653311 CGATCTTGAAGAAAAAGTTCCCAATTT 59.347 33.333 0.00 0.00 33.92 1.82
337 338 7.014230 TCGATCTTGAAGAAAAAGTTCCCAATT 59.986 33.333 0.00 0.00 33.92 2.32
338 339 6.490040 TCGATCTTGAAGAAAAAGTTCCCAAT 59.510 34.615 0.00 0.00 33.92 3.16
339 340 5.825679 TCGATCTTGAAGAAAAAGTTCCCAA 59.174 36.000 0.00 0.00 33.92 4.12
340 341 5.373222 TCGATCTTGAAGAAAAAGTTCCCA 58.627 37.500 0.00 0.00 33.92 4.37
341 342 5.941948 TCGATCTTGAAGAAAAAGTTCCC 57.058 39.130 0.00 0.00 33.92 3.97
342 343 6.903419 ACATCGATCTTGAAGAAAAAGTTCC 58.097 36.000 0.00 0.00 33.92 3.62
343 344 8.713271 AGTACATCGATCTTGAAGAAAAAGTTC 58.287 33.333 0.00 0.00 0.00 3.01
344 345 8.608844 AGTACATCGATCTTGAAGAAAAAGTT 57.391 30.769 0.00 0.00 0.00 2.66
345 346 8.608844 AAGTACATCGATCTTGAAGAAAAAGT 57.391 30.769 0.00 0.00 0.00 2.66
346 347 9.884465 AAAAGTACATCGATCTTGAAGAAAAAG 57.116 29.630 0.00 0.00 0.00 2.27
423 424 9.846248 CGAATTAGAAAAGACTCCATTGAATTT 57.154 29.630 0.00 0.00 0.00 1.82
424 425 9.014297 ACGAATTAGAAAAGACTCCATTGAATT 57.986 29.630 0.00 0.00 0.00 2.17
425 426 8.454106 CACGAATTAGAAAAGACTCCATTGAAT 58.546 33.333 0.00 0.00 0.00 2.57
426 427 7.659799 TCACGAATTAGAAAAGACTCCATTGAA 59.340 33.333 0.00 0.00 0.00 2.69
427 428 7.158697 TCACGAATTAGAAAAGACTCCATTGA 58.841 34.615 0.00 0.00 0.00 2.57
428 429 7.118390 ACTCACGAATTAGAAAAGACTCCATTG 59.882 37.037 0.00 0.00 0.00 2.82
429 430 7.162082 ACTCACGAATTAGAAAAGACTCCATT 58.838 34.615 0.00 0.00 0.00 3.16
430 431 6.702329 ACTCACGAATTAGAAAAGACTCCAT 58.298 36.000 0.00 0.00 0.00 3.41
431 432 6.097915 ACTCACGAATTAGAAAAGACTCCA 57.902 37.500 0.00 0.00 0.00 3.86
432 433 7.422878 AAACTCACGAATTAGAAAAGACTCC 57.577 36.000 0.00 0.00 0.00 3.85
456 457 4.181309 AACTGTTCGCAGGTTTGAAAAA 57.819 36.364 0.00 0.00 43.92 1.94
457 458 3.859411 AACTGTTCGCAGGTTTGAAAA 57.141 38.095 0.00 0.00 43.92 2.29
467 468 5.743026 TGTGAAATAAGAAACTGTTCGCA 57.257 34.783 0.00 0.00 38.90 5.10
468 469 6.691388 AGTTTGTGAAATAAGAAACTGTTCGC 59.309 34.615 0.00 0.00 37.28 4.70
469 470 8.614994 AAGTTTGTGAAATAAGAAACTGTTCG 57.385 30.769 0.00 0.00 38.38 3.95
472 473 9.921637 TCAAAAGTTTGTGAAATAAGAAACTGT 57.078 25.926 3.82 0.00 38.38 3.55
507 508 7.543172 GGTAGAAAGAAAACCAGAAACGTTTTT 59.457 33.333 15.89 6.62 42.08 1.94
508 509 7.031372 GGTAGAAAGAAAACCAGAAACGTTTT 58.969 34.615 15.89 2.49 44.09 2.43
509 510 6.376299 AGGTAGAAAGAAAACCAGAAACGTTT 59.624 34.615 14.57 14.57 35.64 3.60
510 511 5.884232 AGGTAGAAAGAAAACCAGAAACGTT 59.116 36.000 0.00 0.00 35.64 3.99
511 512 5.296035 CAGGTAGAAAGAAAACCAGAAACGT 59.704 40.000 0.00 0.00 35.64 3.99
512 513 5.296035 ACAGGTAGAAAGAAAACCAGAAACG 59.704 40.000 0.00 0.00 35.64 3.60
513 514 6.694877 ACAGGTAGAAAGAAAACCAGAAAC 57.305 37.500 0.00 0.00 35.64 2.78
514 515 6.769341 GGTACAGGTAGAAAGAAAACCAGAAA 59.231 38.462 0.00 0.00 35.64 2.52
515 516 6.126710 TGGTACAGGTAGAAAGAAAACCAGAA 60.127 38.462 0.00 0.00 35.64 3.02
516 517 5.367352 TGGTACAGGTAGAAAGAAAACCAGA 59.633 40.000 0.00 0.00 35.64 3.86
517 518 5.617252 TGGTACAGGTAGAAAGAAAACCAG 58.383 41.667 0.00 0.00 35.64 4.00
518 519 5.633655 TGGTACAGGTAGAAAGAAAACCA 57.366 39.130 0.00 0.00 35.64 3.67
519 520 6.555812 CTTGGTACAGGTAGAAAGAAAACC 57.444 41.667 0.00 0.00 42.39 3.27
532 533 3.758554 CCCTGAATGAAACTTGGTACAGG 59.241 47.826 0.00 0.00 42.39 4.00
533 534 4.651778 TCCCTGAATGAAACTTGGTACAG 58.348 43.478 0.00 0.00 42.39 2.74
534 535 4.651778 CTCCCTGAATGAAACTTGGTACA 58.348 43.478 0.00 0.00 0.00 2.90
535 536 3.440522 GCTCCCTGAATGAAACTTGGTAC 59.559 47.826 0.00 0.00 0.00 3.34
536 537 3.330701 AGCTCCCTGAATGAAACTTGGTA 59.669 43.478 0.00 0.00 0.00 3.25
537 538 2.108952 AGCTCCCTGAATGAAACTTGGT 59.891 45.455 0.00 0.00 0.00 3.67
538 539 2.490903 CAGCTCCCTGAATGAAACTTGG 59.509 50.000 0.00 0.00 41.77 3.61
539 540 2.490903 CCAGCTCCCTGAATGAAACTTG 59.509 50.000 0.00 0.00 41.77 3.16
540 541 2.556114 CCCAGCTCCCTGAATGAAACTT 60.556 50.000 0.00 0.00 41.77 2.66
541 542 1.005215 CCCAGCTCCCTGAATGAAACT 59.995 52.381 0.00 0.00 41.77 2.66
542 543 1.467920 CCCAGCTCCCTGAATGAAAC 58.532 55.000 0.00 0.00 41.77 2.78
543 544 0.332632 CCCCAGCTCCCTGAATGAAA 59.667 55.000 0.00 0.00 41.77 2.69
544 545 1.574526 CCCCCAGCTCCCTGAATGAA 61.575 60.000 0.00 0.00 41.77 2.57
545 546 2.002977 CCCCCAGCTCCCTGAATGA 61.003 63.158 0.00 0.00 41.77 2.57
546 547 0.988145 TACCCCCAGCTCCCTGAATG 60.988 60.000 0.00 0.00 41.77 2.67
547 548 0.988678 GTACCCCCAGCTCCCTGAAT 60.989 60.000 0.00 0.00 41.77 2.57
548 549 1.615424 GTACCCCCAGCTCCCTGAA 60.615 63.158 0.00 0.00 41.77 3.02
549 550 2.040606 GTACCCCCAGCTCCCTGA 59.959 66.667 0.00 0.00 41.77 3.86
550 551 3.090532 GGTACCCCCAGCTCCCTG 61.091 72.222 0.00 0.00 38.85 4.45
551 552 3.293379 AGGTACCCCCAGCTCCCT 61.293 66.667 8.74 0.00 34.66 4.20
552 553 3.090532 CAGGTACCCCCAGCTCCC 61.091 72.222 8.74 0.00 34.66 4.30
553 554 3.090532 CCAGGTACCCCCAGCTCC 61.091 72.222 8.74 0.00 34.66 4.70
554 555 3.090532 CCCAGGTACCCCCAGCTC 61.091 72.222 8.74 0.00 34.66 4.09
570 571 3.497884 AATGCTCTATGGGCCGGCC 62.498 63.158 38.57 38.57 0.00 6.13
571 572 1.968540 GAATGCTCTATGGGCCGGC 60.969 63.158 21.18 21.18 0.00 6.13
572 573 0.886490 GTGAATGCTCTATGGGCCGG 60.886 60.000 0.00 0.00 0.00 6.13
573 574 1.224069 CGTGAATGCTCTATGGGCCG 61.224 60.000 0.00 0.00 0.00 6.13
574 575 0.179045 ACGTGAATGCTCTATGGGCC 60.179 55.000 0.00 0.00 0.00 5.80
575 576 0.940126 CACGTGAATGCTCTATGGGC 59.060 55.000 10.90 0.00 0.00 5.36
576 577 2.205074 GTCACGTGAATGCTCTATGGG 58.795 52.381 21.95 0.00 0.00 4.00
577 578 2.892374 TGTCACGTGAATGCTCTATGG 58.108 47.619 21.95 0.00 0.00 2.74
578 579 3.242220 GCTTGTCACGTGAATGCTCTATG 60.242 47.826 21.95 4.51 0.00 2.23
579 580 2.932614 GCTTGTCACGTGAATGCTCTAT 59.067 45.455 21.95 0.00 0.00 1.98
580 581 2.337583 GCTTGTCACGTGAATGCTCTA 58.662 47.619 21.95 3.43 0.00 2.43
581 582 1.151668 GCTTGTCACGTGAATGCTCT 58.848 50.000 21.95 0.00 0.00 4.09
582 583 0.179240 CGCTTGTCACGTGAATGCTC 60.179 55.000 21.95 8.07 0.00 4.26
583 584 1.862123 CGCTTGTCACGTGAATGCT 59.138 52.632 21.95 0.00 0.00 3.79
584 585 1.793613 GCGCTTGTCACGTGAATGC 60.794 57.895 21.95 21.53 0.00 3.56
585 586 1.154413 GGCGCTTGTCACGTGAATG 60.154 57.895 21.95 13.97 0.00 2.67
586 587 2.667318 CGGCGCTTGTCACGTGAAT 61.667 57.895 21.95 0.00 0.00 2.57
587 588 3.334751 CGGCGCTTGTCACGTGAA 61.335 61.111 21.95 4.55 0.00 3.18
588 589 3.567478 ATCGGCGCTTGTCACGTGA 62.567 57.895 15.76 15.76 0.00 4.35
589 590 1.348538 TAATCGGCGCTTGTCACGTG 61.349 55.000 9.94 9.94 0.00 4.49
590 591 1.076533 CTAATCGGCGCTTGTCACGT 61.077 55.000 7.64 0.00 0.00 4.49
591 592 1.631072 CTAATCGGCGCTTGTCACG 59.369 57.895 7.64 0.17 0.00 4.35
592 593 0.459585 TCCTAATCGGCGCTTGTCAC 60.460 55.000 7.64 0.00 0.00 3.67
593 594 0.179111 CTCCTAATCGGCGCTTGTCA 60.179 55.000 7.64 0.00 0.00 3.58
594 595 1.491505 GCTCCTAATCGGCGCTTGTC 61.492 60.000 7.64 0.00 40.41 3.18
595 596 1.521681 GCTCCTAATCGGCGCTTGT 60.522 57.895 7.64 0.00 40.41 3.16
596 597 2.247437 GGCTCCTAATCGGCGCTTG 61.247 63.158 7.64 0.00 43.17 4.01
597 598 2.109181 GGCTCCTAATCGGCGCTT 59.891 61.111 7.64 0.09 43.17 4.68
598 599 3.930012 GGGCTCCTAATCGGCGCT 61.930 66.667 7.64 0.00 43.17 5.92
599 600 3.750373 TTGGGCTCCTAATCGGCGC 62.750 63.158 0.00 0.00 42.89 6.53
600 601 0.746563 TTTTGGGCTCCTAATCGGCG 60.747 55.000 0.00 0.00 0.00 6.46
601 602 1.470051 TTTTTGGGCTCCTAATCGGC 58.530 50.000 0.00 0.00 0.00 5.54
620 621 2.488153 CGAAATTCGGGAGCTCCTTTTT 59.512 45.455 31.36 22.82 36.00 1.94
621 622 2.084546 CGAAATTCGGGAGCTCCTTTT 58.915 47.619 31.36 23.14 36.00 2.27
622 623 1.739067 CGAAATTCGGGAGCTCCTTT 58.261 50.000 31.36 22.89 36.00 3.11
623 624 3.460648 CGAAATTCGGGAGCTCCTT 57.539 52.632 31.36 17.88 36.00 3.36
633 634 0.179140 CATTGGGTGGCCGAAATTCG 60.179 55.000 8.62 8.62 40.07 3.34
634 635 0.460109 GCATTGGGTGGCCGAAATTC 60.460 55.000 0.00 0.00 0.00 2.17
635 636 1.596408 GCATTGGGTGGCCGAAATT 59.404 52.632 0.00 0.00 0.00 1.82
636 637 3.297904 GCATTGGGTGGCCGAAAT 58.702 55.556 0.00 0.00 0.00 2.17
643 644 1.042229 CACATATGGGCATTGGGTGG 58.958 55.000 7.80 0.00 0.00 4.61
644 645 1.042229 CCACATATGGGCATTGGGTG 58.958 55.000 7.80 0.00 43.04 4.61
645 646 3.537455 CCACATATGGGCATTGGGT 57.463 52.632 7.80 0.00 43.04 4.51
654 655 1.893808 GCTGACGGCCCACATATGG 60.894 63.158 7.80 0.00 46.81 2.74
655 656 0.464373 AAGCTGACGGCCCACATATG 60.464 55.000 1.62 0.00 43.05 1.78
656 657 0.179045 GAAGCTGACGGCCCACATAT 60.179 55.000 1.62 0.00 43.05 1.78
657 658 1.220749 GAAGCTGACGGCCCACATA 59.779 57.895 1.62 0.00 43.05 2.29
658 659 2.045926 GAAGCTGACGGCCCACAT 60.046 61.111 1.62 0.00 43.05 3.21
659 660 1.549243 TATGAAGCTGACGGCCCACA 61.549 55.000 1.62 1.40 43.05 4.17
660 661 0.811616 CTATGAAGCTGACGGCCCAC 60.812 60.000 1.62 0.00 43.05 4.61
661 662 1.522092 CTATGAAGCTGACGGCCCA 59.478 57.895 1.62 1.83 43.05 5.36
662 663 1.889573 GCTATGAAGCTGACGGCCC 60.890 63.158 1.62 0.00 45.85 5.80
663 664 3.724494 GCTATGAAGCTGACGGCC 58.276 61.111 1.62 0.00 45.85 6.13
680 681 2.949644 CAGGTTAAAGGGCCGAATTAGG 59.050 50.000 0.00 0.00 0.00 2.69
681 682 2.949644 CCAGGTTAAAGGGCCGAATTAG 59.050 50.000 0.00 0.00 0.00 1.73
682 683 2.946791 GCCAGGTTAAAGGGCCGAATTA 60.947 50.000 0.00 0.00 41.90 1.40
683 684 1.847328 CCAGGTTAAAGGGCCGAATT 58.153 50.000 0.00 0.00 0.00 2.17
684 685 0.683179 GCCAGGTTAAAGGGCCGAAT 60.683 55.000 0.00 0.00 41.90 3.34
685 686 1.303806 GCCAGGTTAAAGGGCCGAA 60.304 57.895 0.00 0.00 41.90 4.30
686 687 2.353573 GCCAGGTTAAAGGGCCGA 59.646 61.111 0.00 0.00 41.90 5.54
690 691 2.162681 CTTCACAGCCAGGTTAAAGGG 58.837 52.381 0.00 0.00 0.00 3.95
691 692 3.140325 TCTTCACAGCCAGGTTAAAGG 57.860 47.619 0.00 0.00 0.00 3.11
692 693 3.691609 GGATCTTCACAGCCAGGTTAAAG 59.308 47.826 0.00 0.00 0.00 1.85
693 694 3.686016 GGATCTTCACAGCCAGGTTAAA 58.314 45.455 0.00 0.00 0.00 1.52
694 695 2.354704 CGGATCTTCACAGCCAGGTTAA 60.355 50.000 0.00 0.00 0.00 2.01
695 696 1.207089 CGGATCTTCACAGCCAGGTTA 59.793 52.381 0.00 0.00 0.00 2.85
696 697 0.036010 CGGATCTTCACAGCCAGGTT 60.036 55.000 0.00 0.00 0.00 3.50
697 698 0.904865 TCGGATCTTCACAGCCAGGT 60.905 55.000 0.00 0.00 0.00 4.00
698 699 0.250234 TTCGGATCTTCACAGCCAGG 59.750 55.000 0.00 0.00 0.00 4.45
699 700 1.066573 AGTTCGGATCTTCACAGCCAG 60.067 52.381 0.00 0.00 0.00 4.85
700 701 0.976641 AGTTCGGATCTTCACAGCCA 59.023 50.000 0.00 0.00 0.00 4.75
701 702 1.646189 GAGTTCGGATCTTCACAGCC 58.354 55.000 0.00 0.00 0.00 4.85
702 703 1.135373 TCGAGTTCGGATCTTCACAGC 60.135 52.381 1.26 0.00 40.29 4.40
703 704 2.478709 CCTCGAGTTCGGATCTTCACAG 60.479 54.545 12.31 0.00 40.29 3.66
704 705 1.472878 CCTCGAGTTCGGATCTTCACA 59.527 52.381 12.31 0.00 40.29 3.58
705 706 1.202313 CCCTCGAGTTCGGATCTTCAC 60.202 57.143 12.31 0.00 40.29 3.18
706 707 1.103803 CCCTCGAGTTCGGATCTTCA 58.896 55.000 12.31 0.00 40.29 3.02
707 708 0.386113 CCCCTCGAGTTCGGATCTTC 59.614 60.000 12.31 0.00 40.29 2.87
708 709 0.324460 ACCCCTCGAGTTCGGATCTT 60.324 55.000 12.31 0.00 40.29 2.40
709 710 0.752376 GACCCCTCGAGTTCGGATCT 60.752 60.000 12.31 0.00 40.29 2.75
710 711 1.734748 GACCCCTCGAGTTCGGATC 59.265 63.158 12.31 0.00 40.29 3.36
711 712 2.119655 CGACCCCTCGAGTTCGGAT 61.120 63.158 12.31 0.00 43.06 4.18
712 713 2.749044 CGACCCCTCGAGTTCGGA 60.749 66.667 12.31 0.00 43.06 4.55
713 714 3.048941 GACGACCCCTCGAGTTCGG 62.049 68.421 23.90 17.08 43.06 4.30
714 715 2.330372 TGACGACCCCTCGAGTTCG 61.330 63.158 20.54 20.54 43.06 3.95
715 716 1.212229 GTGACGACCCCTCGAGTTC 59.788 63.158 12.31 3.85 43.06 3.01
716 717 1.228490 AGTGACGACCCCTCGAGTT 60.228 57.895 12.31 0.00 43.06 3.01
717 718 1.972223 CAGTGACGACCCCTCGAGT 60.972 63.158 12.31 0.00 43.06 4.18
718 719 2.701780 CCAGTGACGACCCCTCGAG 61.702 68.421 5.13 5.13 43.06 4.04
719 720 2.675423 CCAGTGACGACCCCTCGA 60.675 66.667 0.00 0.00 43.06 4.04
720 721 3.760035 CCCAGTGACGACCCCTCG 61.760 72.222 0.00 0.00 46.06 4.63
721 722 0.686769 ATACCCAGTGACGACCCCTC 60.687 60.000 0.00 0.00 0.00 4.30
722 723 0.632835 TATACCCAGTGACGACCCCT 59.367 55.000 0.00 0.00 0.00 4.79
723 724 1.343465 CATATACCCAGTGACGACCCC 59.657 57.143 0.00 0.00 0.00 4.95
724 725 1.343465 CCATATACCCAGTGACGACCC 59.657 57.143 0.00 0.00 0.00 4.46
725 726 1.343465 CCCATATACCCAGTGACGACC 59.657 57.143 0.00 0.00 0.00 4.79
726 727 1.343465 CCCCATATACCCAGTGACGAC 59.657 57.143 0.00 0.00 0.00 4.34
727 728 1.218450 TCCCCATATACCCAGTGACGA 59.782 52.381 0.00 0.00 0.00 4.20
728 729 1.712056 TCCCCATATACCCAGTGACG 58.288 55.000 0.00 0.00 0.00 4.35
729 730 3.046374 AGTTCCCCATATACCCAGTGAC 58.954 50.000 0.00 0.00 0.00 3.67
730 731 3.051341 AGAGTTCCCCATATACCCAGTGA 60.051 47.826 0.00 0.00 0.00 3.41
731 732 3.318313 AGAGTTCCCCATATACCCAGTG 58.682 50.000 0.00 0.00 0.00 3.66
732 733 3.588569 GAGAGTTCCCCATATACCCAGT 58.411 50.000 0.00 0.00 0.00 4.00
733 734 2.907042 GGAGAGTTCCCCATATACCCAG 59.093 54.545 0.00 0.00 37.53 4.45
734 735 2.758640 CGGAGAGTTCCCCATATACCCA 60.759 54.545 0.00 0.00 40.67 4.51
735 736 1.900486 CGGAGAGTTCCCCATATACCC 59.100 57.143 0.00 0.00 40.67 3.69
736 737 1.900486 CCGGAGAGTTCCCCATATACC 59.100 57.143 0.00 0.00 40.67 2.73
737 738 2.826725 CTCCGGAGAGTTCCCCATATAC 59.173 54.545 28.21 0.00 40.67 1.47
738 739 2.720254 TCTCCGGAGAGTTCCCCATATA 59.280 50.000 30.49 3.03 40.67 0.86
739 740 1.503784 TCTCCGGAGAGTTCCCCATAT 59.496 52.381 30.49 0.00 40.67 1.78
740 741 0.931468 TCTCCGGAGAGTTCCCCATA 59.069 55.000 30.49 3.84 40.67 2.74
741 742 0.042731 TTCTCCGGAGAGTTCCCCAT 59.957 55.000 31.81 0.00 40.67 4.00
742 743 0.178915 TTTCTCCGGAGAGTTCCCCA 60.179 55.000 31.81 14.68 40.67 4.96
743 744 0.981943 TTTTCTCCGGAGAGTTCCCC 59.018 55.000 31.81 0.00 40.67 4.81
744 745 2.633488 CATTTTCTCCGGAGAGTTCCC 58.367 52.381 31.81 0.00 40.67 3.97
745 746 2.236395 TCCATTTTCTCCGGAGAGTTCC 59.764 50.000 31.81 0.00 41.26 3.62
746 747 3.611766 TCCATTTTCTCCGGAGAGTTC 57.388 47.619 31.81 0.00 41.26 3.01
751 752 3.055094 TCTTTCCTCCATTTTCTCCGGAG 60.055 47.826 26.32 26.32 45.02 4.63
752 753 2.910319 TCTTTCCTCCATTTTCTCCGGA 59.090 45.455 2.93 2.93 0.00 5.14
753 754 3.350219 TCTTTCCTCCATTTTCTCCGG 57.650 47.619 0.00 0.00 0.00 5.14
754 755 5.241728 AGTTTTCTTTCCTCCATTTTCTCCG 59.758 40.000 0.00 0.00 0.00 4.63
755 756 6.265422 TCAGTTTTCTTTCCTCCATTTTCTCC 59.735 38.462 0.00 0.00 0.00 3.71
756 757 7.229506 TCTCAGTTTTCTTTCCTCCATTTTCTC 59.770 37.037 0.00 0.00 0.00 2.87
757 758 7.062957 TCTCAGTTTTCTTTCCTCCATTTTCT 58.937 34.615 0.00 0.00 0.00 2.52
758 759 7.277174 TCTCAGTTTTCTTTCCTCCATTTTC 57.723 36.000 0.00 0.00 0.00 2.29
759 760 7.343057 ACTTCTCAGTTTTCTTTCCTCCATTTT 59.657 33.333 0.00 0.00 0.00 1.82
760 761 6.836007 ACTTCTCAGTTTTCTTTCCTCCATTT 59.164 34.615 0.00 0.00 0.00 2.32
761 762 6.368805 ACTTCTCAGTTTTCTTTCCTCCATT 58.631 36.000 0.00 0.00 0.00 3.16
762 763 5.946486 ACTTCTCAGTTTTCTTTCCTCCAT 58.054 37.500 0.00 0.00 0.00 3.41
763 764 5.368989 GACTTCTCAGTTTTCTTTCCTCCA 58.631 41.667 0.00 0.00 31.22 3.86
764 765 4.449405 CGACTTCTCAGTTTTCTTTCCTCC 59.551 45.833 0.00 0.00 31.22 4.30
765 766 4.449405 CCGACTTCTCAGTTTTCTTTCCTC 59.551 45.833 0.00 0.00 31.22 3.71
766 767 4.101119 TCCGACTTCTCAGTTTTCTTTCCT 59.899 41.667 0.00 0.00 31.22 3.36
767 768 4.377897 TCCGACTTCTCAGTTTTCTTTCC 58.622 43.478 0.00 0.00 31.22 3.13
768 769 5.556570 CGTTCCGACTTCTCAGTTTTCTTTC 60.557 44.000 0.00 0.00 31.22 2.62
769 770 4.270325 CGTTCCGACTTCTCAGTTTTCTTT 59.730 41.667 0.00 0.00 31.22 2.52
770 771 3.802685 CGTTCCGACTTCTCAGTTTTCTT 59.197 43.478 0.00 0.00 31.22 2.52
771 772 3.381949 CGTTCCGACTTCTCAGTTTTCT 58.618 45.455 0.00 0.00 31.22 2.52
772 773 2.475487 CCGTTCCGACTTCTCAGTTTTC 59.525 50.000 0.00 0.00 31.22 2.29
773 774 2.480845 CCGTTCCGACTTCTCAGTTTT 58.519 47.619 0.00 0.00 31.22 2.43
774 775 1.872653 GCCGTTCCGACTTCTCAGTTT 60.873 52.381 0.00 0.00 31.22 2.66
775 776 0.319641 GCCGTTCCGACTTCTCAGTT 60.320 55.000 0.00 0.00 31.22 3.16
776 777 1.289380 GCCGTTCCGACTTCTCAGT 59.711 57.895 0.00 0.00 35.17 3.41
777 778 1.446272 GGCCGTTCCGACTTCTCAG 60.446 63.158 0.00 0.00 0.00 3.35
778 779 2.154798 CTGGCCGTTCCGACTTCTCA 62.155 60.000 0.00 0.00 37.80 3.27
779 780 1.446272 CTGGCCGTTCCGACTTCTC 60.446 63.158 0.00 0.00 37.80 2.87
780 781 2.657237 CTGGCCGTTCCGACTTCT 59.343 61.111 0.00 0.00 37.80 2.85
781 782 3.119096 GCTGGCCGTTCCGACTTC 61.119 66.667 0.00 0.00 37.80 3.01
828 829 4.430765 AGTTGTAGCGTCGGGGCG 62.431 66.667 0.00 0.00 38.18 6.13
829 830 2.508663 GAGTTGTAGCGTCGGGGC 60.509 66.667 0.00 0.00 0.00 5.80
830 831 2.183555 GGAGTTGTAGCGTCGGGG 59.816 66.667 0.00 0.00 0.00 5.73
831 832 2.183555 GGGAGTTGTAGCGTCGGG 59.816 66.667 0.00 0.00 0.00 5.14
832 833 2.162338 TTGGGGAGTTGTAGCGTCGG 62.162 60.000 0.00 0.00 0.00 4.79
833 834 1.012486 GTTGGGGAGTTGTAGCGTCG 61.012 60.000 0.00 0.00 0.00 5.12
834 835 1.012486 CGTTGGGGAGTTGTAGCGTC 61.012 60.000 0.00 0.00 0.00 5.19
835 836 1.005394 CGTTGGGGAGTTGTAGCGT 60.005 57.895 0.00 0.00 0.00 5.07
836 837 2.388232 GCGTTGGGGAGTTGTAGCG 61.388 63.158 0.00 0.00 0.00 4.26
837 838 2.388232 CGCGTTGGGGAGTTGTAGC 61.388 63.158 0.00 0.00 0.00 3.58
838 839 2.388232 GCGCGTTGGGGAGTTGTAG 61.388 63.158 8.43 0.00 0.00 2.74
839 840 2.357760 GCGCGTTGGGGAGTTGTA 60.358 61.111 8.43 0.00 0.00 2.41
857 858 3.068729 GAATGCGAGGGGGCTTTGC 62.069 63.158 0.00 0.00 31.34 3.68
858 859 2.418083 GGAATGCGAGGGGGCTTTG 61.418 63.158 0.00 0.00 31.34 2.77
859 860 2.043953 GGAATGCGAGGGGGCTTT 60.044 61.111 0.00 0.00 33.55 3.51
860 861 4.489771 CGGAATGCGAGGGGGCTT 62.490 66.667 0.00 0.00 0.00 4.35
862 863 4.918201 CTCGGAATGCGAGGGGGC 62.918 72.222 16.44 0.00 0.00 5.80
863 864 4.241555 CCTCGGAATGCGAGGGGG 62.242 72.222 31.41 10.78 46.63 5.40
867 868 2.202932 CCCACCTCGGAATGCGAG 60.203 66.667 17.24 17.24 36.56 5.03
868 869 2.682136 TCCCACCTCGGAATGCGA 60.682 61.111 0.00 0.00 36.56 5.10
869 870 2.202932 CTCCCACCTCGGAATGCG 60.203 66.667 0.00 0.00 36.56 4.73
870 871 2.514824 GCTCCCACCTCGGAATGC 60.515 66.667 0.00 0.00 36.56 3.56
871 872 2.190578 GGCTCCCACCTCGGAATG 59.809 66.667 0.00 0.00 36.56 2.67
872 873 3.090532 GGGCTCCCACCTCGGAAT 61.091 66.667 0.00 0.00 36.56 3.01
884 885 4.496336 ATGAAGCGGCTGGGGCTC 62.496 66.667 1.81 0.00 40.53 4.70
885 886 4.496336 GATGAAGCGGCTGGGGCT 62.496 66.667 1.81 0.00 44.02 5.19
886 887 4.496336 AGATGAAGCGGCTGGGGC 62.496 66.667 1.81 0.00 37.82 5.80
887 888 2.203126 GAGATGAAGCGGCTGGGG 60.203 66.667 1.81 0.00 0.00 4.96
888 889 2.203126 GGAGATGAAGCGGCTGGG 60.203 66.667 1.81 0.00 0.00 4.45
889 890 2.203126 GGGAGATGAAGCGGCTGG 60.203 66.667 1.81 0.00 0.00 4.85
890 891 2.203126 GGGGAGATGAAGCGGCTG 60.203 66.667 1.81 0.00 0.00 4.85
891 892 3.854669 CGGGGAGATGAAGCGGCT 61.855 66.667 0.00 0.00 0.00 5.52
893 894 4.918201 GGCGGGGAGATGAAGCGG 62.918 72.222 0.00 0.00 0.00 5.52
894 895 4.918201 GGGCGGGGAGATGAAGCG 62.918 72.222 0.00 0.00 0.00 4.68
895 896 2.837031 TTTGGGCGGGGAGATGAAGC 62.837 60.000 0.00 0.00 0.00 3.86
896 897 1.032114 GTTTGGGCGGGGAGATGAAG 61.032 60.000 0.00 0.00 0.00 3.02
897 898 1.001393 GTTTGGGCGGGGAGATGAA 60.001 57.895 0.00 0.00 0.00 2.57
898 899 2.674754 GTTTGGGCGGGGAGATGA 59.325 61.111 0.00 0.00 0.00 2.92
899 900 2.440247 GGTTTGGGCGGGGAGATG 60.440 66.667 0.00 0.00 0.00 2.90
900 901 2.211468 GAAGGTTTGGGCGGGGAGAT 62.211 60.000 0.00 0.00 0.00 2.75
901 902 2.856988 AAGGTTTGGGCGGGGAGA 60.857 61.111 0.00 0.00 0.00 3.71
902 903 2.361230 GAAGGTTTGGGCGGGGAG 60.361 66.667 0.00 0.00 0.00 4.30
903 904 3.974293 GGAAGGTTTGGGCGGGGA 61.974 66.667 0.00 0.00 0.00 4.81
906 907 4.293671 TGGGGAAGGTTTGGGCGG 62.294 66.667 0.00 0.00 0.00 6.13
907 908 2.989253 GTGGGGAAGGTTTGGGCG 60.989 66.667 0.00 0.00 0.00 6.13
908 909 2.603473 GGTGGGGAAGGTTTGGGC 60.603 66.667 0.00 0.00 0.00 5.36
909 910 0.707616 TATGGTGGGGAAGGTTTGGG 59.292 55.000 0.00 0.00 0.00 4.12
910 911 2.614134 TTATGGTGGGGAAGGTTTGG 57.386 50.000 0.00 0.00 0.00 3.28
911 912 3.130340 CGATTTATGGTGGGGAAGGTTTG 59.870 47.826 0.00 0.00 0.00 2.93
912 913 3.010808 TCGATTTATGGTGGGGAAGGTTT 59.989 43.478 0.00 0.00 0.00 3.27
913 914 2.578940 TCGATTTATGGTGGGGAAGGTT 59.421 45.455 0.00 0.00 0.00 3.50
914 915 2.092592 GTCGATTTATGGTGGGGAAGGT 60.093 50.000 0.00 0.00 0.00 3.50
915 916 2.572290 GTCGATTTATGGTGGGGAAGG 58.428 52.381 0.00 0.00 0.00 3.46
916 917 2.572290 GGTCGATTTATGGTGGGGAAG 58.428 52.381 0.00 0.00 0.00 3.46
917 918 1.213430 GGGTCGATTTATGGTGGGGAA 59.787 52.381 0.00 0.00 0.00 3.97
918 919 0.841289 GGGTCGATTTATGGTGGGGA 59.159 55.000 0.00 0.00 0.00 4.81
919 920 0.534203 CGGGTCGATTTATGGTGGGG 60.534 60.000 0.00 0.00 0.00 4.96
920 921 1.164041 GCGGGTCGATTTATGGTGGG 61.164 60.000 0.00 0.00 0.00 4.61
921 922 1.164041 GGCGGGTCGATTTATGGTGG 61.164 60.000 0.00 0.00 0.00 4.61
922 923 0.179056 AGGCGGGTCGATTTATGGTG 60.179 55.000 0.00 0.00 0.00 4.17
923 924 0.106149 GAGGCGGGTCGATTTATGGT 59.894 55.000 0.00 0.00 0.00 3.55
924 925 0.602905 GGAGGCGGGTCGATTTATGG 60.603 60.000 0.00 0.00 0.00 2.74
925 926 0.602905 GGGAGGCGGGTCGATTTATG 60.603 60.000 0.00 0.00 0.00 1.90
926 927 1.752833 GGGAGGCGGGTCGATTTAT 59.247 57.895 0.00 0.00 0.00 1.40
927 928 2.788640 CGGGAGGCGGGTCGATTTA 61.789 63.158 0.00 0.00 0.00 1.40
928 929 4.157120 CGGGAGGCGGGTCGATTT 62.157 66.667 0.00 0.00 0.00 2.17
940 941 1.376037 GTGCTGGTTCTTCCGGGAG 60.376 63.158 2.10 2.10 43.54 4.30
941 942 2.747686 GTGCTGGTTCTTCCGGGA 59.252 61.111 0.00 0.00 42.62 5.14
942 943 2.742372 CGTGCTGGTTCTTCCGGG 60.742 66.667 0.00 0.00 42.62 5.73
943 944 3.423154 GCGTGCTGGTTCTTCCGG 61.423 66.667 0.00 0.00 45.06 5.14
944 945 2.357517 AGCGTGCTGGTTCTTCCG 60.358 61.111 0.00 0.00 39.52 4.30
945 946 2.035442 GGAGCGTGCTGGTTCTTCC 61.035 63.158 0.00 0.00 0.00 3.46
946 947 1.004440 AGGAGCGTGCTGGTTCTTC 60.004 57.895 0.00 0.00 25.51 2.87
947 948 1.004440 GAGGAGCGTGCTGGTTCTT 60.004 57.895 0.00 0.00 32.74 2.52
948 949 2.659610 GAGGAGCGTGCTGGTTCT 59.340 61.111 0.00 0.00 36.32 3.01
949 950 2.435059 GGAGGAGCGTGCTGGTTC 60.435 66.667 0.00 0.00 0.00 3.62
950 951 2.925170 AGGAGGAGCGTGCTGGTT 60.925 61.111 0.00 0.00 0.00 3.67
951 952 3.386237 GAGGAGGAGCGTGCTGGT 61.386 66.667 0.00 0.00 0.00 4.00
952 953 3.385384 TGAGGAGGAGCGTGCTGG 61.385 66.667 0.00 0.00 0.00 4.85
953 954 2.125753 GTGAGGAGGAGCGTGCTG 60.126 66.667 0.00 0.00 0.00 4.41
954 955 3.386237 GGTGAGGAGGAGCGTGCT 61.386 66.667 0.00 0.00 0.00 4.40
955 956 3.363844 GAGGTGAGGAGGAGCGTGC 62.364 68.421 0.00 0.00 0.00 5.34
956 957 2.716017 GGAGGTGAGGAGGAGCGTG 61.716 68.421 0.00 0.00 0.00 5.34
957 958 2.363147 GGAGGTGAGGAGGAGCGT 60.363 66.667 0.00 0.00 0.00 5.07
958 959 3.151022 GGGAGGTGAGGAGGAGCG 61.151 72.222 0.00 0.00 0.00 5.03
959 960 2.063378 CAGGGAGGTGAGGAGGAGC 61.063 68.421 0.00 0.00 0.00 4.70
960 961 2.063378 GCAGGGAGGTGAGGAGGAG 61.063 68.421 0.00 0.00 0.00 3.69
961 962 2.039624 GCAGGGAGGTGAGGAGGA 59.960 66.667 0.00 0.00 0.00 3.71
962 963 3.086600 GGCAGGGAGGTGAGGAGG 61.087 72.222 0.00 0.00 0.00 4.30
963 964 2.284921 TGGCAGGGAGGTGAGGAG 60.285 66.667 0.00 0.00 0.00 3.69
964 965 2.607750 GTGGCAGGGAGGTGAGGA 60.608 66.667 0.00 0.00 0.00 3.71
965 966 3.721706 GGTGGCAGGGAGGTGAGG 61.722 72.222 0.00 0.00 0.00 3.86
966 967 3.721706 GGGTGGCAGGGAGGTGAG 61.722 72.222 0.00 0.00 0.00 3.51
981 982 4.860881 TCTGGAGCTAGGGCGGGG 62.861 72.222 0.00 0.00 44.37 5.73
982 983 3.541713 GTCTGGAGCTAGGGCGGG 61.542 72.222 0.00 0.00 44.37 6.13
983 984 2.136878 ATGTCTGGAGCTAGGGCGG 61.137 63.158 0.00 0.00 44.37 6.13
984 985 1.068753 CATGTCTGGAGCTAGGGCG 59.931 63.158 0.00 0.00 44.37 6.13
985 986 1.227793 GCATGTCTGGAGCTAGGGC 60.228 63.158 0.00 0.00 39.06 5.19
986 987 1.449353 GGCATGTCTGGAGCTAGGG 59.551 63.158 0.00 0.00 0.00 3.53
987 988 1.068753 CGGCATGTCTGGAGCTAGG 59.931 63.158 0.00 0.00 0.00 3.02
988 989 0.031857 CTCGGCATGTCTGGAGCTAG 59.968 60.000 0.00 0.00 0.00 3.42
989 990 2.021068 GCTCGGCATGTCTGGAGCTA 62.021 60.000 16.97 0.00 46.33 3.32
990 991 2.898738 CTCGGCATGTCTGGAGCT 59.101 61.111 0.00 0.00 0.00 4.09
991 992 2.894387 GCTCGGCATGTCTGGAGC 60.894 66.667 10.78 10.78 44.24 4.70
992 993 1.227205 GAGCTCGGCATGTCTGGAG 60.227 63.158 0.00 0.00 0.00 3.86
993 994 1.543944 TTGAGCTCGGCATGTCTGGA 61.544 55.000 9.64 0.00 0.00 3.86
994 995 0.674581 TTTGAGCTCGGCATGTCTGG 60.675 55.000 9.64 0.00 0.00 3.86
995 996 0.725686 CTTTGAGCTCGGCATGTCTG 59.274 55.000 9.64 0.00 0.00 3.51
996 997 0.610174 TCTTTGAGCTCGGCATGTCT 59.390 50.000 9.64 0.00 0.00 3.41
997 998 1.396301 CTTCTTTGAGCTCGGCATGTC 59.604 52.381 9.64 0.00 0.00 3.06
998 999 1.002430 TCTTCTTTGAGCTCGGCATGT 59.998 47.619 9.64 0.00 0.00 3.21
999 1000 1.730501 TCTTCTTTGAGCTCGGCATG 58.269 50.000 9.64 0.00 0.00 4.06
1000 1001 2.079925 GTTCTTCTTTGAGCTCGGCAT 58.920 47.619 9.64 0.00 0.00 4.40
1001 1002 1.202639 TGTTCTTCTTTGAGCTCGGCA 60.203 47.619 9.64 0.00 0.00 5.69
1002 1003 1.512926 TGTTCTTCTTTGAGCTCGGC 58.487 50.000 9.64 0.00 0.00 5.54
1003 1004 3.608008 GCTTTGTTCTTCTTTGAGCTCGG 60.608 47.826 9.64 1.97 0.00 4.63
1004 1005 3.249559 AGCTTTGTTCTTCTTTGAGCTCG 59.750 43.478 9.64 0.00 34.13 5.03
1005 1006 4.827304 AGCTTTGTTCTTCTTTGAGCTC 57.173 40.909 6.82 6.82 34.13 4.09
1006 1007 4.641989 TGAAGCTTTGTTCTTCTTTGAGCT 59.358 37.500 0.00 0.00 40.31 4.09
1007 1008 4.925068 TGAAGCTTTGTTCTTCTTTGAGC 58.075 39.130 0.00 0.00 40.31 4.26
1008 1009 6.038050 AGTCTGAAGCTTTGTTCTTCTTTGAG 59.962 38.462 0.00 0.00 40.31 3.02
1009 1010 5.882557 AGTCTGAAGCTTTGTTCTTCTTTGA 59.117 36.000 0.00 0.00 40.31 2.69
1010 1011 6.129053 AGTCTGAAGCTTTGTTCTTCTTTG 57.871 37.500 0.00 0.00 40.31 2.77
1011 1012 5.007136 CGAGTCTGAAGCTTTGTTCTTCTTT 59.993 40.000 0.00 0.00 40.31 2.52
1012 1013 4.509600 CGAGTCTGAAGCTTTGTTCTTCTT 59.490 41.667 0.00 0.00 40.31 2.52
1013 1014 4.054671 CGAGTCTGAAGCTTTGTTCTTCT 58.945 43.478 0.00 0.00 40.31 2.85
1014 1015 3.804873 ACGAGTCTGAAGCTTTGTTCTTC 59.195 43.478 0.00 0.00 40.13 2.87
1015 1016 3.798202 ACGAGTCTGAAGCTTTGTTCTT 58.202 40.909 0.00 0.00 0.00 2.52
1016 1017 3.385577 GACGAGTCTGAAGCTTTGTTCT 58.614 45.455 0.00 0.00 0.00 3.01
1017 1018 2.476997 GGACGAGTCTGAAGCTTTGTTC 59.523 50.000 0.00 0.00 0.00 3.18
1018 1019 2.158957 TGGACGAGTCTGAAGCTTTGTT 60.159 45.455 0.00 0.00 0.00 2.83
1019 1020 1.412710 TGGACGAGTCTGAAGCTTTGT 59.587 47.619 0.00 0.00 0.00 2.83
1020 1021 2.154854 TGGACGAGTCTGAAGCTTTG 57.845 50.000 0.00 0.00 0.00 2.77
1021 1022 2.365617 TCTTGGACGAGTCTGAAGCTTT 59.634 45.455 0.00 0.00 0.00 3.51
1022 1023 1.964223 TCTTGGACGAGTCTGAAGCTT 59.036 47.619 0.00 0.00 0.00 3.74
1023 1024 1.621992 TCTTGGACGAGTCTGAAGCT 58.378 50.000 3.09 0.00 0.00 3.74
1024 1025 2.440539 TTCTTGGACGAGTCTGAAGC 57.559 50.000 3.09 0.00 0.00 3.86
1025 1026 4.420168 GAGATTCTTGGACGAGTCTGAAG 58.580 47.826 3.09 6.28 31.17 3.02
1026 1027 3.193691 GGAGATTCTTGGACGAGTCTGAA 59.806 47.826 3.09 6.33 31.17 3.02
1027 1028 2.755655 GGAGATTCTTGGACGAGTCTGA 59.244 50.000 3.09 0.00 31.17 3.27
1028 1029 2.493675 TGGAGATTCTTGGACGAGTCTG 59.506 50.000 3.09 0.00 31.17 3.51
1029 1030 2.757868 CTGGAGATTCTTGGACGAGTCT 59.242 50.000 3.09 0.00 33.34 3.24
1030 1031 2.755655 TCTGGAGATTCTTGGACGAGTC 59.244 50.000 0.00 0.00 0.00 3.36
1031 1032 2.808919 TCTGGAGATTCTTGGACGAGT 58.191 47.619 0.00 0.00 0.00 4.18
1032 1033 3.492309 CCATCTGGAGATTCTTGGACGAG 60.492 52.174 0.00 0.00 37.39 4.18
1033 1034 2.432146 CCATCTGGAGATTCTTGGACGA 59.568 50.000 0.00 0.00 37.39 4.20
1034 1035 2.169352 ACCATCTGGAGATTCTTGGACG 59.831 50.000 2.55 0.00 38.94 4.79
1035 1036 3.198635 TCACCATCTGGAGATTCTTGGAC 59.801 47.826 2.55 0.00 38.94 4.02
1036 1037 3.453868 TCACCATCTGGAGATTCTTGGA 58.546 45.455 2.55 0.00 38.94 3.53
1037 1038 3.920231 TCACCATCTGGAGATTCTTGG 57.080 47.619 2.55 0.66 38.94 3.61
1038 1039 5.032327 TGATCACCATCTGGAGATTCTTG 57.968 43.478 10.01 0.00 43.91 3.02
1039 1040 4.444591 GCTGATCACCATCTGGAGATTCTT 60.445 45.833 10.01 0.00 43.91 2.52
1040 1041 3.071312 GCTGATCACCATCTGGAGATTCT 59.929 47.826 10.01 0.00 43.91 2.40
1041 1042 3.401182 GCTGATCACCATCTGGAGATTC 58.599 50.000 10.01 5.35 43.91 2.52
1042 1043 2.224233 CGCTGATCACCATCTGGAGATT 60.224 50.000 10.01 0.00 43.91 2.40
1043 1044 1.343789 CGCTGATCACCATCTGGAGAT 59.656 52.381 8.64 8.64 46.01 2.75
1044 1045 0.749049 CGCTGATCACCATCTGGAGA 59.251 55.000 2.55 0.44 39.09 3.71
1107 1108 2.126385 TTGTACGACGCGGCGATT 60.126 55.556 44.35 23.74 34.83 3.34
1143 1144 3.733960 CGGTCCACAGCGTCGAGA 61.734 66.667 0.00 0.00 38.76 4.04
1215 1217 3.680786 CTGGACTGGTCGCCGACA 61.681 66.667 20.08 4.45 33.68 4.35
1557 1562 1.589196 GTAGATGTCGTCGGGCTGC 60.589 63.158 0.00 0.00 0.00 5.25
1827 1832 1.033574 CCTGGTCATAGGTCTCGTCC 58.966 60.000 0.00 0.00 32.99 4.79
1851 1856 2.909504 ACAGCTTCTCCTCCTCTACA 57.090 50.000 0.00 0.00 0.00 2.74
1883 1888 2.382882 TCTCGATCTTGGACAGCAGAT 58.617 47.619 0.00 0.00 32.11 2.90
1884 1889 1.839424 TCTCGATCTTGGACAGCAGA 58.161 50.000 0.00 0.00 0.00 4.26
1982 1987 1.267235 CGTTGATCTGCTTGACGATGC 60.267 52.381 0.00 0.00 35.90 3.91
2378 2394 9.509956 AGGTACAGAAGCTATACATAGTCTAAG 57.490 37.037 0.00 0.00 32.98 2.18
2484 2500 7.007723 ACCATGTAAGACAATAAGTTTTGGGA 58.992 34.615 0.00 0.00 0.00 4.37
2725 2741 2.202932 CGATGCTCCTTGTCCCGG 60.203 66.667 0.00 0.00 0.00 5.73
3413 3430 3.230134 AGTCAAGCTTCTGACACTCTCT 58.770 45.455 18.40 0.00 46.81 3.10
4546 4564 0.110678 TCACCTCACGACTGGACTCT 59.889 55.000 0.00 0.00 0.00 3.24
6203 6221 1.092921 AAACCGCGAGCAACAAGTCA 61.093 50.000 8.23 0.00 0.00 3.41
6438 6456 7.615365 TCAAACCATATAGTGCTTTGGAAAGAT 59.385 33.333 3.23 0.00 38.28 2.40
6776 6794 1.138464 CTTCAGCATGCCAGCTCTCTA 59.862 52.381 15.66 0.00 44.54 2.43
7519 7537 9.543231 TCTAAAGAACTGAGAAGGGTAAGATTA 57.457 33.333 0.00 0.00 0.00 1.75
7746 7764 1.815003 GCATGCTGCAGAACTACCTTT 59.185 47.619 20.43 0.00 44.26 3.11
7896 7914 7.861629 ACCAAGTCTTCATGTATTCAGGATTA 58.138 34.615 0.00 0.00 34.35 1.75
7936 7954 4.081420 AGCGTCCATAAACTTCTCATGACT 60.081 41.667 0.00 0.00 0.00 3.41
8077 8095 0.824759 ATCTTCCAGTAGGCGGTCAC 59.175 55.000 0.00 0.00 33.74 3.67
8169 8187 0.172352 CAGACAGTTCCCTCTCGAGC 59.828 60.000 7.81 0.00 0.00 5.03
8196 8214 1.327303 CTGCCAGCTTGTTACCCAAA 58.673 50.000 0.00 0.00 31.20 3.28
8202 8220 1.074775 CACCCCTGCCAGCTTGTTA 59.925 57.895 0.00 0.00 0.00 2.41
8337 8355 0.174845 CCTAGATTTCACCCGACGCA 59.825 55.000 0.00 0.00 0.00 5.24
8343 8361 3.684697 GCCCAACTACCTAGATTTCACCC 60.685 52.174 0.00 0.00 0.00 4.61
8360 8378 0.182299 TCACACACACTGATGCCCAA 59.818 50.000 0.00 0.00 0.00 4.12
8371 8389 2.319025 TCCTAGGGACATCACACACA 57.681 50.000 9.46 0.00 0.00 3.72
8387 8405 2.304180 CACCATCCAGAAGACAAGTCCT 59.696 50.000 0.00 0.00 0.00 3.85
8389 8407 2.079925 GCACCATCCAGAAGACAAGTC 58.920 52.381 0.00 0.00 0.00 3.01
8390 8408 1.609061 CGCACCATCCAGAAGACAAGT 60.609 52.381 0.00 0.00 0.00 3.16
8391 8409 1.081892 CGCACCATCCAGAAGACAAG 58.918 55.000 0.00 0.00 0.00 3.16
8395 8413 1.471501 CGAATCGCACCATCCAGAAGA 60.472 52.381 0.00 0.00 0.00 2.87
8396 8414 0.933097 CGAATCGCACCATCCAGAAG 59.067 55.000 0.00 0.00 0.00 2.85
8399 8454 1.153369 ACCGAATCGCACCATCCAG 60.153 57.895 0.00 0.00 0.00 3.86
8411 8466 4.342862 AGCATAGCATAGTTCACCGAAT 57.657 40.909 0.00 0.00 0.00 3.34
8414 8469 3.457234 TGAAGCATAGCATAGTTCACCG 58.543 45.455 0.00 0.00 0.00 4.94
8419 8474 6.118170 ACTGAACATGAAGCATAGCATAGTT 58.882 36.000 0.00 0.00 0.00 2.24
8420 8475 5.678583 ACTGAACATGAAGCATAGCATAGT 58.321 37.500 0.00 0.00 0.00 2.12
8421 8476 6.615264 AACTGAACATGAAGCATAGCATAG 57.385 37.500 0.00 0.00 0.00 2.23
8468 8524 9.173939 GAAAATGCATAACATAACTGAGCATAC 57.826 33.333 0.00 0.00 40.00 2.39
8494 8550 8.824781 CATCAGTCATCACCAGAAATACTAAAG 58.175 37.037 0.00 0.00 0.00 1.85
8497 8553 6.127083 TGCATCAGTCATCACCAGAAATACTA 60.127 38.462 0.00 0.00 0.00 1.82
8502 8558 3.244665 ACTGCATCAGTCATCACCAGAAA 60.245 43.478 0.00 0.00 41.21 2.52
8505 8561 2.007608 CACTGCATCAGTCATCACCAG 58.992 52.381 0.00 0.00 43.43 4.00
8527 8583 7.134815 GCTAACATAGAACCACAGCATAATTG 58.865 38.462 0.00 0.00 0.00 2.32
8530 8586 5.739959 TGCTAACATAGAACCACAGCATAA 58.260 37.500 0.00 0.00 32.94 1.90
8577 8633 9.023962 AGCAAGTTTGTGAGGAATTAATAATGA 57.976 29.630 0.00 0.00 0.00 2.57
8593 8649 6.714810 TCCATAACTGAACATAGCAAGTTTGT 59.285 34.615 0.00 0.00 0.00 2.83
8602 8658 9.416794 GACAGTATGATCCATAACTGAACATAG 57.583 37.037 16.24 0.00 39.69 2.23
8671 8727 6.958767 ACCTACTATAAAAACTGTGGATGCT 58.041 36.000 0.00 0.00 0.00 3.79
8739 8795 0.685097 AGCTACCTCGTTTGCCTTGA 59.315 50.000 0.00 0.00 0.00 3.02
8748 8804 1.171308 TGCGAACTAAGCTACCTCGT 58.829 50.000 8.59 0.00 35.28 4.18
8755 8811 5.768317 TGCTTAAAAATTGCGAACTAAGCT 58.232 33.333 15.25 0.00 41.04 3.74
8757 8813 8.673275 CGATATGCTTAAAAATTGCGAACTAAG 58.327 33.333 0.00 0.00 0.00 2.18
8759 8815 7.690228 ACGATATGCTTAAAAATTGCGAACTA 58.310 30.769 0.00 0.00 0.00 2.24
8760 8816 6.551736 ACGATATGCTTAAAAATTGCGAACT 58.448 32.000 0.00 0.00 0.00 3.01
8761 8817 6.790336 ACGATATGCTTAAAAATTGCGAAC 57.210 33.333 0.00 0.00 0.00 3.95
8762 8818 7.690228 AGTACGATATGCTTAAAAATTGCGAA 58.310 30.769 0.00 0.00 0.00 4.70
8763 8819 7.241663 AGTACGATATGCTTAAAAATTGCGA 57.758 32.000 0.00 0.00 0.00 5.10
8765 8821 8.835467 TCAAGTACGATATGCTTAAAAATTGC 57.165 30.769 0.00 0.00 31.10 3.56
8767 8823 9.783256 GGTTCAAGTACGATATGCTTAAAAATT 57.217 29.630 0.00 0.00 31.10 1.82
8769 8825 8.325421 TGGTTCAAGTACGATATGCTTAAAAA 57.675 30.769 0.00 0.00 31.10 1.94
8780 8836 9.314321 CTAGTATGAAAATGGTTCAAGTACGAT 57.686 33.333 0.00 0.00 31.55 3.73
8795 8852 5.472137 GTGCCCTGTCAAACTAGTATGAAAA 59.528 40.000 0.00 0.00 0.00 2.29
8812 9577 1.281867 TCTTGGTATCTTGGTGCCCTG 59.718 52.381 0.00 0.00 0.00 4.45
8827 9597 4.670896 AATCCCAACAGTTGTTTCTTGG 57.329 40.909 12.42 5.24 35.83 3.61
8851 9621 8.993424 AGGTTCAGACTCTACATATAAAACCAT 58.007 33.333 0.00 0.00 35.90 3.55
8864 9634 5.140454 TGCATATGCTAGGTTCAGACTCTA 58.860 41.667 27.13 0.00 42.66 2.43
8867 9641 4.970860 ATGCATATGCTAGGTTCAGACT 57.029 40.909 27.13 0.00 42.66 3.24
8874 9648 5.611374 ACTCGTTTTATGCATATGCTAGGT 58.389 37.500 27.13 13.48 42.66 3.08
8881 9655 7.552687 TGGAGAAGAAACTCGTTTTATGCATAT 59.447 33.333 7.36 0.00 37.74 1.78
8884 9658 5.060506 TGGAGAAGAAACTCGTTTTATGCA 58.939 37.500 0.00 0.00 37.74 3.96
8885 9659 5.607119 TGGAGAAGAAACTCGTTTTATGC 57.393 39.130 0.00 0.00 37.74 3.14
8886 9660 5.179368 TGCTGGAGAAGAAACTCGTTTTATG 59.821 40.000 0.00 0.00 37.74 1.90
8893 9698 3.849911 TGTATGCTGGAGAAGAAACTCG 58.150 45.455 0.00 0.00 37.74 4.18
8931 9738 4.877378 TCTCGTGTTGTACCCTTTACAT 57.123 40.909 0.00 0.00 0.00 2.29
8934 9741 5.280654 ACTTTCTCGTGTTGTACCCTTTA 57.719 39.130 0.00 0.00 0.00 1.85
8948 9777 2.224209 ACTGTGGTTGGGTACTTTCTCG 60.224 50.000 0.00 0.00 0.00 4.04
8963 9792 5.527214 TGTACATTTCTGAAGTGAACTGTGG 59.473 40.000 18.21 0.00 39.21 4.17
9204 10071 3.381272 CGGCCATGATACATTTGAAGGTT 59.619 43.478 2.24 0.00 0.00 3.50
9234 10101 3.004524 GGAGGATAATTCTACTCGCGTGT 59.995 47.826 18.61 18.61 0.00 4.49
9334 10201 0.250901 TTTCTGCCAGGTTCTCCAGC 60.251 55.000 0.00 0.00 36.30 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.