Multiple sequence alignment - TraesCS4A01G085900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G085900 chr4A 100.000 3527 0 0 1 3527 90407469 90403943 0.000000e+00 6514
1 TraesCS4A01G085900 chr4A 97.082 891 24 2 2637 3527 716468041 716468929 0.000000e+00 1500
2 TraesCS4A01G085900 chr4A 91.813 171 13 1 1228 1398 145649173 145649004 1.640000e-58 237
3 TraesCS4A01G085900 chrUn 94.592 1276 38 11 1381 2638 60174422 60175684 0.000000e+00 1945
4 TraesCS4A01G085900 chrUn 94.592 1276 38 11 1381 2638 233393891 233395153 0.000000e+00 1945
5 TraesCS4A01G085900 chrUn 93.925 642 26 4 591 1226 60173774 60174408 0.000000e+00 957
6 TraesCS4A01G085900 chrUn 93.925 642 26 4 591 1226 233393243 233393877 0.000000e+00 957
7 TraesCS4A01G085900 chr4D 94.963 1231 38 7 1381 2587 374101240 374102470 0.000000e+00 1908
8 TraesCS4A01G085900 chr4D 97.643 891 21 0 2637 3527 40416585 40415695 0.000000e+00 1530
9 TraesCS4A01G085900 chr4D 93.597 734 23 10 513 1229 374100510 374101236 0.000000e+00 1074
10 TraesCS4A01G085900 chr4D 97.005 434 13 0 2637 3070 40424573 40424140 0.000000e+00 730
11 TraesCS4A01G085900 chr4D 94.203 69 3 1 5 72 365503625 365503693 1.730000e-18 104
12 TraesCS4A01G085900 chr7A 98.316 891 15 0 2637 3527 91406628 91407518 0.000000e+00 1563
13 TraesCS4A01G085900 chr7A 97.980 891 18 0 2637 3527 112120162 112119272 0.000000e+00 1546
14 TraesCS4A01G085900 chr7A 97.531 891 22 0 2637 3527 620742934 620743824 0.000000e+00 1524
15 TraesCS4A01G085900 chr7A 95.822 383 12 3 97 476 469362460 469362079 1.800000e-172 616
16 TraesCS4A01G085900 chr7A 91.813 171 13 1 1228 1398 6443622 6443453 1.640000e-58 237
17 TraesCS4A01G085900 chr7A 92.262 168 11 2 1228 1395 200852191 200852356 1.640000e-58 237
18 TraesCS4A01G085900 chr2A 98.094 892 15 2 2637 3527 27479968 27480858 0.000000e+00 1552
19 TraesCS4A01G085900 chr2A 95.297 404 14 5 87 486 456291340 456290938 1.380000e-178 636
20 TraesCS4A01G085900 chr2A 96.354 384 10 2 97 478 459962474 459962093 2.310000e-176 628
21 TraesCS4A01G085900 chr2A 95.325 385 17 1 93 476 384697748 384698132 8.370000e-171 610
22 TraesCS4A01G085900 chr2A 92.398 171 12 1 1228 1398 268757738 268757569 3.520000e-60 243
23 TraesCS4A01G085900 chr2A 92.857 168 11 1 1228 1395 470120177 470120343 3.520000e-60 243
24 TraesCS4A01G085900 chr3D 97.980 891 18 0 2637 3527 41715789 41716679 0.000000e+00 1546
25 TraesCS4A01G085900 chr3D 100.000 68 0 0 1 68 24551519 24551452 3.700000e-25 126
26 TraesCS4A01G085900 chr3A 97.755 891 20 0 2637 3527 577244892 577245782 0.000000e+00 1535
27 TraesCS4A01G085900 chr3A 92.398 171 12 1 1228 1398 166842206 166842037 3.520000e-60 243
28 TraesCS4A01G085900 chr7B 97.643 891 20 1 2637 3527 523628249 523629138 0.000000e+00 1528
29 TraesCS4A01G085900 chr7B 97.188 889 25 0 2639 3527 686008576 686009464 0.000000e+00 1504
30 TraesCS4A01G085900 chr7B 100.000 70 0 0 1 70 64157925 64157856 2.860000e-26 130
31 TraesCS4A01G085900 chr3B 97.531 891 22 0 2637 3527 16084309 16085199 0.000000e+00 1524
32 TraesCS4A01G085900 chr2D 96.970 891 21 1 2637 3527 26863445 26862561 0.000000e+00 1491
33 TraesCS4A01G085900 chr1D 95.286 891 41 1 2637 3527 69858751 69859640 0.000000e+00 1411
34 TraesCS4A01G085900 chr1D 93.151 73 5 0 5 77 484831972 484831900 1.340000e-19 108
35 TraesCS4A01G085900 chr4B 96.054 735 28 1 2637 3371 545189490 545190223 0.000000e+00 1195
36 TraesCS4A01G085900 chr4B 91.361 382 30 2 96 476 125700825 125700446 1.450000e-143 520
37 TraesCS4A01G085900 chr4B 95.652 161 7 0 3367 3527 545204066 545204226 3.490000e-65 259
38 TraesCS4A01G085900 chr1A 91.379 638 34 6 2637 3254 128067559 128068195 0.000000e+00 854
39 TraesCS4A01G085900 chr1A 93.966 232 14 0 3296 3527 128068192 128068423 5.600000e-93 351
40 TraesCS4A01G085900 chr5A 96.899 387 11 1 93 478 651757015 651757401 0.000000e+00 647
41 TraesCS4A01G085900 chr5A 96.382 387 14 0 90 476 19912446 19912832 3.840000e-179 638
42 TraesCS4A01G085900 chr5A 92.262 168 12 1 1228 1395 84025847 84026013 1.640000e-58 237
43 TraesCS4A01G085900 chr5A 92.262 168 12 1 1228 1395 672696186 672696352 1.640000e-58 237
44 TraesCS4A01G085900 chr6A 90.979 388 23 5 97 476 139895759 139895376 2.430000e-141 512
45 TraesCS4A01G085900 chr7D 89.673 397 35 6 88 480 617060387 617060781 5.260000e-138 501
46 TraesCS4A01G085900 chr5B 92.262 168 12 1 1228 1395 61627016 61627182 1.640000e-58 237
47 TraesCS4A01G085900 chr5B 98.507 67 1 0 1 67 216398624 216398690 6.180000e-23 119
48 TraesCS4A01G085900 chr1B 98.551 69 1 0 1 69 134433277 134433209 4.780000e-24 122
49 TraesCS4A01G085900 chr1B 97.015 67 2 0 1 67 548631678 548631744 2.880000e-21 113
50 TraesCS4A01G085900 chr5D 98.507 67 1 0 1 67 377412472 377412406 6.180000e-23 119
51 TraesCS4A01G085900 chr5D 95.652 69 3 0 1 69 344704228 344704296 1.030000e-20 111


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G085900 chr4A 90403943 90407469 3526 True 6514.0 6514 100.0000 1 3527 1 chr4A.!!$R1 3526
1 TraesCS4A01G085900 chr4A 716468041 716468929 888 False 1500.0 1500 97.0820 2637 3527 1 chr4A.!!$F1 890
2 TraesCS4A01G085900 chrUn 60173774 60175684 1910 False 1451.0 1945 94.2585 591 2638 2 chrUn.!!$F1 2047
3 TraesCS4A01G085900 chrUn 233393243 233395153 1910 False 1451.0 1945 94.2585 591 2638 2 chrUn.!!$F2 2047
4 TraesCS4A01G085900 chr4D 40415695 40416585 890 True 1530.0 1530 97.6430 2637 3527 1 chr4D.!!$R1 890
5 TraesCS4A01G085900 chr4D 374100510 374102470 1960 False 1491.0 1908 94.2800 513 2587 2 chr4D.!!$F2 2074
6 TraesCS4A01G085900 chr7A 91406628 91407518 890 False 1563.0 1563 98.3160 2637 3527 1 chr7A.!!$F1 890
7 TraesCS4A01G085900 chr7A 112119272 112120162 890 True 1546.0 1546 97.9800 2637 3527 1 chr7A.!!$R2 890
8 TraesCS4A01G085900 chr7A 620742934 620743824 890 False 1524.0 1524 97.5310 2637 3527 1 chr7A.!!$F3 890
9 TraesCS4A01G085900 chr2A 27479968 27480858 890 False 1552.0 1552 98.0940 2637 3527 1 chr2A.!!$F1 890
10 TraesCS4A01G085900 chr3D 41715789 41716679 890 False 1546.0 1546 97.9800 2637 3527 1 chr3D.!!$F1 890
11 TraesCS4A01G085900 chr3A 577244892 577245782 890 False 1535.0 1535 97.7550 2637 3527 1 chr3A.!!$F1 890
12 TraesCS4A01G085900 chr7B 523628249 523629138 889 False 1528.0 1528 97.6430 2637 3527 1 chr7B.!!$F1 890
13 TraesCS4A01G085900 chr7B 686008576 686009464 888 False 1504.0 1504 97.1880 2639 3527 1 chr7B.!!$F2 888
14 TraesCS4A01G085900 chr3B 16084309 16085199 890 False 1524.0 1524 97.5310 2637 3527 1 chr3B.!!$F1 890
15 TraesCS4A01G085900 chr2D 26862561 26863445 884 True 1491.0 1491 96.9700 2637 3527 1 chr2D.!!$R1 890
16 TraesCS4A01G085900 chr1D 69858751 69859640 889 False 1411.0 1411 95.2860 2637 3527 1 chr1D.!!$F1 890
17 TraesCS4A01G085900 chr4B 545189490 545190223 733 False 1195.0 1195 96.0540 2637 3371 1 chr4B.!!$F1 734
18 TraesCS4A01G085900 chr1A 128067559 128068423 864 False 602.5 854 92.6725 2637 3527 2 chr1A.!!$F1 890

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
131 132 0.030101 CACGTTGTTGCGGGAACATT 59.970 50.0 15.88 1.25 44.23 2.71 F
1232 1250 0.034767 ATCATGCAGACACCCAGTGG 60.035 55.0 0.63 0.63 37.94 4.00 F
1657 1696 0.029700 CACACCCGTATGCATGCATG 59.970 55.0 37.43 25.54 37.82 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1327 1345 0.033109 GCCCCAGGCCTAGAAACAAT 60.033 55.0 3.98 0.0 44.06 2.71 R
2197 2237 0.106894 GGCTGCATGAGTAGGTACCC 59.893 60.0 8.74 0.0 0.00 3.69 R
2794 2837 0.246635 AAGGTCAACGTCTCCCATCG 59.753 55.0 0.00 0.0 0.00 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.776376 CACACTTCAAAATTAAGGGCAAATAT 57.224 30.769 0.00 0.00 30.06 1.28
26 27 8.658609 CACACTTCAAAATTAAGGGCAAATATG 58.341 33.333 0.00 0.00 30.06 1.78
27 28 8.592809 ACACTTCAAAATTAAGGGCAAATATGA 58.407 29.630 0.00 0.00 30.06 2.15
28 29 9.090692 CACTTCAAAATTAAGGGCAAATATGAG 57.909 33.333 0.00 0.00 0.00 2.90
29 30 8.815912 ACTTCAAAATTAAGGGCAAATATGAGT 58.184 29.630 0.00 0.00 0.00 3.41
32 33 9.474313 TCAAAATTAAGGGCAAATATGAGTAGT 57.526 29.630 0.00 0.00 0.00 2.73
33 34 9.520204 CAAAATTAAGGGCAAATATGAGTAGTG 57.480 33.333 0.00 0.00 0.00 2.74
34 35 7.823745 AATTAAGGGCAAATATGAGTAGTGG 57.176 36.000 0.00 0.00 0.00 4.00
35 36 3.864789 AGGGCAAATATGAGTAGTGGG 57.135 47.619 0.00 0.00 0.00 4.61
36 37 3.123273 AGGGCAAATATGAGTAGTGGGT 58.877 45.455 0.00 0.00 0.00 4.51
37 38 3.527665 AGGGCAAATATGAGTAGTGGGTT 59.472 43.478 0.00 0.00 0.00 4.11
38 39 3.883489 GGGCAAATATGAGTAGTGGGTTC 59.117 47.826 0.00 0.00 0.00 3.62
39 40 3.883489 GGCAAATATGAGTAGTGGGTTCC 59.117 47.826 0.00 0.00 0.00 3.62
40 41 4.523083 GCAAATATGAGTAGTGGGTTCCA 58.477 43.478 0.00 0.00 0.00 3.53
41 42 4.576463 GCAAATATGAGTAGTGGGTTCCAG 59.424 45.833 0.00 0.00 32.34 3.86
42 43 5.745227 CAAATATGAGTAGTGGGTTCCAGT 58.255 41.667 0.00 0.00 40.67 4.00
43 44 6.180472 CAAATATGAGTAGTGGGTTCCAGTT 58.820 40.000 0.00 0.00 38.30 3.16
44 45 7.335627 CAAATATGAGTAGTGGGTTCCAGTTA 58.664 38.462 0.00 0.00 38.30 2.24
45 46 6.732896 ATATGAGTAGTGGGTTCCAGTTAG 57.267 41.667 0.00 0.00 38.30 2.34
46 47 3.170717 TGAGTAGTGGGTTCCAGTTAGG 58.829 50.000 0.00 0.00 38.30 2.69
47 48 2.500504 GAGTAGTGGGTTCCAGTTAGGG 59.499 54.545 0.00 0.00 38.30 3.53
48 49 2.113052 AGTAGTGGGTTCCAGTTAGGGA 59.887 50.000 0.00 0.00 38.30 4.20
49 50 1.359168 AGTGGGTTCCAGTTAGGGAC 58.641 55.000 0.00 0.00 46.19 4.46
55 56 3.983044 GTTCCAGTTAGGGACACAGAT 57.017 47.619 0.00 0.00 46.18 2.90
56 57 3.600388 GTTCCAGTTAGGGACACAGATG 58.400 50.000 0.00 0.00 46.18 2.90
57 58 2.902608 TCCAGTTAGGGACACAGATGT 58.097 47.619 0.00 0.00 37.81 3.06
58 59 4.055710 TCCAGTTAGGGACACAGATGTA 57.944 45.455 0.00 0.00 35.92 2.29
59 60 4.422057 TCCAGTTAGGGACACAGATGTAA 58.578 43.478 0.00 0.00 35.92 2.41
60 61 4.841813 TCCAGTTAGGGACACAGATGTAAA 59.158 41.667 0.00 0.00 35.92 2.01
61 62 5.308497 TCCAGTTAGGGACACAGATGTAAAA 59.692 40.000 0.00 0.00 35.92 1.52
62 63 5.643777 CCAGTTAGGGACACAGATGTAAAAG 59.356 44.000 0.00 0.00 39.95 2.27
63 64 6.464222 CAGTTAGGGACACAGATGTAAAAGA 58.536 40.000 0.00 0.00 39.95 2.52
64 65 6.369065 CAGTTAGGGACACAGATGTAAAAGAC 59.631 42.308 0.00 0.00 39.95 3.01
65 66 4.287766 AGGGACACAGATGTAAAAGACC 57.712 45.455 0.00 0.00 39.95 3.85
66 67 3.009143 AGGGACACAGATGTAAAAGACCC 59.991 47.826 0.00 0.00 39.95 4.46
67 68 3.009143 GGGACACAGATGTAAAAGACCCT 59.991 47.826 0.00 0.00 39.95 4.34
68 69 4.506802 GGGACACAGATGTAAAAGACCCTT 60.507 45.833 0.00 0.00 39.95 3.95
69 70 5.070685 GGACACAGATGTAAAAGACCCTTT 58.929 41.667 0.00 0.00 39.95 3.11
70 71 5.535030 GGACACAGATGTAAAAGACCCTTTT 59.465 40.000 9.29 9.29 39.95 2.27
71 72 6.040504 GGACACAGATGTAAAAGACCCTTTTT 59.959 38.462 9.57 0.00 39.95 1.94
72 73 6.805713 ACACAGATGTAAAAGACCCTTTTTG 58.194 36.000 9.57 5.08 37.26 2.44
73 74 6.379988 ACACAGATGTAAAAGACCCTTTTTGT 59.620 34.615 9.57 5.60 37.26 2.83
74 75 7.558444 ACACAGATGTAAAAGACCCTTTTTGTA 59.442 33.333 9.57 0.00 37.26 2.41
75 76 8.410141 CACAGATGTAAAAGACCCTTTTTGTAA 58.590 33.333 9.57 0.00 32.79 2.41
76 77 8.973182 ACAGATGTAAAAGACCCTTTTTGTAAA 58.027 29.630 9.57 0.00 32.79 2.01
77 78 9.244799 CAGATGTAAAAGACCCTTTTTGTAAAC 57.755 33.333 9.57 3.43 32.79 2.01
78 79 8.132995 AGATGTAAAAGACCCTTTTTGTAAACG 58.867 33.333 9.57 0.00 32.79 3.60
79 80 7.388460 TGTAAAAGACCCTTTTTGTAAACGA 57.612 32.000 9.57 0.00 32.79 3.85
80 81 7.249858 TGTAAAAGACCCTTTTTGTAAACGAC 58.750 34.615 9.57 1.67 32.79 4.34
81 82 5.900865 AAAGACCCTTTTTGTAAACGACA 57.099 34.783 0.00 0.00 35.78 4.35
82 83 4.888038 AGACCCTTTTTGTAAACGACAC 57.112 40.909 0.00 0.00 37.96 3.67
83 84 4.520179 AGACCCTTTTTGTAAACGACACT 58.480 39.130 0.00 0.00 37.96 3.55
84 85 5.673514 AGACCCTTTTTGTAAACGACACTA 58.326 37.500 0.00 0.00 37.96 2.74
85 86 6.293698 AGACCCTTTTTGTAAACGACACTAT 58.706 36.000 0.00 0.00 37.96 2.12
86 87 6.426025 AGACCCTTTTTGTAAACGACACTATC 59.574 38.462 0.00 0.00 37.96 2.08
87 88 6.056884 ACCCTTTTTGTAAACGACACTATCA 58.943 36.000 0.00 0.00 37.96 2.15
88 89 6.713450 ACCCTTTTTGTAAACGACACTATCAT 59.287 34.615 0.00 0.00 37.96 2.45
89 90 7.229907 ACCCTTTTTGTAAACGACACTATCATT 59.770 33.333 0.00 0.00 37.96 2.57
90 91 8.079809 CCCTTTTTGTAAACGACACTATCATTT 58.920 33.333 0.00 0.00 37.96 2.32
91 92 8.901748 CCTTTTTGTAAACGACACTATCATTTG 58.098 33.333 0.00 0.00 37.96 2.32
92 93 9.658475 CTTTTTGTAAACGACACTATCATTTGA 57.342 29.630 0.00 0.00 37.96 2.69
94 95 9.605955 TTTTGTAAACGACACTATCATTTGATG 57.394 29.630 3.30 0.00 37.96 3.07
95 96 8.541133 TTGTAAACGACACTATCATTTGATGA 57.459 30.769 3.30 0.00 39.98 2.92
96 97 8.541133 TGTAAACGACACTATCATTTGATGAA 57.459 30.769 3.30 0.00 36.52 2.57
97 98 8.440059 TGTAAACGACACTATCATTTGATGAAC 58.560 33.333 3.30 0.00 36.52 3.18
98 99 7.672983 AAACGACACTATCATTTGATGAACT 57.327 32.000 3.30 0.00 43.50 3.01
99 100 8.771920 AAACGACACTATCATTTGATGAACTA 57.228 30.769 3.30 0.00 43.50 2.24
100 101 7.993821 ACGACACTATCATTTGATGAACTAG 57.006 36.000 3.30 0.00 43.50 2.57
101 102 7.772166 ACGACACTATCATTTGATGAACTAGA 58.228 34.615 0.00 0.00 43.50 2.43
102 103 8.417106 ACGACACTATCATTTGATGAACTAGAT 58.583 33.333 0.00 0.00 43.50 1.98
103 104 8.697960 CGACACTATCATTTGATGAACTAGATG 58.302 37.037 0.00 0.00 43.50 2.90
104 105 9.755804 GACACTATCATTTGATGAACTAGATGA 57.244 33.333 0.00 0.00 43.50 2.92
110 111 7.453393 TCATTTGATGAACTAGATGATACCCC 58.547 38.462 0.00 0.00 36.11 4.95
111 112 5.468540 TTGATGAACTAGATGATACCCCG 57.531 43.478 0.00 0.00 0.00 5.73
112 113 3.258372 TGATGAACTAGATGATACCCCGC 59.742 47.826 0.00 0.00 0.00 6.13
113 114 2.673258 TGAACTAGATGATACCCCGCA 58.327 47.619 0.00 0.00 0.00 5.69
114 115 2.364324 TGAACTAGATGATACCCCGCAC 59.636 50.000 0.00 0.00 0.00 5.34
115 116 0.959553 ACTAGATGATACCCCGCACG 59.040 55.000 0.00 0.00 0.00 5.34
116 117 0.959553 CTAGATGATACCCCGCACGT 59.040 55.000 0.00 0.00 0.00 4.49
117 118 1.340248 CTAGATGATACCCCGCACGTT 59.660 52.381 0.00 0.00 0.00 3.99
118 119 0.179084 AGATGATACCCCGCACGTTG 60.179 55.000 0.00 0.00 0.00 4.10
119 120 0.461339 GATGATACCCCGCACGTTGT 60.461 55.000 0.00 0.00 0.00 3.32
120 121 0.035820 ATGATACCCCGCACGTTGTT 60.036 50.000 0.00 0.00 0.00 2.83
121 122 0.951525 TGATACCCCGCACGTTGTTG 60.952 55.000 0.00 0.00 0.00 3.33
122 123 2.248274 GATACCCCGCACGTTGTTGC 62.248 60.000 0.00 0.00 39.28 4.17
128 129 2.353030 GCACGTTGTTGCGGGAAC 60.353 61.111 5.34 5.34 37.48 3.62
129 130 3.102985 CACGTTGTTGCGGGAACA 58.897 55.556 11.22 11.22 43.11 3.18
130 131 1.652012 CACGTTGTTGCGGGAACAT 59.348 52.632 15.88 0.00 44.23 2.71
131 132 0.030101 CACGTTGTTGCGGGAACATT 59.970 50.000 15.88 1.25 44.23 2.71
132 133 0.741915 ACGTTGTTGCGGGAACATTT 59.258 45.000 15.88 0.90 44.23 2.32
133 134 1.135333 ACGTTGTTGCGGGAACATTTT 59.865 42.857 15.88 0.55 44.23 1.82
134 135 2.358267 ACGTTGTTGCGGGAACATTTTA 59.642 40.909 15.88 0.00 44.23 1.52
135 136 2.722116 CGTTGTTGCGGGAACATTTTAC 59.278 45.455 15.88 9.92 44.23 2.01
136 137 3.707793 GTTGTTGCGGGAACATTTTACA 58.292 40.909 15.88 0.00 44.23 2.41
137 138 4.113354 GTTGTTGCGGGAACATTTTACAA 58.887 39.130 15.88 0.00 44.23 2.41
138 139 3.707793 TGTTGCGGGAACATTTTACAAC 58.292 40.909 11.22 0.00 39.78 3.32
139 140 3.130516 TGTTGCGGGAACATTTTACAACA 59.869 39.130 11.22 0.00 42.41 3.33
140 141 4.202161 TGTTGCGGGAACATTTTACAACAT 60.202 37.500 11.22 0.00 40.49 2.71
141 142 5.009710 TGTTGCGGGAACATTTTACAACATA 59.990 36.000 11.22 0.00 40.49 2.29
142 143 5.906113 TGCGGGAACATTTTACAACATAT 57.094 34.783 0.00 0.00 0.00 1.78
143 144 6.274157 TGCGGGAACATTTTACAACATATT 57.726 33.333 0.00 0.00 0.00 1.28
144 145 6.692486 TGCGGGAACATTTTACAACATATTT 58.308 32.000 0.00 0.00 0.00 1.40
145 146 6.809196 TGCGGGAACATTTTACAACATATTTC 59.191 34.615 0.00 0.00 0.00 2.17
146 147 6.809196 GCGGGAACATTTTACAACATATTTCA 59.191 34.615 0.00 0.00 0.00 2.69
147 148 7.329717 GCGGGAACATTTTACAACATATTTCAA 59.670 33.333 0.00 0.00 0.00 2.69
148 149 9.364989 CGGGAACATTTTACAACATATTTCAAT 57.635 29.630 0.00 0.00 0.00 2.57
303 304 9.362539 AGAATGAAAATTCTCATGTATGTTTGC 57.637 29.630 0.00 0.00 36.20 3.68
304 305 9.142515 GAATGAAAATTCTCATGTATGTTTGCA 57.857 29.630 0.00 0.00 36.16 4.08
305 306 9.661563 AATGAAAATTCTCATGTATGTTTGCAT 57.338 25.926 0.00 0.00 36.16 3.96
311 312 9.961265 AATTCTCATGTATGTTTGCATATTGAG 57.039 29.630 16.12 16.12 43.24 3.02
312 313 8.735692 TTCTCATGTATGTTTGCATATTGAGA 57.264 30.769 18.51 18.51 45.38 3.27
313 314 8.913487 TCTCATGTATGTTTGCATATTGAGAT 57.087 30.769 18.51 0.00 44.15 2.75
314 315 8.780249 TCTCATGTATGTTTGCATATTGAGATG 58.220 33.333 18.51 4.95 44.15 2.90
315 316 8.680039 TCATGTATGTTTGCATATTGAGATGA 57.320 30.769 0.00 0.00 39.49 2.92
316 317 8.780249 TCATGTATGTTTGCATATTGAGATGAG 58.220 33.333 0.00 0.00 39.49 2.90
317 318 8.565416 CATGTATGTTTGCATATTGAGATGAGT 58.435 33.333 0.00 0.00 39.49 3.41
318 319 8.510243 TGTATGTTTGCATATTGAGATGAGTT 57.490 30.769 0.00 0.00 39.49 3.01
319 320 8.959548 TGTATGTTTGCATATTGAGATGAGTTT 58.040 29.630 0.00 0.00 39.49 2.66
320 321 9.793252 GTATGTTTGCATATTGAGATGAGTTTT 57.207 29.630 0.00 0.00 39.49 2.43
341 342 5.635417 TTTTTCCGTGCATGTTATGATGA 57.365 34.783 4.96 0.00 0.00 2.92
342 343 5.635417 TTTTCCGTGCATGTTATGATGAA 57.365 34.783 4.96 0.00 0.00 2.57
343 344 4.880886 TTCCGTGCATGTTATGATGAAG 57.119 40.909 4.96 0.00 0.00 3.02
344 345 3.872696 TCCGTGCATGTTATGATGAAGT 58.127 40.909 4.96 0.00 0.00 3.01
345 346 3.622612 TCCGTGCATGTTATGATGAAGTG 59.377 43.478 4.96 0.00 0.00 3.16
346 347 3.242837 CCGTGCATGTTATGATGAAGTGG 60.243 47.826 4.96 0.00 0.00 4.00
347 348 3.699067 GTGCATGTTATGATGAAGTGGC 58.301 45.455 0.00 0.00 0.00 5.01
348 349 3.129113 GTGCATGTTATGATGAAGTGGCA 59.871 43.478 0.00 0.00 0.00 4.92
349 350 3.955551 TGCATGTTATGATGAAGTGGCAT 59.044 39.130 0.00 0.00 0.00 4.40
350 351 4.202070 TGCATGTTATGATGAAGTGGCATG 60.202 41.667 0.00 0.00 36.51 4.06
351 352 4.295870 CATGTTATGATGAAGTGGCATGC 58.704 43.478 9.90 9.90 0.00 4.06
352 353 3.623703 TGTTATGATGAAGTGGCATGCT 58.376 40.909 18.92 0.00 0.00 3.79
353 354 4.018490 TGTTATGATGAAGTGGCATGCTT 58.982 39.130 18.92 3.65 0.00 3.91
354 355 4.142337 TGTTATGATGAAGTGGCATGCTTG 60.142 41.667 18.92 0.00 0.00 4.01
368 369 4.895224 CATGCTTGCATGTTGAGATACT 57.105 40.909 23.00 0.00 0.00 2.12
369 370 5.996669 CATGCTTGCATGTTGAGATACTA 57.003 39.130 23.00 0.00 0.00 1.82
370 371 6.555812 CATGCTTGCATGTTGAGATACTAT 57.444 37.500 23.00 0.00 0.00 2.12
371 372 5.996669 TGCTTGCATGTTGAGATACTATG 57.003 39.130 1.14 0.00 0.00 2.23
372 373 4.818005 TGCTTGCATGTTGAGATACTATGG 59.182 41.667 1.14 0.00 0.00 2.74
373 374 4.818546 GCTTGCATGTTGAGATACTATGGT 59.181 41.667 1.14 0.00 0.00 3.55
374 375 5.991606 GCTTGCATGTTGAGATACTATGGTA 59.008 40.000 1.14 0.00 0.00 3.25
375 376 6.146837 GCTTGCATGTTGAGATACTATGGTAG 59.853 42.308 1.14 0.00 0.00 3.18
376 377 6.731292 TGCATGTTGAGATACTATGGTAGT 57.269 37.500 0.00 0.00 42.68 2.73
377 378 6.515832 TGCATGTTGAGATACTATGGTAGTG 58.484 40.000 0.00 0.00 39.81 2.74
378 379 6.323739 TGCATGTTGAGATACTATGGTAGTGA 59.676 38.462 0.00 0.00 39.81 3.41
379 380 6.865726 GCATGTTGAGATACTATGGTAGTGAG 59.134 42.308 0.00 0.00 39.81 3.51
380 381 6.961360 TGTTGAGATACTATGGTAGTGAGG 57.039 41.667 0.00 0.00 39.81 3.86
381 382 5.833667 TGTTGAGATACTATGGTAGTGAGGG 59.166 44.000 0.00 0.00 39.81 4.30
382 383 5.664815 TGAGATACTATGGTAGTGAGGGT 57.335 43.478 0.00 0.00 39.81 4.34
383 384 5.386060 TGAGATACTATGGTAGTGAGGGTG 58.614 45.833 0.00 0.00 39.81 4.61
384 385 4.742012 AGATACTATGGTAGTGAGGGTGG 58.258 47.826 0.00 0.00 39.81 4.61
385 386 4.419200 AGATACTATGGTAGTGAGGGTGGA 59.581 45.833 0.00 0.00 39.81 4.02
386 387 3.708236 ACTATGGTAGTGAGGGTGGAT 57.292 47.619 0.00 0.00 37.69 3.41
387 388 3.577919 ACTATGGTAGTGAGGGTGGATC 58.422 50.000 0.00 0.00 37.69 3.36
388 389 2.877154 ATGGTAGTGAGGGTGGATCT 57.123 50.000 0.00 0.00 0.00 2.75
389 390 2.642171 TGGTAGTGAGGGTGGATCTT 57.358 50.000 0.00 0.00 0.00 2.40
390 391 2.915869 TGGTAGTGAGGGTGGATCTTT 58.084 47.619 0.00 0.00 0.00 2.52
391 392 3.256704 TGGTAGTGAGGGTGGATCTTTT 58.743 45.455 0.00 0.00 0.00 2.27
392 393 3.263425 TGGTAGTGAGGGTGGATCTTTTC 59.737 47.826 0.00 0.00 0.00 2.29
393 394 3.519913 GGTAGTGAGGGTGGATCTTTTCT 59.480 47.826 0.00 0.00 0.00 2.52
394 395 3.990959 AGTGAGGGTGGATCTTTTCTC 57.009 47.619 0.00 0.00 0.00 2.87
395 396 3.251484 AGTGAGGGTGGATCTTTTCTCA 58.749 45.455 0.00 0.00 0.00 3.27
396 397 3.848975 AGTGAGGGTGGATCTTTTCTCAT 59.151 43.478 10.67 1.96 34.42 2.90
397 398 3.944015 GTGAGGGTGGATCTTTTCTCATG 59.056 47.826 10.67 0.00 34.42 3.07
398 399 2.948315 GAGGGTGGATCTTTTCTCATGC 59.052 50.000 0.00 0.00 0.00 4.06
399 400 2.309755 AGGGTGGATCTTTTCTCATGCA 59.690 45.455 0.00 0.00 0.00 3.96
400 401 3.053095 AGGGTGGATCTTTTCTCATGCAT 60.053 43.478 0.00 0.00 0.00 3.96
401 402 3.067742 GGGTGGATCTTTTCTCATGCATG 59.932 47.826 21.07 21.07 0.00 4.06
402 403 3.698040 GGTGGATCTTTTCTCATGCATGT 59.302 43.478 25.43 4.14 0.00 3.21
403 404 4.159135 GGTGGATCTTTTCTCATGCATGTT 59.841 41.667 25.43 2.80 0.00 2.71
404 405 5.100259 GTGGATCTTTTCTCATGCATGTTG 58.900 41.667 25.43 18.71 0.00 3.33
405 406 4.768448 TGGATCTTTTCTCATGCATGTTGT 59.232 37.500 25.43 5.38 0.00 3.32
406 407 5.100259 GGATCTTTTCTCATGCATGTTGTG 58.900 41.667 25.43 14.20 0.00 3.33
407 408 5.106038 GGATCTTTTCTCATGCATGTTGTGA 60.106 40.000 25.43 16.03 0.00 3.58
408 409 5.366829 TCTTTTCTCATGCATGTTGTGAG 57.633 39.130 25.43 16.33 40.48 3.51
409 410 5.065235 TCTTTTCTCATGCATGTTGTGAGA 58.935 37.500 25.43 18.36 44.70 3.27
410 411 5.708697 TCTTTTCTCATGCATGTTGTGAGAT 59.291 36.000 25.43 0.00 45.41 2.75
411 412 4.957759 TTCTCATGCATGTTGTGAGATG 57.042 40.909 25.43 0.00 45.41 2.90
412 413 4.210724 TCTCATGCATGTTGTGAGATGA 57.789 40.909 25.43 2.85 42.36 2.92
413 414 4.777463 TCTCATGCATGTTGTGAGATGAT 58.223 39.130 25.43 0.00 42.36 2.45
414 415 4.574828 TCTCATGCATGTTGTGAGATGATG 59.425 41.667 25.43 0.00 42.36 3.07
415 416 4.266714 TCATGCATGTTGTGAGATGATGT 58.733 39.130 25.43 0.00 0.00 3.06
416 417 4.095782 TCATGCATGTTGTGAGATGATGTG 59.904 41.667 25.43 0.00 0.00 3.21
417 418 2.750712 TGCATGTTGTGAGATGATGTGG 59.249 45.455 0.00 0.00 0.00 4.17
418 419 2.479049 GCATGTTGTGAGATGATGTGGC 60.479 50.000 0.00 0.00 0.00 5.01
419 420 2.565046 TGTTGTGAGATGATGTGGCA 57.435 45.000 0.00 0.00 0.00 4.92
420 421 3.076079 TGTTGTGAGATGATGTGGCAT 57.924 42.857 0.00 0.00 0.00 4.40
421 422 2.750712 TGTTGTGAGATGATGTGGCATG 59.249 45.455 0.00 0.00 0.00 4.06
422 423 1.385528 TGTGAGATGATGTGGCATGC 58.614 50.000 9.90 9.90 0.00 4.06
423 424 1.064979 TGTGAGATGATGTGGCATGCT 60.065 47.619 18.92 0.00 0.00 3.79
424 425 2.022195 GTGAGATGATGTGGCATGCTT 58.978 47.619 18.92 0.00 0.00 3.91
425 426 2.021457 TGAGATGATGTGGCATGCTTG 58.979 47.619 18.92 0.00 0.00 4.01
439 440 4.707030 CATGCTTGCATGTTAGGAGAAA 57.293 40.909 23.00 0.00 0.00 2.52
440 441 5.258456 CATGCTTGCATGTTAGGAGAAAT 57.742 39.130 23.00 0.00 0.00 2.17
441 442 6.381481 CATGCTTGCATGTTAGGAGAAATA 57.619 37.500 23.00 0.00 0.00 1.40
442 443 6.436261 CATGCTTGCATGTTAGGAGAAATAG 58.564 40.000 23.00 0.00 0.00 1.73
443 444 5.500234 TGCTTGCATGTTAGGAGAAATAGT 58.500 37.500 1.14 0.00 0.00 2.12
444 445 5.945784 TGCTTGCATGTTAGGAGAAATAGTT 59.054 36.000 1.14 0.00 0.00 2.24
445 446 7.109501 TGCTTGCATGTTAGGAGAAATAGTTA 58.890 34.615 1.14 0.00 0.00 2.24
446 447 7.609918 TGCTTGCATGTTAGGAGAAATAGTTAA 59.390 33.333 1.14 0.00 0.00 2.01
447 448 8.624776 GCTTGCATGTTAGGAGAAATAGTTAAT 58.375 33.333 1.14 0.00 0.00 1.40
448 449 9.941664 CTTGCATGTTAGGAGAAATAGTTAATG 57.058 33.333 0.00 0.00 0.00 1.90
449 450 8.450578 TGCATGTTAGGAGAAATAGTTAATGG 57.549 34.615 0.00 0.00 0.00 3.16
450 451 7.502226 TGCATGTTAGGAGAAATAGTTAATGGG 59.498 37.037 0.00 0.00 0.00 4.00
451 452 7.040409 GCATGTTAGGAGAAATAGTTAATGGGG 60.040 40.741 0.00 0.00 0.00 4.96
452 453 6.906848 TGTTAGGAGAAATAGTTAATGGGGG 58.093 40.000 0.00 0.00 0.00 5.40
453 454 4.455070 AGGAGAAATAGTTAATGGGGGC 57.545 45.455 0.00 0.00 0.00 5.80
454 455 4.055094 AGGAGAAATAGTTAATGGGGGCT 58.945 43.478 0.00 0.00 0.00 5.19
455 456 5.232347 AGGAGAAATAGTTAATGGGGGCTA 58.768 41.667 0.00 0.00 0.00 3.93
456 457 5.310857 AGGAGAAATAGTTAATGGGGGCTAG 59.689 44.000 0.00 0.00 0.00 3.42
457 458 4.986783 AGAAATAGTTAATGGGGGCTAGC 58.013 43.478 6.04 6.04 0.00 3.42
458 459 4.665483 AGAAATAGTTAATGGGGGCTAGCT 59.335 41.667 15.72 0.00 0.00 3.32
459 460 5.850028 AGAAATAGTTAATGGGGGCTAGCTA 59.150 40.000 15.72 0.00 0.00 3.32
460 461 6.505700 AGAAATAGTTAATGGGGGCTAGCTAT 59.494 38.462 15.72 1.73 0.00 2.97
461 462 6.720217 AATAGTTAATGGGGGCTAGCTATT 57.280 37.500 15.72 12.29 30.90 1.73
462 463 6.720217 ATAGTTAATGGGGGCTAGCTATTT 57.280 37.500 15.72 4.64 0.00 1.40
463 464 7.824365 ATAGTTAATGGGGGCTAGCTATTTA 57.176 36.000 15.72 3.71 0.00 1.40
464 465 6.128138 AGTTAATGGGGGCTAGCTATTTAG 57.872 41.667 15.72 0.00 0.00 1.85
465 466 5.850028 AGTTAATGGGGGCTAGCTATTTAGA 59.150 40.000 15.72 0.00 0.00 2.10
466 467 6.505700 AGTTAATGGGGGCTAGCTATTTAGAT 59.494 38.462 15.72 0.00 0.00 1.98
467 468 7.682890 AGTTAATGGGGGCTAGCTATTTAGATA 59.317 37.037 15.72 0.00 0.00 1.98
468 469 8.495260 GTTAATGGGGGCTAGCTATTTAGATAT 58.505 37.037 15.72 0.00 0.00 1.63
469 470 9.738277 TTAATGGGGGCTAGCTATTTAGATATA 57.262 33.333 15.72 0.00 0.00 0.86
470 471 7.863901 ATGGGGGCTAGCTATTTAGATATAG 57.136 40.000 15.72 0.00 0.00 1.31
471 472 6.993408 TGGGGGCTAGCTATTTAGATATAGA 58.007 40.000 15.72 0.00 31.10 1.98
472 473 7.427501 TGGGGGCTAGCTATTTAGATATAGAA 58.572 38.462 15.72 0.00 31.10 2.10
473 474 7.565398 TGGGGGCTAGCTATTTAGATATAGAAG 59.435 40.741 15.72 0.00 31.10 2.85
474 475 7.785506 GGGGGCTAGCTATTTAGATATAGAAGA 59.214 40.741 15.72 0.00 31.10 2.87
475 476 9.374711 GGGGCTAGCTATTTAGATATAGAAGAT 57.625 37.037 15.72 0.00 31.10 2.40
520 521 2.490509 AGGCGCAAAAATGGTAACTACC 59.509 45.455 10.83 0.00 46.62 3.18
581 582 1.628846 GTGGGGCTTGACTAAGGAAGA 59.371 52.381 0.00 0.00 34.40 2.87
747 755 1.003233 CCCTGACCCTTTACCACTCAC 59.997 57.143 0.00 0.00 0.00 3.51
750 758 3.517901 CCTGACCCTTTACCACTCACATA 59.482 47.826 0.00 0.00 0.00 2.29
753 761 4.780554 TGACCCTTTACCACTCACATATGA 59.219 41.667 10.38 0.00 0.00 2.15
766 774 5.039920 TCACATATGAATCTGGTCCCTTG 57.960 43.478 10.38 0.00 0.00 3.61
768 776 3.461085 ACATATGAATCTGGTCCCTTGCT 59.539 43.478 10.38 0.00 0.00 3.91
809 817 1.394917 GATTCAGCAGCACCTAACGTG 59.605 52.381 0.00 0.00 46.03 4.49
822 830 1.531149 CTAACGTGTGAGTTTGGGCTG 59.469 52.381 0.00 0.00 35.70 4.85
868 882 1.541310 TAACCAGACCTGCCCGACAG 61.541 60.000 0.00 0.00 46.77 3.51
889 903 4.039973 CAGGTGACAAGTAGGGTACAAAGA 59.960 45.833 0.00 0.00 0.00 2.52
988 1002 2.548875 CTTCTAGCAAGCTAGGCACAG 58.451 52.381 24.40 13.74 44.45 3.66
1211 1229 3.254166 GCCTTGGTCGTCGAGGTATTATA 59.746 47.826 4.85 0.00 46.73 0.98
1212 1230 4.082354 GCCTTGGTCGTCGAGGTATTATAT 60.082 45.833 4.85 0.00 46.73 0.86
1213 1231 5.124457 GCCTTGGTCGTCGAGGTATTATATA 59.876 44.000 4.85 0.00 46.73 0.86
1214 1232 6.183360 GCCTTGGTCGTCGAGGTATTATATAT 60.183 42.308 4.85 0.00 46.73 0.86
1226 1244 7.649705 CGAGGTATTATATATCATGCAGACACC 59.350 40.741 0.00 0.00 0.00 4.16
1227 1245 7.796054 AGGTATTATATATCATGCAGACACCC 58.204 38.462 0.00 0.00 0.00 4.61
1228 1246 7.402941 AGGTATTATATATCATGCAGACACCCA 59.597 37.037 0.00 0.00 0.00 4.51
1229 1247 7.712639 GGTATTATATATCATGCAGACACCCAG 59.287 40.741 0.00 0.00 0.00 4.45
1230 1248 6.686484 TTATATATCATGCAGACACCCAGT 57.314 37.500 0.00 0.00 0.00 4.00
1231 1249 2.696989 TATCATGCAGACACCCAGTG 57.303 50.000 0.00 0.00 39.75 3.66
1232 1250 0.034767 ATCATGCAGACACCCAGTGG 60.035 55.000 0.63 0.63 37.94 4.00
1239 1257 3.168528 ACACCCAGTGGCGGAGTT 61.169 61.111 2.61 0.00 37.94 3.01
1240 1258 1.823169 GACACCCAGTGGCGGAGTTA 61.823 60.000 2.61 0.00 37.94 2.24
1241 1259 1.079127 CACCCAGTGGCGGAGTTAG 60.079 63.158 2.61 0.00 33.59 2.34
1242 1260 1.229082 ACCCAGTGGCGGAGTTAGA 60.229 57.895 2.61 0.00 33.59 2.10
1243 1261 0.617820 ACCCAGTGGCGGAGTTAGAT 60.618 55.000 2.61 0.00 33.59 1.98
1244 1262 0.179073 CCCAGTGGCGGAGTTAGATG 60.179 60.000 2.61 0.00 0.00 2.90
1245 1263 0.811616 CCAGTGGCGGAGTTAGATGC 60.812 60.000 0.00 0.00 0.00 3.91
1246 1264 0.108186 CAGTGGCGGAGTTAGATGCA 60.108 55.000 0.00 0.00 0.00 3.96
1247 1265 0.176680 AGTGGCGGAGTTAGATGCAG 59.823 55.000 0.00 0.00 0.00 4.41
1248 1266 0.175760 GTGGCGGAGTTAGATGCAGA 59.824 55.000 0.00 0.00 0.00 4.26
1249 1267 1.123077 TGGCGGAGTTAGATGCAGAT 58.877 50.000 0.00 0.00 0.00 2.90
1250 1268 1.486310 TGGCGGAGTTAGATGCAGATT 59.514 47.619 0.00 0.00 0.00 2.40
1251 1269 2.698274 TGGCGGAGTTAGATGCAGATTA 59.302 45.455 0.00 0.00 0.00 1.75
1252 1270 3.060602 GGCGGAGTTAGATGCAGATTAC 58.939 50.000 0.00 0.00 0.00 1.89
1253 1271 2.726760 GCGGAGTTAGATGCAGATTACG 59.273 50.000 0.00 0.00 0.00 3.18
1254 1272 2.726760 CGGAGTTAGATGCAGATTACGC 59.273 50.000 0.00 0.00 0.00 4.42
1255 1273 3.060602 GGAGTTAGATGCAGATTACGCC 58.939 50.000 0.00 0.00 0.00 5.68
1256 1274 3.243907 GGAGTTAGATGCAGATTACGCCT 60.244 47.826 0.00 0.00 0.00 5.52
1257 1275 4.022242 GGAGTTAGATGCAGATTACGCCTA 60.022 45.833 0.00 0.00 0.00 3.93
1258 1276 5.127693 AGTTAGATGCAGATTACGCCTAG 57.872 43.478 0.00 0.00 0.00 3.02
1259 1277 4.021894 AGTTAGATGCAGATTACGCCTAGG 60.022 45.833 3.67 3.67 0.00 3.02
1260 1278 1.620819 AGATGCAGATTACGCCTAGGG 59.379 52.381 11.72 3.13 0.00 3.53
1261 1279 0.035458 ATGCAGATTACGCCTAGGGC 59.965 55.000 11.72 3.01 46.75 5.19
1273 1291 2.704572 GCCTAGGGCTGTGCTATATTG 58.295 52.381 11.72 0.00 46.69 1.90
1274 1292 2.303022 GCCTAGGGCTGTGCTATATTGA 59.697 50.000 11.72 0.00 46.69 2.57
1275 1293 3.618507 GCCTAGGGCTGTGCTATATTGAG 60.619 52.174 11.72 0.00 46.69 3.02
1276 1294 3.580458 CCTAGGGCTGTGCTATATTGAGT 59.420 47.826 0.00 0.00 0.00 3.41
1277 1295 3.482156 AGGGCTGTGCTATATTGAGTG 57.518 47.619 0.00 0.00 0.00 3.51
1278 1296 3.041211 AGGGCTGTGCTATATTGAGTGA 58.959 45.455 0.00 0.00 0.00 3.41
1279 1297 3.649981 AGGGCTGTGCTATATTGAGTGAT 59.350 43.478 0.00 0.00 0.00 3.06
1280 1298 4.840680 AGGGCTGTGCTATATTGAGTGATA 59.159 41.667 0.00 0.00 0.00 2.15
1281 1299 5.307976 AGGGCTGTGCTATATTGAGTGATAA 59.692 40.000 0.00 0.00 0.00 1.75
1282 1300 5.997746 GGGCTGTGCTATATTGAGTGATAAA 59.002 40.000 0.00 0.00 0.00 1.40
1283 1301 6.073003 GGGCTGTGCTATATTGAGTGATAAAC 60.073 42.308 0.00 0.00 0.00 2.01
1284 1302 6.708054 GGCTGTGCTATATTGAGTGATAAACT 59.292 38.462 0.00 0.00 43.85 2.66
1285 1303 7.227512 GGCTGTGCTATATTGAGTGATAAACTT 59.772 37.037 0.00 0.00 40.07 2.66
1286 1304 8.279103 GCTGTGCTATATTGAGTGATAAACTTC 58.721 37.037 0.00 0.00 40.07 3.01
1287 1305 9.539825 CTGTGCTATATTGAGTGATAAACTTCT 57.460 33.333 0.00 0.00 40.07 2.85
1306 1324 9.578439 AAACTTCTATGATTTTCTATGCTTTGC 57.422 29.630 0.00 0.00 0.00 3.68
1307 1325 8.284945 ACTTCTATGATTTTCTATGCTTTGCA 57.715 30.769 0.00 0.00 44.86 4.08
1344 1362 4.890158 AAAAATTGTTTCTAGGCCTGGG 57.110 40.909 17.99 8.50 0.00 4.45
1345 1363 2.532250 AATTGTTTCTAGGCCTGGGG 57.468 50.000 17.99 5.64 0.00 4.96
1364 1382 2.753055 GCTATAGCCCTAACTGCTCC 57.247 55.000 14.13 0.00 40.23 4.70
1365 1383 1.971357 GCTATAGCCCTAACTGCTCCA 59.029 52.381 14.13 0.00 40.23 3.86
1366 1384 2.028567 GCTATAGCCCTAACTGCTCCAG 60.029 54.545 14.13 0.00 40.23 3.86
1367 1385 1.428869 ATAGCCCTAACTGCTCCAGG 58.571 55.000 0.00 0.00 40.23 4.45
1368 1386 1.338136 TAGCCCTAACTGCTCCAGGC 61.338 60.000 0.00 0.00 40.23 4.85
1369 1387 2.187946 CCCTAACTGCTCCAGGCG 59.812 66.667 0.00 0.00 45.43 5.52
1370 1388 2.660064 CCCTAACTGCTCCAGGCGT 61.660 63.158 0.00 0.00 45.43 5.68
1371 1389 1.448540 CCTAACTGCTCCAGGCGTG 60.449 63.158 0.00 0.00 45.43 5.34
1372 1390 1.293498 CTAACTGCTCCAGGCGTGT 59.707 57.895 5.57 0.00 45.43 4.49
1373 1391 0.737715 CTAACTGCTCCAGGCGTGTC 60.738 60.000 5.57 0.00 45.43 3.67
1374 1392 1.185618 TAACTGCTCCAGGCGTGTCT 61.186 55.000 5.57 0.00 45.43 3.41
1375 1393 2.125753 CTGCTCCAGGCGTGTCTC 60.126 66.667 5.57 0.00 45.43 3.36
1376 1394 3.655810 CTGCTCCAGGCGTGTCTCC 62.656 68.421 5.57 0.00 45.43 3.71
1377 1395 4.803426 GCTCCAGGCGTGTCTCCG 62.803 72.222 5.57 0.00 0.00 4.63
1408 1426 7.335171 TGTATGTAGTACAGATGTTCACGTAGT 59.665 37.037 9.25 0.00 39.11 2.73
1595 1625 3.179265 CGTCAAGGTACGCGCCAG 61.179 66.667 5.73 0.00 35.87 4.85
1613 1643 2.609350 CAGCACTTGCAAGTTTGTGTT 58.391 42.857 29.23 14.14 45.16 3.32
1614 1644 3.428725 CCAGCACTTGCAAGTTTGTGTTA 60.429 43.478 29.23 0.00 45.16 2.41
1646 1685 2.279650 GTGCACGTACACACCCGT 60.280 61.111 14.08 0.00 40.40 5.28
1657 1696 0.029700 CACACCCGTATGCATGCATG 59.970 55.000 37.43 25.54 37.82 4.06
1939 1979 1.348036 GTCAGAGGTATACCCATGCCC 59.652 57.143 18.65 7.73 37.63 5.36
1945 1985 1.907255 GGTATACCCATGCCCTACCTC 59.093 57.143 11.17 0.00 31.02 3.85
1960 2000 4.081365 CCCTACCTCTCTCTTTGTTCCTTC 60.081 50.000 0.00 0.00 0.00 3.46
1983 2023 1.634702 GTGACTCAGCGATTCTGTCC 58.365 55.000 0.00 0.00 43.32 4.02
2216 2256 3.688553 GGTACCTACTCATGCAGCC 57.311 57.895 4.06 0.00 0.00 4.85
2230 2270 0.445436 GCAGCCTGAGATTCAACGTG 59.555 55.000 0.00 0.00 0.00 4.49
2304 2344 2.501071 GAGCATAGTCGCTTCGCTC 58.499 57.895 11.45 11.45 44.01 5.03
2397 2437 1.992557 AGCCTTTACCCTGACATTCCA 59.007 47.619 0.00 0.00 0.00 3.53
2496 2539 3.298115 TAACGCGCCGATGGTGGAA 62.298 57.895 5.73 0.00 33.18 3.53
2528 2571 5.515626 CAGTTTATCCTACGTGTGCTTAGAC 59.484 44.000 0.00 0.00 0.00 2.59
2537 2580 2.792890 CGTGTGCTTAGACCAGATCGAG 60.793 54.545 0.00 0.00 0.00 4.04
2589 2632 5.348164 GCTTTGTTTTTCTAGTTTGAGGCA 58.652 37.500 0.00 0.00 0.00 4.75
2753 2796 3.275999 GTTTCCCGCATGTTATACACCT 58.724 45.455 0.00 0.00 0.00 4.00
2777 2820 2.202395 GCAAAGGGCTGGCTGTGAA 61.202 57.895 0.00 0.00 40.25 3.18
2794 2837 3.178540 AACCCCGTGACAGGCACTC 62.179 63.158 4.45 0.00 45.49 3.51
2874 2917 1.536766 CTTCAGGCTTTTCGTGCATCA 59.463 47.619 0.00 0.00 0.00 3.07
3301 3371 8.149647 AGTTAATTTTTCATGACAAGGATGCAA 58.850 29.630 0.00 0.00 0.00 4.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.658609 CATATTTGCCCTTAATTTTGAAGTGTG 58.341 33.333 0.00 0.00 0.00 3.82
1 2 8.592809 TCATATTTGCCCTTAATTTTGAAGTGT 58.407 29.630 0.00 0.00 0.00 3.55
2 3 9.090692 CTCATATTTGCCCTTAATTTTGAAGTG 57.909 33.333 0.00 0.00 0.00 3.16
3 4 8.815912 ACTCATATTTGCCCTTAATTTTGAAGT 58.184 29.630 0.00 0.00 0.00 3.01
6 7 9.474313 ACTACTCATATTTGCCCTTAATTTTGA 57.526 29.630 0.00 0.00 0.00 2.69
7 8 9.520204 CACTACTCATATTTGCCCTTAATTTTG 57.480 33.333 0.00 0.00 0.00 2.44
8 9 8.695456 CCACTACTCATATTTGCCCTTAATTTT 58.305 33.333 0.00 0.00 0.00 1.82
9 10 7.287696 CCCACTACTCATATTTGCCCTTAATTT 59.712 37.037 0.00 0.00 0.00 1.82
10 11 6.777580 CCCACTACTCATATTTGCCCTTAATT 59.222 38.462 0.00 0.00 0.00 1.40
11 12 6.126185 ACCCACTACTCATATTTGCCCTTAAT 60.126 38.462 0.00 0.00 0.00 1.40
12 13 5.192923 ACCCACTACTCATATTTGCCCTTAA 59.807 40.000 0.00 0.00 0.00 1.85
13 14 4.724798 ACCCACTACTCATATTTGCCCTTA 59.275 41.667 0.00 0.00 0.00 2.69
14 15 3.527665 ACCCACTACTCATATTTGCCCTT 59.472 43.478 0.00 0.00 0.00 3.95
15 16 3.123273 ACCCACTACTCATATTTGCCCT 58.877 45.455 0.00 0.00 0.00 5.19
16 17 3.577805 ACCCACTACTCATATTTGCCC 57.422 47.619 0.00 0.00 0.00 5.36
17 18 3.883489 GGAACCCACTACTCATATTTGCC 59.117 47.826 0.00 0.00 0.00 4.52
18 19 4.523083 TGGAACCCACTACTCATATTTGC 58.477 43.478 0.00 0.00 0.00 3.68
19 20 5.745227 ACTGGAACCCACTACTCATATTTG 58.255 41.667 0.00 0.00 0.00 2.32
20 21 6.388619 AACTGGAACCCACTACTCATATTT 57.611 37.500 0.00 0.00 0.00 1.40
21 22 6.099845 CCTAACTGGAACCCACTACTCATATT 59.900 42.308 0.00 0.00 38.35 1.28
22 23 5.602978 CCTAACTGGAACCCACTACTCATAT 59.397 44.000 0.00 0.00 38.35 1.78
23 24 4.960469 CCTAACTGGAACCCACTACTCATA 59.040 45.833 0.00 0.00 38.35 2.15
24 25 3.775316 CCTAACTGGAACCCACTACTCAT 59.225 47.826 0.00 0.00 38.35 2.90
25 26 3.170717 CCTAACTGGAACCCACTACTCA 58.829 50.000 0.00 0.00 38.35 3.41
26 27 2.500504 CCCTAACTGGAACCCACTACTC 59.499 54.545 0.00 0.00 38.35 2.59
27 28 2.113052 TCCCTAACTGGAACCCACTACT 59.887 50.000 0.00 0.00 38.35 2.57
28 29 2.235650 GTCCCTAACTGGAACCCACTAC 59.764 54.545 0.00 0.00 35.80 2.73
29 30 2.158127 TGTCCCTAACTGGAACCCACTA 60.158 50.000 0.00 0.00 35.80 2.74
30 31 1.359168 GTCCCTAACTGGAACCCACT 58.641 55.000 0.00 0.00 35.80 4.00
31 32 1.061546 TGTCCCTAACTGGAACCCAC 58.938 55.000 0.00 0.00 35.80 4.61
32 33 1.061546 GTGTCCCTAACTGGAACCCA 58.938 55.000 0.00 0.00 35.80 4.51
33 34 1.003233 CTGTGTCCCTAACTGGAACCC 59.997 57.143 0.00 0.00 35.80 4.11
34 35 1.975680 TCTGTGTCCCTAACTGGAACC 59.024 52.381 0.00 0.00 35.80 3.62
35 36 3.008049 ACATCTGTGTCCCTAACTGGAAC 59.992 47.826 0.00 0.00 35.80 3.62
36 37 3.248024 ACATCTGTGTCCCTAACTGGAA 58.752 45.455 0.00 0.00 35.80 3.53
37 38 2.902608 ACATCTGTGTCCCTAACTGGA 58.097 47.619 0.00 0.00 33.03 3.86
38 39 4.819105 TTACATCTGTGTCCCTAACTGG 57.181 45.455 0.00 0.00 39.77 4.00
39 40 6.369065 GTCTTTTACATCTGTGTCCCTAACTG 59.631 42.308 0.00 0.00 39.77 3.16
40 41 6.465084 GTCTTTTACATCTGTGTCCCTAACT 58.535 40.000 0.00 0.00 39.77 2.24
41 42 5.642491 GGTCTTTTACATCTGTGTCCCTAAC 59.358 44.000 0.00 0.00 39.77 2.34
42 43 5.280317 GGGTCTTTTACATCTGTGTCCCTAA 60.280 44.000 0.00 0.00 39.77 2.69
43 44 4.224370 GGGTCTTTTACATCTGTGTCCCTA 59.776 45.833 0.00 0.00 39.77 3.53
44 45 3.009143 GGGTCTTTTACATCTGTGTCCCT 59.991 47.826 0.00 0.00 39.77 4.20
45 46 3.009143 AGGGTCTTTTACATCTGTGTCCC 59.991 47.826 0.00 0.00 39.77 4.46
46 47 4.287766 AGGGTCTTTTACATCTGTGTCC 57.712 45.455 0.00 0.00 39.77 4.02
47 48 6.635030 AAAAGGGTCTTTTACATCTGTGTC 57.365 37.500 4.07 0.00 39.77 3.67
48 49 6.379988 ACAAAAAGGGTCTTTTACATCTGTGT 59.620 34.615 6.13 3.30 42.39 3.72
49 50 6.805713 ACAAAAAGGGTCTTTTACATCTGTG 58.194 36.000 6.13 2.78 0.00 3.66
50 51 8.528044 TTACAAAAAGGGTCTTTTACATCTGT 57.472 30.769 6.13 8.60 0.00 3.41
51 52 9.244799 GTTTACAAAAAGGGTCTTTTACATCTG 57.755 33.333 6.13 3.93 0.00 2.90
52 53 8.132995 CGTTTACAAAAAGGGTCTTTTACATCT 58.867 33.333 6.13 0.00 0.00 2.90
53 54 8.130469 TCGTTTACAAAAAGGGTCTTTTACATC 58.870 33.333 6.13 0.00 32.55 3.06
54 55 7.916977 GTCGTTTACAAAAAGGGTCTTTTACAT 59.083 33.333 6.13 0.00 32.55 2.29
55 56 7.094463 TGTCGTTTACAAAAAGGGTCTTTTACA 60.094 33.333 6.13 2.71 34.29 2.41
56 57 7.218773 GTGTCGTTTACAAAAAGGGTCTTTTAC 59.781 37.037 6.13 1.02 40.63 2.01
57 58 7.121020 AGTGTCGTTTACAAAAAGGGTCTTTTA 59.879 33.333 6.13 0.00 40.63 1.52
58 59 6.071784 AGTGTCGTTTACAAAAAGGGTCTTTT 60.072 34.615 0.33 0.33 40.63 2.27
59 60 5.416639 AGTGTCGTTTACAAAAAGGGTCTTT 59.583 36.000 0.00 0.00 40.63 2.52
60 61 4.945543 AGTGTCGTTTACAAAAAGGGTCTT 59.054 37.500 0.00 0.00 40.63 3.01
61 62 4.520179 AGTGTCGTTTACAAAAAGGGTCT 58.480 39.130 0.00 0.00 40.63 3.85
62 63 4.888038 AGTGTCGTTTACAAAAAGGGTC 57.112 40.909 0.00 0.00 40.63 4.46
63 64 6.056884 TGATAGTGTCGTTTACAAAAAGGGT 58.943 36.000 0.00 0.00 40.63 4.34
64 65 6.548441 TGATAGTGTCGTTTACAAAAAGGG 57.452 37.500 0.00 0.00 40.63 3.95
65 66 8.901748 CAAATGATAGTGTCGTTTACAAAAAGG 58.098 33.333 6.74 0.00 42.68 3.11
66 67 9.658475 TCAAATGATAGTGTCGTTTACAAAAAG 57.342 29.630 6.74 0.00 42.68 2.27
68 69 9.605955 CATCAAATGATAGTGTCGTTTACAAAA 57.394 29.630 6.74 0.00 42.68 2.44
69 70 8.994170 TCATCAAATGATAGTGTCGTTTACAAA 58.006 29.630 6.74 0.00 42.68 2.83
70 71 8.541133 TCATCAAATGATAGTGTCGTTTACAA 57.459 30.769 6.74 0.00 42.68 2.41
71 72 8.440059 GTTCATCAAATGATAGTGTCGTTTACA 58.560 33.333 6.74 0.00 42.68 2.41
72 73 8.656849 AGTTCATCAAATGATAGTGTCGTTTAC 58.343 33.333 6.74 2.49 42.68 2.01
73 74 8.771920 AGTTCATCAAATGATAGTGTCGTTTA 57.228 30.769 6.74 0.00 42.68 2.01
74 75 7.672983 AGTTCATCAAATGATAGTGTCGTTT 57.327 32.000 1.50 1.50 44.82 3.60
75 76 8.251026 TCTAGTTCATCAAATGATAGTGTCGTT 58.749 33.333 0.00 0.00 39.39 3.85
76 77 7.772166 TCTAGTTCATCAAATGATAGTGTCGT 58.228 34.615 0.00 0.00 39.39 4.34
77 78 8.697960 CATCTAGTTCATCAAATGATAGTGTCG 58.302 37.037 0.00 0.00 39.39 4.35
78 79 9.755804 TCATCTAGTTCATCAAATGATAGTGTC 57.244 33.333 0.00 0.00 39.39 3.67
84 85 8.105829 GGGGTATCATCTAGTTCATCAAATGAT 58.894 37.037 0.00 0.00 39.39 2.45
85 86 7.453393 GGGGTATCATCTAGTTCATCAAATGA 58.547 38.462 0.00 0.00 37.55 2.57
86 87 6.369890 CGGGGTATCATCTAGTTCATCAAATG 59.630 42.308 0.00 0.00 0.00 2.32
87 88 6.467677 CGGGGTATCATCTAGTTCATCAAAT 58.532 40.000 0.00 0.00 0.00 2.32
88 89 5.741964 GCGGGGTATCATCTAGTTCATCAAA 60.742 44.000 0.00 0.00 0.00 2.69
89 90 4.262463 GCGGGGTATCATCTAGTTCATCAA 60.262 45.833 0.00 0.00 0.00 2.57
90 91 3.258372 GCGGGGTATCATCTAGTTCATCA 59.742 47.826 0.00 0.00 0.00 3.07
91 92 3.258372 TGCGGGGTATCATCTAGTTCATC 59.742 47.826 0.00 0.00 0.00 2.92
92 93 3.006967 GTGCGGGGTATCATCTAGTTCAT 59.993 47.826 0.00 0.00 0.00 2.57
93 94 2.364324 GTGCGGGGTATCATCTAGTTCA 59.636 50.000 0.00 0.00 0.00 3.18
94 95 2.607282 CGTGCGGGGTATCATCTAGTTC 60.607 54.545 0.00 0.00 0.00 3.01
95 96 1.340248 CGTGCGGGGTATCATCTAGTT 59.660 52.381 0.00 0.00 0.00 2.24
96 97 0.959553 CGTGCGGGGTATCATCTAGT 59.040 55.000 0.00 0.00 0.00 2.57
97 98 0.959553 ACGTGCGGGGTATCATCTAG 59.040 55.000 0.00 0.00 0.00 2.43
98 99 1.067974 CAACGTGCGGGGTATCATCTA 59.932 52.381 0.00 0.00 0.00 1.98
99 100 0.179084 CAACGTGCGGGGTATCATCT 60.179 55.000 0.00 0.00 0.00 2.90
100 101 0.461339 ACAACGTGCGGGGTATCATC 60.461 55.000 0.00 0.00 0.00 2.92
101 102 0.035820 AACAACGTGCGGGGTATCAT 60.036 50.000 0.00 0.00 0.00 2.45
102 103 0.951525 CAACAACGTGCGGGGTATCA 60.952 55.000 0.00 0.00 0.00 2.15
103 104 1.791662 CAACAACGTGCGGGGTATC 59.208 57.895 0.00 0.00 0.00 2.24
104 105 2.329614 GCAACAACGTGCGGGGTAT 61.330 57.895 0.00 0.00 34.21 2.73
105 106 2.973600 GCAACAACGTGCGGGGTA 60.974 61.111 0.00 0.00 34.21 3.69
111 112 2.353030 GTTCCCGCAACAACGTGC 60.353 61.111 0.00 0.00 41.32 5.34
112 113 3.102985 TGTTCCCGCAACAACGTG 58.897 55.556 0.00 0.00 42.35 4.49
118 119 3.707793 TGTTGTAAAATGTTCCCGCAAC 58.292 40.909 0.00 0.00 36.33 4.17
119 120 4.592485 ATGTTGTAAAATGTTCCCGCAA 57.408 36.364 0.00 0.00 0.00 4.85
120 121 5.906113 ATATGTTGTAAAATGTTCCCGCA 57.094 34.783 0.00 0.00 0.00 5.69
121 122 6.809196 TGAAATATGTTGTAAAATGTTCCCGC 59.191 34.615 0.00 0.00 0.00 6.13
122 123 8.749841 TTGAAATATGTTGTAAAATGTTCCCG 57.250 30.769 0.00 0.00 0.00 5.14
278 279 9.142515 TGCAAACATACATGAGAATTTTCATTC 57.857 29.630 8.69 0.00 39.45 2.67
279 280 9.661563 ATGCAAACATACATGAGAATTTTCATT 57.338 25.926 8.69 4.38 33.32 2.57
285 286 9.961265 CTCAATATGCAAACATACATGAGAATT 57.039 29.630 17.50 0.00 46.64 2.17
289 290 8.780249 TCATCTCAATATGCAAACATACATGAG 58.220 33.333 16.84 16.84 45.97 2.90
290 291 8.680039 TCATCTCAATATGCAAACATACATGA 57.320 30.769 0.00 0.00 41.50 3.07
291 292 8.565416 ACTCATCTCAATATGCAAACATACATG 58.435 33.333 0.00 0.00 41.50 3.21
292 293 8.687292 ACTCATCTCAATATGCAAACATACAT 57.313 30.769 0.00 0.00 41.50 2.29
293 294 8.510243 AACTCATCTCAATATGCAAACATACA 57.490 30.769 0.00 0.00 41.50 2.29
294 295 9.793252 AAAACTCATCTCAATATGCAAACATAC 57.207 29.630 0.00 0.00 41.50 2.39
319 320 5.635417 TCATCATAACATGCACGGAAAAA 57.365 34.783 0.00 0.00 0.00 1.94
320 321 5.182950 ACTTCATCATAACATGCACGGAAAA 59.817 36.000 0.00 0.00 0.00 2.29
321 322 4.699735 ACTTCATCATAACATGCACGGAAA 59.300 37.500 0.00 0.00 0.00 3.13
322 323 4.094739 CACTTCATCATAACATGCACGGAA 59.905 41.667 0.00 0.00 0.00 4.30
323 324 3.622612 CACTTCATCATAACATGCACGGA 59.377 43.478 0.00 0.00 0.00 4.69
324 325 3.242837 CCACTTCATCATAACATGCACGG 60.243 47.826 0.00 0.00 0.00 4.94
325 326 3.789791 GCCACTTCATCATAACATGCACG 60.790 47.826 0.00 0.00 0.00 5.34
326 327 3.129113 TGCCACTTCATCATAACATGCAC 59.871 43.478 0.00 0.00 0.00 4.57
327 328 3.354467 TGCCACTTCATCATAACATGCA 58.646 40.909 0.00 0.00 0.00 3.96
328 329 4.295870 CATGCCACTTCATCATAACATGC 58.704 43.478 0.00 0.00 0.00 4.06
329 330 4.037565 AGCATGCCACTTCATCATAACATG 59.962 41.667 15.66 0.00 37.35 3.21
330 331 4.212716 AGCATGCCACTTCATCATAACAT 58.787 39.130 15.66 0.00 0.00 2.71
331 332 3.623703 AGCATGCCACTTCATCATAACA 58.376 40.909 15.66 0.00 0.00 2.41
332 333 4.357142 CAAGCATGCCACTTCATCATAAC 58.643 43.478 15.66 0.00 0.00 1.89
333 334 4.642445 CAAGCATGCCACTTCATCATAA 57.358 40.909 15.66 0.00 0.00 1.90
348 349 5.472478 CCATAGTATCTCAACATGCAAGCAT 59.528 40.000 0.86 0.86 37.08 3.79
349 350 4.818005 CCATAGTATCTCAACATGCAAGCA 59.182 41.667 0.00 0.00 0.00 3.91
350 351 4.818546 ACCATAGTATCTCAACATGCAAGC 59.181 41.667 0.00 0.00 0.00 4.01
351 352 7.170489 CACTACCATAGTATCTCAACATGCAAG 59.830 40.741 0.00 0.00 37.23 4.01
352 353 6.986231 CACTACCATAGTATCTCAACATGCAA 59.014 38.462 0.00 0.00 37.23 4.08
353 354 6.323739 TCACTACCATAGTATCTCAACATGCA 59.676 38.462 0.00 0.00 37.23 3.96
354 355 6.749139 TCACTACCATAGTATCTCAACATGC 58.251 40.000 0.00 0.00 37.23 4.06
355 356 7.374272 CCTCACTACCATAGTATCTCAACATG 58.626 42.308 0.00 0.00 37.23 3.21
356 357 6.495181 CCCTCACTACCATAGTATCTCAACAT 59.505 42.308 0.00 0.00 37.23 2.71
357 358 5.833667 CCCTCACTACCATAGTATCTCAACA 59.166 44.000 0.00 0.00 37.23 3.33
358 359 5.834204 ACCCTCACTACCATAGTATCTCAAC 59.166 44.000 0.00 0.00 37.23 3.18
359 360 5.833667 CACCCTCACTACCATAGTATCTCAA 59.166 44.000 0.00 0.00 37.23 3.02
360 361 5.386060 CACCCTCACTACCATAGTATCTCA 58.614 45.833 0.00 0.00 37.23 3.27
361 362 4.767928 CCACCCTCACTACCATAGTATCTC 59.232 50.000 0.00 0.00 37.23 2.75
362 363 4.419200 TCCACCCTCACTACCATAGTATCT 59.581 45.833 0.00 0.00 37.23 1.98
363 364 4.737578 TCCACCCTCACTACCATAGTATC 58.262 47.826 0.00 0.00 37.23 2.24
364 365 4.827036 TCCACCCTCACTACCATAGTAT 57.173 45.455 0.00 0.00 37.23 2.12
365 366 4.419200 AGATCCACCCTCACTACCATAGTA 59.581 45.833 0.00 0.00 37.23 1.82
366 367 3.207777 AGATCCACCCTCACTACCATAGT 59.792 47.826 0.00 0.00 40.28 2.12
367 368 3.850752 AGATCCACCCTCACTACCATAG 58.149 50.000 0.00 0.00 0.00 2.23
368 369 3.993658 AGATCCACCCTCACTACCATA 57.006 47.619 0.00 0.00 0.00 2.74
369 370 2.877154 AGATCCACCCTCACTACCAT 57.123 50.000 0.00 0.00 0.00 3.55
370 371 2.642171 AAGATCCACCCTCACTACCA 57.358 50.000 0.00 0.00 0.00 3.25
371 372 3.519913 AGAAAAGATCCACCCTCACTACC 59.480 47.826 0.00 0.00 0.00 3.18
372 373 4.223032 TGAGAAAAGATCCACCCTCACTAC 59.777 45.833 0.00 0.00 0.00 2.73
373 374 4.425772 TGAGAAAAGATCCACCCTCACTA 58.574 43.478 0.00 0.00 0.00 2.74
374 375 3.251484 TGAGAAAAGATCCACCCTCACT 58.749 45.455 0.00 0.00 0.00 3.41
375 376 3.703001 TGAGAAAAGATCCACCCTCAC 57.297 47.619 0.00 0.00 0.00 3.51
376 377 3.623203 GCATGAGAAAAGATCCACCCTCA 60.623 47.826 0.00 7.60 35.48 3.86
377 378 2.948315 GCATGAGAAAAGATCCACCCTC 59.052 50.000 0.00 0.00 0.00 4.30
378 379 2.309755 TGCATGAGAAAAGATCCACCCT 59.690 45.455 0.00 0.00 0.00 4.34
379 380 2.726821 TGCATGAGAAAAGATCCACCC 58.273 47.619 0.00 0.00 0.00 4.61
380 381 3.698040 ACATGCATGAGAAAAGATCCACC 59.302 43.478 32.75 0.00 0.00 4.61
381 382 4.978083 ACATGCATGAGAAAAGATCCAC 57.022 40.909 32.75 0.00 0.00 4.02
382 383 4.768448 ACAACATGCATGAGAAAAGATCCA 59.232 37.500 32.75 0.00 0.00 3.41
383 384 5.100259 CACAACATGCATGAGAAAAGATCC 58.900 41.667 32.75 0.00 0.00 3.36
384 385 5.946298 TCACAACATGCATGAGAAAAGATC 58.054 37.500 32.75 0.00 0.00 2.75
385 386 5.708697 TCTCACAACATGCATGAGAAAAGAT 59.291 36.000 32.75 4.93 44.49 2.40
386 387 5.065235 TCTCACAACATGCATGAGAAAAGA 58.935 37.500 32.75 22.84 44.49 2.52
387 388 5.366829 TCTCACAACATGCATGAGAAAAG 57.633 39.130 32.75 21.18 44.49 2.27
392 393 4.335594 ACATCATCTCACAACATGCATGAG 59.664 41.667 32.75 24.30 41.06 2.90
393 394 4.095782 CACATCATCTCACAACATGCATGA 59.904 41.667 32.75 10.35 33.95 3.07
394 395 4.351192 CACATCATCTCACAACATGCATG 58.649 43.478 25.09 25.09 0.00 4.06
395 396 3.380320 CCACATCATCTCACAACATGCAT 59.620 43.478 0.00 0.00 0.00 3.96
396 397 2.750712 CCACATCATCTCACAACATGCA 59.249 45.455 0.00 0.00 0.00 3.96
397 398 2.479049 GCCACATCATCTCACAACATGC 60.479 50.000 0.00 0.00 0.00 4.06
398 399 2.750712 TGCCACATCATCTCACAACATG 59.249 45.455 0.00 0.00 0.00 3.21
399 400 3.076079 TGCCACATCATCTCACAACAT 57.924 42.857 0.00 0.00 0.00 2.71
400 401 2.565046 TGCCACATCATCTCACAACA 57.435 45.000 0.00 0.00 0.00 3.33
401 402 2.479049 GCATGCCACATCATCTCACAAC 60.479 50.000 6.36 0.00 0.00 3.32
402 403 1.746787 GCATGCCACATCATCTCACAA 59.253 47.619 6.36 0.00 0.00 3.33
403 404 1.064979 AGCATGCCACATCATCTCACA 60.065 47.619 15.66 0.00 0.00 3.58
404 405 1.676746 AGCATGCCACATCATCTCAC 58.323 50.000 15.66 0.00 0.00 3.51
405 406 2.021457 CAAGCATGCCACATCATCTCA 58.979 47.619 15.66 0.00 0.00 3.27
406 407 2.776312 CAAGCATGCCACATCATCTC 57.224 50.000 15.66 0.00 0.00 2.75
419 420 6.125029 ACTATTTCTCCTAACATGCAAGCAT 58.875 36.000 0.86 0.86 37.08 3.79
420 421 5.500234 ACTATTTCTCCTAACATGCAAGCA 58.500 37.500 0.00 0.00 0.00 3.91
421 422 6.442513 AACTATTTCTCCTAACATGCAAGC 57.557 37.500 0.00 0.00 0.00 4.01
422 423 9.941664 CATTAACTATTTCTCCTAACATGCAAG 57.058 33.333 0.00 0.00 0.00 4.01
423 424 8.902806 CCATTAACTATTTCTCCTAACATGCAA 58.097 33.333 0.00 0.00 0.00 4.08
424 425 7.502226 CCCATTAACTATTTCTCCTAACATGCA 59.498 37.037 0.00 0.00 0.00 3.96
425 426 7.040409 CCCCATTAACTATTTCTCCTAACATGC 60.040 40.741 0.00 0.00 0.00 4.06
426 427 7.448469 CCCCCATTAACTATTTCTCCTAACATG 59.552 40.741 0.00 0.00 0.00 3.21
427 428 7.526918 CCCCCATTAACTATTTCTCCTAACAT 58.473 38.462 0.00 0.00 0.00 2.71
428 429 6.636336 GCCCCCATTAACTATTTCTCCTAACA 60.636 42.308 0.00 0.00 0.00 2.41
429 430 5.768662 GCCCCCATTAACTATTTCTCCTAAC 59.231 44.000 0.00 0.00 0.00 2.34
430 431 5.674958 AGCCCCCATTAACTATTTCTCCTAA 59.325 40.000 0.00 0.00 0.00 2.69
431 432 5.232347 AGCCCCCATTAACTATTTCTCCTA 58.768 41.667 0.00 0.00 0.00 2.94
432 433 4.055094 AGCCCCCATTAACTATTTCTCCT 58.945 43.478 0.00 0.00 0.00 3.69
433 434 4.455070 AGCCCCCATTAACTATTTCTCC 57.545 45.455 0.00 0.00 0.00 3.71
434 435 5.004448 GCTAGCCCCCATTAACTATTTCTC 58.996 45.833 2.29 0.00 0.00 2.87
435 436 4.665483 AGCTAGCCCCCATTAACTATTTCT 59.335 41.667 12.13 0.00 0.00 2.52
436 437 4.986783 AGCTAGCCCCCATTAACTATTTC 58.013 43.478 12.13 0.00 0.00 2.17
437 438 6.720217 ATAGCTAGCCCCCATTAACTATTT 57.280 37.500 12.13 0.00 0.00 1.40
438 439 6.720217 AATAGCTAGCCCCCATTAACTATT 57.280 37.500 12.13 2.01 0.00 1.73
439 440 6.720217 AAATAGCTAGCCCCCATTAACTAT 57.280 37.500 12.13 0.00 0.00 2.12
440 441 7.020629 TCTAAATAGCTAGCCCCCATTAACTA 58.979 38.462 12.13 0.00 0.00 2.24
441 442 5.850028 TCTAAATAGCTAGCCCCCATTAACT 59.150 40.000 12.13 0.00 0.00 2.24
442 443 6.123045 TCTAAATAGCTAGCCCCCATTAAC 57.877 41.667 12.13 0.00 0.00 2.01
443 444 6.970165 ATCTAAATAGCTAGCCCCCATTAA 57.030 37.500 12.13 0.00 0.00 1.40
444 445 9.381038 CTATATCTAAATAGCTAGCCCCCATTA 57.619 37.037 12.13 3.75 0.00 1.90
445 446 8.074363 TCTATATCTAAATAGCTAGCCCCCATT 58.926 37.037 12.13 3.43 30.79 3.16
446 447 7.605651 TCTATATCTAAATAGCTAGCCCCCAT 58.394 38.462 12.13 0.00 30.79 4.00
447 448 6.993408 TCTATATCTAAATAGCTAGCCCCCA 58.007 40.000 12.13 0.00 30.79 4.96
448 449 7.785506 TCTTCTATATCTAAATAGCTAGCCCCC 59.214 40.741 12.13 0.00 30.79 5.40
449 450 8.770010 TCTTCTATATCTAAATAGCTAGCCCC 57.230 38.462 12.13 0.00 30.79 5.80
492 493 1.864082 CCATTTTTGCGCCTCGTTTTT 59.136 42.857 4.18 0.00 0.00 1.94
493 494 1.202475 ACCATTTTTGCGCCTCGTTTT 60.202 42.857 4.18 0.00 0.00 2.43
494 495 0.387565 ACCATTTTTGCGCCTCGTTT 59.612 45.000 4.18 0.00 0.00 3.60
495 496 1.240256 TACCATTTTTGCGCCTCGTT 58.760 45.000 4.18 0.00 0.00 3.85
496 497 1.068816 GTTACCATTTTTGCGCCTCGT 60.069 47.619 4.18 0.00 0.00 4.18
497 498 1.199097 AGTTACCATTTTTGCGCCTCG 59.801 47.619 4.18 0.00 0.00 4.63
498 499 3.427098 GGTAGTTACCATTTTTGCGCCTC 60.427 47.826 4.18 0.00 45.73 4.70
499 500 2.490509 GGTAGTTACCATTTTTGCGCCT 59.509 45.455 4.18 0.00 45.73 5.52
500 501 2.729778 CGGTAGTTACCATTTTTGCGCC 60.730 50.000 4.18 0.00 46.80 6.53
501 502 2.511879 CGGTAGTTACCATTTTTGCGC 58.488 47.619 0.00 0.00 46.80 6.09
502 503 2.511879 GCGGTAGTTACCATTTTTGCG 58.488 47.619 8.91 0.00 46.80 4.85
503 504 2.229302 TGGCGGTAGTTACCATTTTTGC 59.771 45.455 8.91 2.80 46.80 3.68
504 505 3.668491 CGTGGCGGTAGTTACCATTTTTG 60.668 47.826 8.91 0.00 46.80 2.44
505 506 2.485038 CGTGGCGGTAGTTACCATTTTT 59.515 45.455 8.91 0.00 46.80 1.94
506 507 2.078392 CGTGGCGGTAGTTACCATTTT 58.922 47.619 8.91 0.00 46.80 1.82
507 508 1.002315 ACGTGGCGGTAGTTACCATTT 59.998 47.619 8.91 0.00 46.80 2.32
508 509 0.609662 ACGTGGCGGTAGTTACCATT 59.390 50.000 8.91 0.00 46.80 3.16
509 510 0.174162 GACGTGGCGGTAGTTACCAT 59.826 55.000 8.91 0.00 46.80 3.55
510 511 0.895100 AGACGTGGCGGTAGTTACCA 60.895 55.000 8.91 0.00 46.80 3.25
511 512 0.179153 GAGACGTGGCGGTAGTTACC 60.179 60.000 0.00 0.00 42.98 2.85
549 550 1.971167 GCCCCACGACAAATGCTGA 60.971 57.895 0.00 0.00 0.00 4.26
634 635 6.380274 TCAAACGGGTAGTATGATCTCTTCTT 59.620 38.462 0.00 0.00 0.00 2.52
635 636 5.892119 TCAAACGGGTAGTATGATCTCTTCT 59.108 40.000 0.00 0.00 0.00 2.85
636 637 5.978322 GTCAAACGGGTAGTATGATCTCTTC 59.022 44.000 0.00 0.00 0.00 2.87
735 743 7.050377 ACCAGATTCATATGTGAGTGGTAAAG 58.950 38.462 16.65 0.00 40.31 1.85
747 755 4.096190 AGCAAGGGACCAGATTCATATG 57.904 45.455 0.00 0.00 0.00 1.78
750 758 4.467769 CAATAGCAAGGGACCAGATTCAT 58.532 43.478 0.00 0.00 0.00 2.57
753 761 2.852449 TCCAATAGCAAGGGACCAGATT 59.148 45.455 0.00 0.00 0.00 2.40
766 774 4.276926 CCTAGTTTTGCCAGATCCAATAGC 59.723 45.833 0.00 0.00 0.00 2.97
768 776 5.708736 TCCTAGTTTTGCCAGATCCAATA 57.291 39.130 0.00 0.00 0.00 1.90
809 817 1.181098 ACATGGCAGCCCAAACTCAC 61.181 55.000 9.64 0.00 46.14 3.51
822 830 4.833390 AGAAGAGTAGGTAAACACATGGC 58.167 43.478 0.00 0.00 0.00 4.40
868 882 4.202284 TGTCTTTGTACCCTACTTGTCACC 60.202 45.833 0.00 0.00 0.00 4.02
889 903 8.865090 CAGAGTTGGATCTTATATAGAGGTTGT 58.135 37.037 0.00 0.00 36.02 3.32
1211 1229 2.158711 CCACTGGGTGTCTGCATGATAT 60.159 50.000 0.00 0.00 0.00 1.63
1212 1230 1.210234 CCACTGGGTGTCTGCATGATA 59.790 52.381 0.00 0.00 0.00 2.15
1213 1231 0.034767 CCACTGGGTGTCTGCATGAT 60.035 55.000 0.00 0.00 0.00 2.45
1214 1232 1.376086 CCACTGGGTGTCTGCATGA 59.624 57.895 0.00 0.00 0.00 3.07
1226 1244 0.811616 GCATCTAACTCCGCCACTGG 60.812 60.000 0.00 0.00 0.00 4.00
1227 1245 0.108186 TGCATCTAACTCCGCCACTG 60.108 55.000 0.00 0.00 0.00 3.66
1228 1246 0.176680 CTGCATCTAACTCCGCCACT 59.823 55.000 0.00 0.00 0.00 4.00
1229 1247 0.175760 TCTGCATCTAACTCCGCCAC 59.824 55.000 0.00 0.00 0.00 5.01
1230 1248 1.123077 ATCTGCATCTAACTCCGCCA 58.877 50.000 0.00 0.00 0.00 5.69
1231 1249 2.246719 AATCTGCATCTAACTCCGCC 57.753 50.000 0.00 0.00 0.00 6.13
1232 1250 2.726760 CGTAATCTGCATCTAACTCCGC 59.273 50.000 0.00 0.00 0.00 5.54
1234 1252 3.060602 GGCGTAATCTGCATCTAACTCC 58.939 50.000 0.00 0.00 0.00 3.85
1235 1253 3.983741 AGGCGTAATCTGCATCTAACTC 58.016 45.455 0.00 0.00 0.00 3.01
1236 1254 4.021894 CCTAGGCGTAATCTGCATCTAACT 60.022 45.833 0.00 0.00 0.00 2.24
1237 1255 4.238514 CCTAGGCGTAATCTGCATCTAAC 58.761 47.826 0.00 0.00 0.00 2.34
1239 1257 2.826128 CCCTAGGCGTAATCTGCATCTA 59.174 50.000 2.05 0.00 0.00 1.98
1240 1258 1.620819 CCCTAGGCGTAATCTGCATCT 59.379 52.381 2.05 0.00 0.00 2.90
1241 1259 1.941668 GCCCTAGGCGTAATCTGCATC 60.942 57.143 2.05 0.00 39.62 3.91
1242 1260 0.035458 GCCCTAGGCGTAATCTGCAT 59.965 55.000 2.05 0.00 39.62 3.96
1243 1261 1.445942 GCCCTAGGCGTAATCTGCA 59.554 57.895 2.05 0.00 39.62 4.41
1244 1262 4.363034 GCCCTAGGCGTAATCTGC 57.637 61.111 2.05 0.00 39.62 4.26
1254 1272 3.580458 ACTCAATATAGCACAGCCCTAGG 59.420 47.826 0.06 0.06 0.00 3.02
1255 1273 4.281941 TCACTCAATATAGCACAGCCCTAG 59.718 45.833 0.00 0.00 0.00 3.02
1256 1274 4.223144 TCACTCAATATAGCACAGCCCTA 58.777 43.478 0.00 0.00 0.00 3.53
1257 1275 3.041211 TCACTCAATATAGCACAGCCCT 58.959 45.455 0.00 0.00 0.00 5.19
1258 1276 3.475566 TCACTCAATATAGCACAGCCC 57.524 47.619 0.00 0.00 0.00 5.19
1259 1277 6.708054 AGTTTATCACTCAATATAGCACAGCC 59.292 38.462 0.00 0.00 0.00 4.85
1260 1278 7.721286 AGTTTATCACTCAATATAGCACAGC 57.279 36.000 0.00 0.00 0.00 4.40
1261 1279 9.539825 AGAAGTTTATCACTCAATATAGCACAG 57.460 33.333 0.00 0.00 32.94 3.66
1280 1298 9.578439 GCAAAGCATAGAAAATCATAGAAGTTT 57.422 29.630 0.00 0.00 0.00 2.66
1281 1299 8.742777 TGCAAAGCATAGAAAATCATAGAAGTT 58.257 29.630 0.00 0.00 31.71 2.66
1282 1300 8.284945 TGCAAAGCATAGAAAATCATAGAAGT 57.715 30.769 0.00 0.00 31.71 3.01
1323 1341 3.582647 CCCCAGGCCTAGAAACAATTTTT 59.417 43.478 3.98 0.00 0.00 1.94
1324 1342 3.173151 CCCCAGGCCTAGAAACAATTTT 58.827 45.455 3.98 0.00 0.00 1.82
1325 1343 2.820178 CCCCAGGCCTAGAAACAATTT 58.180 47.619 3.98 0.00 0.00 1.82
1326 1344 1.619704 GCCCCAGGCCTAGAAACAATT 60.620 52.381 3.98 0.00 44.06 2.32
1327 1345 0.033109 GCCCCAGGCCTAGAAACAAT 60.033 55.000 3.98 0.00 44.06 2.71
1328 1346 1.382629 GCCCCAGGCCTAGAAACAA 59.617 57.895 3.98 0.00 44.06 2.83
1329 1347 3.087065 GCCCCAGGCCTAGAAACA 58.913 61.111 3.98 0.00 44.06 2.83
1345 1363 1.971357 TGGAGCAGTTAGGGCTATAGC 59.029 52.381 16.78 16.78 42.78 2.97
1346 1364 2.564947 CCTGGAGCAGTTAGGGCTATAG 59.435 54.545 0.00 0.00 42.78 1.31
1347 1365 2.609747 CCTGGAGCAGTTAGGGCTATA 58.390 52.381 0.00 0.00 42.78 1.31
1348 1366 1.428869 CCTGGAGCAGTTAGGGCTAT 58.571 55.000 0.00 0.00 42.78 2.97
1349 1367 1.338136 GCCTGGAGCAGTTAGGGCTA 61.338 60.000 0.00 0.00 42.78 3.93
1350 1368 2.674220 GCCTGGAGCAGTTAGGGCT 61.674 63.158 0.00 0.00 46.07 5.19
1351 1369 2.124529 GCCTGGAGCAGTTAGGGC 60.125 66.667 0.00 0.00 42.97 5.19
1352 1370 2.187946 CGCCTGGAGCAGTTAGGG 59.812 66.667 0.00 0.00 44.04 3.53
1353 1371 1.448540 CACGCCTGGAGCAGTTAGG 60.449 63.158 0.00 0.00 44.04 2.69
1354 1372 0.737715 GACACGCCTGGAGCAGTTAG 60.738 60.000 0.00 0.00 44.04 2.34
1355 1373 1.185618 AGACACGCCTGGAGCAGTTA 61.186 55.000 0.00 0.00 44.04 2.24
1356 1374 2.031163 GACACGCCTGGAGCAGTT 59.969 61.111 0.00 0.00 44.04 3.16
1357 1375 2.919856 AGACACGCCTGGAGCAGT 60.920 61.111 0.00 0.00 44.04 4.40
1358 1376 2.125753 GAGACACGCCTGGAGCAG 60.126 66.667 0.00 0.00 44.04 4.24
1359 1377 3.695606 GGAGACACGCCTGGAGCA 61.696 66.667 0.00 0.00 44.04 4.26
1360 1378 4.803426 CGGAGACACGCCTGGAGC 62.803 72.222 0.00 0.00 38.52 4.70
1370 1388 5.694229 GTACTACATACAGTGGCGGAGACA 61.694 50.000 0.00 0.00 37.08 3.41
1371 1389 1.749634 ACTACATACAGTGGCGGAGAC 59.250 52.381 0.00 0.00 30.71 3.36
1372 1390 2.139323 ACTACATACAGTGGCGGAGA 57.861 50.000 0.00 0.00 30.71 3.71
1373 1391 2.686405 TGTACTACATACAGTGGCGGAG 59.314 50.000 0.00 0.00 38.95 4.63
1374 1392 2.725637 TGTACTACATACAGTGGCGGA 58.274 47.619 0.00 0.00 38.95 5.54
1408 1426 1.491668 TTCAGAGGGCGCATACCTAA 58.508 50.000 10.83 0.00 38.79 2.69
1595 1625 3.303229 GTGTAACACAAACTTGCAAGTGC 59.697 43.478 31.73 11.97 36.52 4.40
1613 1643 3.266282 CACGTCACAGTGCAGTGTA 57.734 52.632 26.21 12.40 40.37 2.90
1614 1644 4.108902 CACGTCACAGTGCAGTGT 57.891 55.556 21.61 21.61 40.37 3.55
1646 1685 3.558033 ACAAGTCCATCATGCATGCATA 58.442 40.909 31.73 19.92 34.91 3.14
1657 1696 0.810031 ACCGCGCATACAAGTCCATC 60.810 55.000 8.75 0.00 0.00 3.51
1748 1788 1.751924 CTTCTCCTCGTAGAACCCCAG 59.248 57.143 0.00 0.00 34.09 4.45
1846 1886 1.732259 GGGTGCATGTTGTCGAAGTAG 59.268 52.381 0.00 0.00 0.00 2.57
1939 1979 5.474825 GTGAAGGAACAAAGAGAGAGGTAG 58.525 45.833 0.00 0.00 0.00 3.18
1945 1985 2.802816 CACGGTGAAGGAACAAAGAGAG 59.197 50.000 0.74 0.00 0.00 3.20
1960 2000 0.109086 AGAATCGCTGAGTCACGGTG 60.109 55.000 0.56 0.56 36.78 4.94
2060 2100 1.865340 GAAGTGGACGACCTTGTTGAC 59.135 52.381 5.33 0.00 37.04 3.18
2197 2237 0.106894 GGCTGCATGAGTAGGTACCC 59.893 60.000 8.74 0.00 0.00 3.69
2216 2256 4.083110 AGCCAAAATCACGTTGAATCTCAG 60.083 41.667 0.00 0.00 0.00 3.35
2230 2270 7.894376 TGAATCAGATTTTCAAGCCAAAATC 57.106 32.000 14.19 14.19 46.58 2.17
2304 2344 4.252902 CGTTTATAAAGATGTCGTGCGTG 58.747 43.478 0.00 0.00 0.00 5.34
2397 2437 4.012374 AGCATTCGTCAATTGTCCTGAAT 58.988 39.130 5.13 8.06 0.00 2.57
2496 2539 4.876107 CACGTAGGATAAACTGCCAATCTT 59.124 41.667 0.00 0.00 0.00 2.40
2528 2571 2.266554 GTTGCACTCTTCTCGATCTGG 58.733 52.381 0.00 0.00 0.00 3.86
2537 2580 1.896660 TTGCCGGGTTGCACTCTTC 60.897 57.895 2.18 0.00 41.88 2.87
2794 2837 0.246635 AAGGTCAACGTCTCCCATCG 59.753 55.000 0.00 0.00 0.00 3.84
2874 2917 3.848975 AGACTGATTGAAGGTGGGAAGAT 59.151 43.478 0.00 0.00 0.00 2.40
3109 3177 6.723298 TGCCTCTAATTTTTCCTTCAACAA 57.277 33.333 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.