Multiple sequence alignment - TraesCS4A01G086500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G086500 chr4A 100.000 5137 0 0 1 5137 90602283 90597147 0.000000e+00 9487.0
1 TraesCS4A01G086500 chr4A 100.000 2471 0 0 5439 7909 90596845 90594375 0.000000e+00 4564.0
2 TraesCS4A01G086500 chr4A 95.563 293 11 2 1 292 134112124 134112415 1.200000e-127 468.0
3 TraesCS4A01G086500 chr4A 78.460 766 123 26 5568 6314 67294719 67293977 5.590000e-126 462.0
4 TraesCS4A01G086500 chr4A 77.393 721 124 30 5570 6276 680568697 680568002 7.440000e-105 392.0
5 TraesCS4A01G086500 chr4A 96.040 101 2 2 7514 7613 38740531 38740432 6.350000e-36 163.0
6 TraesCS4A01G086500 chr4A 85.915 142 17 2 4992 5130 59275258 59275117 1.780000e-31 148.0
7 TraesCS4A01G086500 chr4A 93.750 96 5 1 3667 3761 652866348 652866443 8.270000e-30 143.0
8 TraesCS4A01G086500 chr4A 85.870 92 10 3 4719 4810 739520090 739520178 2.350000e-15 95.3
9 TraesCS4A01G086500 chr4D 95.252 3412 100 22 543 3929 373847306 373850680 0.000000e+00 5347.0
10 TraesCS4A01G086500 chr4D 92.450 2106 113 18 5439 7516 373851986 373854073 0.000000e+00 2966.0
11 TraesCS4A01G086500 chr4D 90.150 1198 83 14 3948 5137 373850668 373851838 0.000000e+00 1526.0
12 TraesCS4A01G086500 chr4D 95.410 305 11 3 7602 7906 373854072 373854373 4.290000e-132 483.0
13 TraesCS4A01G086500 chr4D 98.837 86 1 0 7515 7600 442748458 442748543 3.820000e-33 154.0
14 TraesCS4A01G086500 chr4B 94.562 3016 108 21 543 3537 459938383 459941363 0.000000e+00 4610.0
15 TraesCS4A01G086500 chr4B 93.546 1224 56 13 6309 7516 459942297 459943513 0.000000e+00 1801.0
16 TraesCS4A01G086500 chr4B 93.394 439 27 1 3950 4386 459941864 459942302 0.000000e+00 649.0
17 TraesCS4A01G086500 chr4B 90.819 403 23 9 3539 3929 459941474 459941874 1.950000e-145 527.0
18 TraesCS4A01G086500 chr4B 94.426 305 10 2 7602 7906 459943512 459943809 5.590000e-126 462.0
19 TraesCS4A01G086500 chr4B 94.898 98 3 2 7515 7610 575913553 575913650 1.370000e-32 152.0
20 TraesCS4A01G086500 chr4B 96.629 89 3 0 7515 7603 44252097 44252009 1.780000e-31 148.0
21 TraesCS4A01G086500 chr4B 96.629 89 3 0 7515 7603 143941350 143941262 1.780000e-31 148.0
22 TraesCS4A01G086500 chr4B 93.939 99 4 2 7506 7603 508232073 508232170 1.780000e-31 148.0
23 TraesCS4A01G086500 chr4B 96.629 89 3 0 7515 7603 511105755 511105667 1.780000e-31 148.0
24 TraesCS4A01G086500 chr4B 75.779 289 44 19 5814 6086 14390219 14390497 1.080000e-23 122.0
25 TraesCS4A01G086500 chr4B 72.727 297 70 10 5952 6243 20332713 20333003 1.090000e-13 89.8
26 TraesCS4A01G086500 chr4B 88.710 62 7 0 4384 4445 662772753 662772814 8.510000e-10 76.8
27 TraesCS4A01G086500 chr4B 85.135 74 10 1 4379 4452 146328937 146328865 3.060000e-09 75.0
28 TraesCS4A01G086500 chr2B 89.686 1018 59 15 6343 7348 577500981 577499998 0.000000e+00 1256.0
29 TraesCS4A01G086500 chr2B 89.524 420 35 4 3970 4386 577501620 577501207 2.530000e-144 523.0
30 TraesCS4A01G086500 chr2B 92.748 262 15 3 3670 3929 577501880 577501621 7.490000e-100 375.0
31 TraesCS4A01G086500 chr2B 80.139 433 65 18 4386 4808 47526498 47526919 3.590000e-78 303.0
32 TraesCS4A01G086500 chr2B 76.051 547 97 25 4612 5137 517918182 517917649 3.660000e-63 254.0
33 TraesCS4A01G086500 chr2B 94.118 102 5 1 7512 7612 129661944 129662045 3.820000e-33 154.0
34 TraesCS4A01G086500 chr2B 84.615 117 15 3 5023 5136 207718892 207719008 6.490000e-21 113.0
35 TraesCS4A01G086500 chr2B 84.416 77 11 1 4380 4455 796747577 796747653 3.060000e-09 75.0
36 TraesCS4A01G086500 chr7B 89.598 1019 58 17 6343 7348 721582221 721581238 0.000000e+00 1251.0
37 TraesCS4A01G086500 chr7B 90.238 420 32 4 3970 4386 721582861 721582448 2.510000e-149 540.0
38 TraesCS4A01G086500 chr7B 93.130 262 14 3 3670 3929 721583121 721582862 1.610000e-101 381.0
39 TraesCS4A01G086500 chr7B 97.895 95 1 1 7514 7607 665543056 665543150 6.350000e-36 163.0
40 TraesCS4A01G086500 chr7B 97.778 90 2 0 7515 7604 658355211 658355300 1.060000e-33 156.0
41 TraesCS4A01G086500 chr7B 95.876 97 3 1 7512 7607 745001706 745001610 1.060000e-33 156.0
42 TraesCS4A01G086500 chr7B 73.618 398 76 19 5821 6203 395709909 395710292 8.330000e-25 126.0
43 TraesCS4A01G086500 chr7B 78.894 199 27 11 5815 6004 642885431 642885623 3.880000e-23 121.0
44 TraesCS4A01G086500 chr7B 89.216 102 4 2 6343 6442 721582432 721582336 3.880000e-23 121.0
45 TraesCS4A01G086500 chr7B 86.567 67 9 0 4386 4452 367755898 367755832 3.060000e-09 75.0
46 TraesCS4A01G086500 chr7D 79.617 888 150 18 5444 6312 132160232 132161107 6.790000e-170 608.0
47 TraesCS4A01G086500 chr7D 93.013 229 12 3 275 501 523542046 523542272 1.650000e-86 331.0
48 TraesCS4A01G086500 chr7D 92.105 228 16 2 275 501 156110922 156110696 3.560000e-83 320.0
49 TraesCS4A01G086500 chr7D 72.310 762 166 28 5444 6168 143978661 143977908 6.260000e-46 196.0
50 TraesCS4A01G086500 chr7D 94.949 99 5 0 7512 7610 163058923 163058825 1.060000e-33 156.0
51 TraesCS4A01G086500 chr7D 84.722 144 13 3 5003 5137 132159966 132160109 1.380000e-27 135.0
52 TraesCS4A01G086500 chr7D 82.524 103 15 3 5036 5135 33994097 33994199 3.930000e-13 87.9
53 TraesCS4A01G086500 chr7A 97.849 279 6 0 1 279 414944300 414944578 4.290000e-132 483.0
54 TraesCS4A01G086500 chr7A 75.265 756 120 49 4406 5131 148663775 148663057 1.670000e-76 298.0
55 TraesCS4A01G086500 chr7A 80.738 244 41 4 4897 5134 227391766 227392009 1.360000e-42 185.0
56 TraesCS4A01G086500 chr7A 94.949 99 5 0 7505 7603 223679805 223679707 1.060000e-33 156.0
57 TraesCS4A01G086500 chr3A 97.849 279 6 0 1 279 638609600 638609878 4.290000e-132 483.0
58 TraesCS4A01G086500 chr3A 95.593 295 12 1 1 295 244505288 244505581 9.290000e-129 472.0
59 TraesCS4A01G086500 chr2A 97.518 282 7 0 1 282 350188326 350188607 4.290000e-132 483.0
60 TraesCS4A01G086500 chr2A 86.429 280 35 3 5472 5751 722124873 722124597 3.590000e-78 303.0
61 TraesCS4A01G086500 chr2A 76.692 399 60 21 4729 5123 685412866 685412497 2.910000e-44 191.0
62 TraesCS4A01G086500 chr5A 97.842 278 6 0 1 278 402253710 402253433 1.540000e-131 481.0
63 TraesCS4A01G086500 chr5A 76.947 321 57 15 4509 4819 14371961 14372274 4.910000e-37 167.0
64 TraesCS4A01G086500 chr5A 91.071 112 8 2 7515 7624 225248507 225248396 4.940000e-32 150.0
65 TraesCS4A01G086500 chr6A 97.491 279 7 0 1 279 488013802 488013524 2.000000e-130 477.0
66 TraesCS4A01G086500 chr6A 97.482 278 7 0 1 278 599138006 599138283 7.180000e-130 475.0
67 TraesCS4A01G086500 chr6A 95.745 94 4 0 7512 7605 592530733 592530826 1.370000e-32 152.0
68 TraesCS4A01G086500 chr6A 73.333 405 80 17 5918 6313 415104504 415104119 3.000000e-24 124.0
69 TraesCS4A01G086500 chr6A 84.375 64 10 0 4386 4449 542386809 542386872 6.630000e-06 63.9
70 TraesCS4A01G086500 chr1A 97.491 279 7 0 1 279 257995582 257995860 2.000000e-130 477.0
71 TraesCS4A01G086500 chr1A 96.667 90 3 0 7514 7603 118503688 118503599 4.940000e-32 150.0
72 TraesCS4A01G086500 chr1A 79.167 192 35 4 5478 5668 430176875 430176688 2.320000e-25 128.0
73 TraesCS4A01G086500 chr1A 88.000 100 9 3 5914 6012 379705886 379705789 1.800000e-21 115.0
74 TraesCS4A01G086500 chr1A 84.848 66 10 0 4384 4449 589184875 589184940 5.120000e-07 67.6
75 TraesCS4A01G086500 chr1A 94.872 39 2 0 4411 4449 9334939 9334977 2.380000e-05 62.1
76 TraesCS4A01G086500 chr6B 92.748 262 15 3 3670 3929 32205340 32205081 7.490000e-100 375.0
77 TraesCS4A01G086500 chr6B 79.361 407 69 12 6535 6933 271825160 271825559 1.010000e-68 272.0
78 TraesCS4A01G086500 chr6B 89.349 169 16 1 3970 4136 32205080 32204912 2.240000e-50 211.0
79 TraesCS4A01G086500 chr6B 87.500 64 8 0 4386 4449 607010583 607010646 3.060000e-09 75.0
80 TraesCS4A01G086500 chr2D 77.958 617 108 18 5651 6253 563971065 563970463 2.100000e-95 361.0
81 TraesCS4A01G086500 chr2D 84.762 315 44 4 5467 5780 587278215 587277904 5.960000e-81 313.0
82 TraesCS4A01G086500 chr2D 94.792 96 5 0 7515 7610 13895071 13895166 4.940000e-32 150.0
83 TraesCS4A01G086500 chr2D 93.137 102 3 4 7514 7612 612499202 612499302 6.400000e-31 147.0
84 TraesCS4A01G086500 chr2D 88.333 60 7 0 4386 4445 557796502 557796561 1.100000e-08 73.1
85 TraesCS4A01G086500 chr2D 86.667 60 8 0 4386 4445 637971069 637971128 5.120000e-07 67.6
86 TraesCS4A01G086500 chr2D 87.500 56 7 0 4384 4439 368937021 368937076 1.840000e-06 65.8
87 TraesCS4A01G086500 chr3D 94.298 228 10 2 275 500 278980422 278980648 5.870000e-91 346.0
88 TraesCS4A01G086500 chr3D 92.105 228 16 2 275 501 216460724 216460950 3.560000e-83 320.0
89 TraesCS4A01G086500 chr3D 97.778 90 2 0 7512 7601 56336876 56336965 1.060000e-33 156.0
90 TraesCS4A01G086500 chr3D 89.091 110 10 2 7511 7618 418436721 418436612 1.380000e-27 135.0
91 TraesCS4A01G086500 chr3D 94.737 38 1 1 4411 4448 18690161 18690125 3.080000e-04 58.4
92 TraesCS4A01G086500 chr5D 93.013 229 13 3 275 501 137052076 137052303 1.650000e-86 331.0
93 TraesCS4A01G086500 chr5D 93.013 229 13 3 275 501 217061015 217061242 1.650000e-86 331.0
94 TraesCS4A01G086500 chr5D 92.982 228 14 2 275 501 331514494 331514268 1.650000e-86 331.0
95 TraesCS4A01G086500 chr5D 92.140 229 15 2 275 501 35278753 35278526 3.560000e-83 320.0
96 TraesCS4A01G086500 chr5D 73.086 888 172 38 5439 6310 395771597 395772433 3.660000e-63 254.0
97 TraesCS4A01G086500 chr5D 98.889 90 1 0 7512 7601 312853977 312854066 2.280000e-35 161.0
98 TraesCS4A01G086500 chr5D 78.838 241 47 2 6001 6237 404769349 404769589 8.210000e-35 159.0
99 TraesCS4A01G086500 chr5D 96.629 89 3 0 7515 7603 363233785 363233873 1.780000e-31 148.0
100 TraesCS4A01G086500 chr5D 96.591 88 3 0 7513 7600 86401038 86400951 6.400000e-31 147.0
101 TraesCS4A01G086500 chr5D 96.591 88 3 0 7514 7601 312854066 312853979 6.400000e-31 147.0
102 TraesCS4A01G086500 chr5D 94.681 94 3 2 7515 7607 74461657 74461749 2.300000e-30 145.0
103 TraesCS4A01G086500 chr5D 90.909 110 6 3 7515 7620 514202028 514202137 2.300000e-30 145.0
104 TraesCS4A01G086500 chr5D 86.111 72 6 3 4386 4455 557425176 557425107 3.060000e-09 75.0
105 TraesCS4A01G086500 chr5B 74.237 885 182 38 5456 6315 41382310 41383173 5.920000e-86 329.0
106 TraesCS4A01G086500 chr5B 89.552 67 4 3 998 1062 613275484 613275419 1.830000e-11 82.4
107 TraesCS4A01G086500 chr5B 88.710 62 7 0 4384 4445 65090134 65090073 8.510000e-10 76.8
108 TraesCS4A01G086500 chr5B 85.507 69 10 0 4384 4452 638597184 638597116 1.100000e-08 73.1
109 TraesCS4A01G086500 chr5B 100.000 28 0 0 6287 6314 613636337 613636310 1.400000e-02 52.8
110 TraesCS4A01G086500 chr1D 92.576 229 14 3 275 501 232155992 232156219 7.650000e-85 326.0
111 TraesCS4A01G086500 chr1D 95.652 92 4 0 7512 7603 12153644 12153553 1.780000e-31 148.0
112 TraesCS4A01G086500 chr1D 95.652 92 4 0 7512 7603 13295734 13295825 1.780000e-31 148.0
113 TraesCS4A01G086500 chr1D 84.667 150 15 5 4993 5137 575993 575847 8.270000e-30 143.0
114 TraesCS4A01G086500 chr1D 95.455 88 4 0 7514 7601 107173591 107173678 2.980000e-29 141.0
115 TraesCS4A01G086500 chr1D 74.336 339 75 9 5985 6314 373993739 373993404 4.980000e-27 134.0
116 TraesCS4A01G086500 chr1B 74.282 836 178 31 5452 6267 671250734 671251552 1.280000e-82 318.0
117 TraesCS4A01G086500 chr1B 78.788 264 42 10 5785 6035 101589343 101589081 1.770000e-36 165.0
118 TraesCS4A01G086500 chr1B 96.875 96 3 0 7512 7607 428074670 428074575 2.280000e-35 161.0
119 TraesCS4A01G086500 chr1B 91.818 110 6 3 7506 7613 563409791 563409899 4.940000e-32 150.0
120 TraesCS4A01G086500 chr1B 92.233 103 8 0 7499 7601 345500226 345500328 6.400000e-31 147.0
121 TraesCS4A01G086500 chr1B 94.624 93 4 1 3670 3761 503323538 503323446 8.270000e-30 143.0
122 TraesCS4A01G086500 chr1B 82.667 150 18 5 4993 5137 4344208 4344062 8.330000e-25 126.0
123 TraesCS4A01G086500 chr1B 77.838 185 34 7 6136 6314 669038746 669038563 3.020000e-19 108.0
124 TraesCS4A01G086500 chr6D 74.266 715 141 29 5496 6189 352759927 352759235 2.190000e-65 261.0
125 TraesCS4A01G086500 chr6D 74.923 650 111 37 4507 5137 422607291 422607907 4.740000e-62 250.0
126 TraesCS4A01G086500 chr6D 98.851 87 1 0 7514 7600 383526509 383526423 1.060000e-33 156.0
127 TraesCS4A01G086500 chr6D 97.727 88 2 0 7513 7600 136466305 136466392 1.370000e-32 152.0
128 TraesCS4A01G086500 chr6D 96.552 87 3 0 7515 7601 383526423 383526509 2.300000e-30 145.0
129 TraesCS4A01G086500 chr6D 96.591 88 2 1 7515 7601 402030560 402030647 2.300000e-30 145.0
130 TraesCS4A01G086500 chrUn 82.297 209 22 11 5815 6014 99494348 99494550 4.910000e-37 167.0
131 TraesCS4A01G086500 chrUn 96.591 88 3 0 7515 7602 144054895 144054808 6.400000e-31 147.0
132 TraesCS4A01G086500 chrUn 96.552 87 3 0 7514 7600 15864345 15864259 2.300000e-30 145.0
133 TraesCS4A01G086500 chrUn 96.552 87 3 0 7515 7601 155926800 155926886 2.300000e-30 145.0
134 TraesCS4A01G086500 chrUn 96.512 86 3 0 7515 7600 94636258 94636343 8.270000e-30 143.0
135 TraesCS4A01G086500 chrUn 95.402 87 4 0 7515 7601 75235730 75235816 1.070000e-28 139.0
136 TraesCS4A01G086500 chrUn 95.402 87 4 0 7514 7600 84102613 84102699 1.070000e-28 139.0
137 TraesCS4A01G086500 chrUn 89.381 113 9 3 7511 7620 122302097 122302209 1.070000e-28 139.0
138 TraesCS4A01G086500 chrUn 95.402 87 4 0 7514 7600 314912892 314912806 1.070000e-28 139.0
139 TraesCS4A01G086500 chrUn 95.402 87 4 0 7514 7600 350108578 350108664 1.070000e-28 139.0
140 TraesCS4A01G086500 chrUn 95.349 86 4 0 7515 7600 49991392 49991477 3.850000e-28 137.0
141 TraesCS4A01G086500 chrUn 94.382 89 5 0 7512 7600 279936303 279936215 3.850000e-28 137.0
142 TraesCS4A01G086500 chr3B 94.949 99 5 0 7507 7605 15762499 15762597 1.060000e-33 156.0
143 TraesCS4A01G086500 chr3B 85.915 71 8 2 4386 4455 274516292 274516223 3.060000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G086500 chr4A 90594375 90602283 7908 True 7025.50 9487 100.000000 1 7909 2 chr4A.!!$R5 7908
1 TraesCS4A01G086500 chr4A 67293977 67294719 742 True 462.00 462 78.460000 5568 6314 1 chr4A.!!$R3 746
2 TraesCS4A01G086500 chr4A 680568002 680568697 695 True 392.00 392 77.393000 5570 6276 1 chr4A.!!$R4 706
3 TraesCS4A01G086500 chr4D 373847306 373854373 7067 False 2580.50 5347 93.315500 543 7906 4 chr4D.!!$F2 7363
4 TraesCS4A01G086500 chr4B 459938383 459943809 5426 False 1609.80 4610 93.349400 543 7906 5 chr4B.!!$F6 7363
5 TraesCS4A01G086500 chr2B 577499998 577501880 1882 True 718.00 1256 90.652667 3670 7348 3 chr2B.!!$R2 3678
6 TraesCS4A01G086500 chr2B 517917649 517918182 533 True 254.00 254 76.051000 4612 5137 1 chr2B.!!$R1 525
7 TraesCS4A01G086500 chr7B 721581238 721583121 1883 True 573.25 1251 90.545500 3670 7348 4 chr7B.!!$R3 3678
8 TraesCS4A01G086500 chr7D 132159966 132161107 1141 False 371.50 608 82.169500 5003 6312 2 chr7D.!!$F3 1309
9 TraesCS4A01G086500 chr7A 148663057 148663775 718 True 298.00 298 75.265000 4406 5131 1 chr7A.!!$R1 725
10 TraesCS4A01G086500 chr2D 563970463 563971065 602 True 361.00 361 77.958000 5651 6253 1 chr2D.!!$R1 602
11 TraesCS4A01G086500 chr5D 395771597 395772433 836 False 254.00 254 73.086000 5439 6310 1 chr5D.!!$F6 871
12 TraesCS4A01G086500 chr5B 41382310 41383173 863 False 329.00 329 74.237000 5456 6315 1 chr5B.!!$F1 859
13 TraesCS4A01G086500 chr1B 671250734 671251552 818 False 318.00 318 74.282000 5452 6267 1 chr1B.!!$F3 815
14 TraesCS4A01G086500 chr6D 352759235 352759927 692 True 261.00 261 74.266000 5496 6189 1 chr6D.!!$R1 693
15 TraesCS4A01G086500 chr6D 422607291 422607907 616 False 250.00 250 74.923000 4507 5137 1 chr6D.!!$F4 630

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
230 231 0.032515 TAGTCCAGGAATCCGGCTGA 60.033 55.000 8.24 0.0 0.00 4.26 F
244 245 0.033642 GGCTGAAGGTATAGTCCGGC 59.966 60.000 0.00 0.0 0.00 6.13 F
245 246 0.033642 GCTGAAGGTATAGTCCGGCC 59.966 60.000 0.00 0.0 0.00 6.13 F
442 443 0.034756 TGTATGTCGGCTTGTGTGCT 59.965 50.000 0.00 0.0 0.00 4.40 F
483 484 0.317160 TGGCGTGATCGAACTCAAGT 59.683 50.000 4.31 0.0 39.71 3.16 F
1481 1497 0.323302 TGCTTCGACATAGGCCACAA 59.677 50.000 5.01 0.0 0.00 3.33 F
2256 2272 0.324614 TCATTGATGCCGGTGTGTCT 59.675 50.000 1.90 0.0 0.00 3.41 F
2320 2336 0.678048 GAGGCGGCATTTCTTGGAGT 60.678 55.000 13.08 0.0 0.00 3.85 F
3491 3527 1.079543 CCTCAGAACCTCACTGCCG 60.080 63.158 0.00 0.0 35.61 5.69 F
3553 3699 1.202698 CCCATCCTCGATCTTTGTCCC 60.203 57.143 0.00 0.0 0.00 4.46 F
4726 5135 0.160182 GTCGTTTAGTTGCCGTCGTG 59.840 55.000 0.00 0.0 0.00 4.35 F
4900 5331 0.178068 GGCATGGACATGTACTCCGT 59.822 55.000 10.05 0.0 40.80 4.69 F
6078 6577 1.001887 TAAATGTGGGCGGTGGGAC 60.002 57.895 0.00 0.0 0.00 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1683 1699 0.678048 GGAGGAGCAAGCCACGAAAT 60.678 55.000 0.00 0.0 0.00 2.17 R
1716 1732 1.888512 CCAACAACCATGAGTTCCCAG 59.111 52.381 0.00 0.0 36.18 4.45 R
2035 2051 3.386726 CCATTGGATCCATTTGCTGATGT 59.613 43.478 17.06 0.0 0.00 3.06 R
2320 2336 1.868498 CGCAAGGAAGTTGGTCGTTAA 59.132 47.619 0.00 0.0 36.56 2.01 R
2394 2410 4.331968 GTGGAAGTAATGGTGGATCAACA 58.668 43.478 1.86 0.0 34.75 3.33 R
3079 3109 0.250727 TTTCGTGCTGGCCTAAAGCT 60.251 50.000 14.14 0.0 43.05 3.74 R
3553 3699 0.105349 TGGTAGGATAAGGGTCCGGG 60.105 60.000 0.00 0.0 43.27 5.73 R
3554 3700 1.797320 TTGGTAGGATAAGGGTCCGG 58.203 55.000 0.00 0.0 43.27 5.14 R
4337 4504 0.458669 CCAGTGCCGTTACTACCGAT 59.541 55.000 0.00 0.0 0.00 4.18 R
5492 5940 0.179056 CACTCTGGGACACGTGGTTT 60.179 55.000 21.57 0.0 32.96 3.27 R
5563 6011 1.154188 GAGATCTATCGCCGTCGCC 60.154 63.158 0.00 0.0 35.26 5.54 R
6770 7291 1.072806 ACACTGAATGCTGCTTGGAGA 59.927 47.619 0.00 0.0 0.00 3.71 R
7522 8058 1.681264 GGGCCATCTATTTTGGAACGG 59.319 52.381 4.39 0.0 36.26 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.360370 CCTAAAAGCTAGCCTATGGTATGA 57.640 41.667 12.13 0.00 0.00 2.15
24 25 6.951971 CCTAAAAGCTAGCCTATGGTATGAT 58.048 40.000 12.13 0.00 0.00 2.45
25 26 7.398024 CCTAAAAGCTAGCCTATGGTATGATT 58.602 38.462 12.13 0.00 0.00 2.57
26 27 7.335422 CCTAAAAGCTAGCCTATGGTATGATTG 59.665 40.741 12.13 0.00 0.00 2.67
27 28 5.832539 AAGCTAGCCTATGGTATGATTGT 57.167 39.130 12.13 0.00 0.00 2.71
28 29 5.832539 AGCTAGCCTATGGTATGATTGTT 57.167 39.130 12.13 0.00 0.00 2.83
29 30 5.555017 AGCTAGCCTATGGTATGATTGTTG 58.445 41.667 12.13 0.00 0.00 3.33
30 31 5.072329 AGCTAGCCTATGGTATGATTGTTGT 59.928 40.000 12.13 0.00 0.00 3.32
31 32 5.765182 GCTAGCCTATGGTATGATTGTTGTT 59.235 40.000 2.29 0.00 0.00 2.83
32 33 6.073003 GCTAGCCTATGGTATGATTGTTGTTC 60.073 42.308 2.29 0.00 0.00 3.18
33 34 6.006275 AGCCTATGGTATGATTGTTGTTCT 57.994 37.500 0.00 0.00 0.00 3.01
34 35 7.136822 AGCCTATGGTATGATTGTTGTTCTA 57.863 36.000 0.00 0.00 0.00 2.10
35 36 7.749666 AGCCTATGGTATGATTGTTGTTCTAT 58.250 34.615 0.00 0.00 0.00 1.98
36 37 8.880244 AGCCTATGGTATGATTGTTGTTCTATA 58.120 33.333 0.00 0.00 0.00 1.31
37 38 9.672673 GCCTATGGTATGATTGTTGTTCTATAT 57.327 33.333 0.00 0.00 0.00 0.86
42 43 9.679661 TGGTATGATTGTTGTTCTATATGTTGT 57.320 29.630 0.00 0.00 0.00 3.32
47 48 9.378551 TGATTGTTGTTCTATATGTTGTCCTAC 57.621 33.333 0.00 0.00 0.00 3.18
48 49 7.821595 TTGTTGTTCTATATGTTGTCCTACG 57.178 36.000 0.00 0.00 0.00 3.51
49 50 6.334989 TGTTGTTCTATATGTTGTCCTACGG 58.665 40.000 0.00 0.00 0.00 4.02
50 51 6.153170 TGTTGTTCTATATGTTGTCCTACGGA 59.847 38.462 0.00 0.00 0.00 4.69
62 63 2.460669 TCCTACGGACTAAAACCCTCC 58.539 52.381 0.00 0.00 0.00 4.30
64 65 4.926207 CGGACTAAAACCCTCCGG 57.074 61.111 0.00 0.00 42.76 5.14
78 79 3.899980 ACCCTCCGGTTTATATAGACACC 59.100 47.826 0.00 2.59 40.58 4.16
84 85 5.044428 CGGTTTATATAGACACCGGAGAG 57.956 47.826 15.65 0.00 46.92 3.20
85 86 4.082895 CGGTTTATATAGACACCGGAGAGG 60.083 50.000 15.65 0.00 46.92 3.69
86 87 4.220163 GGTTTATATAGACACCGGAGAGGG 59.780 50.000 9.46 0.00 46.96 4.30
87 88 4.736611 TTATATAGACACCGGAGAGGGT 57.263 45.455 9.46 0.00 46.96 4.34
88 89 3.614568 ATATAGACACCGGAGAGGGTT 57.385 47.619 9.46 0.00 46.96 4.11
89 90 4.736611 ATATAGACACCGGAGAGGGTTA 57.263 45.455 9.46 0.00 46.96 2.85
90 91 2.431954 TAGACACCGGAGAGGGTTAG 57.568 55.000 9.46 0.00 46.96 2.34
91 92 0.324460 AGACACCGGAGAGGGTTAGG 60.324 60.000 9.46 0.00 46.96 2.69
92 93 1.305887 ACACCGGAGAGGGTTAGGG 60.306 63.158 9.46 0.00 46.96 3.53
93 94 1.305887 CACCGGAGAGGGTTAGGGT 60.306 63.158 9.46 0.00 46.96 4.34
94 95 0.908180 CACCGGAGAGGGTTAGGGTT 60.908 60.000 9.46 0.00 46.96 4.11
95 96 0.712380 ACCGGAGAGGGTTAGGGTTA 59.288 55.000 9.46 0.00 46.96 2.85
96 97 1.117994 CCGGAGAGGGTTAGGGTTAC 58.882 60.000 0.00 0.00 35.97 2.50
97 98 1.620524 CCGGAGAGGGTTAGGGTTACA 60.621 57.143 0.00 0.00 35.97 2.41
98 99 1.479730 CGGAGAGGGTTAGGGTTACAC 59.520 57.143 0.00 0.00 0.00 2.90
99 100 2.543635 GGAGAGGGTTAGGGTTACACA 58.456 52.381 0.00 0.00 0.00 3.72
100 101 2.908351 GGAGAGGGTTAGGGTTACACAA 59.092 50.000 0.00 0.00 0.00 3.33
101 102 3.328637 GGAGAGGGTTAGGGTTACACAAA 59.671 47.826 0.00 0.00 0.00 2.83
102 103 4.565028 GGAGAGGGTTAGGGTTACACAAAG 60.565 50.000 0.00 0.00 0.00 2.77
103 104 3.978672 AGAGGGTTAGGGTTACACAAAGT 59.021 43.478 0.00 0.00 0.00 2.66
104 105 4.041321 AGAGGGTTAGGGTTACACAAAGTC 59.959 45.833 0.00 0.00 0.00 3.01
105 106 3.069289 GGGTTAGGGTTACACAAAGTCG 58.931 50.000 0.00 0.00 0.00 4.18
106 107 3.069289 GGTTAGGGTTACACAAAGTCGG 58.931 50.000 0.00 0.00 0.00 4.79
107 108 3.494924 GGTTAGGGTTACACAAAGTCGGT 60.495 47.826 0.00 0.00 0.00 4.69
108 109 4.129380 GTTAGGGTTACACAAAGTCGGTT 58.871 43.478 0.00 0.00 0.00 4.44
109 110 5.296748 GTTAGGGTTACACAAAGTCGGTTA 58.703 41.667 0.00 0.00 0.00 2.85
110 111 3.732212 AGGGTTACACAAAGTCGGTTAC 58.268 45.455 0.00 0.00 0.00 2.50
111 112 3.134442 AGGGTTACACAAAGTCGGTTACA 59.866 43.478 0.00 0.00 0.00 2.41
112 113 3.876320 GGGTTACACAAAGTCGGTTACAA 59.124 43.478 0.00 0.00 0.00 2.41
113 114 4.516321 GGGTTACACAAAGTCGGTTACAAT 59.484 41.667 0.00 0.00 0.00 2.71
114 115 5.445845 GGTTACACAAAGTCGGTTACAATG 58.554 41.667 0.00 0.00 0.00 2.82
115 116 5.445845 GTTACACAAAGTCGGTTACAATGG 58.554 41.667 0.00 0.00 0.00 3.16
116 117 3.547746 ACACAAAGTCGGTTACAATGGT 58.452 40.909 0.00 0.00 0.00 3.55
117 118 4.706035 ACACAAAGTCGGTTACAATGGTA 58.294 39.130 0.00 0.00 0.00 3.25
118 119 4.753107 ACACAAAGTCGGTTACAATGGTAG 59.247 41.667 0.00 0.00 0.00 3.18
119 120 4.153475 CACAAAGTCGGTTACAATGGTAGG 59.847 45.833 0.00 0.00 0.00 3.18
120 121 4.040706 ACAAAGTCGGTTACAATGGTAGGA 59.959 41.667 0.00 0.00 0.00 2.94
121 122 4.467198 AAGTCGGTTACAATGGTAGGAG 57.533 45.455 0.00 0.00 0.00 3.69
122 123 3.705051 AGTCGGTTACAATGGTAGGAGA 58.295 45.455 0.00 0.00 0.00 3.71
123 124 4.287552 AGTCGGTTACAATGGTAGGAGAT 58.712 43.478 0.00 0.00 0.00 2.75
124 125 4.715297 AGTCGGTTACAATGGTAGGAGATT 59.285 41.667 0.00 0.00 0.00 2.40
125 126 5.189145 AGTCGGTTACAATGGTAGGAGATTT 59.811 40.000 0.00 0.00 0.00 2.17
126 127 6.381994 AGTCGGTTACAATGGTAGGAGATTTA 59.618 38.462 0.00 0.00 0.00 1.40
127 128 6.478016 GTCGGTTACAATGGTAGGAGATTTAC 59.522 42.308 0.00 0.00 0.00 2.01
128 129 6.154877 TCGGTTACAATGGTAGGAGATTTACA 59.845 38.462 0.00 0.00 0.00 2.41
129 130 6.990349 CGGTTACAATGGTAGGAGATTTACAT 59.010 38.462 0.00 0.00 0.00 2.29
130 131 8.145767 CGGTTACAATGGTAGGAGATTTACATA 58.854 37.037 0.00 0.00 0.00 2.29
134 135 7.386851 ACAATGGTAGGAGATTTACATATCCG 58.613 38.462 0.00 0.00 44.55 4.18
135 136 7.016268 ACAATGGTAGGAGATTTACATATCCGT 59.984 37.037 0.00 0.00 44.55 4.69
136 137 8.528643 CAATGGTAGGAGATTTACATATCCGTA 58.471 37.037 0.00 0.00 44.55 4.02
137 138 8.840200 ATGGTAGGAGATTTACATATCCGTAT 57.160 34.615 0.00 0.00 44.55 3.06
138 139 8.289939 TGGTAGGAGATTTACATATCCGTATC 57.710 38.462 0.00 0.00 44.55 2.24
139 140 7.066645 TGGTAGGAGATTTACATATCCGTATCG 59.933 40.741 0.00 0.00 44.55 2.92
140 141 5.892568 AGGAGATTTACATATCCGTATCGC 58.107 41.667 0.00 0.00 44.55 4.58
141 142 5.041940 GGAGATTTACATATCCGTATCGCC 58.958 45.833 0.00 0.00 30.98 5.54
142 143 5.393787 GGAGATTTACATATCCGTATCGCCA 60.394 44.000 0.00 0.00 30.98 5.69
143 144 6.032956 AGATTTACATATCCGTATCGCCAA 57.967 37.500 0.00 0.00 0.00 4.52
144 145 6.100004 AGATTTACATATCCGTATCGCCAAG 58.900 40.000 0.00 0.00 0.00 3.61
145 146 2.080286 ACATATCCGTATCGCCAAGC 57.920 50.000 0.00 0.00 0.00 4.01
146 147 1.618837 ACATATCCGTATCGCCAAGCT 59.381 47.619 0.00 0.00 0.00 3.74
147 148 2.037251 ACATATCCGTATCGCCAAGCTT 59.963 45.455 0.00 0.00 0.00 3.74
148 149 2.148916 TATCCGTATCGCCAAGCTTG 57.851 50.000 19.93 19.93 0.00 4.01
149 150 1.160329 ATCCGTATCGCCAAGCTTGC 61.160 55.000 21.43 14.85 0.00 4.01
150 151 2.709475 CGTATCGCCAAGCTTGCC 59.291 61.111 21.43 9.45 0.00 4.52
151 152 1.815421 CGTATCGCCAAGCTTGCCT 60.815 57.895 21.43 7.17 0.00 4.75
152 153 1.369091 CGTATCGCCAAGCTTGCCTT 61.369 55.000 21.43 7.68 0.00 4.35
153 154 0.378610 GTATCGCCAAGCTTGCCTTC 59.621 55.000 21.43 8.32 0.00 3.46
154 155 0.748005 TATCGCCAAGCTTGCCTTCC 60.748 55.000 21.43 5.26 0.00 3.46
155 156 2.769652 ATCGCCAAGCTTGCCTTCCA 62.770 55.000 21.43 1.33 0.00 3.53
156 157 2.345760 CGCCAAGCTTGCCTTCCAT 61.346 57.895 21.43 0.00 0.00 3.41
157 158 1.217244 GCCAAGCTTGCCTTCCATG 59.783 57.895 21.43 5.84 0.00 3.66
158 159 1.217244 CCAAGCTTGCCTTCCATGC 59.783 57.895 21.43 0.00 43.02 4.06
159 160 1.217244 CAAGCTTGCCTTCCATGCC 59.783 57.895 14.65 0.00 43.55 4.40
160 161 1.228956 AAGCTTGCCTTCCATGCCA 60.229 52.632 0.00 0.00 43.55 4.92
161 162 0.832983 AAGCTTGCCTTCCATGCCAA 60.833 50.000 0.00 0.00 43.55 4.52
162 163 1.217244 GCTTGCCTTCCATGCCAAG 59.783 57.895 0.00 0.00 38.34 3.61
163 164 1.252904 GCTTGCCTTCCATGCCAAGA 61.253 55.000 3.64 0.00 38.34 3.02
164 165 1.259609 CTTGCCTTCCATGCCAAGAA 58.740 50.000 4.58 0.00 0.00 2.52
165 166 1.619827 CTTGCCTTCCATGCCAAGAAA 59.380 47.619 4.58 0.00 0.00 2.52
166 167 1.714541 TGCCTTCCATGCCAAGAAAA 58.285 45.000 4.58 0.00 0.00 2.29
167 168 1.619827 TGCCTTCCATGCCAAGAAAAG 59.380 47.619 4.58 0.00 0.00 2.27
168 169 1.620323 GCCTTCCATGCCAAGAAAAGT 59.380 47.619 4.58 0.00 0.00 2.66
169 170 2.353109 GCCTTCCATGCCAAGAAAAGTC 60.353 50.000 4.58 0.00 0.00 3.01
170 171 2.232208 CCTTCCATGCCAAGAAAAGTCC 59.768 50.000 4.58 0.00 0.00 3.85
171 172 1.923356 TCCATGCCAAGAAAAGTCCC 58.077 50.000 0.00 0.00 0.00 4.46
172 173 1.428912 TCCATGCCAAGAAAAGTCCCT 59.571 47.619 0.00 0.00 0.00 4.20
173 174 2.158325 TCCATGCCAAGAAAAGTCCCTT 60.158 45.455 0.00 0.00 0.00 3.95
174 175 2.232208 CCATGCCAAGAAAAGTCCCTTC 59.768 50.000 0.00 0.00 0.00 3.46
175 176 1.995376 TGCCAAGAAAAGTCCCTTCC 58.005 50.000 0.00 0.00 0.00 3.46
176 177 0.881796 GCCAAGAAAAGTCCCTTCCG 59.118 55.000 0.00 0.00 0.00 4.30
177 178 1.534729 CCAAGAAAAGTCCCTTCCGG 58.465 55.000 0.00 0.00 0.00 5.14
178 179 1.073284 CCAAGAAAAGTCCCTTCCGGA 59.927 52.381 0.00 0.00 38.83 5.14
211 212 9.877178 ACGAAGTCTTCAATCTTGTATCTTTAT 57.123 29.630 12.99 0.00 29.74 1.40
220 221 9.434275 TCAATCTTGTATCTTTATAGTCCAGGA 57.566 33.333 0.00 0.00 0.00 3.86
224 225 8.871125 TCTTGTATCTTTATAGTCCAGGAATCC 58.129 37.037 0.00 0.00 0.00 3.01
225 226 7.228314 TGTATCTTTATAGTCCAGGAATCCG 57.772 40.000 0.00 0.00 0.00 4.18
226 227 5.746990 ATCTTTATAGTCCAGGAATCCGG 57.253 43.478 0.00 0.00 0.00 5.14
227 228 3.323979 TCTTTATAGTCCAGGAATCCGGC 59.676 47.826 0.00 2.26 0.00 6.13
228 229 2.696526 TATAGTCCAGGAATCCGGCT 57.303 50.000 0.00 8.17 0.00 5.52
229 230 1.051812 ATAGTCCAGGAATCCGGCTG 58.948 55.000 0.00 0.00 0.00 4.85
230 231 0.032515 TAGTCCAGGAATCCGGCTGA 60.033 55.000 8.24 0.00 0.00 4.26
231 232 0.909610 AGTCCAGGAATCCGGCTGAA 60.910 55.000 8.24 0.00 0.00 3.02
232 233 0.462759 GTCCAGGAATCCGGCTGAAG 60.463 60.000 8.24 0.00 0.00 3.02
233 234 1.153086 CCAGGAATCCGGCTGAAGG 60.153 63.158 8.24 0.00 0.00 3.46
234 235 1.604378 CAGGAATCCGGCTGAAGGT 59.396 57.895 0.00 0.00 0.00 3.50
235 236 0.830648 CAGGAATCCGGCTGAAGGTA 59.169 55.000 0.00 0.00 0.00 3.08
236 237 1.417890 CAGGAATCCGGCTGAAGGTAT 59.582 52.381 0.00 0.00 0.00 2.73
237 238 2.632996 CAGGAATCCGGCTGAAGGTATA 59.367 50.000 0.00 0.00 0.00 1.47
238 239 2.900546 AGGAATCCGGCTGAAGGTATAG 59.099 50.000 0.00 0.00 0.00 1.31
239 240 2.633481 GGAATCCGGCTGAAGGTATAGT 59.367 50.000 0.00 0.00 0.00 2.12
240 241 3.306156 GGAATCCGGCTGAAGGTATAGTC 60.306 52.174 0.00 0.00 0.00 2.59
241 242 1.700955 TCCGGCTGAAGGTATAGTCC 58.299 55.000 0.00 0.00 0.00 3.85
242 243 0.314302 CCGGCTGAAGGTATAGTCCG 59.686 60.000 0.00 0.00 35.13 4.79
243 244 0.314302 CGGCTGAAGGTATAGTCCGG 59.686 60.000 0.00 0.00 33.23 5.14
244 245 0.033642 GGCTGAAGGTATAGTCCGGC 59.966 60.000 0.00 0.00 0.00 6.13
245 246 0.033642 GCTGAAGGTATAGTCCGGCC 59.966 60.000 0.00 0.00 0.00 6.13
246 247 1.410004 CTGAAGGTATAGTCCGGCCA 58.590 55.000 2.24 0.00 0.00 5.36
247 248 1.971357 CTGAAGGTATAGTCCGGCCAT 59.029 52.381 2.24 0.00 0.00 4.40
248 249 1.968493 TGAAGGTATAGTCCGGCCATC 59.032 52.381 2.24 0.00 0.00 3.51
249 250 1.275573 GAAGGTATAGTCCGGCCATCC 59.724 57.143 2.24 0.00 0.00 3.51
261 262 2.041301 CCATCCGGACACCCCCTA 60.041 66.667 6.12 0.00 0.00 3.53
262 263 1.691337 CCATCCGGACACCCCCTAA 60.691 63.158 6.12 0.00 0.00 2.69
263 264 1.060163 CCATCCGGACACCCCCTAAT 61.060 60.000 6.12 0.00 0.00 1.73
264 265 0.396811 CATCCGGACACCCCCTAATC 59.603 60.000 6.12 0.00 0.00 1.75
265 266 0.767060 ATCCGGACACCCCCTAATCC 60.767 60.000 6.12 0.00 0.00 3.01
266 267 1.691337 CCGGACACCCCCTAATCCA 60.691 63.158 0.00 0.00 0.00 3.41
267 268 1.696097 CCGGACACCCCCTAATCCAG 61.696 65.000 0.00 0.00 0.00 3.86
268 269 1.696097 CGGACACCCCCTAATCCAGG 61.696 65.000 0.00 0.00 45.07 4.45
279 280 1.691434 CTAATCCAGGACTCCCTCAGC 59.309 57.143 0.00 0.00 42.02 4.26
280 281 1.333636 AATCCAGGACTCCCTCAGCG 61.334 60.000 0.00 0.00 42.02 5.18
281 282 2.230189 ATCCAGGACTCCCTCAGCGA 62.230 60.000 0.00 0.00 42.02 4.93
282 283 2.422231 CCAGGACTCCCTCAGCGAG 61.422 68.421 0.00 0.00 42.02 5.03
283 284 2.757917 AGGACTCCCTCAGCGAGC 60.758 66.667 0.00 0.00 38.86 5.03
284 285 3.071206 GGACTCCCTCAGCGAGCA 61.071 66.667 0.00 0.00 0.00 4.26
285 286 2.430610 GGACTCCCTCAGCGAGCAT 61.431 63.158 0.00 0.00 0.00 3.79
286 287 1.227205 GACTCCCTCAGCGAGCATG 60.227 63.158 0.00 0.00 0.00 4.06
287 288 1.670949 GACTCCCTCAGCGAGCATGA 61.671 60.000 0.00 0.00 0.00 3.07
288 289 1.047596 ACTCCCTCAGCGAGCATGAT 61.048 55.000 0.00 0.00 0.00 2.45
289 290 0.600518 CTCCCTCAGCGAGCATGATG 60.601 60.000 0.00 0.00 0.00 3.07
290 291 1.044790 TCCCTCAGCGAGCATGATGA 61.045 55.000 0.00 0.00 32.57 2.92
291 292 0.879400 CCCTCAGCGAGCATGATGAC 60.879 60.000 0.00 0.00 29.97 3.06
292 293 0.879400 CCTCAGCGAGCATGATGACC 60.879 60.000 0.00 0.00 29.97 4.02
293 294 1.213733 CTCAGCGAGCATGATGACCG 61.214 60.000 0.00 0.00 29.97 4.79
294 295 2.107750 AGCGAGCATGATGACCGG 59.892 61.111 0.00 0.00 0.00 5.28
295 296 2.969238 GCGAGCATGATGACCGGG 60.969 66.667 6.32 0.00 0.00 5.73
296 297 2.280389 CGAGCATGATGACCGGGG 60.280 66.667 6.32 0.00 0.00 5.73
297 298 2.911143 GAGCATGATGACCGGGGT 59.089 61.111 6.32 0.00 0.00 4.95
298 299 1.524621 GAGCATGATGACCGGGGTG 60.525 63.158 6.32 0.00 0.00 4.61
299 300 2.516930 GCATGATGACCGGGGTGG 60.517 66.667 6.32 0.00 46.41 4.61
300 301 3.042733 GCATGATGACCGGGGTGGA 62.043 63.158 6.32 0.00 42.00 4.02
301 302 1.146930 CATGATGACCGGGGTGGAG 59.853 63.158 6.32 0.00 42.00 3.86
302 303 1.002921 ATGATGACCGGGGTGGAGA 59.997 57.895 6.32 0.00 42.00 3.71
303 304 0.400525 ATGATGACCGGGGTGGAGAT 60.401 55.000 6.32 0.00 42.00 2.75
304 305 1.048724 TGATGACCGGGGTGGAGATC 61.049 60.000 6.32 0.00 42.00 2.75
305 306 1.002921 ATGACCGGGGTGGAGATCA 59.997 57.895 6.32 0.00 42.00 2.92
306 307 0.400525 ATGACCGGGGTGGAGATCAT 60.401 55.000 6.32 0.00 42.00 2.45
307 308 1.337384 TGACCGGGGTGGAGATCATG 61.337 60.000 6.32 0.00 42.00 3.07
308 309 1.002921 ACCGGGGTGGAGATCATGA 59.997 57.895 6.32 0.00 42.00 3.07
309 310 0.620410 ACCGGGGTGGAGATCATGAA 60.620 55.000 6.32 0.00 42.00 2.57
310 311 0.107456 CCGGGGTGGAGATCATGAAG 59.893 60.000 0.00 0.00 42.00 3.02
311 312 0.107456 CGGGGTGGAGATCATGAAGG 59.893 60.000 0.00 0.00 0.00 3.46
312 313 1.216990 GGGGTGGAGATCATGAAGGT 58.783 55.000 0.00 0.00 0.00 3.50
313 314 1.133976 GGGGTGGAGATCATGAAGGTG 60.134 57.143 0.00 0.00 0.00 4.00
314 315 1.133976 GGGTGGAGATCATGAAGGTGG 60.134 57.143 0.00 0.00 0.00 4.61
315 316 1.839994 GGTGGAGATCATGAAGGTGGA 59.160 52.381 0.00 0.00 0.00 4.02
316 317 2.441001 GGTGGAGATCATGAAGGTGGAT 59.559 50.000 0.00 0.00 0.00 3.41
317 318 3.495806 GGTGGAGATCATGAAGGTGGATC 60.496 52.174 0.00 0.00 38.13 3.36
322 323 5.908562 AGATCATGAAGGTGGATCTCAAT 57.091 39.130 0.00 0.00 43.06 2.57
324 325 6.767456 AGATCATGAAGGTGGATCTCAATAC 58.233 40.000 0.00 0.00 43.06 1.89
325 326 5.296151 TCATGAAGGTGGATCTCAATACC 57.704 43.478 0.00 0.00 0.00 2.73
326 327 3.819564 TGAAGGTGGATCTCAATACCG 57.180 47.619 0.00 0.00 38.24 4.02
327 328 3.104512 TGAAGGTGGATCTCAATACCGT 58.895 45.455 0.00 0.00 38.24 4.83
328 329 3.118775 TGAAGGTGGATCTCAATACCGTG 60.119 47.826 0.00 0.00 38.24 4.94
329 330 2.467880 AGGTGGATCTCAATACCGTGT 58.532 47.619 0.00 0.00 38.24 4.49
330 331 2.431057 AGGTGGATCTCAATACCGTGTC 59.569 50.000 0.00 0.00 38.24 3.67
331 332 2.460918 GTGGATCTCAATACCGTGTCG 58.539 52.381 0.00 0.00 0.00 4.35
332 333 1.202371 TGGATCTCAATACCGTGTCGC 60.202 52.381 0.00 0.00 0.00 5.19
333 334 1.488527 GATCTCAATACCGTGTCGCC 58.511 55.000 0.00 0.00 0.00 5.54
334 335 0.821517 ATCTCAATACCGTGTCGCCA 59.178 50.000 0.00 0.00 0.00 5.69
335 336 0.604073 TCTCAATACCGTGTCGCCAA 59.396 50.000 0.00 0.00 0.00 4.52
336 337 0.999406 CTCAATACCGTGTCGCCAAG 59.001 55.000 0.00 0.00 0.00 3.61
337 338 0.390603 TCAATACCGTGTCGCCAAGG 60.391 55.000 0.00 0.00 44.80 3.61
338 339 0.390603 CAATACCGTGTCGCCAAGGA 60.391 55.000 5.18 0.00 42.22 3.36
339 340 0.322322 AATACCGTGTCGCCAAGGAA 59.678 50.000 5.18 0.00 42.22 3.36
340 341 0.108329 ATACCGTGTCGCCAAGGAAG 60.108 55.000 5.18 0.00 42.22 3.46
341 342 1.180456 TACCGTGTCGCCAAGGAAGA 61.180 55.000 5.18 0.00 42.22 2.87
342 343 1.738099 CCGTGTCGCCAAGGAAGAG 60.738 63.158 0.00 0.00 42.22 2.85
343 344 1.738099 CGTGTCGCCAAGGAAGAGG 60.738 63.158 0.00 0.00 0.00 3.69
348 349 2.747855 GCCAAGGAAGAGGCCGTG 60.748 66.667 0.00 0.00 45.18 4.94
350 351 2.750350 CAAGGAAGAGGCCGTGGT 59.250 61.111 0.00 0.00 34.34 4.16
351 352 1.073199 CAAGGAAGAGGCCGTGGTT 59.927 57.895 0.00 0.00 34.34 3.67
352 353 0.955919 CAAGGAAGAGGCCGTGGTTC 60.956 60.000 0.00 0.00 34.34 3.62
353 354 1.128188 AAGGAAGAGGCCGTGGTTCT 61.128 55.000 0.00 0.00 0.00 3.01
354 355 0.252103 AGGAAGAGGCCGTGGTTCTA 60.252 55.000 0.00 0.00 0.00 2.10
355 356 0.175989 GGAAGAGGCCGTGGTTCTAG 59.824 60.000 0.00 0.00 0.00 2.43
356 357 1.183549 GAAGAGGCCGTGGTTCTAGA 58.816 55.000 0.00 0.00 0.00 2.43
357 358 1.549170 GAAGAGGCCGTGGTTCTAGAA 59.451 52.381 0.00 0.00 0.00 2.10
358 359 1.187087 AGAGGCCGTGGTTCTAGAAG 58.813 55.000 5.12 0.00 0.00 2.85
359 360 0.896226 GAGGCCGTGGTTCTAGAAGT 59.104 55.000 5.12 0.00 0.00 3.01
360 361 1.275573 GAGGCCGTGGTTCTAGAAGTT 59.724 52.381 5.12 0.00 0.00 2.66
361 362 1.002087 AGGCCGTGGTTCTAGAAGTTG 59.998 52.381 5.12 0.00 0.00 3.16
362 363 0.796927 GCCGTGGTTCTAGAAGTTGC 59.203 55.000 5.12 1.28 0.00 4.17
363 364 1.876416 GCCGTGGTTCTAGAAGTTGCA 60.876 52.381 5.12 0.00 0.00 4.08
364 365 2.069273 CCGTGGTTCTAGAAGTTGCAG 58.931 52.381 5.12 0.00 0.00 4.41
365 366 2.069273 CGTGGTTCTAGAAGTTGCAGG 58.931 52.381 5.12 0.00 0.00 4.85
366 367 1.807142 GTGGTTCTAGAAGTTGCAGGC 59.193 52.381 5.12 0.00 0.00 4.85
367 368 1.271379 TGGTTCTAGAAGTTGCAGGCC 60.271 52.381 5.12 0.00 0.00 5.19
368 369 1.271379 GGTTCTAGAAGTTGCAGGCCA 60.271 52.381 5.01 0.00 0.00 5.36
369 370 2.504367 GTTCTAGAAGTTGCAGGCCAA 58.496 47.619 5.01 0.00 0.00 4.52
376 377 3.368822 TTGCAGGCCAACATGCTC 58.631 55.556 15.02 0.00 42.98 4.26
377 378 1.531128 TTGCAGGCCAACATGCTCA 60.531 52.632 15.02 0.42 42.98 4.26
378 379 1.114119 TTGCAGGCCAACATGCTCAA 61.114 50.000 15.02 0.46 42.98 3.02
379 380 1.214589 GCAGGCCAACATGCTCAAG 59.785 57.895 5.01 0.00 39.38 3.02
380 381 1.530013 GCAGGCCAACATGCTCAAGT 61.530 55.000 5.01 0.00 39.38 3.16
381 382 0.963962 CAGGCCAACATGCTCAAGTT 59.036 50.000 5.01 0.00 0.00 2.66
382 383 1.068055 CAGGCCAACATGCTCAAGTTC 60.068 52.381 5.01 0.00 0.00 3.01
383 384 0.961019 GGCCAACATGCTCAAGTTCA 59.039 50.000 0.00 0.00 0.00 3.18
384 385 1.336240 GGCCAACATGCTCAAGTTCAC 60.336 52.381 0.00 0.00 0.00 3.18
385 386 1.336240 GCCAACATGCTCAAGTTCACC 60.336 52.381 0.00 0.00 0.00 4.02
386 387 1.069022 CCAACATGCTCAAGTTCACCG 60.069 52.381 0.00 0.00 0.00 4.94
387 388 1.872952 CAACATGCTCAAGTTCACCGA 59.127 47.619 0.00 0.00 0.00 4.69
388 389 1.512926 ACATGCTCAAGTTCACCGAC 58.487 50.000 0.00 0.00 0.00 4.79
389 390 0.439985 CATGCTCAAGTTCACCGACG 59.560 55.000 0.00 0.00 0.00 5.12
390 391 0.317160 ATGCTCAAGTTCACCGACGA 59.683 50.000 0.00 0.00 0.00 4.20
391 392 0.318699 TGCTCAAGTTCACCGACGAG 60.319 55.000 0.00 0.00 0.00 4.18
392 393 0.318784 GCTCAAGTTCACCGACGAGT 60.319 55.000 0.00 0.00 0.00 4.18
393 394 1.409412 CTCAAGTTCACCGACGAGTG 58.591 55.000 0.00 3.12 39.20 3.51
394 395 1.001706 CTCAAGTTCACCGACGAGTGA 60.002 52.381 13.06 13.06 44.89 3.41
395 396 1.611977 TCAAGTTCACCGACGAGTGAT 59.388 47.619 16.40 4.17 45.80 3.06
396 397 1.986378 CAAGTTCACCGACGAGTGATC 59.014 52.381 16.40 15.37 45.80 2.92
397 398 1.535833 AGTTCACCGACGAGTGATCT 58.464 50.000 16.40 16.84 45.80 2.75
398 399 1.469308 AGTTCACCGACGAGTGATCTC 59.531 52.381 16.40 11.49 45.80 2.75
406 407 2.583593 GAGTGATCTCGTGGCCGC 60.584 66.667 6.11 6.11 0.00 6.53
407 408 4.498520 AGTGATCTCGTGGCCGCG 62.499 66.667 32.48 32.48 0.00 6.46
408 409 4.492160 GTGATCTCGTGGCCGCGA 62.492 66.667 36.75 36.75 39.22 5.87
416 417 3.112709 GTGGCCGCGAGTGACTTC 61.113 66.667 8.23 0.00 0.00 3.01
417 418 4.373116 TGGCCGCGAGTGACTTCC 62.373 66.667 8.23 0.00 0.00 3.46
418 419 4.070552 GGCCGCGAGTGACTTCCT 62.071 66.667 8.23 0.00 0.00 3.36
419 420 2.048127 GCCGCGAGTGACTTCCTT 60.048 61.111 8.23 0.00 0.00 3.36
420 421 1.668151 GCCGCGAGTGACTTCCTTT 60.668 57.895 8.23 0.00 0.00 3.11
421 422 1.228657 GCCGCGAGTGACTTCCTTTT 61.229 55.000 8.23 0.00 0.00 2.27
422 423 1.226746 CCGCGAGTGACTTCCTTTTT 58.773 50.000 8.23 0.00 0.00 1.94
440 441 3.617540 TTTTGTATGTCGGCTTGTGTG 57.382 42.857 0.00 0.00 0.00 3.82
441 442 0.871722 TTGTATGTCGGCTTGTGTGC 59.128 50.000 0.00 0.00 0.00 4.57
442 443 0.034756 TGTATGTCGGCTTGTGTGCT 59.965 50.000 0.00 0.00 0.00 4.40
443 444 0.443869 GTATGTCGGCTTGTGTGCTG 59.556 55.000 0.00 0.00 40.46 4.41
444 445 0.673333 TATGTCGGCTTGTGTGCTGG 60.673 55.000 0.00 0.00 39.62 4.85
445 446 4.030452 GTCGGCTTGTGTGCTGGC 62.030 66.667 0.00 0.00 39.62 4.85
448 449 3.677648 GGCTTGTGTGCTGGCCTG 61.678 66.667 3.32 4.26 41.20 4.85
449 450 2.595463 GCTTGTGTGCTGGCCTGA 60.595 61.111 14.77 0.00 0.00 3.86
450 451 2.912624 GCTTGTGTGCTGGCCTGAC 61.913 63.158 14.77 9.24 0.00 3.51
451 452 2.203337 TTGTGTGCTGGCCTGACC 60.203 61.111 14.77 2.91 39.84 4.02
453 454 2.980233 GTGTGCTGGCCTGACCAC 60.980 66.667 14.77 14.07 46.36 4.16
454 455 4.624364 TGTGCTGGCCTGACCACG 62.624 66.667 14.77 0.00 46.36 4.94
477 478 2.621000 GCGATGGCGTGATCGAAC 59.379 61.111 18.57 0.00 46.72 3.95
478 479 1.878522 GCGATGGCGTGATCGAACT 60.879 57.895 18.57 0.00 46.72 3.01
479 480 1.812214 GCGATGGCGTGATCGAACTC 61.812 60.000 18.57 0.00 46.72 3.01
480 481 0.525455 CGATGGCGTGATCGAACTCA 60.525 55.000 11.40 0.00 46.72 3.41
481 482 1.640428 GATGGCGTGATCGAACTCAA 58.360 50.000 0.00 0.00 39.71 3.02
482 483 1.590238 GATGGCGTGATCGAACTCAAG 59.410 52.381 0.00 0.00 39.71 3.02
483 484 0.317160 TGGCGTGATCGAACTCAAGT 59.683 50.000 4.31 0.00 39.71 3.16
484 485 1.270094 TGGCGTGATCGAACTCAAGTT 60.270 47.619 4.31 0.00 41.64 2.66
511 512 3.510388 TTTTGTGTGCCGATTCAAACA 57.490 38.095 0.00 0.00 32.68 2.83
512 513 3.510388 TTTGTGTGCCGATTCAAACAA 57.490 38.095 4.61 4.61 41.11 2.83
513 514 3.510388 TTGTGTGCCGATTCAAACAAA 57.490 38.095 5.83 0.00 40.22 2.83
514 515 2.803451 TGTGTGCCGATTCAAACAAAC 58.197 42.857 0.00 0.00 31.67 2.93
515 516 2.164422 TGTGTGCCGATTCAAACAAACA 59.836 40.909 0.00 0.00 31.67 2.83
516 517 3.182967 GTGTGCCGATTCAAACAAACAA 58.817 40.909 0.00 0.00 0.00 2.83
517 518 3.614616 GTGTGCCGATTCAAACAAACAAA 59.385 39.130 0.00 0.00 0.00 2.83
518 519 4.092091 GTGTGCCGATTCAAACAAACAAAA 59.908 37.500 0.00 0.00 0.00 2.44
519 520 4.690748 TGTGCCGATTCAAACAAACAAAAA 59.309 33.333 0.00 0.00 0.00 1.94
539 540 6.864560 AAAAACGAACAAAAGTTGCTCTAC 57.135 33.333 0.00 0.00 0.00 2.59
540 541 5.554822 AAACGAACAAAAGTTGCTCTACA 57.445 34.783 0.00 0.00 0.00 2.74
541 542 5.751243 AACGAACAAAAGTTGCTCTACAT 57.249 34.783 0.00 0.00 0.00 2.29
676 680 2.280592 AACCGAGTGGAACCGTGC 60.281 61.111 0.00 0.00 37.80 5.34
764 768 2.050442 CCGCAAAGGAACGCCAAC 60.050 61.111 0.00 0.00 45.00 3.77
784 788 2.034221 GAACTCACCCACAGCCCC 59.966 66.667 0.00 0.00 0.00 5.80
785 789 3.901797 GAACTCACCCACAGCCCCG 62.902 68.421 0.00 0.00 0.00 5.73
815 819 1.612950 CAGATCCCAGACGGAGATCAG 59.387 57.143 0.00 0.00 46.60 2.90
1296 1312 4.499116 CTCCCGGACCCATCCCCT 62.499 72.222 0.73 0.00 42.83 4.79
1302 1318 4.191015 GACCCATCCCCTTCCGCC 62.191 72.222 0.00 0.00 0.00 6.13
1353 1369 2.357034 GTCTTCAACCGCCAGCGA 60.357 61.111 14.67 0.00 42.83 4.93
1404 1420 2.924290 GCAGAAGTCCGTTGTCATACTC 59.076 50.000 0.00 0.00 0.00 2.59
1481 1497 0.323302 TGCTTCGACATAGGCCACAA 59.677 50.000 5.01 0.00 0.00 3.33
1482 1498 0.727398 GCTTCGACATAGGCCACAAC 59.273 55.000 5.01 0.00 0.00 3.32
1683 1699 1.471287 GATGCTGATCTGTTTGCTGCA 59.529 47.619 0.00 0.00 40.02 4.41
1860 1876 5.462398 CAGGCCGTACTTTACTATTCATGAC 59.538 44.000 0.00 0.00 0.00 3.06
1950 1966 3.304057 CGAACTTGTTTTTCCTGAGGAGC 60.304 47.826 0.00 0.00 31.21 4.70
2256 2272 0.324614 TCATTGATGCCGGTGTGTCT 59.675 50.000 1.90 0.00 0.00 3.41
2320 2336 0.678048 GAGGCGGCATTTCTTGGAGT 60.678 55.000 13.08 0.00 0.00 3.85
2394 2410 2.989571 ACTGGAAGGGAGTTCTCCATTT 59.010 45.455 17.72 12.23 39.30 2.32
2520 2536 8.879427 ATTGGTTGGATTTATATAGGTAAGCC 57.121 34.615 0.00 0.00 0.00 4.35
2521 2537 6.469410 TGGTTGGATTTATATAGGTAAGCCG 58.531 40.000 0.00 0.00 40.50 5.52
2540 2557 3.340034 CCGTAAGCCAGAACCACATTTA 58.660 45.455 0.00 0.00 0.00 1.40
2611 2628 5.183904 ACAGGGATTCACAAGCTAACATTTC 59.816 40.000 0.00 0.00 0.00 2.17
2620 2637 6.202570 TCACAAGCTAACATTTCCATTTTTGC 59.797 34.615 0.00 0.00 0.00 3.68
2628 2645 5.435291 ACATTTCCATTTTTGCTTCACCAA 58.565 33.333 0.00 0.00 0.00 3.67
2633 2650 5.867330 TCCATTTTTGCTTCACCAATGATT 58.133 33.333 0.00 0.00 33.85 2.57
2712 2729 3.455328 GCTGCAGAGCAAGATCAGA 57.545 52.632 20.43 0.00 45.46 3.27
2750 2767 5.516996 CAAGCTCGCATGAATGTTGATATT 58.483 37.500 0.00 0.00 0.00 1.28
2876 2895 8.951787 TGCTTTCTTAAGTTAACTGTCACTTA 57.048 30.769 9.34 7.94 34.92 2.24
2877 2896 9.555727 TGCTTTCTTAAGTTAACTGTCACTTAT 57.444 29.630 9.34 0.00 35.80 1.73
2959 2978 7.043565 AGTCGTTTTCTGTTAGGACAAACTAA 58.956 34.615 0.00 0.00 34.85 2.24
2973 2992 7.856415 AGGACAAACTAAGAAGATAAGCTCAT 58.144 34.615 0.00 0.00 0.00 2.90
3042 3072 8.121305 AGACTGATCGATCTAAATCATAAGCT 57.879 34.615 25.02 9.80 31.79 3.74
3079 3109 2.698797 GGACTGCCTACACCTGCTATAA 59.301 50.000 0.00 0.00 0.00 0.98
3121 3153 2.942752 GCAGGATGAATGCCTCAGTTCA 60.943 50.000 0.00 0.00 39.69 3.18
3234 3270 3.632604 TGCAAGAAGAGGTCTATCCGTAG 59.367 47.826 0.00 0.00 41.99 3.51
3266 3302 2.357517 CTGCCAGGTCACCACGAC 60.358 66.667 0.00 0.00 44.57 4.34
3467 3503 8.854614 AGCAAAGAATCAATAGTGTAAGTCTT 57.145 30.769 0.00 0.00 0.00 3.01
3491 3527 1.079543 CCTCAGAACCTCACTGCCG 60.080 63.158 0.00 0.00 35.61 5.69
3553 3699 1.202698 CCCATCCTCGATCTTTGTCCC 60.203 57.143 0.00 0.00 0.00 4.46
3554 3700 1.202698 CCATCCTCGATCTTTGTCCCC 60.203 57.143 0.00 0.00 0.00 4.81
3603 3749 9.599322 CCATATCAAAATAAGAATTACACTCGC 57.401 33.333 0.00 0.00 30.46 5.03
3608 3754 2.736144 AAGAATTACACTCGCGGTCA 57.264 45.000 6.13 0.00 0.00 4.02
3612 3758 5.700722 AGAATTACACTCGCGGTCATATA 57.299 39.130 6.13 0.00 0.00 0.86
3921 4086 4.660789 GCATTTAATCAGATGCACCCTT 57.339 40.909 5.21 0.00 46.03 3.95
3922 4087 5.772825 GCATTTAATCAGATGCACCCTTA 57.227 39.130 5.21 0.00 46.03 2.69
3923 4088 6.147864 GCATTTAATCAGATGCACCCTTAA 57.852 37.500 5.21 0.00 46.03 1.85
3924 4089 6.752168 GCATTTAATCAGATGCACCCTTAAT 58.248 36.000 5.21 0.00 46.03 1.40
3925 4090 7.885297 GCATTTAATCAGATGCACCCTTAATA 58.115 34.615 5.21 0.00 46.03 0.98
3926 4091 7.809806 GCATTTAATCAGATGCACCCTTAATAC 59.190 37.037 5.21 0.00 46.03 1.89
3927 4092 9.071276 CATTTAATCAGATGCACCCTTAATACT 57.929 33.333 0.00 0.00 0.00 2.12
3928 4093 9.646522 ATTTAATCAGATGCACCCTTAATACTT 57.353 29.630 0.00 0.00 0.00 2.24
3929 4094 9.474313 TTTAATCAGATGCACCCTTAATACTTT 57.526 29.630 0.00 0.00 0.00 2.66
3930 4095 7.961326 AATCAGATGCACCCTTAATACTTTT 57.039 32.000 0.00 0.00 0.00 2.27
3931 4096 7.961326 ATCAGATGCACCCTTAATACTTTTT 57.039 32.000 0.00 0.00 0.00 1.94
4001 4166 5.271598 TCCTGCAATAAAATCCAATGAGGT 58.728 37.500 0.00 0.00 39.02 3.85
4098 4265 7.912250 CACCAGAAAACATTAATCAGTCTATGC 59.088 37.037 0.00 0.00 0.00 3.14
4150 4317 9.911788 ATCATTTTGAGTATGAACTATTCTGGT 57.088 29.630 0.00 0.00 35.56 4.00
4191 4358 4.022464 TGAACGAACCACATGTTTTGTC 57.978 40.909 0.00 0.00 37.29 3.18
4209 4376 5.913137 TTGTCTGACTGGTTTTGTTGATT 57.087 34.783 9.51 0.00 0.00 2.57
4312 4479 3.433615 CACTGGGATTTCGTTCTGTCTTC 59.566 47.826 0.00 0.00 0.00 2.87
4353 4731 2.463876 GGTAATCGGTAGTAACGGCAC 58.536 52.381 7.93 3.41 0.00 5.01
4357 4735 1.153706 CGGTAGTAACGGCACTGGG 60.154 63.158 0.00 0.00 0.00 4.45
4398 4776 2.603075 AGCATTAGGCCAACTCCAAA 57.397 45.000 5.01 0.00 46.50 3.28
4399 4777 3.105959 AGCATTAGGCCAACTCCAAAT 57.894 42.857 5.01 0.00 46.50 2.32
4409 4788 0.835971 AACTCCAAATGGCAACCCCC 60.836 55.000 0.00 0.00 34.44 5.40
4458 4837 1.757118 TCCATTTTGGTCGGCAAAACA 59.243 42.857 0.00 0.00 39.03 2.83
4566 4946 4.935205 GCAAATTTGACCCAAATCTAACCC 59.065 41.667 22.31 0.00 42.32 4.11
4576 4956 6.741724 ACCCAAATCTAACCCAAATAGACAT 58.258 36.000 0.00 0.00 32.50 3.06
4726 5135 0.160182 GTCGTTTAGTTGCCGTCGTG 59.840 55.000 0.00 0.00 0.00 4.35
4730 5139 0.940519 TTTAGTTGCCGTCGTGGTCG 60.941 55.000 0.00 0.00 41.21 4.79
4741 5150 2.028484 GTGGTCGTCCTTGTCGCA 59.972 61.111 0.00 0.00 34.23 5.10
4862 5293 2.355481 GACGGTGACCACGTGTCC 60.355 66.667 15.65 10.08 45.68 4.02
4891 5322 2.438975 CACAGGCGGCATGGACAT 60.439 61.111 19.53 0.00 0.00 3.06
4900 5331 0.178068 GGCATGGACATGTACTCCGT 59.822 55.000 10.05 0.00 40.80 4.69
4923 5356 1.007271 CACGGCACTGTCTTCGTCT 60.007 57.895 0.00 0.00 33.31 4.18
4955 5388 4.653888 CCGACCAAGGCCGGGTTT 62.654 66.667 21.17 1.68 41.89 3.27
4960 5393 1.606313 CCAAGGCCGGGTTTCATGT 60.606 57.895 2.18 0.00 0.00 3.21
4972 5411 2.463589 TTTCATGTCGCGGGCTCCTT 62.464 55.000 6.13 0.00 0.00 3.36
4984 5423 2.960688 GCTCCTTCGGCACCTCCTT 61.961 63.158 0.00 0.00 0.00 3.36
4990 5429 1.841302 TTCGGCACCTCCTTCTGCAT 61.841 55.000 0.00 0.00 34.90 3.96
5079 5524 1.118356 GGCCATCATCTCTCCGAGGT 61.118 60.000 0.00 0.00 0.00 3.85
5469 5917 2.674177 CGACCGACAAAGTAGGATTGCT 60.674 50.000 3.27 0.00 32.67 3.91
5492 5940 1.296392 CAGGTCGTGCTCATCCCAA 59.704 57.895 0.00 0.00 0.00 4.12
5536 5984 3.814268 GACGGCGTACCTGCGGTA 61.814 66.667 14.74 3.72 46.69 4.02
6041 6538 2.751837 GGTGGCTGGCAAGTAGGC 60.752 66.667 5.14 0.00 44.50 3.93
6078 6577 1.001887 TAAATGTGGGCGGTGGGAC 60.002 57.895 0.00 0.00 0.00 4.46
6339 6848 8.293867 ACAAGCGTATAACTTTTTGCTGAATAA 58.706 29.630 0.00 0.00 32.14 1.40
6366 6875 9.685276 TGATGTGACACTTCAATAATATCCTTT 57.315 29.630 18.88 0.00 30.60 3.11
6402 6915 6.620877 TGTTTGATACCAGTCTACCATTCT 57.379 37.500 0.00 0.00 0.00 2.40
6403 6916 6.640518 TGTTTGATACCAGTCTACCATTCTC 58.359 40.000 0.00 0.00 0.00 2.87
6435 6948 3.072038 TGATAGACTGGAGGAATGCATGG 59.928 47.826 0.00 0.00 0.00 3.66
6528 7042 4.041691 ACTGTAACAGCCCCCATGATATAC 59.958 45.833 0.00 0.00 34.37 1.47
6608 7123 9.734620 GCATGTTAAAATGTTTCAGCATATAGA 57.265 29.630 7.46 0.00 0.00 1.98
6770 7291 1.831580 GCCAGAAACTGAAGGCAGAT 58.168 50.000 0.00 0.00 45.17 2.90
7141 7668 8.573035 TGTATGATTCCACTAAAACAAGTTTCC 58.427 33.333 0.00 0.00 31.45 3.13
7368 7903 7.703058 AATTACTGGTAGCTTGCTATTTTGT 57.297 32.000 5.59 5.90 0.00 2.83
7369 7904 7.703058 ATTACTGGTAGCTTGCTATTTTGTT 57.297 32.000 5.59 0.00 0.00 2.83
7373 7908 6.265422 ACTGGTAGCTTGCTATTTTGTTCTTT 59.735 34.615 5.59 0.00 0.00 2.52
7517 8053 5.528043 CTGACATGGTATTCTCAGCTACT 57.472 43.478 0.00 0.00 0.00 2.57
7518 8054 5.521906 TGACATGGTATTCTCAGCTACTC 57.478 43.478 0.00 0.00 0.00 2.59
7519 8055 4.342378 TGACATGGTATTCTCAGCTACTCC 59.658 45.833 0.00 0.00 0.00 3.85
7520 8056 3.643792 ACATGGTATTCTCAGCTACTCCC 59.356 47.826 0.00 0.00 0.00 4.30
7521 8057 3.689872 TGGTATTCTCAGCTACTCCCT 57.310 47.619 0.00 0.00 0.00 4.20
7522 8058 3.567397 TGGTATTCTCAGCTACTCCCTC 58.433 50.000 0.00 0.00 0.00 4.30
7523 8059 2.894765 GGTATTCTCAGCTACTCCCTCC 59.105 54.545 0.00 0.00 0.00 4.30
7524 8060 1.698506 ATTCTCAGCTACTCCCTCCG 58.301 55.000 0.00 0.00 0.00 4.63
7525 8061 0.331954 TTCTCAGCTACTCCCTCCGT 59.668 55.000 0.00 0.00 0.00 4.69
7526 8062 0.331954 TCTCAGCTACTCCCTCCGTT 59.668 55.000 0.00 0.00 0.00 4.44
7527 8063 0.741915 CTCAGCTACTCCCTCCGTTC 59.258 60.000 0.00 0.00 0.00 3.95
7528 8064 0.683504 TCAGCTACTCCCTCCGTTCC 60.684 60.000 0.00 0.00 0.00 3.62
7529 8065 0.970937 CAGCTACTCCCTCCGTTCCA 60.971 60.000 0.00 0.00 0.00 3.53
7530 8066 0.252103 AGCTACTCCCTCCGTTCCAA 60.252 55.000 0.00 0.00 0.00 3.53
7531 8067 0.611714 GCTACTCCCTCCGTTCCAAA 59.388 55.000 0.00 0.00 0.00 3.28
7532 8068 1.002773 GCTACTCCCTCCGTTCCAAAA 59.997 52.381 0.00 0.00 0.00 2.44
7533 8069 2.355818 GCTACTCCCTCCGTTCCAAAAT 60.356 50.000 0.00 0.00 0.00 1.82
7534 8070 3.118519 GCTACTCCCTCCGTTCCAAAATA 60.119 47.826 0.00 0.00 0.00 1.40
7535 8071 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
7536 8072 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
7537 8073 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
7538 8074 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
7539 8075 3.118038 TCCCTCCGTTCCAAAATAGATGG 60.118 47.826 0.00 0.00 39.41 3.51
7540 8076 2.618709 CCTCCGTTCCAAAATAGATGGC 59.381 50.000 0.00 0.00 37.88 4.40
7541 8077 2.618709 CTCCGTTCCAAAATAGATGGCC 59.381 50.000 0.00 0.00 37.88 5.36
7542 8078 1.681264 CCGTTCCAAAATAGATGGCCC 59.319 52.381 0.00 0.00 37.88 5.80
7543 8079 2.374184 CGTTCCAAAATAGATGGCCCA 58.626 47.619 0.00 0.00 37.88 5.36
7544 8080 2.757868 CGTTCCAAAATAGATGGCCCAA 59.242 45.455 0.00 0.00 37.88 4.12
7545 8081 3.428862 CGTTCCAAAATAGATGGCCCAAC 60.429 47.826 0.00 0.00 37.88 3.77
7546 8082 3.756082 TCCAAAATAGATGGCCCAACT 57.244 42.857 0.00 0.00 37.88 3.16
7547 8083 4.059773 TCCAAAATAGATGGCCCAACTT 57.940 40.909 0.00 0.00 37.88 2.66
7548 8084 4.424842 TCCAAAATAGATGGCCCAACTTT 58.575 39.130 0.00 0.00 37.88 2.66
7549 8085 5.584913 TCCAAAATAGATGGCCCAACTTTA 58.415 37.500 0.00 0.00 37.88 1.85
7550 8086 6.201591 TCCAAAATAGATGGCCCAACTTTAT 58.798 36.000 0.00 0.00 37.88 1.40
7551 8087 7.358263 TCCAAAATAGATGGCCCAACTTTATA 58.642 34.615 0.00 0.00 37.88 0.98
7552 8088 7.286775 TCCAAAATAGATGGCCCAACTTTATAC 59.713 37.037 0.00 0.00 37.88 1.47
7553 8089 7.287696 CCAAAATAGATGGCCCAACTTTATACT 59.712 37.037 0.00 0.00 0.00 2.12
7554 8090 9.349713 CAAAATAGATGGCCCAACTTTATACTA 57.650 33.333 0.00 0.00 0.00 1.82
7555 8091 9.930158 AAAATAGATGGCCCAACTTTATACTAA 57.070 29.630 0.00 0.00 0.00 2.24
7556 8092 9.930158 AAATAGATGGCCCAACTTTATACTAAA 57.070 29.630 0.00 0.00 0.00 1.85
7557 8093 9.574516 AATAGATGGCCCAACTTTATACTAAAG 57.425 33.333 0.00 5.34 0.00 1.85
7558 8094 6.970191 AGATGGCCCAACTTTATACTAAAGT 58.030 36.000 0.00 6.49 41.82 2.66
7560 8096 8.554011 AGATGGCCCAACTTTATACTAAAGTTA 58.446 33.333 19.25 8.66 45.57 2.24
7561 8097 8.747538 ATGGCCCAACTTTATACTAAAGTTAG 57.252 34.615 19.25 14.30 45.57 2.34
7562 8098 7.692172 TGGCCCAACTTTATACTAAAGTTAGT 58.308 34.615 19.25 8.67 45.57 2.24
7563 8099 8.824783 TGGCCCAACTTTATACTAAAGTTAGTA 58.175 33.333 19.25 12.18 45.57 1.82
7586 8122 9.408648 AGTATAAAGTTGGGTCATCTATTTTGG 57.591 33.333 0.00 0.00 0.00 3.28
7587 8123 9.403583 GTATAAAGTTGGGTCATCTATTTTGGA 57.596 33.333 0.00 0.00 0.00 3.53
7588 8124 8.893563 ATAAAGTTGGGTCATCTATTTTGGAA 57.106 30.769 0.00 0.00 0.00 3.53
7589 8125 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
7590 8126 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
7591 8127 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
7592 8128 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
7593 8129 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
7594 8130 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
7595 8131 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
7596 8132 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
7597 8133 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
7598 8134 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
7599 8135 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
7600 8136 3.629142 ATTTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
7601 8137 2.019807 TTTGGAACGGAGGGAGTAGT 57.980 50.000 0.00 0.00 0.00 2.73
7602 8138 2.905415 TTGGAACGGAGGGAGTAGTA 57.095 50.000 0.00 0.00 0.00 1.82
7656 8192 6.430864 TCAGGATTAAGGGCATGTTTATTCA 58.569 36.000 0.00 0.00 0.00 2.57
7802 8338 8.713271 GTTTGTTGGAGTATTAGAAGTTCAGAG 58.287 37.037 5.50 0.00 0.00 3.35
7859 8395 5.700402 AGCCTGTATCTGAATGTAGGTTT 57.300 39.130 0.00 0.00 0.00 3.27
7906 8442 5.364778 TGCTACTCATGTTACAGTTGTGTT 58.635 37.500 0.00 0.00 38.19 3.32
7907 8443 5.465390 TGCTACTCATGTTACAGTTGTGTTC 59.535 40.000 0.00 0.00 38.19 3.18
7908 8444 5.465390 GCTACTCATGTTACAGTTGTGTTCA 59.535 40.000 0.00 0.00 38.19 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.360370 TCATACCATAGGCTAGCTTTTAGG 57.640 41.667 15.72 11.92 0.00 2.69
1 2 7.880195 ACAATCATACCATAGGCTAGCTTTTAG 59.120 37.037 15.72 3.93 0.00 1.85
2 3 7.745717 ACAATCATACCATAGGCTAGCTTTTA 58.254 34.615 15.72 5.69 0.00 1.52
3 4 6.605119 ACAATCATACCATAGGCTAGCTTTT 58.395 36.000 15.72 0.00 0.00 2.27
4 5 6.192970 ACAATCATACCATAGGCTAGCTTT 57.807 37.500 15.72 6.10 0.00 3.51
5 6 5.832539 ACAATCATACCATAGGCTAGCTT 57.167 39.130 15.72 10.11 0.00 3.74
6 7 5.072329 ACAACAATCATACCATAGGCTAGCT 59.928 40.000 15.72 3.22 0.00 3.32
7 8 5.308825 ACAACAATCATACCATAGGCTAGC 58.691 41.667 6.04 6.04 0.00 3.42
8 9 7.220030 AGAACAACAATCATACCATAGGCTAG 58.780 38.462 0.00 0.00 0.00 3.42
9 10 7.136822 AGAACAACAATCATACCATAGGCTA 57.863 36.000 0.00 0.00 0.00 3.93
10 11 6.006275 AGAACAACAATCATACCATAGGCT 57.994 37.500 0.00 0.00 0.00 4.58
11 12 7.986085 ATAGAACAACAATCATACCATAGGC 57.014 36.000 0.00 0.00 0.00 3.93
16 17 9.679661 ACAACATATAGAACAACAATCATACCA 57.320 29.630 0.00 0.00 0.00 3.25
21 22 9.378551 GTAGGACAACATATAGAACAACAATCA 57.621 33.333 0.00 0.00 0.00 2.57
22 23 8.540492 CGTAGGACAACATATAGAACAACAATC 58.460 37.037 0.00 0.00 0.00 2.67
23 24 8.420374 CGTAGGACAACATATAGAACAACAAT 57.580 34.615 0.00 0.00 0.00 2.71
24 25 7.821595 CGTAGGACAACATATAGAACAACAA 57.178 36.000 0.00 0.00 0.00 2.83
44 45 2.573941 CGGAGGGTTTTAGTCCGTAG 57.426 55.000 1.80 0.00 46.66 3.51
63 64 4.220163 CCCTCTCCGGTGTCTATATAAACC 59.780 50.000 0.00 0.68 0.00 3.27
64 65 4.831710 ACCCTCTCCGGTGTCTATATAAAC 59.168 45.833 0.00 0.00 33.77 2.01
65 66 5.070823 ACCCTCTCCGGTGTCTATATAAA 57.929 43.478 0.00 0.00 33.77 1.40
66 67 4.736611 ACCCTCTCCGGTGTCTATATAA 57.263 45.455 0.00 0.00 33.77 0.98
67 68 4.736611 AACCCTCTCCGGTGTCTATATA 57.263 45.455 0.00 0.00 35.83 0.86
68 69 3.614568 AACCCTCTCCGGTGTCTATAT 57.385 47.619 0.00 0.00 35.83 0.86
69 70 3.181436 CCTAACCCTCTCCGGTGTCTATA 60.181 52.174 0.00 0.00 35.83 1.31
70 71 2.424523 CCTAACCCTCTCCGGTGTCTAT 60.425 54.545 0.00 0.00 35.83 1.98
71 72 1.064166 CCTAACCCTCTCCGGTGTCTA 60.064 57.143 0.00 0.00 35.83 2.59
72 73 0.324460 CCTAACCCTCTCCGGTGTCT 60.324 60.000 0.00 0.00 35.83 3.41
73 74 1.328430 CCCTAACCCTCTCCGGTGTC 61.328 65.000 0.00 0.00 35.83 3.67
74 75 1.305887 CCCTAACCCTCTCCGGTGT 60.306 63.158 0.00 0.00 35.83 4.16
75 76 0.908180 AACCCTAACCCTCTCCGGTG 60.908 60.000 0.00 0.00 35.83 4.94
76 77 0.712380 TAACCCTAACCCTCTCCGGT 59.288 55.000 0.00 0.00 37.93 5.28
77 78 1.117994 GTAACCCTAACCCTCTCCGG 58.882 60.000 0.00 0.00 0.00 5.14
78 79 1.479730 GTGTAACCCTAACCCTCTCCG 59.520 57.143 0.00 0.00 0.00 4.63
79 80 2.543635 TGTGTAACCCTAACCCTCTCC 58.456 52.381 0.00 0.00 34.36 3.71
80 81 4.041321 ACTTTGTGTAACCCTAACCCTCTC 59.959 45.833 0.00 0.00 34.36 3.20
81 82 3.978672 ACTTTGTGTAACCCTAACCCTCT 59.021 43.478 0.00 0.00 34.36 3.69
82 83 4.321718 GACTTTGTGTAACCCTAACCCTC 58.678 47.826 0.00 0.00 34.36 4.30
83 84 3.244318 CGACTTTGTGTAACCCTAACCCT 60.244 47.826 0.00 0.00 34.36 4.34
84 85 3.069289 CGACTTTGTGTAACCCTAACCC 58.931 50.000 0.00 0.00 34.36 4.11
85 86 3.069289 CCGACTTTGTGTAACCCTAACC 58.931 50.000 0.00 0.00 34.36 2.85
86 87 3.732212 ACCGACTTTGTGTAACCCTAAC 58.268 45.455 0.00 0.00 34.36 2.34
87 88 4.420522 AACCGACTTTGTGTAACCCTAA 57.579 40.909 0.00 0.00 34.36 2.69
88 89 4.343526 TGTAACCGACTTTGTGTAACCCTA 59.656 41.667 0.00 0.00 34.36 3.53
89 90 3.134442 TGTAACCGACTTTGTGTAACCCT 59.866 43.478 0.00 0.00 34.36 4.34
90 91 3.465871 TGTAACCGACTTTGTGTAACCC 58.534 45.455 0.00 0.00 34.36 4.11
91 92 5.445845 CATTGTAACCGACTTTGTGTAACC 58.554 41.667 0.00 0.00 34.36 2.85
92 93 5.007921 ACCATTGTAACCGACTTTGTGTAAC 59.992 40.000 0.00 0.00 37.35 2.50
93 94 5.124645 ACCATTGTAACCGACTTTGTGTAA 58.875 37.500 0.00 0.00 0.00 2.41
94 95 4.706035 ACCATTGTAACCGACTTTGTGTA 58.294 39.130 0.00 0.00 0.00 2.90
95 96 3.547746 ACCATTGTAACCGACTTTGTGT 58.452 40.909 0.00 0.00 0.00 3.72
96 97 4.153475 CCTACCATTGTAACCGACTTTGTG 59.847 45.833 0.00 0.00 0.00 3.33
97 98 4.040706 TCCTACCATTGTAACCGACTTTGT 59.959 41.667 0.00 0.00 0.00 2.83
98 99 4.571919 TCCTACCATTGTAACCGACTTTG 58.428 43.478 0.00 0.00 0.00 2.77
99 100 4.529377 TCTCCTACCATTGTAACCGACTTT 59.471 41.667 0.00 0.00 0.00 2.66
100 101 4.091549 TCTCCTACCATTGTAACCGACTT 58.908 43.478 0.00 0.00 0.00 3.01
101 102 3.705051 TCTCCTACCATTGTAACCGACT 58.295 45.455 0.00 0.00 0.00 4.18
102 103 4.667519 ATCTCCTACCATTGTAACCGAC 57.332 45.455 0.00 0.00 0.00 4.79
103 104 5.687166 AAATCTCCTACCATTGTAACCGA 57.313 39.130 0.00 0.00 0.00 4.69
104 105 6.342906 TGTAAATCTCCTACCATTGTAACCG 58.657 40.000 0.00 0.00 0.00 4.44
108 109 8.528643 CGGATATGTAAATCTCCTACCATTGTA 58.471 37.037 0.00 0.00 0.00 2.41
109 110 7.016268 ACGGATATGTAAATCTCCTACCATTGT 59.984 37.037 0.00 0.00 0.00 2.71
110 111 7.386851 ACGGATATGTAAATCTCCTACCATTG 58.613 38.462 0.00 0.00 0.00 2.82
111 112 7.554959 ACGGATATGTAAATCTCCTACCATT 57.445 36.000 0.00 0.00 0.00 3.16
112 113 8.840200 ATACGGATATGTAAATCTCCTACCAT 57.160 34.615 0.00 0.00 0.00 3.55
113 114 7.066645 CGATACGGATATGTAAATCTCCTACCA 59.933 40.741 0.00 0.00 0.00 3.25
114 115 7.416022 CGATACGGATATGTAAATCTCCTACC 58.584 42.308 0.00 0.00 0.00 3.18
115 116 6.911511 GCGATACGGATATGTAAATCTCCTAC 59.088 42.308 0.00 0.00 0.00 3.18
116 117 6.039047 GGCGATACGGATATGTAAATCTCCTA 59.961 42.308 0.00 0.00 0.00 2.94
117 118 5.163540 GGCGATACGGATATGTAAATCTCCT 60.164 44.000 0.00 0.00 0.00 3.69
118 119 5.041940 GGCGATACGGATATGTAAATCTCC 58.958 45.833 0.00 0.00 0.00 3.71
119 120 5.647589 TGGCGATACGGATATGTAAATCTC 58.352 41.667 0.00 0.00 0.00 2.75
120 121 5.654603 TGGCGATACGGATATGTAAATCT 57.345 39.130 0.00 0.00 0.00 2.40
121 122 5.220416 GCTTGGCGATACGGATATGTAAATC 60.220 44.000 0.00 0.00 0.00 2.17
122 123 4.630069 GCTTGGCGATACGGATATGTAAAT 59.370 41.667 0.00 0.00 0.00 1.40
123 124 3.991773 GCTTGGCGATACGGATATGTAAA 59.008 43.478 0.00 0.00 0.00 2.01
124 125 3.257375 AGCTTGGCGATACGGATATGTAA 59.743 43.478 0.00 0.00 0.00 2.41
125 126 2.823747 AGCTTGGCGATACGGATATGTA 59.176 45.455 0.00 0.00 0.00 2.29
126 127 1.618837 AGCTTGGCGATACGGATATGT 59.381 47.619 0.00 0.00 0.00 2.29
127 128 2.370281 AGCTTGGCGATACGGATATG 57.630 50.000 0.00 0.00 0.00 1.78
128 129 2.688507 CAAGCTTGGCGATACGGATAT 58.311 47.619 19.14 0.00 0.00 1.63
129 130 1.872237 GCAAGCTTGGCGATACGGATA 60.872 52.381 27.10 0.00 0.00 2.59
130 131 1.160329 GCAAGCTTGGCGATACGGAT 61.160 55.000 27.10 0.00 0.00 4.18
131 132 1.813753 GCAAGCTTGGCGATACGGA 60.814 57.895 27.10 0.00 0.00 4.69
132 133 2.709475 GCAAGCTTGGCGATACGG 59.291 61.111 27.10 0.00 0.00 4.02
133 134 2.709475 GGCAAGCTTGGCGATACG 59.291 61.111 33.68 4.49 43.97 3.06
149 150 2.232208 GGACTTTTCTTGGCATGGAAGG 59.768 50.000 16.00 10.60 0.00 3.46
150 151 2.232208 GGGACTTTTCTTGGCATGGAAG 59.768 50.000 12.46 12.46 0.00 3.46
151 152 2.158325 AGGGACTTTTCTTGGCATGGAA 60.158 45.455 0.00 0.00 27.25 3.53
152 153 1.428912 AGGGACTTTTCTTGGCATGGA 59.571 47.619 0.00 0.00 27.25 3.41
153 154 1.928868 AGGGACTTTTCTTGGCATGG 58.071 50.000 0.00 0.00 27.25 3.66
175 176 2.126580 GACTTCGTCCCGTGTCCG 60.127 66.667 0.00 0.00 0.00 4.79
176 177 0.388263 GAAGACTTCGTCCCGTGTCC 60.388 60.000 0.00 0.00 34.39 4.02
177 178 0.313043 TGAAGACTTCGTCCCGTGTC 59.687 55.000 10.56 0.00 32.18 3.67
178 179 0.748450 TTGAAGACTTCGTCCCGTGT 59.252 50.000 10.56 0.00 32.18 4.49
179 180 1.993370 GATTGAAGACTTCGTCCCGTG 59.007 52.381 10.56 0.00 32.18 4.94
180 181 1.893801 AGATTGAAGACTTCGTCCCGT 59.106 47.619 10.56 0.00 32.18 5.28
181 182 2.656560 AGATTGAAGACTTCGTCCCG 57.343 50.000 10.56 0.00 32.18 5.14
182 183 3.665190 ACAAGATTGAAGACTTCGTCCC 58.335 45.455 10.56 0.53 32.18 4.46
183 184 6.334202 AGATACAAGATTGAAGACTTCGTCC 58.666 40.000 10.56 2.18 32.18 4.79
184 185 7.820044 AAGATACAAGATTGAAGACTTCGTC 57.180 36.000 10.56 10.67 0.00 4.20
185 186 9.877178 ATAAAGATACAAGATTGAAGACTTCGT 57.123 29.630 10.56 1.87 0.00 3.85
194 195 9.434275 TCCTGGACTATAAAGATACAAGATTGA 57.566 33.333 0.00 0.00 0.00 2.57
198 199 8.871125 GGATTCCTGGACTATAAAGATACAAGA 58.129 37.037 0.00 0.00 0.00 3.02
199 200 7.815068 CGGATTCCTGGACTATAAAGATACAAG 59.185 40.741 0.00 0.00 0.00 3.16
200 201 7.256190 CCGGATTCCTGGACTATAAAGATACAA 60.256 40.741 0.00 0.00 41.53 2.41
201 202 6.210784 CCGGATTCCTGGACTATAAAGATACA 59.789 42.308 0.00 0.00 41.53 2.29
202 203 6.631962 CCGGATTCCTGGACTATAAAGATAC 58.368 44.000 0.00 0.00 41.53 2.24
203 204 5.187186 GCCGGATTCCTGGACTATAAAGATA 59.813 44.000 5.05 0.00 41.53 1.98
204 205 4.020128 GCCGGATTCCTGGACTATAAAGAT 60.020 45.833 5.05 0.00 41.53 2.40
205 206 3.323979 GCCGGATTCCTGGACTATAAAGA 59.676 47.826 5.05 0.00 41.53 2.52
206 207 3.325135 AGCCGGATTCCTGGACTATAAAG 59.675 47.826 5.05 0.00 41.53 1.85
207 208 3.071023 CAGCCGGATTCCTGGACTATAAA 59.929 47.826 5.05 0.00 41.53 1.40
208 209 2.632996 CAGCCGGATTCCTGGACTATAA 59.367 50.000 5.05 0.00 41.53 0.98
209 210 2.158370 TCAGCCGGATTCCTGGACTATA 60.158 50.000 5.05 0.00 41.53 1.31
210 211 1.051812 CAGCCGGATTCCTGGACTAT 58.948 55.000 5.05 0.00 41.53 2.12
211 212 0.032515 TCAGCCGGATTCCTGGACTA 60.033 55.000 5.05 0.00 41.53 2.59
212 213 0.909610 TTCAGCCGGATTCCTGGACT 60.910 55.000 5.05 9.78 41.53 3.85
213 214 0.462759 CTTCAGCCGGATTCCTGGAC 60.463 60.000 5.05 8.16 41.53 4.02
214 215 1.626356 CCTTCAGCCGGATTCCTGGA 61.626 60.000 5.05 0.00 41.53 3.86
215 216 1.153086 CCTTCAGCCGGATTCCTGG 60.153 63.158 5.05 5.27 41.93 4.45
216 217 0.830648 TACCTTCAGCCGGATTCCTG 59.169 55.000 5.05 2.32 0.00 3.86
217 218 1.807814 ATACCTTCAGCCGGATTCCT 58.192 50.000 5.05 0.00 0.00 3.36
218 219 2.633481 ACTATACCTTCAGCCGGATTCC 59.367 50.000 5.05 0.00 0.00 3.01
219 220 3.306156 GGACTATACCTTCAGCCGGATTC 60.306 52.174 5.05 0.00 0.00 2.52
220 221 2.633481 GGACTATACCTTCAGCCGGATT 59.367 50.000 5.05 0.00 0.00 3.01
221 222 2.249139 GGACTATACCTTCAGCCGGAT 58.751 52.381 5.05 0.00 0.00 4.18
222 223 1.700955 GGACTATACCTTCAGCCGGA 58.299 55.000 5.05 0.00 0.00 5.14
223 224 0.314302 CGGACTATACCTTCAGCCGG 59.686 60.000 0.00 0.00 34.08 6.13
224 225 0.314302 CCGGACTATACCTTCAGCCG 59.686 60.000 0.00 0.00 37.20 5.52
225 226 0.033642 GCCGGACTATACCTTCAGCC 59.966 60.000 5.05 0.00 0.00 4.85
226 227 0.033642 GGCCGGACTATACCTTCAGC 59.966 60.000 5.05 0.00 0.00 4.26
227 228 1.410004 TGGCCGGACTATACCTTCAG 58.590 55.000 9.82 0.00 0.00 3.02
228 229 1.968493 GATGGCCGGACTATACCTTCA 59.032 52.381 9.82 0.00 0.00 3.02
229 230 1.275573 GGATGGCCGGACTATACCTTC 59.724 57.143 9.82 4.83 0.00 3.46
230 231 1.349067 GGATGGCCGGACTATACCTT 58.651 55.000 9.82 0.00 0.00 3.50
231 232 3.068562 GGATGGCCGGACTATACCT 57.931 57.895 9.82 0.00 0.00 3.08
244 245 1.060163 ATTAGGGGGTGTCCGGATGG 61.060 60.000 7.81 0.00 36.01 3.51
245 246 0.396811 GATTAGGGGGTGTCCGGATG 59.603 60.000 7.81 0.00 36.01 3.51
246 247 0.767060 GGATTAGGGGGTGTCCGGAT 60.767 60.000 7.81 0.00 36.01 4.18
247 248 1.383525 GGATTAGGGGGTGTCCGGA 60.384 63.158 0.00 0.00 36.01 5.14
248 249 1.691337 TGGATTAGGGGGTGTCCGG 60.691 63.158 0.00 0.00 36.01 5.14
249 250 1.696097 CCTGGATTAGGGGGTGTCCG 61.696 65.000 0.00 0.00 43.33 4.79
250 251 2.231642 CCTGGATTAGGGGGTGTCC 58.768 63.158 0.00 0.00 43.33 4.02
258 259 2.324541 CTGAGGGAGTCCTGGATTAGG 58.675 57.143 9.58 0.00 45.05 2.69
259 260 1.691434 GCTGAGGGAGTCCTGGATTAG 59.309 57.143 9.58 0.93 45.05 1.73
260 261 1.794714 GCTGAGGGAGTCCTGGATTA 58.205 55.000 9.58 0.00 45.05 1.75
261 262 1.333636 CGCTGAGGGAGTCCTGGATT 61.334 60.000 9.58 0.00 45.05 3.01
262 263 1.760086 CGCTGAGGGAGTCCTGGAT 60.760 63.158 9.58 0.00 45.05 3.41
263 264 2.363018 CGCTGAGGGAGTCCTGGA 60.363 66.667 9.58 0.00 45.05 3.86
264 265 2.363018 TCGCTGAGGGAGTCCTGG 60.363 66.667 9.58 0.00 45.05 4.45
265 266 3.074999 GCTCGCTGAGGGAGTCCTG 62.075 68.421 24.62 3.61 45.05 3.86
267 268 2.430610 ATGCTCGCTGAGGGAGTCC 61.431 63.158 24.62 11.79 43.22 3.85
268 269 1.227205 CATGCTCGCTGAGGGAGTC 60.227 63.158 24.62 17.72 43.22 3.36
269 270 1.047596 ATCATGCTCGCTGAGGGAGT 61.048 55.000 24.62 6.15 43.22 3.85
270 271 0.600518 CATCATGCTCGCTGAGGGAG 60.601 60.000 20.77 20.77 43.96 4.30
271 272 1.044790 TCATCATGCTCGCTGAGGGA 61.045 55.000 0.00 0.00 0.00 4.20
272 273 0.879400 GTCATCATGCTCGCTGAGGG 60.879 60.000 7.50 0.00 0.00 4.30
273 274 0.879400 GGTCATCATGCTCGCTGAGG 60.879 60.000 7.50 0.00 0.00 3.86
274 275 1.213733 CGGTCATCATGCTCGCTGAG 61.214 60.000 1.80 1.80 0.00 3.35
275 276 1.227060 CGGTCATCATGCTCGCTGA 60.227 57.895 0.00 0.00 0.00 4.26
276 277 2.242572 CCGGTCATCATGCTCGCTG 61.243 63.158 0.00 0.00 0.00 5.18
277 278 2.107750 CCGGTCATCATGCTCGCT 59.892 61.111 0.00 0.00 0.00 4.93
278 279 2.969238 CCCGGTCATCATGCTCGC 60.969 66.667 0.00 0.00 0.00 5.03
279 280 2.280389 CCCCGGTCATCATGCTCG 60.280 66.667 0.00 0.00 0.00 5.03
280 281 1.524621 CACCCCGGTCATCATGCTC 60.525 63.158 0.00 0.00 0.00 4.26
281 282 2.591753 CACCCCGGTCATCATGCT 59.408 61.111 0.00 0.00 0.00 3.79
282 283 2.516930 CCACCCCGGTCATCATGC 60.517 66.667 0.00 0.00 0.00 4.06
283 284 1.146930 CTCCACCCCGGTCATCATG 59.853 63.158 0.00 0.00 35.57 3.07
284 285 0.400525 ATCTCCACCCCGGTCATCAT 60.401 55.000 0.00 0.00 35.57 2.45
285 286 1.002921 ATCTCCACCCCGGTCATCA 59.997 57.895 0.00 0.00 35.57 3.07
286 287 1.048724 TGATCTCCACCCCGGTCATC 61.049 60.000 0.00 0.00 35.57 2.92
287 288 0.400525 ATGATCTCCACCCCGGTCAT 60.401 55.000 0.00 0.00 35.57 3.06
288 289 1.002921 ATGATCTCCACCCCGGTCA 59.997 57.895 0.00 0.00 35.57 4.02
289 290 1.048724 TCATGATCTCCACCCCGGTC 61.049 60.000 0.00 0.00 35.57 4.79
290 291 0.620410 TTCATGATCTCCACCCCGGT 60.620 55.000 0.00 0.00 35.57 5.28
291 292 0.107456 CTTCATGATCTCCACCCCGG 59.893 60.000 0.00 0.00 0.00 5.73
292 293 0.107456 CCTTCATGATCTCCACCCCG 59.893 60.000 0.00 0.00 0.00 5.73
293 294 1.133976 CACCTTCATGATCTCCACCCC 60.134 57.143 0.00 0.00 0.00 4.95
294 295 1.133976 CCACCTTCATGATCTCCACCC 60.134 57.143 0.00 0.00 0.00 4.61
295 296 1.839994 TCCACCTTCATGATCTCCACC 59.160 52.381 0.00 0.00 0.00 4.61
296 297 3.390639 AGATCCACCTTCATGATCTCCAC 59.609 47.826 0.00 0.00 40.88 4.02
297 298 3.662078 AGATCCACCTTCATGATCTCCA 58.338 45.455 0.00 0.00 40.88 3.86
300 301 5.908562 ATTGAGATCCACCTTCATGATCT 57.091 39.130 0.00 1.12 45.91 2.75
301 302 5.936956 GGTATTGAGATCCACCTTCATGATC 59.063 44.000 0.00 0.00 36.08 2.92
302 303 5.512060 CGGTATTGAGATCCACCTTCATGAT 60.512 44.000 0.00 0.00 0.00 2.45
303 304 4.202253 CGGTATTGAGATCCACCTTCATGA 60.202 45.833 0.00 0.00 0.00 3.07
304 305 4.060900 CGGTATTGAGATCCACCTTCATG 58.939 47.826 0.00 0.00 0.00 3.07
305 306 3.711704 ACGGTATTGAGATCCACCTTCAT 59.288 43.478 0.00 0.00 0.00 2.57
306 307 3.104512 ACGGTATTGAGATCCACCTTCA 58.895 45.455 0.00 0.00 0.00 3.02
307 308 3.118738 ACACGGTATTGAGATCCACCTTC 60.119 47.826 0.00 0.00 0.00 3.46
308 309 2.838202 ACACGGTATTGAGATCCACCTT 59.162 45.455 0.00 0.00 0.00 3.50
309 310 2.431057 GACACGGTATTGAGATCCACCT 59.569 50.000 0.00 0.00 0.00 4.00
310 311 2.798499 CGACACGGTATTGAGATCCACC 60.798 54.545 0.00 0.00 0.00 4.61
311 312 2.460918 CGACACGGTATTGAGATCCAC 58.539 52.381 0.00 0.00 0.00 4.02
312 313 1.202371 GCGACACGGTATTGAGATCCA 60.202 52.381 0.00 0.00 0.00 3.41
313 314 1.488527 GCGACACGGTATTGAGATCC 58.511 55.000 0.00 0.00 0.00 3.36
314 315 1.202371 TGGCGACACGGTATTGAGATC 60.202 52.381 0.00 0.00 33.40 2.75
315 316 0.821517 TGGCGACACGGTATTGAGAT 59.178 50.000 0.00 0.00 33.40 2.75
316 317 0.604073 TTGGCGACACGGTATTGAGA 59.396 50.000 0.00 0.00 42.67 3.27
317 318 0.999406 CTTGGCGACACGGTATTGAG 59.001 55.000 0.00 0.00 42.67 3.02
318 319 0.390603 CCTTGGCGACACGGTATTGA 60.391 55.000 5.41 0.00 44.43 2.57
319 320 2.086510 CCTTGGCGACACGGTATTG 58.913 57.895 5.41 0.00 44.43 1.90
320 321 4.609995 CCTTGGCGACACGGTATT 57.390 55.556 5.41 0.00 44.43 1.89
325 326 1.738099 CCTCTTCCTTGGCGACACG 60.738 63.158 0.00 0.00 42.67 4.49
326 327 2.035442 GCCTCTTCCTTGGCGACAC 61.035 63.158 0.00 0.00 42.67 3.67
327 328 2.347490 GCCTCTTCCTTGGCGACA 59.653 61.111 0.00 0.00 39.71 4.35
332 333 2.045926 CCACGGCCTCTTCCTTGG 60.046 66.667 0.00 0.00 38.88 3.61
333 334 0.955919 GAACCACGGCCTCTTCCTTG 60.956 60.000 0.00 0.00 0.00 3.61
334 335 1.128188 AGAACCACGGCCTCTTCCTT 61.128 55.000 0.00 0.00 0.00 3.36
335 336 0.252103 TAGAACCACGGCCTCTTCCT 60.252 55.000 0.00 0.00 0.00 3.36
336 337 0.175989 CTAGAACCACGGCCTCTTCC 59.824 60.000 0.00 0.00 0.00 3.46
337 338 1.183549 TCTAGAACCACGGCCTCTTC 58.816 55.000 0.00 0.00 0.00 2.87
338 339 1.550976 CTTCTAGAACCACGGCCTCTT 59.449 52.381 0.00 0.00 0.00 2.85
339 340 1.187087 CTTCTAGAACCACGGCCTCT 58.813 55.000 0.00 0.00 0.00 3.69
340 341 0.896226 ACTTCTAGAACCACGGCCTC 59.104 55.000 0.00 0.00 0.00 4.70
341 342 1.002087 CAACTTCTAGAACCACGGCCT 59.998 52.381 0.00 0.00 0.00 5.19
342 343 1.439679 CAACTTCTAGAACCACGGCC 58.560 55.000 0.00 0.00 0.00 6.13
343 344 0.796927 GCAACTTCTAGAACCACGGC 59.203 55.000 0.00 0.00 0.00 5.68
344 345 2.069273 CTGCAACTTCTAGAACCACGG 58.931 52.381 0.00 0.00 0.00 4.94
345 346 2.069273 CCTGCAACTTCTAGAACCACG 58.931 52.381 0.00 0.00 0.00 4.94
346 347 1.807142 GCCTGCAACTTCTAGAACCAC 59.193 52.381 0.00 0.00 0.00 4.16
347 348 1.271379 GGCCTGCAACTTCTAGAACCA 60.271 52.381 0.00 0.00 0.00 3.67
348 349 1.271379 TGGCCTGCAACTTCTAGAACC 60.271 52.381 3.32 0.00 0.00 3.62
349 350 2.185004 TGGCCTGCAACTTCTAGAAC 57.815 50.000 3.32 0.00 0.00 3.01
350 351 2.158682 TGTTGGCCTGCAACTTCTAGAA 60.159 45.455 3.32 4.81 33.97 2.10
351 352 1.419762 TGTTGGCCTGCAACTTCTAGA 59.580 47.619 3.32 0.00 33.97 2.43
352 353 1.896220 TGTTGGCCTGCAACTTCTAG 58.104 50.000 3.32 0.00 33.97 2.43
353 354 2.161855 CATGTTGGCCTGCAACTTCTA 58.838 47.619 3.32 0.00 33.97 2.10
354 355 0.963962 CATGTTGGCCTGCAACTTCT 59.036 50.000 3.32 0.00 33.97 2.85
355 356 0.668401 GCATGTTGGCCTGCAACTTC 60.668 55.000 9.69 0.00 36.47 3.01
356 357 1.117142 AGCATGTTGGCCTGCAACTT 61.117 50.000 16.24 2.60 38.47 2.66
357 358 1.530013 GAGCATGTTGGCCTGCAACT 61.530 55.000 16.24 10.55 38.47 3.16
358 359 1.080298 GAGCATGTTGGCCTGCAAC 60.080 57.895 16.24 7.43 38.47 4.17
359 360 1.114119 TTGAGCATGTTGGCCTGCAA 61.114 50.000 16.24 2.21 38.47 4.08
360 361 1.529152 CTTGAGCATGTTGGCCTGCA 61.529 55.000 16.24 9.61 38.47 4.41
361 362 1.214589 CTTGAGCATGTTGGCCTGC 59.785 57.895 3.32 5.23 36.66 4.85
362 363 0.963962 AACTTGAGCATGTTGGCCTG 59.036 50.000 3.32 0.00 0.00 4.85
363 364 1.251251 GAACTTGAGCATGTTGGCCT 58.749 50.000 3.32 0.00 0.00 5.19
364 365 0.961019 TGAACTTGAGCATGTTGGCC 59.039 50.000 0.00 0.00 0.00 5.36
365 366 1.336240 GGTGAACTTGAGCATGTTGGC 60.336 52.381 6.49 0.00 0.00 4.52
366 367 1.069022 CGGTGAACTTGAGCATGTTGG 60.069 52.381 6.49 0.00 0.00 3.77
367 368 1.872952 TCGGTGAACTTGAGCATGTTG 59.127 47.619 6.49 0.00 0.00 3.33
368 369 1.873591 GTCGGTGAACTTGAGCATGTT 59.126 47.619 0.00 1.91 0.00 2.71
369 370 1.512926 GTCGGTGAACTTGAGCATGT 58.487 50.000 0.00 0.00 0.00 3.21
370 371 0.439985 CGTCGGTGAACTTGAGCATG 59.560 55.000 0.00 0.00 0.00 4.06
371 372 0.317160 TCGTCGGTGAACTTGAGCAT 59.683 50.000 0.00 0.00 0.00 3.79
372 373 0.318699 CTCGTCGGTGAACTTGAGCA 60.319 55.000 0.00 0.00 0.00 4.26
373 374 0.318784 ACTCGTCGGTGAACTTGAGC 60.319 55.000 0.00 0.00 0.00 4.26
374 375 1.001706 TCACTCGTCGGTGAACTTGAG 60.002 52.381 12.32 0.00 42.35 3.02
375 376 1.026584 TCACTCGTCGGTGAACTTGA 58.973 50.000 12.32 0.00 42.35 3.02
376 377 3.562639 TCACTCGTCGGTGAACTTG 57.437 52.632 12.32 0.00 42.35 3.16
377 378 2.095161 GAGATCACTCGTCGGTGAACTT 60.095 50.000 19.70 10.56 45.06 2.66
378 379 1.469308 GAGATCACTCGTCGGTGAACT 59.531 52.381 19.17 19.17 46.75 3.01
389 390 2.583593 GCGGCCACGAGATCACTC 60.584 66.667 2.24 0.00 44.60 3.51
390 391 4.498520 CGCGGCCACGAGATCACT 62.499 66.667 7.58 0.00 42.82 3.41
391 392 4.492160 TCGCGGCCACGAGATCAC 62.492 66.667 12.78 0.00 43.89 3.06
399 400 3.112709 GAAGTCACTCGCGGCCAC 61.113 66.667 6.13 0.00 0.00 5.01
400 401 4.373116 GGAAGTCACTCGCGGCCA 62.373 66.667 6.13 0.00 0.00 5.36
401 402 3.591254 AAGGAAGTCACTCGCGGCC 62.591 63.158 6.13 0.00 0.00 6.13
402 403 1.228657 AAAAGGAAGTCACTCGCGGC 61.229 55.000 6.13 0.00 0.00 6.53
403 404 1.226746 AAAAAGGAAGTCACTCGCGG 58.773 50.000 6.13 0.00 0.00 6.46
419 420 3.793801 GCACACAAGCCGACATACAAAAA 60.794 43.478 0.00 0.00 0.00 1.94
420 421 2.287308 GCACACAAGCCGACATACAAAA 60.287 45.455 0.00 0.00 0.00 2.44
421 422 1.265635 GCACACAAGCCGACATACAAA 59.734 47.619 0.00 0.00 0.00 2.83
422 423 0.871722 GCACACAAGCCGACATACAA 59.128 50.000 0.00 0.00 0.00 2.41
423 424 0.034756 AGCACACAAGCCGACATACA 59.965 50.000 0.00 0.00 34.23 2.29
424 425 0.443869 CAGCACACAAGCCGACATAC 59.556 55.000 0.00 0.00 34.23 2.39
425 426 0.673333 CCAGCACACAAGCCGACATA 60.673 55.000 0.00 0.00 34.23 2.29
426 427 1.968017 CCAGCACACAAGCCGACAT 60.968 57.895 0.00 0.00 34.23 3.06
427 428 2.591429 CCAGCACACAAGCCGACA 60.591 61.111 0.00 0.00 34.23 4.35
428 429 4.030452 GCCAGCACACAAGCCGAC 62.030 66.667 0.00 0.00 34.23 4.79
431 432 3.677648 CAGGCCAGCACACAAGCC 61.678 66.667 5.01 0.00 46.13 4.35
432 433 2.595463 TCAGGCCAGCACACAAGC 60.595 61.111 5.01 0.00 0.00 4.01
433 434 2.263741 GGTCAGGCCAGCACACAAG 61.264 63.158 5.01 0.00 37.17 3.16
434 435 2.203337 GGTCAGGCCAGCACACAA 60.203 61.111 5.01 0.00 37.17 3.33
435 436 3.487626 TGGTCAGGCCAGCACACA 61.488 61.111 5.01 0.00 43.61 3.72
460 461 1.812214 GAGTTCGATCACGCCATCGC 61.812 60.000 10.89 0.30 44.48 4.58
461 462 0.525455 TGAGTTCGATCACGCCATCG 60.525 55.000 9.72 9.72 45.91 3.84
462 463 1.590238 CTTGAGTTCGATCACGCCATC 59.410 52.381 0.00 0.00 39.58 3.51
463 464 1.066858 ACTTGAGTTCGATCACGCCAT 60.067 47.619 0.00 0.00 39.58 4.40
464 465 0.317160 ACTTGAGTTCGATCACGCCA 59.683 50.000 0.00 0.00 39.58 5.69
465 466 1.390463 GAACTTGAGTTCGATCACGCC 59.610 52.381 8.02 0.00 43.97 5.68
466 467 2.771210 GAACTTGAGTTCGATCACGC 57.229 50.000 8.02 0.00 43.97 5.34
490 491 3.849911 TGTTTGAATCGGCACACAAAAA 58.150 36.364 0.00 0.00 34.76 1.94
491 492 3.510388 TGTTTGAATCGGCACACAAAA 57.490 38.095 0.00 0.00 34.76 2.44
492 493 3.510388 TTGTTTGAATCGGCACACAAA 57.490 38.095 0.00 0.00 36.02 2.83
493 494 3.182967 GTTTGTTTGAATCGGCACACAA 58.817 40.909 0.00 0.00 36.86 3.33
494 495 2.164422 TGTTTGTTTGAATCGGCACACA 59.836 40.909 0.00 0.00 0.00 3.72
495 496 2.803451 TGTTTGTTTGAATCGGCACAC 58.197 42.857 0.00 0.00 0.00 3.82
496 497 3.510388 TTGTTTGTTTGAATCGGCACA 57.490 38.095 0.00 0.00 0.00 4.57
497 498 4.849111 TTTTGTTTGTTTGAATCGGCAC 57.151 36.364 0.00 0.00 0.00 5.01
516 517 6.383415 TGTAGAGCAACTTTTGTTCGTTTTT 58.617 32.000 0.00 0.00 44.40 1.94
517 518 5.945155 TGTAGAGCAACTTTTGTTCGTTTT 58.055 33.333 0.00 0.00 44.40 2.43
518 519 5.554822 TGTAGAGCAACTTTTGTTCGTTT 57.445 34.783 0.00 0.00 44.40 3.60
519 520 5.751243 ATGTAGAGCAACTTTTGTTCGTT 57.249 34.783 0.00 0.00 44.40 3.85
520 521 7.435068 AATATGTAGAGCAACTTTTGTTCGT 57.565 32.000 0.00 0.00 44.40 3.85
521 522 8.015087 TCAAATATGTAGAGCAACTTTTGTTCG 58.985 33.333 0.00 0.00 44.40 3.95
522 523 9.846248 ATCAAATATGTAGAGCAACTTTTGTTC 57.154 29.630 0.00 0.00 41.35 3.18
523 524 9.630098 CATCAAATATGTAGAGCAACTTTTGTT 57.370 29.630 0.00 0.00 44.66 2.83
524 525 8.796475 ACATCAAATATGTAGAGCAACTTTTGT 58.204 29.630 0.00 0.00 31.77 2.83
525 526 9.282247 GACATCAAATATGTAGAGCAACTTTTG 57.718 33.333 0.00 0.00 31.52 2.44
526 527 8.177663 CGACATCAAATATGTAGAGCAACTTTT 58.822 33.333 0.00 0.00 31.52 2.27
527 528 7.334421 ACGACATCAAATATGTAGAGCAACTTT 59.666 33.333 5.43 0.00 31.52 2.66
528 529 6.818644 ACGACATCAAATATGTAGAGCAACTT 59.181 34.615 5.43 0.00 31.52 2.66
529 530 6.341316 ACGACATCAAATATGTAGAGCAACT 58.659 36.000 5.43 0.00 31.52 3.16
530 531 6.589830 ACGACATCAAATATGTAGAGCAAC 57.410 37.500 5.43 0.00 31.52 4.17
531 532 6.257849 GGAACGACATCAAATATGTAGAGCAA 59.742 38.462 5.43 0.00 31.52 3.91
532 533 5.753438 GGAACGACATCAAATATGTAGAGCA 59.247 40.000 5.43 0.00 31.52 4.26
533 534 5.986135 AGGAACGACATCAAATATGTAGAGC 59.014 40.000 5.43 0.00 31.52 4.09
534 535 8.331022 CAAAGGAACGACATCAAATATGTAGAG 58.669 37.037 5.43 0.00 31.52 2.43
535 536 8.038351 TCAAAGGAACGACATCAAATATGTAGA 58.962 33.333 5.43 0.00 31.52 2.59
536 537 8.196802 TCAAAGGAACGACATCAAATATGTAG 57.803 34.615 0.00 0.00 31.52 2.74
537 538 8.611757 CATCAAAGGAACGACATCAAATATGTA 58.388 33.333 0.00 0.00 31.52 2.29
538 539 7.336679 TCATCAAAGGAACGACATCAAATATGT 59.663 33.333 0.00 0.00 34.52 2.29
539 540 7.696755 TCATCAAAGGAACGACATCAAATATG 58.303 34.615 0.00 0.00 0.00 1.78
540 541 7.864108 TCATCAAAGGAACGACATCAAATAT 57.136 32.000 0.00 0.00 0.00 1.28
541 542 7.526608 GTTCATCAAAGGAACGACATCAAATA 58.473 34.615 0.00 0.00 35.76 1.40
596 598 2.543031 GGTTTTCCTTGCAGTCCGTTTC 60.543 50.000 0.00 0.00 36.94 2.78
597 599 1.407618 GGTTTTCCTTGCAGTCCGTTT 59.592 47.619 0.00 0.00 36.94 3.60
676 680 3.547468 CGTTTACGGGTAGTAATCGGTTG 59.453 47.826 11.42 0.00 46.52 3.77
701 705 2.050077 GTTGCTTGCCAGTTCGCC 60.050 61.111 0.00 0.00 0.00 5.54
702 706 0.527385 TTTGTTGCTTGCCAGTTCGC 60.527 50.000 0.00 0.00 0.00 4.70
703 707 1.199624 GTTTGTTGCTTGCCAGTTCG 58.800 50.000 0.00 0.00 0.00 3.95
704 708 1.926510 GTGTTTGTTGCTTGCCAGTTC 59.073 47.619 0.00 0.00 0.00 3.01
764 768 2.358737 GCTGTGGGTGAGTTCGGG 60.359 66.667 0.00 0.00 0.00 5.14
914 922 1.064825 ATCGGGAGGTTGTTGGACTT 58.935 50.000 0.00 0.00 0.00 3.01
1404 1420 2.202623 GAGTAGGGCGCGTGTGAG 60.203 66.667 8.43 0.00 0.00 3.51
1481 1497 3.049674 CCACCATTGTCAGCGCGT 61.050 61.111 8.43 0.00 0.00 6.01
1482 1498 4.465512 GCCACCATTGTCAGCGCG 62.466 66.667 0.00 0.00 0.00 6.86
1683 1699 0.678048 GGAGGAGCAAGCCACGAAAT 60.678 55.000 0.00 0.00 0.00 2.17
1716 1732 1.888512 CCAACAACCATGAGTTCCCAG 59.111 52.381 0.00 0.00 36.18 4.45
2035 2051 3.386726 CCATTGGATCCATTTGCTGATGT 59.613 43.478 17.06 0.00 0.00 3.06
2071 2087 7.664082 TGATTGCAAGTTTTTCAAGTTTGAA 57.336 28.000 4.94 3.28 44.78 2.69
2256 2272 2.231716 TGGACTCCTCAATTCTCGGA 57.768 50.000 0.00 0.00 0.00 4.55
2320 2336 1.868498 CGCAAGGAAGTTGGTCGTTAA 59.132 47.619 0.00 0.00 36.56 2.01
2394 2410 4.331968 GTGGAAGTAATGGTGGATCAACA 58.668 43.478 1.86 0.00 34.75 3.33
2515 2531 0.978151 TGGTTCTGGCTTACGGCTTA 59.022 50.000 0.00 0.00 41.46 3.09
2516 2532 0.605589 GTGGTTCTGGCTTACGGCTT 60.606 55.000 0.00 0.00 41.46 4.35
2517 2533 1.003718 GTGGTTCTGGCTTACGGCT 60.004 57.895 0.00 0.00 41.46 5.52
2518 2534 0.676782 ATGTGGTTCTGGCTTACGGC 60.677 55.000 0.00 0.00 40.90 5.68
2519 2535 1.821216 AATGTGGTTCTGGCTTACGG 58.179 50.000 0.00 0.00 0.00 4.02
2520 2536 5.560966 AATAAATGTGGTTCTGGCTTACG 57.439 39.130 0.00 0.00 0.00 3.18
2521 2537 6.099341 CCAAATAAATGTGGTTCTGGCTTAC 58.901 40.000 0.00 0.00 0.00 2.34
2611 2628 6.563222 AAATCATTGGTGAAGCAAAAATGG 57.437 33.333 0.00 0.00 38.01 3.16
2633 2650 7.386059 GGCCTTCCAAGAATTTTCTGATAAAA 58.614 34.615 0.00 0.00 37.65 1.52
2712 2729 3.495100 CGAGCTTGCCTCCATAACCTTAT 60.495 47.826 0.00 0.00 37.27 1.73
2750 2767 8.150296 TCAGACATCTTTGACATTAACTTCTCA 58.850 33.333 0.00 0.00 0.00 3.27
2959 2978 6.593382 GTGAGTTGTTCATGAGCTTATCTTCT 59.407 38.462 11.09 0.00 38.29 2.85
3079 3109 0.250727 TTTCGTGCTGGCCTAAAGCT 60.251 50.000 14.14 0.00 43.05 3.74
3121 3153 2.579410 ACTTCCTTTATGTGCCCGTT 57.421 45.000 0.00 0.00 0.00 4.44
3199 3231 7.777095 ACCTCTTCTTGCATAGAACTACTTAG 58.223 38.462 7.09 0.00 37.96 2.18
3203 3235 6.215495 AGACCTCTTCTTGCATAGAACTAC 57.785 41.667 7.09 0.92 37.96 2.73
3204 3236 7.231722 GGATAGACCTCTTCTTGCATAGAACTA 59.768 40.741 7.09 7.39 35.40 2.24
3205 3237 6.041523 GGATAGACCTCTTCTTGCATAGAACT 59.958 42.308 7.09 5.92 35.40 3.01
3206 3238 6.220201 GGATAGACCTCTTCTTGCATAGAAC 58.780 44.000 7.09 0.16 35.40 3.01
3207 3239 5.010112 CGGATAGACCTCTTCTTGCATAGAA 59.990 44.000 9.84 9.84 37.22 2.10
3209 3241 4.279671 ACGGATAGACCTCTTCTTGCATAG 59.720 45.833 0.00 0.00 35.55 2.23
3210 3242 4.215908 ACGGATAGACCTCTTCTTGCATA 58.784 43.478 0.00 0.00 35.55 3.14
3211 3243 3.034635 ACGGATAGACCTCTTCTTGCAT 58.965 45.455 0.00 0.00 35.55 3.96
3234 3270 1.153469 GCAGGCTGCTAGTGTCCTC 60.153 63.158 31.37 0.00 40.96 3.71
3266 3302 7.727331 ACTCAAACTCTCTTTTCAATCTCTG 57.273 36.000 0.00 0.00 0.00 3.35
3273 3309 9.010029 ACTAAACAAACTCAAACTCTCTTTTCA 57.990 29.630 0.00 0.00 0.00 2.69
3354 3390 5.924356 TGAGACCATGACTAAACAAACTGA 58.076 37.500 0.00 0.00 0.00 3.41
3467 3503 3.133003 GCAGTGAGGTTCTGAGGCTATTA 59.867 47.826 0.00 0.00 35.20 0.98
3491 3527 2.748350 GGGCCTAATCCCTACCGC 59.252 66.667 0.84 0.00 43.13 5.68
3537 3574 1.327690 CGGGGGACAAAGATCGAGGA 61.328 60.000 0.00 0.00 0.00 3.71
3553 3699 0.105349 TGGTAGGATAAGGGTCCGGG 60.105 60.000 0.00 0.00 43.27 5.73
3554 3700 1.797320 TTGGTAGGATAAGGGTCCGG 58.203 55.000 0.00 0.00 43.27 5.14
3598 3744 4.098044 CCAATAGGATATATGACCGCGAGT 59.902 45.833 8.23 3.14 36.89 4.18
3601 3747 4.386867 ACCAATAGGATATATGACCGCG 57.613 45.455 0.00 0.00 38.69 6.46
3938 4103 9.502091 GCATGAAGTATTAAGGGTGTATATTCA 57.498 33.333 0.00 0.00 0.00 2.57
3939 4104 9.502091 TGCATGAAGTATTAAGGGTGTATATTC 57.498 33.333 0.00 0.00 0.00 1.75
3940 4105 9.860650 TTGCATGAAGTATTAAGGGTGTATATT 57.139 29.630 0.00 0.00 0.00 1.28
3943 4108 9.284968 GTATTGCATGAAGTATTAAGGGTGTAT 57.715 33.333 0.00 0.00 0.00 2.29
3944 4109 8.268605 TGTATTGCATGAAGTATTAAGGGTGTA 58.731 33.333 0.00 0.00 0.00 2.90
3945 4110 7.116075 TGTATTGCATGAAGTATTAAGGGTGT 58.884 34.615 0.00 0.00 0.00 4.16
4001 4166 7.047891 CAGATTGGTGTGCTATAAAGTAGGAA 58.952 38.462 0.00 0.00 0.00 3.36
4011 4176 6.985653 ATAGAGTACAGATTGGTGTGCTAT 57.014 37.500 0.00 0.00 42.69 2.97
4150 4317 9.800433 TCGTTCAACTAAAACCGTATTCATATA 57.200 29.630 0.00 0.00 0.00 0.86
4278 4445 3.939740 ATCCCAGTGCAGTCATGTTAT 57.060 42.857 0.00 0.00 0.00 1.89
4337 4504 0.458669 CCAGTGCCGTTACTACCGAT 59.541 55.000 0.00 0.00 0.00 4.18
4398 4776 3.585428 TCCGTTGGGGGTTGCCAT 61.585 61.111 0.00 0.00 36.01 4.40
4399 4777 4.589675 GTCCGTTGGGGGTTGCCA 62.590 66.667 0.00 0.00 36.01 4.92
4403 4781 3.944945 GGACGTCCGTTGGGGGTT 61.945 66.667 20.85 0.00 36.01 4.11
4445 4824 1.433053 CGTGTCTGTTTTGCCGACCA 61.433 55.000 0.00 0.00 0.00 4.02
4458 4837 3.324099 CTAGCGGACGTGCGTGTCT 62.324 63.158 29.81 20.35 40.67 3.41
4714 5115 3.836176 GACGACCACGACGGCAACT 62.836 63.158 0.00 0.00 42.66 3.16
4715 5116 3.400590 GACGACCACGACGGCAAC 61.401 66.667 0.00 0.00 42.66 4.17
4730 5139 2.022129 CCTCACGTGCGACAAGGAC 61.022 63.158 11.67 0.00 37.88 3.85
4741 5150 1.664321 GCCCTACATCGACCTCACGT 61.664 60.000 0.00 0.00 34.70 4.49
4877 5308 1.153168 GTACATGTCCATGCCGCCT 60.153 57.895 0.00 0.00 42.39 5.52
4923 5356 3.449227 CGGCCAGTCCTGCTCGTA 61.449 66.667 2.24 0.00 0.00 3.43
4955 5388 3.371097 GAAGGAGCCCGCGACATGA 62.371 63.158 8.23 0.00 0.00 3.07
4972 5411 2.293318 ATGCAGAAGGAGGTGCCGA 61.293 57.895 0.00 0.00 43.43 5.54
5073 5518 2.911143 CCAATGGGAGGACCTCGG 59.089 66.667 15.46 6.69 41.11 4.63
5492 5940 0.179056 CACTCTGGGACACGTGGTTT 60.179 55.000 21.57 0.00 32.96 3.27
5536 5984 2.651361 CAGCCGACCTCGTCAACT 59.349 61.111 0.00 0.00 37.74 3.16
5563 6011 1.154188 GAGATCTATCGCCGTCGCC 60.154 63.158 0.00 0.00 35.26 5.54
5755 6203 1.228367 GCATTCGCCATCTCCCCAT 60.228 57.895 0.00 0.00 0.00 4.00
5766 6214 1.817099 CACCTCCTCCAGCATTCGC 60.817 63.158 0.00 0.00 38.99 4.70
5839 6299 4.329545 GCAGGGGGAAGCACGACA 62.330 66.667 0.00 0.00 0.00 4.35
6078 6577 4.487412 GTCGACCGCCCACCTACG 62.487 72.222 3.51 0.00 0.00 3.51
6243 6752 1.576421 CCCAAACAGACAGAAGCGC 59.424 57.895 0.00 0.00 0.00 5.92
6339 6848 9.857656 AAGGATATTATTGAAGTGTCACATCAT 57.142 29.630 11.44 5.37 31.90 2.45
6366 6875 5.044772 TGGTATCAAACAGCCCTAATTACCA 60.045 40.000 0.00 0.00 0.00 3.25
6402 6915 5.835819 CCTCCAGTCTATCAAATACAGGAGA 59.164 44.000 12.96 0.00 45.07 3.71
6403 6916 5.835819 TCCTCCAGTCTATCAAATACAGGAG 59.164 44.000 6.25 6.25 43.09 3.69
6435 6948 4.215399 TGGAAATCTTCAACCGTTCATGTC 59.785 41.667 0.00 0.00 0.00 3.06
6528 7042 2.755103 GGCCCCTCTTGTTGTAATGAAG 59.245 50.000 0.00 0.00 0.00 3.02
6577 7092 7.205992 TGCTGAAACATTTTAACATGCAACTA 58.794 30.769 1.43 0.00 0.00 2.24
6608 7123 6.973642 TGTCCAAGATATTTCCTTTGGATCT 58.026 36.000 7.93 0.00 0.00 2.75
6770 7291 1.072806 ACACTGAATGCTGCTTGGAGA 59.927 47.619 0.00 0.00 0.00 3.71
7009 7536 6.708054 AGACTTTGTGGATAAAAGTGAGTCAG 59.292 38.462 6.30 0.00 45.50 3.51
7468 8003 4.512571 TCATACATCAACATGAATGAGCCG 59.487 41.667 0.00 0.00 33.72 5.52
7516 8052 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
7517 8053 3.118038 CCATCTATTTTGGAACGGAGGGA 60.118 47.826 0.00 0.00 36.26 4.20
7518 8054 3.214328 CCATCTATTTTGGAACGGAGGG 58.786 50.000 0.00 0.00 36.26 4.30
7519 8055 2.618709 GCCATCTATTTTGGAACGGAGG 59.381 50.000 0.00 0.00 36.26 4.30
7520 8056 2.618709 GGCCATCTATTTTGGAACGGAG 59.381 50.000 0.00 0.00 36.26 4.63
7521 8057 2.650322 GGCCATCTATTTTGGAACGGA 58.350 47.619 0.00 0.00 36.26 4.69
7522 8058 1.681264 GGGCCATCTATTTTGGAACGG 59.319 52.381 4.39 0.00 36.26 4.44
7523 8059 2.374184 TGGGCCATCTATTTTGGAACG 58.626 47.619 0.00 0.00 36.26 3.95
7524 8060 3.769300 AGTTGGGCCATCTATTTTGGAAC 59.231 43.478 15.44 1.81 36.26 3.62
7525 8061 4.059773 AGTTGGGCCATCTATTTTGGAA 57.940 40.909 15.44 0.00 36.26 3.53
7526 8062 3.756082 AGTTGGGCCATCTATTTTGGA 57.244 42.857 15.44 0.00 36.26 3.53
7527 8063 4.824479 AAAGTTGGGCCATCTATTTTGG 57.176 40.909 17.19 0.00 37.31 3.28
7528 8064 8.237811 AGTATAAAGTTGGGCCATCTATTTTG 57.762 34.615 17.19 0.00 0.00 2.44
7529 8065 9.930158 TTAGTATAAAGTTGGGCCATCTATTTT 57.070 29.630 17.19 10.68 0.00 1.82
7530 8066 9.930158 TTTAGTATAAAGTTGGGCCATCTATTT 57.070 29.630 17.19 11.34 0.00 1.40
7531 8067 9.574516 CTTTAGTATAAAGTTGGGCCATCTATT 57.425 33.333 17.19 14.67 0.00 1.73
7532 8068 8.724310 ACTTTAGTATAAAGTTGGGCCATCTAT 58.276 33.333 17.19 10.66 37.18 1.98
7533 8069 8.097791 ACTTTAGTATAAAGTTGGGCCATCTA 57.902 34.615 17.19 3.60 37.18 1.98
7534 8070 6.970191 ACTTTAGTATAAAGTTGGGCCATCT 58.030 36.000 7.26 9.69 37.18 2.90
7535 8071 7.640597 AACTTTAGTATAAAGTTGGGCCATC 57.359 36.000 20.99 6.81 45.58 3.51
7536 8072 8.333984 ACTAACTTTAGTATAAAGTTGGGCCAT 58.666 33.333 27.50 13.90 46.38 4.40
7537 8073 7.692172 ACTAACTTTAGTATAAAGTTGGGCCA 58.308 34.615 27.50 0.00 46.38 5.36
7560 8096 9.408648 CCAAAATAGATGACCCAACTTTATACT 57.591 33.333 0.00 0.00 0.00 2.12
7561 8097 9.403583 TCCAAAATAGATGACCCAACTTTATAC 57.596 33.333 0.00 0.00 0.00 1.47
7562 8098 9.983024 TTCCAAAATAGATGACCCAACTTTATA 57.017 29.630 0.00 0.00 0.00 0.98
7563 8099 8.749354 GTTCCAAAATAGATGACCCAACTTTAT 58.251 33.333 0.00 0.00 0.00 1.40
7564 8100 7.094549 CGTTCCAAAATAGATGACCCAACTTTA 60.095 37.037 0.00 0.00 0.00 1.85
7565 8101 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
7566 8102 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
7567 8103 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
7568 8104 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
7569 8105 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
7570 8106 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
7571 8107 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
7572 8108 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
7573 8109 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
7574 8110 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
7575 8111 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
7576 8112 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
7577 8113 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
7578 8114 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
7579 8115 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
7580 8116 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
7581 8117 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
7582 8118 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
7583 8119 2.309755 TCTACTACTCCCTCCGTTCCAA 59.690 50.000 0.00 0.00 0.00 3.53
7584 8120 1.918262 TCTACTACTCCCTCCGTTCCA 59.082 52.381 0.00 0.00 0.00 3.53
7585 8121 2.725221 TCTACTACTCCCTCCGTTCC 57.275 55.000 0.00 0.00 0.00 3.62
7586 8122 3.181488 GCTTTCTACTACTCCCTCCGTTC 60.181 52.174 0.00 0.00 0.00 3.95
7587 8123 2.759535 GCTTTCTACTACTCCCTCCGTT 59.240 50.000 0.00 0.00 0.00 4.44
7588 8124 2.291411 TGCTTTCTACTACTCCCTCCGT 60.291 50.000 0.00 0.00 0.00 4.69
7589 8125 2.376109 TGCTTTCTACTACTCCCTCCG 58.624 52.381 0.00 0.00 0.00 4.63
7590 8126 4.406003 TCATTGCTTTCTACTACTCCCTCC 59.594 45.833 0.00 0.00 0.00 4.30
7591 8127 5.599999 TCATTGCTTTCTACTACTCCCTC 57.400 43.478 0.00 0.00 0.00 4.30
7592 8128 5.686124 GCATCATTGCTTTCTACTACTCCCT 60.686 44.000 0.00 0.00 45.77 4.20
7593 8129 4.513318 GCATCATTGCTTTCTACTACTCCC 59.487 45.833 0.00 0.00 45.77 4.30
7594 8130 5.665381 GCATCATTGCTTTCTACTACTCC 57.335 43.478 0.00 0.00 45.77 3.85
7656 8192 2.951475 ATTGGCAACGTGTGGTCGGT 62.951 55.000 0.00 0.00 42.51 4.69
7818 8354 4.806247 AGGCTTCGTAGAAAATCTTCATCG 59.194 41.667 0.00 0.00 45.90 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.