Multiple sequence alignment - TraesCS4A01G085800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G085800 chr4A 100.000 3743 0 0 1 3743 90386985 90383243 0.000000e+00 6913.0
1 TraesCS4A01G085800 chr4A 91.346 104 6 3 1732 1833 650070063 650069961 5.040000e-29 139.0
2 TraesCS4A01G085800 chr4A 91.837 98 6 2 1732 1827 623140973 623140876 6.520000e-28 135.0
3 TraesCS4A01G085800 chr4A 92.958 71 4 1 2782 2851 82434406 82434336 6.610000e-18 102.0
4 TraesCS4A01G085800 chr3B 99.481 1733 9 0 1 1733 124769161 124767429 0.000000e+00 3151.0
5 TraesCS4A01G085800 chr3B 99.611 1029 4 0 1806 2834 124767446 124766418 0.000000e+00 1879.0
6 TraesCS4A01G085800 chr3B 95.506 89 3 1 1732 1819 175764224 175764136 1.400000e-29 141.0
7 TraesCS4A01G085800 chr3B 96.721 61 0 2 2782 2840 756616137 756616077 2.380000e-17 100.0
8 TraesCS4A01G085800 chr5B 97.411 1738 35 7 1 1733 706039678 706041410 0.000000e+00 2952.0
9 TraesCS4A01G085800 chr5B 97.551 245 4 2 2538 2781 706041775 706042018 5.780000e-113 418.0
10 TraesCS4A01G085800 chr5B 98.723 235 2 1 1806 2040 706041393 706041626 2.080000e-112 416.0
11 TraesCS4A01G085800 chr5B 91.626 203 17 0 2833 3035 18585650 18585852 7.920000e-72 281.0
12 TraesCS4A01G085800 chr2A 97.467 1737 29 6 1 1733 492833362 492835087 0.000000e+00 2950.0
13 TraesCS4A01G085800 chr2A 97.785 632 12 2 2040 2669 492835221 492835852 0.000000e+00 1088.0
14 TraesCS4A01G085800 chr2A 98.298 235 4 0 1806 2040 492835070 492835304 2.690000e-111 412.0
15 TraesCS4A01G085800 chr2A 96.596 235 8 0 1806 2040 767442199 767442433 1.260000e-104 390.0
16 TraesCS4A01G085800 chr2A 90.650 246 12 2 2452 2686 43446651 43446896 2.170000e-82 316.0
17 TraesCS4A01G085800 chr2A 93.069 202 13 1 2833 3034 27484020 27484220 1.020000e-75 294.0
18 TraesCS4A01G085800 chr2A 92.553 94 7 0 1732 1825 499902111 499902018 6.520000e-28 135.0
19 TraesCS4A01G085800 chr2A 83.333 102 16 1 3573 3674 712202539 712202639 3.980000e-15 93.5
20 TraesCS4A01G085800 chr4B 93.288 1758 91 10 1 1733 221191468 221193223 0.000000e+00 2567.0
21 TraesCS4A01G085800 chr4B 95.839 1538 44 11 200 1733 243183352 243181831 0.000000e+00 2468.0
22 TraesCS4A01G085800 chr4B 95.940 1478 48 5 260 1733 361733687 361732218 0.000000e+00 2386.0
23 TraesCS4A01G085800 chr4B 97.174 743 16 5 2040 2781 361732084 361731346 0.000000e+00 1251.0
24 TraesCS4A01G085800 chr4B 96.644 745 21 4 2038 2781 243181735 243180994 0.000000e+00 1234.0
25 TraesCS4A01G085800 chr4B 91.441 444 37 1 106 548 564156298 564156741 3.200000e-170 608.0
26 TraesCS4A01G085800 chr4B 96.970 264 5 3 3 265 361746933 361746672 1.230000e-119 440.0
27 TraesCS4A01G085800 chr4B 97.447 235 5 1 1806 2040 361732235 361732002 2.090000e-107 399.0
28 TraesCS4A01G085800 chr4B 98.624 218 2 1 1 217 243183929 243183712 5.860000e-103 385.0
29 TraesCS4A01G085800 chr4B 94.388 196 11 0 2836 3031 545232694 545232889 6.080000e-78 302.0
30 TraesCS4A01G085800 chr1B 92.308 1417 70 11 356 1733 91886723 91885307 0.000000e+00 1977.0
31 TraesCS4A01G085800 chr1B 95.890 365 15 0 1 365 91887497 91887133 3.220000e-165 592.0
32 TraesCS4A01G085800 chr1B 91.057 246 11 2 2452 2686 95323480 95323725 4.660000e-84 322.0
33 TraesCS4A01G085800 chr1B 86.154 195 25 2 2851 3044 188462905 188463098 3.790000e-50 209.0
34 TraesCS4A01G085800 chr5D 94.545 1210 45 7 545 1733 61458853 61460062 0.000000e+00 1849.0
35 TraesCS4A01G085800 chr5D 93.651 756 35 4 2038 2781 61460194 61460948 0.000000e+00 1118.0
36 TraesCS4A01G085800 chr6D 94.527 1206 48 7 545 1733 352345989 352347193 0.000000e+00 1845.0
37 TraesCS4A01G085800 chr6D 93.929 1219 44 7 545 1733 59751320 59750102 0.000000e+00 1814.0
38 TraesCS4A01G085800 chr6D 93.426 1004 39 4 757 1733 173910678 173911681 0.000000e+00 1463.0
39 TraesCS4A01G085800 chr6D 94.180 756 32 4 2038 2781 263996692 263995937 0.000000e+00 1142.0
40 TraesCS4A01G085800 chr6D 93.923 757 32 5 2038 2781 59749970 59749215 0.000000e+00 1131.0
41 TraesCS4A01G085800 chr6D 97.021 235 7 0 1806 2040 263996841 263996607 2.710000e-106 396.0
42 TraesCS4A01G085800 chr6D 80.769 182 23 4 3572 3742 441332143 441332323 8.440000e-27 132.0
43 TraesCS4A01G085800 chr2D 94.180 756 30 6 2038 2781 540175103 540175856 0.000000e+00 1140.0
44 TraesCS4A01G085800 chr2D 97.021 235 7 0 1806 2040 540174954 540175188 2.710000e-106 396.0
45 TraesCS4A01G085800 chr2D 94.472 199 11 0 2833 3031 26858815 26858617 1.310000e-79 307.0
46 TraesCS4A01G085800 chr7D 93.923 757 32 6 2038 2781 535314392 535313637 0.000000e+00 1131.0
47 TraesCS4A01G085800 chr7D 93.676 759 33 5 2038 2781 46097755 46096997 0.000000e+00 1122.0
48 TraesCS4A01G085800 chr7D 87.900 438 35 5 106 536 545213725 545214151 2.010000e-137 499.0
49 TraesCS4A01G085800 chr1D 94.043 554 29 4 1183 1733 47377844 47378396 0.000000e+00 837.0
50 TraesCS4A01G085800 chr1D 81.562 461 24 19 2429 2851 47378470 47378907 1.300000e-84 324.0
51 TraesCS4A01G085800 chr1D 92.079 202 16 0 2833 3034 69863372 69863573 6.120000e-73 285.0
52 TraesCS4A01G085800 chr7B 91.767 498 24 7 2297 2781 102757859 102757366 0.000000e+00 676.0
53 TraesCS4A01G085800 chr7B 94.054 185 11 0 2836 3020 523632862 523633046 7.920000e-72 281.0
54 TraesCS4A01G085800 chr7B 91.327 196 17 0 2836 3031 686013126 686013321 6.160000e-68 268.0
55 TraesCS4A01G085800 chr7B 87.805 82 9 1 2754 2834 468952577 468952496 1.110000e-15 95.3
56 TraesCS4A01G085800 chr6B 91.751 497 25 7 2297 2781 623359768 623359276 0.000000e+00 676.0
57 TraesCS4A01G085800 chr6B 95.455 88 3 1 1732 1819 28503722 28503636 5.040000e-29 139.0
58 TraesCS4A01G085800 chr6B 96.721 61 2 0 3147 3207 46532614 46532554 6.610000e-18 102.0
59 TraesCS4A01G085800 chr6B 81.967 122 16 3 3571 3691 666115498 666115614 8.560000e-17 99.0
60 TraesCS4A01G085800 chr4D 88.133 573 32 18 3198 3743 374103084 374103647 0.000000e+00 649.0
61 TraesCS4A01G085800 chr4D 90.027 371 35 1 178 548 451040632 451041000 2.620000e-131 479.0
62 TraesCS4A01G085800 chr4D 94.975 199 10 0 2836 3034 40411946 40411748 2.810000e-81 313.0
63 TraesCS4A01G085800 chr3D 92.117 444 34 1 106 548 562561498 562561941 3.170000e-175 625.0
64 TraesCS4A01G085800 chr3D 92.405 395 29 1 106 500 266653281 266653674 2.520000e-156 562.0
65 TraesCS4A01G085800 chr3D 94.975 199 10 0 2833 3031 41720383 41720581 2.810000e-81 313.0
66 TraesCS4A01G085800 chr3D 90.265 113 9 2 1 112 9444263 9444152 3.010000e-31 147.0
67 TraesCS4A01G085800 chr6A 96.596 235 8 0 1806 2040 51765375 51765141 1.260000e-104 390.0
68 TraesCS4A01G085800 chr6A 80.473 169 19 7 3587 3742 589089040 589089207 2.360000e-22 117.0
69 TraesCS4A01G085800 chr6A 86.239 109 11 4 3587 3692 589130155 589130262 8.500000e-22 115.0
70 TraesCS4A01G085800 chr6A 86.239 109 11 4 3587 3692 589323554 589323447 8.500000e-22 115.0
71 TraesCS4A01G085800 chr6A 83.333 108 16 2 3586 3692 589107874 589107980 8.560000e-17 99.0
72 TraesCS4A01G085800 chr6A 80.645 124 22 2 3587 3709 589220067 589219945 1.110000e-15 95.3
73 TraesCS4A01G085800 chr5A 96.596 235 8 0 1806 2040 629269725 629269959 1.260000e-104 390.0
74 TraesCS4A01G085800 chr5A 91.358 243 10 2 2455 2686 119055903 119055661 4.660000e-84 322.0
75 TraesCS4A01G085800 chr5A 92.079 101 5 3 1732 1829 297026797 297026897 5.040000e-29 139.0
76 TraesCS4A01G085800 chr7A 95.980 199 8 0 2833 3031 727626873 727626675 1.300000e-84 324.0
77 TraesCS4A01G085800 chr7A 95.000 200 10 0 2835 3034 620747580 620747779 7.800000e-82 315.0
78 TraesCS4A01G085800 chr7A 94.030 201 12 0 2833 3033 91410272 91410472 4.700000e-79 305.0
79 TraesCS4A01G085800 chr7A 96.591 88 3 0 1732 1819 715758524 715758437 3.010000e-31 147.0
80 TraesCS4A01G085800 chr3A 91.057 246 11 2 2452 2686 558985241 558985486 4.660000e-84 322.0
81 TraesCS4A01G085800 chr2B 94.565 92 3 2 1732 1821 782853403 782853494 1.400000e-29 141.0
82 TraesCS4A01G085800 chr2B 94.505 91 3 2 1732 1821 782977891 782977980 5.040000e-29 139.0
83 TraesCS4A01G085800 chrUn 85.714 63 7 2 3207 3269 60175818 60175878 8.680000e-07 65.8
84 TraesCS4A01G085800 chrUn 85.714 63 7 2 3207 3269 233395287 233395347 8.680000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G085800 chr4A 90383243 90386985 3742 True 6913.000000 6913 100.000000 1 3743 1 chr4A.!!$R2 3742
1 TraesCS4A01G085800 chr3B 124766418 124769161 2743 True 2515.000000 3151 99.546000 1 2834 2 chr3B.!!$R3 2833
2 TraesCS4A01G085800 chr5B 706039678 706042018 2340 False 1262.000000 2952 97.895000 1 2781 3 chr5B.!!$F2 2780
3 TraesCS4A01G085800 chr2A 492833362 492835852 2490 False 1483.333333 2950 97.850000 1 2669 3 chr2A.!!$F5 2668
4 TraesCS4A01G085800 chr4B 221191468 221193223 1755 False 2567.000000 2567 93.288000 1 1733 1 chr4B.!!$F1 1732
5 TraesCS4A01G085800 chr4B 243180994 243183929 2935 True 1362.333333 2468 97.035667 1 2781 3 chr4B.!!$R2 2780
6 TraesCS4A01G085800 chr4B 361731346 361733687 2341 True 1345.333333 2386 96.853667 260 2781 3 chr4B.!!$R3 2521
7 TraesCS4A01G085800 chr1B 91885307 91887497 2190 True 1284.500000 1977 94.099000 1 1733 2 chr1B.!!$R1 1732
8 TraesCS4A01G085800 chr5D 61458853 61460948 2095 False 1483.500000 1849 94.098000 545 2781 2 chr5D.!!$F1 2236
9 TraesCS4A01G085800 chr6D 352345989 352347193 1204 False 1845.000000 1845 94.527000 545 1733 1 chr6D.!!$F2 1188
10 TraesCS4A01G085800 chr6D 59749215 59751320 2105 True 1472.500000 1814 93.926000 545 2781 2 chr6D.!!$R1 2236
11 TraesCS4A01G085800 chr6D 173910678 173911681 1003 False 1463.000000 1463 93.426000 757 1733 1 chr6D.!!$F1 976
12 TraesCS4A01G085800 chr6D 263995937 263996841 904 True 769.000000 1142 95.600500 1806 2781 2 chr6D.!!$R2 975
13 TraesCS4A01G085800 chr2D 540174954 540175856 902 False 768.000000 1140 95.600500 1806 2781 2 chr2D.!!$F1 975
14 TraesCS4A01G085800 chr7D 535313637 535314392 755 True 1131.000000 1131 93.923000 2038 2781 1 chr7D.!!$R2 743
15 TraesCS4A01G085800 chr7D 46096997 46097755 758 True 1122.000000 1122 93.676000 2038 2781 1 chr7D.!!$R1 743
16 TraesCS4A01G085800 chr1D 47377844 47378907 1063 False 580.500000 837 87.802500 1183 2851 2 chr1D.!!$F2 1668
17 TraesCS4A01G085800 chr4D 374103084 374103647 563 False 649.000000 649 88.133000 3198 3743 1 chr4D.!!$F1 545

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1330 2162 2.745037 CCCTTCCGGTTCGTTCCA 59.255 61.111 0.0 0.0 0.0 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2846 3821 0.032267 GGATGCCCACGACTACTAGC 59.968 60.0 0.0 0.0 0.0 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1330 2162 2.745037 CCCTTCCGGTTCGTTCCA 59.255 61.111 0.00 0.00 0.00 3.53
1754 2602 3.828657 GACCTAAAGTGGTCGGACC 57.171 57.895 20.36 20.36 45.69 4.46
1755 2603 0.248565 GACCTAAAGTGGTCGGACCC 59.751 60.000 23.81 14.91 45.69 4.46
1756 2604 0.178912 ACCTAAAGTGGTCGGACCCT 60.179 55.000 23.81 16.82 37.50 4.34
1757 2605 0.981943 CCTAAAGTGGTCGGACCCTT 59.018 55.000 23.81 21.08 37.50 3.95
1758 2606 1.066358 CCTAAAGTGGTCGGACCCTTC 60.066 57.143 23.81 13.97 37.50 3.46
1759 2607 0.978907 TAAAGTGGTCGGACCCTTCC 59.021 55.000 23.81 9.51 37.50 3.46
1760 2608 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
1761 2609 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
1762 2610 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
1763 2611 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
1764 2612 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
1765 2613 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
1766 2614 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
1767 2615 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
1768 2616 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
1769 2617 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
1770 2618 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
1771 2619 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
1772 2620 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
1797 2645 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
1798 2646 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
1799 2647 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
1800 2648 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
1801 2649 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
1802 2650 1.788518 TACATGCACCAGGTTGCCCT 61.789 55.000 10.46 0.00 42.25 5.19
1804 2652 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
2007 2855 9.391006 TGTCTAATTCTTGATTTATGTGGTACC 57.609 33.333 4.43 4.43 0.00 3.34
2008 2856 9.391006 GTCTAATTCTTGATTTATGTGGTACCA 57.609 33.333 11.60 11.60 0.00 3.25
2011 2859 6.918892 TTCTTGATTTATGTGGTACCATCG 57.081 37.500 19.72 0.00 0.00 3.84
2012 2860 5.984725 TCTTGATTTATGTGGTACCATCGT 58.015 37.500 19.72 14.95 0.00 3.73
2013 2861 6.046593 TCTTGATTTATGTGGTACCATCGTC 58.953 40.000 19.72 5.50 0.00 4.20
2014 2862 5.607939 TGATTTATGTGGTACCATCGTCT 57.392 39.130 19.72 1.55 0.00 4.18
2015 2863 6.718522 TGATTTATGTGGTACCATCGTCTA 57.281 37.500 19.72 2.97 0.00 2.59
2016 2864 7.114866 TGATTTATGTGGTACCATCGTCTAA 57.885 36.000 19.72 8.53 0.00 2.10
2017 2865 7.557724 TGATTTATGTGGTACCATCGTCTAAA 58.442 34.615 19.72 16.13 0.00 1.85
2018 2866 8.041919 TGATTTATGTGGTACCATCGTCTAAAA 58.958 33.333 19.72 11.88 0.00 1.52
2019 2867 8.795842 ATTTATGTGGTACCATCGTCTAAAAA 57.204 30.769 19.72 10.44 0.00 1.94
2020 2868 8.795842 TTTATGTGGTACCATCGTCTAAAAAT 57.204 30.769 19.72 0.00 0.00 1.82
2021 2869 8.795842 TTATGTGGTACCATCGTCTAAAAATT 57.204 30.769 19.72 0.00 0.00 1.82
2022 2870 6.489127 TGTGGTACCATCGTCTAAAAATTG 57.511 37.500 19.72 0.00 0.00 2.32
2023 2871 5.413213 TGTGGTACCATCGTCTAAAAATTGG 59.587 40.000 19.72 0.00 0.00 3.16
2024 2872 5.413523 GTGGTACCATCGTCTAAAAATTGGT 59.586 40.000 19.72 0.00 40.42 3.67
2025 2873 5.644636 TGGTACCATCGTCTAAAAATTGGTC 59.355 40.000 11.60 0.00 38.39 4.02
2026 2874 5.065602 GGTACCATCGTCTAAAAATTGGTCC 59.934 44.000 7.15 0.00 38.39 4.46
2027 2875 4.918588 ACCATCGTCTAAAAATTGGTCCT 58.081 39.130 0.00 0.00 32.08 3.85
2028 2876 6.057321 ACCATCGTCTAAAAATTGGTCCTA 57.943 37.500 0.00 0.00 32.08 2.94
2029 2877 6.478129 ACCATCGTCTAAAAATTGGTCCTAA 58.522 36.000 0.00 0.00 32.08 2.69
2030 2878 6.943718 ACCATCGTCTAAAAATTGGTCCTAAA 59.056 34.615 0.00 0.00 32.08 1.85
2031 2879 7.120726 ACCATCGTCTAAAAATTGGTCCTAAAG 59.879 37.037 0.00 0.00 32.08 1.85
2032 2880 7.335924 CCATCGTCTAAAAATTGGTCCTAAAGA 59.664 37.037 0.00 0.00 0.00 2.52
2033 2881 8.893727 CATCGTCTAAAAATTGGTCCTAAAGAT 58.106 33.333 0.00 0.00 0.00 2.40
2035 2883 9.374838 TCGTCTAAAAATTGGTCCTAAAGATAC 57.625 33.333 0.00 0.00 0.00 2.24
2036 2884 9.158233 CGTCTAAAAATTGGTCCTAAAGATACA 57.842 33.333 0.00 0.00 0.00 2.29
2254 3187 0.897621 GCCAAGCTTGCCCTTGTTAT 59.102 50.000 21.43 0.00 40.40 1.89
2532 3496 2.567615 GAGGCTTGGAACTCTCCTTGTA 59.432 50.000 0.00 0.00 42.94 2.41
2834 3809 1.269102 CGCAACCGGGTCATCTAGTAG 60.269 57.143 6.32 0.00 0.00 2.57
2835 3810 1.068741 GCAACCGGGTCATCTAGTAGG 59.931 57.143 6.32 0.00 0.00 3.18
2836 3811 2.662866 CAACCGGGTCATCTAGTAGGA 58.337 52.381 6.32 0.00 0.00 2.94
2837 3812 3.028850 CAACCGGGTCATCTAGTAGGAA 58.971 50.000 6.32 0.00 0.00 3.36
2838 3813 3.614568 ACCGGGTCATCTAGTAGGAAT 57.385 47.619 6.32 0.00 0.00 3.01
2839 3814 4.736611 ACCGGGTCATCTAGTAGGAATA 57.263 45.455 6.32 0.00 0.00 1.75
2840 3815 4.664392 ACCGGGTCATCTAGTAGGAATAG 58.336 47.826 6.32 0.00 0.00 1.73
2841 3816 4.353191 ACCGGGTCATCTAGTAGGAATAGA 59.647 45.833 6.32 0.00 33.93 1.98
2842 3817 5.163012 ACCGGGTCATCTAGTAGGAATAGAA 60.163 44.000 6.32 0.00 33.17 2.10
2843 3818 5.416326 CCGGGTCATCTAGTAGGAATAGAAG 59.584 48.000 0.00 0.00 33.17 2.85
2844 3819 5.106078 CGGGTCATCTAGTAGGAATAGAAGC 60.106 48.000 0.00 0.00 33.17 3.86
2845 3820 5.775701 GGGTCATCTAGTAGGAATAGAAGCA 59.224 44.000 0.00 0.00 33.17 3.91
2846 3821 6.071616 GGGTCATCTAGTAGGAATAGAAGCAG 60.072 46.154 0.00 0.00 33.17 4.24
2847 3822 6.386654 GTCATCTAGTAGGAATAGAAGCAGC 58.613 44.000 0.00 0.00 33.17 5.25
2848 3823 6.208599 GTCATCTAGTAGGAATAGAAGCAGCT 59.791 42.308 0.00 0.00 33.17 4.24
2849 3824 7.392113 GTCATCTAGTAGGAATAGAAGCAGCTA 59.608 40.741 0.00 0.00 33.17 3.32
2850 3825 7.609918 TCATCTAGTAGGAATAGAAGCAGCTAG 59.390 40.741 0.00 0.00 33.17 3.42
2851 3826 6.843752 TCTAGTAGGAATAGAAGCAGCTAGT 58.156 40.000 0.00 0.00 0.00 2.57
2852 3827 7.975608 TCTAGTAGGAATAGAAGCAGCTAGTA 58.024 38.462 0.00 0.00 0.00 1.82
2853 3828 8.098286 TCTAGTAGGAATAGAAGCAGCTAGTAG 58.902 40.741 0.00 0.00 0.00 2.57
2854 3829 6.607019 AGTAGGAATAGAAGCAGCTAGTAGT 58.393 40.000 0.00 0.00 0.00 2.73
2855 3830 6.713450 AGTAGGAATAGAAGCAGCTAGTAGTC 59.287 42.308 0.00 0.00 0.00 2.59
2856 3831 4.517453 AGGAATAGAAGCAGCTAGTAGTCG 59.483 45.833 0.00 0.00 0.00 4.18
2857 3832 4.276431 GGAATAGAAGCAGCTAGTAGTCGT 59.724 45.833 0.00 0.00 0.00 4.34
2858 3833 4.822036 ATAGAAGCAGCTAGTAGTCGTG 57.178 45.455 0.00 0.00 0.00 4.35
2859 3834 1.746220 AGAAGCAGCTAGTAGTCGTGG 59.254 52.381 0.00 0.00 0.00 4.94
2860 3835 0.818296 AAGCAGCTAGTAGTCGTGGG 59.182 55.000 0.00 0.00 0.00 4.61
2861 3836 1.227002 GCAGCTAGTAGTCGTGGGC 60.227 63.158 0.00 0.00 0.00 5.36
2862 3837 1.945354 GCAGCTAGTAGTCGTGGGCA 61.945 60.000 0.00 0.00 0.00 5.36
2863 3838 0.747255 CAGCTAGTAGTCGTGGGCAT 59.253 55.000 0.00 0.00 0.00 4.40
2864 3839 1.033574 AGCTAGTAGTCGTGGGCATC 58.966 55.000 0.00 0.00 0.00 3.91
2865 3840 0.032267 GCTAGTAGTCGTGGGCATCC 59.968 60.000 0.00 0.00 0.00 3.51
2866 3841 1.399714 CTAGTAGTCGTGGGCATCCA 58.600 55.000 0.00 0.00 41.58 3.41
2867 3842 1.754803 CTAGTAGTCGTGGGCATCCAA 59.245 52.381 0.00 0.00 46.04 3.53
2868 3843 0.981183 AGTAGTCGTGGGCATCCAAA 59.019 50.000 0.00 0.00 46.04 3.28
2869 3844 1.084289 GTAGTCGTGGGCATCCAAAC 58.916 55.000 0.00 0.00 46.04 2.93
2870 3845 0.687920 TAGTCGTGGGCATCCAAACA 59.312 50.000 0.00 0.00 46.04 2.83
2871 3846 0.179004 AGTCGTGGGCATCCAAACAA 60.179 50.000 0.00 0.00 46.04 2.83
2872 3847 0.240945 GTCGTGGGCATCCAAACAAG 59.759 55.000 0.00 0.00 46.04 3.16
2873 3848 0.893270 TCGTGGGCATCCAAACAAGG 60.893 55.000 0.00 0.00 46.04 3.61
2874 3849 0.893270 CGTGGGCATCCAAACAAGGA 60.893 55.000 0.00 0.00 46.04 3.36
2875 3850 1.337118 GTGGGCATCCAAACAAGGAA 58.663 50.000 0.00 0.00 46.04 3.36
2876 3851 1.000843 GTGGGCATCCAAACAAGGAAC 59.999 52.381 0.00 0.00 46.04 3.62
2877 3852 1.133199 TGGGCATCCAAACAAGGAACT 60.133 47.619 0.00 0.00 41.92 3.01
2878 3853 1.273327 GGGCATCCAAACAAGGAACTG 59.727 52.381 0.00 0.00 41.92 3.16
2879 3854 1.273327 GGCATCCAAACAAGGAACTGG 59.727 52.381 0.00 0.00 41.92 4.00
2880 3855 1.273327 GCATCCAAACAAGGAACTGGG 59.727 52.381 0.00 0.00 41.92 4.45
2881 3856 1.273327 CATCCAAACAAGGAACTGGGC 59.727 52.381 0.00 0.00 41.92 5.36
2882 3857 0.469144 TCCAAACAAGGAACTGGGCC 60.469 55.000 0.00 0.00 40.86 5.80
2883 3858 1.659794 CAAACAAGGAACTGGGCCG 59.340 57.895 0.00 0.00 40.86 6.13
2884 3859 0.821711 CAAACAAGGAACTGGGCCGA 60.822 55.000 0.00 0.00 40.86 5.54
2885 3860 0.822121 AAACAAGGAACTGGGCCGAC 60.822 55.000 0.00 0.00 40.86 4.79
2886 3861 2.359975 CAAGGAACTGGGCCGACC 60.360 66.667 0.00 0.00 40.86 4.79
2894 3869 4.167597 TGGGCCGACCAGTTTTTC 57.832 55.556 0.00 0.00 46.80 2.29
2895 3870 1.227664 TGGGCCGACCAGTTTTTCA 59.772 52.632 0.00 0.00 46.80 2.69
2896 3871 0.395862 TGGGCCGACCAGTTTTTCAA 60.396 50.000 0.00 0.00 46.80 2.69
2897 3872 0.747852 GGGCCGACCAGTTTTTCAAA 59.252 50.000 0.00 0.00 39.85 2.69
2898 3873 1.343142 GGGCCGACCAGTTTTTCAAAT 59.657 47.619 0.00 0.00 39.85 2.32
2899 3874 2.224185 GGGCCGACCAGTTTTTCAAATT 60.224 45.455 0.00 0.00 39.85 1.82
2900 3875 3.462982 GGCCGACCAGTTTTTCAAATTT 58.537 40.909 0.00 0.00 35.26 1.82
2901 3876 3.493129 GGCCGACCAGTTTTTCAAATTTC 59.507 43.478 0.00 0.00 35.26 2.17
2902 3877 3.493129 GCCGACCAGTTTTTCAAATTTCC 59.507 43.478 0.00 0.00 0.00 3.13
2903 3878 4.688021 CCGACCAGTTTTTCAAATTTCCA 58.312 39.130 0.00 0.00 0.00 3.53
2904 3879 5.296748 CCGACCAGTTTTTCAAATTTCCAT 58.703 37.500 0.00 0.00 0.00 3.41
2905 3880 6.451393 CCGACCAGTTTTTCAAATTTCCATA 58.549 36.000 0.00 0.00 0.00 2.74
2906 3881 7.096551 CCGACCAGTTTTTCAAATTTCCATAT 58.903 34.615 0.00 0.00 0.00 1.78
2907 3882 7.275560 CCGACCAGTTTTTCAAATTTCCATATC 59.724 37.037 0.00 0.00 0.00 1.63
2908 3883 7.812191 CGACCAGTTTTTCAAATTTCCATATCA 59.188 33.333 0.00 0.00 0.00 2.15
2909 3884 9.487790 GACCAGTTTTTCAAATTTCCATATCAA 57.512 29.630 0.00 0.00 0.00 2.57
2910 3885 9.844257 ACCAGTTTTTCAAATTTCCATATCAAA 57.156 25.926 0.00 0.00 0.00 2.69
2912 3887 9.796062 CAGTTTTTCAAATTTCCATATCAAACG 57.204 29.630 0.00 0.00 0.00 3.60
2913 3888 9.541143 AGTTTTTCAAATTTCCATATCAAACGT 57.459 25.926 0.00 0.00 0.00 3.99
2959 3934 8.943909 TTTGTAAAAATTGATGTAAAACGGGT 57.056 26.923 0.00 0.00 0.00 5.28
2960 3935 8.943909 TTGTAAAAATTGATGTAAAACGGGTT 57.056 26.923 0.00 0.00 0.00 4.11
2961 3936 8.943909 TGTAAAAATTGATGTAAAACGGGTTT 57.056 26.923 0.00 0.00 0.00 3.27
2962 3937 9.379791 TGTAAAAATTGATGTAAAACGGGTTTT 57.620 25.926 13.42 13.42 44.16 2.43
2963 3938 9.852481 GTAAAAATTGATGTAAAACGGGTTTTC 57.148 29.630 12.39 6.26 41.39 2.29
2964 3939 7.485418 AAAATTGATGTAAAACGGGTTTTCC 57.515 32.000 12.39 3.02 41.39 3.13
2965 3940 6.413783 AATTGATGTAAAACGGGTTTTCCT 57.586 33.333 12.39 0.29 41.39 3.36
2966 3941 7.527568 AATTGATGTAAAACGGGTTTTCCTA 57.472 32.000 12.39 2.42 41.39 2.94
2967 3942 6.563222 TTGATGTAAAACGGGTTTTCCTAG 57.437 37.500 12.39 0.00 41.39 3.02
2968 3943 5.867330 TGATGTAAAACGGGTTTTCCTAGA 58.133 37.500 12.39 0.00 41.39 2.43
2969 3944 6.297582 TGATGTAAAACGGGTTTTCCTAGAA 58.702 36.000 12.39 0.00 41.39 2.10
2970 3945 6.771749 TGATGTAAAACGGGTTTTCCTAGAAA 59.228 34.615 12.39 0.00 41.39 2.52
2971 3946 7.449086 TGATGTAAAACGGGTTTTCCTAGAAAT 59.551 33.333 12.39 0.00 41.39 2.17
2972 3947 7.205737 TGTAAAACGGGTTTTCCTAGAAATC 57.794 36.000 12.39 0.00 41.39 2.17
2973 3948 5.366829 AAAACGGGTTTTCCTAGAAATCG 57.633 39.130 3.79 0.00 38.27 3.34
2974 3949 2.981898 ACGGGTTTTCCTAGAAATCGG 58.018 47.619 0.00 0.00 40.46 4.18
2975 3950 1.669265 CGGGTTTTCCTAGAAATCGGC 59.331 52.381 0.00 0.00 40.46 5.54
2976 3951 2.679930 CGGGTTTTCCTAGAAATCGGCT 60.680 50.000 0.00 0.00 40.46 5.52
2977 3952 3.431207 CGGGTTTTCCTAGAAATCGGCTA 60.431 47.826 0.00 0.00 40.46 3.93
2978 3953 4.520179 GGGTTTTCCTAGAAATCGGCTAA 58.480 43.478 0.00 0.00 40.46 3.09
2979 3954 4.945543 GGGTTTTCCTAGAAATCGGCTAAA 59.054 41.667 0.00 0.00 40.46 1.85
2980 3955 5.416639 GGGTTTTCCTAGAAATCGGCTAAAA 59.583 40.000 0.00 0.00 40.46 1.52
2981 3956 6.320171 GGTTTTCCTAGAAATCGGCTAAAAC 58.680 40.000 0.00 0.00 36.94 2.43
2982 3957 6.320171 GTTTTCCTAGAAATCGGCTAAAACC 58.680 40.000 0.00 0.00 0.00 3.27
2983 3958 5.431179 TTCCTAGAAATCGGCTAAAACCT 57.569 39.130 0.00 0.00 0.00 3.50
2984 3959 5.019785 TCCTAGAAATCGGCTAAAACCTC 57.980 43.478 0.00 0.00 0.00 3.85
2985 3960 4.468510 TCCTAGAAATCGGCTAAAACCTCA 59.531 41.667 0.00 0.00 0.00 3.86
2986 3961 5.130477 TCCTAGAAATCGGCTAAAACCTCAT 59.870 40.000 0.00 0.00 0.00 2.90
2987 3962 5.823045 CCTAGAAATCGGCTAAAACCTCATT 59.177 40.000 0.00 0.00 0.00 2.57
2988 3963 6.318900 CCTAGAAATCGGCTAAAACCTCATTT 59.681 38.462 0.00 0.00 0.00 2.32
2989 3964 6.590234 AGAAATCGGCTAAAACCTCATTTT 57.410 33.333 0.00 0.00 43.18 1.82
2990 3965 6.621613 AGAAATCGGCTAAAACCTCATTTTC 58.378 36.000 0.00 0.00 40.99 2.29
2991 3966 6.434340 AGAAATCGGCTAAAACCTCATTTTCT 59.566 34.615 0.00 0.00 40.99 2.52
2992 3967 7.610305 AGAAATCGGCTAAAACCTCATTTTCTA 59.390 33.333 0.00 0.00 40.99 2.10
2993 3968 7.881775 AATCGGCTAAAACCTCATTTTCTAT 57.118 32.000 0.00 0.00 40.99 1.98
2994 3969 8.974060 AATCGGCTAAAACCTCATTTTCTATA 57.026 30.769 0.00 0.00 40.99 1.31
2995 3970 8.974060 ATCGGCTAAAACCTCATTTTCTATAA 57.026 30.769 0.00 0.00 40.99 0.98
2996 3971 8.974060 TCGGCTAAAACCTCATTTTCTATAAT 57.026 30.769 0.00 0.00 40.99 1.28
2997 3972 9.052759 TCGGCTAAAACCTCATTTTCTATAATC 57.947 33.333 0.00 0.00 40.99 1.75
2998 3973 8.290325 CGGCTAAAACCTCATTTTCTATAATCC 58.710 37.037 0.00 0.00 40.99 3.01
2999 3974 9.355916 GGCTAAAACCTCATTTTCTATAATCCT 57.644 33.333 0.00 0.00 40.99 3.24
3004 3979 8.779354 AACCTCATTTTCTATAATCCTATCGC 57.221 34.615 0.00 0.00 0.00 4.58
3005 3980 8.140112 ACCTCATTTTCTATAATCCTATCGCT 57.860 34.615 0.00 0.00 0.00 4.93
3006 3981 9.256228 ACCTCATTTTCTATAATCCTATCGCTA 57.744 33.333 0.00 0.00 0.00 4.26
3015 3990 9.688091 TCTATAATCCTATCGCTAATCTTCACT 57.312 33.333 0.00 0.00 0.00 3.41
3019 3994 6.761099 TCCTATCGCTAATCTTCACTATCC 57.239 41.667 0.00 0.00 0.00 2.59
3020 3995 6.246163 TCCTATCGCTAATCTTCACTATCCA 58.754 40.000 0.00 0.00 0.00 3.41
3021 3996 6.719829 TCCTATCGCTAATCTTCACTATCCAA 59.280 38.462 0.00 0.00 0.00 3.53
3022 3997 7.232737 TCCTATCGCTAATCTTCACTATCCAAA 59.767 37.037 0.00 0.00 0.00 3.28
3023 3998 7.329717 CCTATCGCTAATCTTCACTATCCAAAC 59.670 40.741 0.00 0.00 0.00 2.93
3024 3999 5.972935 TCGCTAATCTTCACTATCCAAACA 58.027 37.500 0.00 0.00 0.00 2.83
3025 4000 6.403049 TCGCTAATCTTCACTATCCAAACAA 58.597 36.000 0.00 0.00 0.00 2.83
3026 4001 6.312918 TCGCTAATCTTCACTATCCAAACAAC 59.687 38.462 0.00 0.00 0.00 3.32
3027 4002 6.478588 GCTAATCTTCACTATCCAAACAACG 58.521 40.000 0.00 0.00 0.00 4.10
3028 4003 4.946784 ATCTTCACTATCCAAACAACGC 57.053 40.909 0.00 0.00 0.00 4.84
3029 4004 3.071479 TCTTCACTATCCAAACAACGCC 58.929 45.455 0.00 0.00 0.00 5.68
3030 4005 2.851263 TCACTATCCAAACAACGCCT 57.149 45.000 0.00 0.00 0.00 5.52
3031 4006 3.134574 TCACTATCCAAACAACGCCTT 57.865 42.857 0.00 0.00 0.00 4.35
3032 4007 4.274602 TCACTATCCAAACAACGCCTTA 57.725 40.909 0.00 0.00 0.00 2.69
3033 4008 4.250464 TCACTATCCAAACAACGCCTTAG 58.750 43.478 0.00 0.00 0.00 2.18
3034 4009 3.374058 CACTATCCAAACAACGCCTTAGG 59.626 47.826 0.00 0.00 0.00 2.69
3035 4010 1.834188 ATCCAAACAACGCCTTAGGG 58.166 50.000 0.00 0.00 0.00 3.53
3048 4023 3.850122 CCTTAGGGCTTTTTGCTACAC 57.150 47.619 0.00 0.00 42.39 2.90
3049 4024 2.492088 CCTTAGGGCTTTTTGCTACACC 59.508 50.000 0.00 0.00 42.39 4.16
3050 4025 3.421844 CTTAGGGCTTTTTGCTACACCT 58.578 45.455 0.00 0.00 42.39 4.00
3051 4026 4.566907 CCTTAGGGCTTTTTGCTACACCTA 60.567 45.833 0.00 0.00 42.39 3.08
3052 4027 2.791655 AGGGCTTTTTGCTACACCTAC 58.208 47.619 0.00 0.00 42.39 3.18
3053 4028 2.107552 AGGGCTTTTTGCTACACCTACA 59.892 45.455 0.00 0.00 42.39 2.74
3054 4029 3.089284 GGGCTTTTTGCTACACCTACAT 58.911 45.455 0.00 0.00 42.39 2.29
3055 4030 4.018779 AGGGCTTTTTGCTACACCTACATA 60.019 41.667 0.00 0.00 42.39 2.29
3056 4031 4.703093 GGGCTTTTTGCTACACCTACATAA 59.297 41.667 0.00 0.00 42.39 1.90
3057 4032 5.184287 GGGCTTTTTGCTACACCTACATAAA 59.816 40.000 0.00 0.00 42.39 1.40
3058 4033 6.127451 GGGCTTTTTGCTACACCTACATAAAT 60.127 38.462 0.00 0.00 42.39 1.40
3059 4034 7.320399 GGCTTTTTGCTACACCTACATAAATT 58.680 34.615 0.00 0.00 42.39 1.82
3060 4035 7.275560 GGCTTTTTGCTACACCTACATAAATTG 59.724 37.037 0.00 0.00 42.39 2.32
3061 4036 7.275560 GCTTTTTGCTACACCTACATAAATTGG 59.724 37.037 0.00 0.00 38.95 3.16
3062 4037 7.768807 TTTTGCTACACCTACATAAATTGGT 57.231 32.000 0.00 0.00 0.00 3.67
3063 4038 7.768807 TTTGCTACACCTACATAAATTGGTT 57.231 32.000 0.00 0.00 0.00 3.67
3064 4039 7.768807 TTGCTACACCTACATAAATTGGTTT 57.231 32.000 0.00 0.00 0.00 3.27
3065 4040 8.865420 TTGCTACACCTACATAAATTGGTTTA 57.135 30.769 0.00 0.00 34.50 2.01
3066 4041 8.271312 TGCTACACCTACATAAATTGGTTTAC 57.729 34.615 0.00 0.00 32.91 2.01
3067 4042 7.064847 TGCTACACCTACATAAATTGGTTTACG 59.935 37.037 0.00 0.00 32.91 3.18
3068 4043 7.064966 GCTACACCTACATAAATTGGTTTACGT 59.935 37.037 0.00 0.00 32.91 3.57
3069 4044 9.585099 CTACACCTACATAAATTGGTTTACGTA 57.415 33.333 0.00 0.00 32.91 3.57
3070 4045 8.483307 ACACCTACATAAATTGGTTTACGTAG 57.517 34.615 0.00 7.01 42.17 3.51
3071 4046 7.064966 ACACCTACATAAATTGGTTTACGTAGC 59.935 37.037 8.04 0.00 41.63 3.58
3072 4047 7.279313 CACCTACATAAATTGGTTTACGTAGCT 59.721 37.037 8.04 0.00 41.63 3.32
3073 4048 7.825761 ACCTACATAAATTGGTTTACGTAGCTT 59.174 33.333 0.00 0.00 41.63 3.74
3074 4049 8.671028 CCTACATAAATTGGTTTACGTAGCTTT 58.329 33.333 0.00 0.00 41.63 3.51
3084 4059 1.708027 CGTAGCTTTACGTGCTGGC 59.292 57.895 8.99 3.22 41.32 4.85
3085 4060 0.736325 CGTAGCTTTACGTGCTGGCT 60.736 55.000 8.99 10.00 41.32 4.75
3086 4061 0.721718 GTAGCTTTACGTGCTGGCTG 59.278 55.000 8.99 0.00 41.32 4.85
3087 4062 0.606096 TAGCTTTACGTGCTGGCTGA 59.394 50.000 8.99 0.00 41.32 4.26
3088 4063 0.951040 AGCTTTACGTGCTGGCTGAC 60.951 55.000 0.00 0.00 39.56 3.51
3089 4064 0.951040 GCTTTACGTGCTGGCTGACT 60.951 55.000 0.00 0.00 0.00 3.41
3090 4065 1.512926 CTTTACGTGCTGGCTGACTT 58.487 50.000 0.00 0.00 0.00 3.01
3091 4066 1.195448 CTTTACGTGCTGGCTGACTTG 59.805 52.381 0.00 0.00 0.00 3.16
3092 4067 0.602638 TTACGTGCTGGCTGACTTGG 60.603 55.000 0.00 0.00 0.00 3.61
3093 4068 2.449031 TACGTGCTGGCTGACTTGGG 62.449 60.000 0.00 0.00 0.00 4.12
3094 4069 3.368571 GTGCTGGCTGACTTGGGC 61.369 66.667 0.00 0.00 0.00 5.36
3095 4070 3.573229 TGCTGGCTGACTTGGGCT 61.573 61.111 0.00 0.00 0.00 5.19
3096 4071 2.223443 TGCTGGCTGACTTGGGCTA 61.223 57.895 0.00 0.00 0.00 3.93
3097 4072 1.002134 GCTGGCTGACTTGGGCTAA 60.002 57.895 0.00 0.00 0.00 3.09
3098 4073 0.394899 GCTGGCTGACTTGGGCTAAT 60.395 55.000 0.00 0.00 0.00 1.73
3099 4074 1.673168 CTGGCTGACTTGGGCTAATC 58.327 55.000 0.00 0.00 0.00 1.75
3100 4075 1.211457 CTGGCTGACTTGGGCTAATCT 59.789 52.381 0.00 0.00 0.00 2.40
3101 4076 1.065199 TGGCTGACTTGGGCTAATCTG 60.065 52.381 0.00 0.00 0.00 2.90
3102 4077 1.210478 GGCTGACTTGGGCTAATCTGA 59.790 52.381 0.00 0.00 0.00 3.27
3103 4078 2.158696 GGCTGACTTGGGCTAATCTGAT 60.159 50.000 0.00 0.00 0.00 2.90
3104 4079 3.549794 GCTGACTTGGGCTAATCTGATT 58.450 45.455 8.14 8.14 0.00 2.57
3105 4080 3.314635 GCTGACTTGGGCTAATCTGATTG 59.685 47.826 13.01 4.63 0.00 2.67
3106 4081 3.881688 CTGACTTGGGCTAATCTGATTGG 59.118 47.826 13.01 11.03 0.00 3.16
3107 4082 3.523157 TGACTTGGGCTAATCTGATTGGA 59.477 43.478 16.72 0.00 0.00 3.53
3108 4083 4.018506 TGACTTGGGCTAATCTGATTGGAA 60.019 41.667 16.72 2.76 0.00 3.53
3109 4084 4.530875 ACTTGGGCTAATCTGATTGGAAG 58.469 43.478 16.72 12.99 0.00 3.46
3110 4085 3.582998 TGGGCTAATCTGATTGGAAGG 57.417 47.619 16.72 2.44 0.00 3.46
3111 4086 3.122480 TGGGCTAATCTGATTGGAAGGA 58.878 45.455 16.72 0.00 0.00 3.36
3112 4087 3.527253 TGGGCTAATCTGATTGGAAGGAA 59.473 43.478 16.72 0.00 0.00 3.36
3113 4088 4.017591 TGGGCTAATCTGATTGGAAGGAAA 60.018 41.667 16.72 0.00 0.00 3.13
3114 4089 4.956075 GGGCTAATCTGATTGGAAGGAAAA 59.044 41.667 16.72 0.00 0.00 2.29
3115 4090 5.600069 GGGCTAATCTGATTGGAAGGAAAAT 59.400 40.000 16.72 0.00 0.00 1.82
3116 4091 6.098838 GGGCTAATCTGATTGGAAGGAAAATT 59.901 38.462 16.72 0.00 0.00 1.82
3117 4092 7.287696 GGGCTAATCTGATTGGAAGGAAAATTA 59.712 37.037 16.72 0.00 0.00 1.40
3118 4093 8.355913 GGCTAATCTGATTGGAAGGAAAATTAG 58.644 37.037 16.72 1.56 0.00 1.73
3119 4094 9.125026 GCTAATCTGATTGGAAGGAAAATTAGA 57.875 33.333 16.72 0.00 34.22 2.10
3121 4096 7.888250 ATCTGATTGGAAGGAAAATTAGACC 57.112 36.000 0.00 0.00 33.00 3.85
3122 4097 6.187682 TCTGATTGGAAGGAAAATTAGACCC 58.812 40.000 0.00 0.00 0.00 4.46
3123 4098 5.898120 TGATTGGAAGGAAAATTAGACCCA 58.102 37.500 0.00 0.00 0.00 4.51
3124 4099 6.318913 TGATTGGAAGGAAAATTAGACCCAA 58.681 36.000 0.00 0.00 36.93 4.12
3125 4100 6.784969 TGATTGGAAGGAAAATTAGACCCAAA 59.215 34.615 0.00 0.00 36.23 3.28
3126 4101 6.413783 TTGGAAGGAAAATTAGACCCAAAC 57.586 37.500 0.00 0.00 30.45 2.93
3127 4102 4.836175 TGGAAGGAAAATTAGACCCAAACC 59.164 41.667 0.00 0.00 0.00 3.27
3128 4103 4.222145 GGAAGGAAAATTAGACCCAAACCC 59.778 45.833 0.00 0.00 0.00 4.11
3129 4104 4.479156 AGGAAAATTAGACCCAAACCCA 57.521 40.909 0.00 0.00 0.00 4.51
3130 4105 4.157246 AGGAAAATTAGACCCAAACCCAC 58.843 43.478 0.00 0.00 0.00 4.61
3131 4106 3.898741 GGAAAATTAGACCCAAACCCACA 59.101 43.478 0.00 0.00 0.00 4.17
3132 4107 4.262292 GGAAAATTAGACCCAAACCCACAC 60.262 45.833 0.00 0.00 0.00 3.82
3133 4108 2.597578 ATTAGACCCAAACCCACACC 57.402 50.000 0.00 0.00 0.00 4.16
3134 4109 0.108963 TTAGACCCAAACCCACACCG 59.891 55.000 0.00 0.00 0.00 4.94
3135 4110 1.055551 TAGACCCAAACCCACACCGT 61.056 55.000 0.00 0.00 0.00 4.83
3136 4111 1.055551 AGACCCAAACCCACACCGTA 61.056 55.000 0.00 0.00 0.00 4.02
3137 4112 0.179023 GACCCAAACCCACACCGTAA 60.179 55.000 0.00 0.00 0.00 3.18
3138 4113 0.258194 ACCCAAACCCACACCGTAAA 59.742 50.000 0.00 0.00 0.00 2.01
3139 4114 1.341778 ACCCAAACCCACACCGTAAAA 60.342 47.619 0.00 0.00 0.00 1.52
3140 4115 1.067364 CCCAAACCCACACCGTAAAAC 59.933 52.381 0.00 0.00 0.00 2.43
3141 4116 2.025898 CCAAACCCACACCGTAAAACT 58.974 47.619 0.00 0.00 0.00 2.66
3142 4117 2.033675 CCAAACCCACACCGTAAAACTC 59.966 50.000 0.00 0.00 0.00 3.01
3143 4118 2.683867 CAAACCCACACCGTAAAACTCA 59.316 45.455 0.00 0.00 0.00 3.41
3144 4119 2.249844 ACCCACACCGTAAAACTCAG 57.750 50.000 0.00 0.00 0.00 3.35
3145 4120 1.202722 ACCCACACCGTAAAACTCAGG 60.203 52.381 0.00 0.00 0.00 3.86
3146 4121 1.519408 CCACACCGTAAAACTCAGGG 58.481 55.000 0.00 0.00 0.00 4.45
3147 4122 1.519408 CACACCGTAAAACTCAGGGG 58.481 55.000 0.00 0.00 0.00 4.79
3148 4123 1.134228 ACACCGTAAAACTCAGGGGT 58.866 50.000 0.00 0.00 35.19 4.95
3149 4124 1.491754 ACACCGTAAAACTCAGGGGTT 59.508 47.619 0.00 0.00 36.99 4.11
3150 4125 2.092267 ACACCGTAAAACTCAGGGGTTT 60.092 45.455 0.00 0.00 36.99 3.27
3151 4126 3.136260 ACACCGTAAAACTCAGGGGTTTA 59.864 43.478 0.00 0.00 36.99 2.01
3152 4127 3.749609 CACCGTAAAACTCAGGGGTTTAG 59.250 47.826 0.00 0.00 37.71 1.85
3153 4128 3.647590 ACCGTAAAACTCAGGGGTTTAGA 59.352 43.478 0.00 0.00 37.71 2.10
3154 4129 4.251268 CCGTAAAACTCAGGGGTTTAGAG 58.749 47.826 0.00 0.00 37.71 2.43
3155 4130 4.020839 CCGTAAAACTCAGGGGTTTAGAGA 60.021 45.833 0.00 0.00 37.71 3.10
3156 4131 5.169295 CGTAAAACTCAGGGGTTTAGAGAG 58.831 45.833 0.00 0.00 37.71 3.20
3157 4132 4.642466 AAAACTCAGGGGTTTAGAGAGG 57.358 45.455 0.00 0.00 38.30 3.69
3158 4133 3.562108 AACTCAGGGGTTTAGAGAGGA 57.438 47.619 0.00 0.00 33.69 3.71
3159 4134 3.786213 ACTCAGGGGTTTAGAGAGGAT 57.214 47.619 0.00 0.00 33.69 3.24
3160 4135 4.901785 ACTCAGGGGTTTAGAGAGGATA 57.098 45.455 0.00 0.00 33.69 2.59
3161 4136 4.810345 ACTCAGGGGTTTAGAGAGGATAG 58.190 47.826 0.00 0.00 33.69 2.08
3162 4137 4.482772 ACTCAGGGGTTTAGAGAGGATAGA 59.517 45.833 0.00 0.00 33.69 1.98
3163 4138 5.043281 ACTCAGGGGTTTAGAGAGGATAGAA 60.043 44.000 0.00 0.00 33.69 2.10
3164 4139 5.209659 TCAGGGGTTTAGAGAGGATAGAAC 58.790 45.833 0.00 0.00 0.00 3.01
3165 4140 4.962995 CAGGGGTTTAGAGAGGATAGAACA 59.037 45.833 0.00 0.00 0.00 3.18
3166 4141 5.604650 CAGGGGTTTAGAGAGGATAGAACAT 59.395 44.000 0.00 0.00 0.00 2.71
3167 4142 6.782988 CAGGGGTTTAGAGAGGATAGAACATA 59.217 42.308 0.00 0.00 0.00 2.29
3168 4143 7.013834 AGGGGTTTAGAGAGGATAGAACATAG 58.986 42.308 0.00 0.00 0.00 2.23
3169 4144 6.211785 GGGGTTTAGAGAGGATAGAACATAGG 59.788 46.154 0.00 0.00 0.00 2.57
3170 4145 6.783482 GGGTTTAGAGAGGATAGAACATAGGT 59.217 42.308 0.00 0.00 0.00 3.08
3171 4146 7.290481 GGGTTTAGAGAGGATAGAACATAGGTT 59.710 40.741 0.00 0.00 40.76 3.50
3172 4147 8.706521 GGTTTAGAGAGGATAGAACATAGGTTT 58.293 37.037 0.00 0.00 37.36 3.27
3175 4150 7.513371 AGAGAGGATAGAACATAGGTTTACG 57.487 40.000 0.00 0.00 37.36 3.18
3176 4151 7.061688 AGAGAGGATAGAACATAGGTTTACGT 58.938 38.462 0.00 0.00 37.36 3.57
3177 4152 8.216423 AGAGAGGATAGAACATAGGTTTACGTA 58.784 37.037 0.00 0.00 37.36 3.57
3178 4153 8.393671 AGAGGATAGAACATAGGTTTACGTAG 57.606 38.462 0.00 0.00 37.36 3.51
3179 4154 7.447853 AGAGGATAGAACATAGGTTTACGTAGG 59.552 40.741 0.00 0.00 37.36 3.18
3180 4155 7.065504 AGGATAGAACATAGGTTTACGTAGGT 58.934 38.462 0.00 0.00 37.36 3.08
3181 4156 7.562821 AGGATAGAACATAGGTTTACGTAGGTT 59.437 37.037 11.05 11.05 41.74 3.50
3182 4157 7.650903 GGATAGAACATAGGTTTACGTAGGTTG 59.349 40.741 14.75 0.42 40.00 3.77
3183 4158 6.594788 AGAACATAGGTTTACGTAGGTTGA 57.405 37.500 14.75 0.00 40.00 3.18
3184 4159 7.179076 AGAACATAGGTTTACGTAGGTTGAT 57.821 36.000 14.75 4.00 40.00 2.57
3185 4160 7.618137 AGAACATAGGTTTACGTAGGTTGATT 58.382 34.615 14.75 1.89 40.00 2.57
3186 4161 8.752187 AGAACATAGGTTTACGTAGGTTGATTA 58.248 33.333 14.75 0.00 40.00 1.75
3187 4162 8.707938 AACATAGGTTTACGTAGGTTGATTAC 57.292 34.615 10.61 0.00 38.97 1.89
3188 4163 6.974622 ACATAGGTTTACGTAGGTTGATTACG 59.025 38.462 0.00 3.54 46.82 3.18
3195 4170 4.889832 CGTAGGTTGATTACGTAGGTCT 57.110 45.455 10.26 1.66 39.13 3.85
3196 4171 5.991328 CGTAGGTTGATTACGTAGGTCTA 57.009 43.478 10.26 2.16 39.13 2.59
3212 4187 5.193099 AGGTCTAGCATTATTGGGTTGTT 57.807 39.130 0.00 0.00 0.00 2.83
3216 4191 7.502561 AGGTCTAGCATTATTGGGTTGTTTATC 59.497 37.037 0.00 0.00 0.00 1.75
3228 4203 8.934023 TTGGGTTGTTTATCACTCTTATCTTT 57.066 30.769 0.00 0.00 0.00 2.52
3329 4308 5.607119 TTTTCTATCTTCTTCGCCACAAC 57.393 39.130 0.00 0.00 0.00 3.32
3330 4309 3.953712 TCTATCTTCTTCGCCACAACA 57.046 42.857 0.00 0.00 0.00 3.33
3337 4316 3.057969 TCTTCGCCACAACATTCATCT 57.942 42.857 0.00 0.00 0.00 2.90
3346 4325 3.191791 CACAACATTCATCTCATGTGGCA 59.808 43.478 0.00 0.00 34.97 4.92
3363 4342 9.100197 TCATGTGGCACTCCTAAGATAATTATA 57.900 33.333 19.83 0.00 0.00 0.98
3414 4393 5.251764 CCCATGTGAGTTGATTTTCTCTCT 58.748 41.667 0.00 0.00 0.00 3.10
3438 4421 0.451783 GCTCCATTTGTAACAGGCCG 59.548 55.000 0.00 0.00 0.00 6.13
3440 4423 1.737793 CTCCATTTGTAACAGGCCGAC 59.262 52.381 0.00 0.00 0.00 4.79
3454 4454 2.997315 CGACTGGCCCAGAGACCA 60.997 66.667 19.90 0.00 35.18 4.02
3458 4458 0.178903 ACTGGCCCAGAGACCAACTA 60.179 55.000 19.90 0.00 34.96 2.24
3479 4479 4.086706 ACAACCCAGAAGTTAAGTGAGG 57.913 45.455 0.00 0.00 0.00 3.86
3488 4488 7.447238 CCCAGAAGTTAAGTGAGGTATTTGAAA 59.553 37.037 0.00 0.00 0.00 2.69
3522 4522 6.716628 TCTTCAACTGTCTGCCAATAATTCTT 59.283 34.615 0.00 0.00 0.00 2.52
3524 4524 6.913170 TCAACTGTCTGCCAATAATTCTTTC 58.087 36.000 0.00 0.00 0.00 2.62
3557 4557 6.509317 TTTGATCAAACTTCGAAATTGCAC 57.491 33.333 16.91 12.22 0.00 4.57
3631 4631 0.962356 AGCAACACTATGGGCAGCAC 60.962 55.000 0.00 0.00 0.00 4.40
3632 4632 1.796151 CAACACTATGGGCAGCACG 59.204 57.895 0.00 0.00 0.00 5.34
3633 4633 0.955428 CAACACTATGGGCAGCACGT 60.955 55.000 0.00 0.00 0.00 4.49
3651 4651 4.663166 CACGTGTAACAAATGTTGGTTCA 58.337 39.130 7.58 1.32 38.90 3.18
3665 4665 5.389520 TGTTGGTTCAATAAATCACCCTCA 58.610 37.500 0.00 0.00 0.00 3.86
3718 4719 7.825331 TGGGAACTATACAAACAAATGAACA 57.175 32.000 0.00 0.00 0.00 3.18
3719 4720 8.239038 TGGGAACTATACAAACAAATGAACAA 57.761 30.769 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1737 2585 0.178912 AGGGTCCGACCACTTTAGGT 60.179 55.000 19.43 0.00 46.82 3.08
1738 2586 0.981943 AAGGGTCCGACCACTTTAGG 59.018 55.000 19.43 0.00 41.02 2.69
1739 2587 1.066358 GGAAGGGTCCGACCACTTTAG 60.066 57.143 19.43 0.00 41.02 1.85
1740 2588 0.978907 GGAAGGGTCCGACCACTTTA 59.021 55.000 19.43 0.00 41.02 1.85
1741 2589 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
1742 2590 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
1743 2591 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
1744 2592 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
1745 2593 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
1746 2594 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
1747 2595 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
1748 2596 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
1749 2597 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
1750 2598 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
1751 2599 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
1752 2600 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
1753 2601 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
1754 2602 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
1755 2603 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
1767 2615 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
1770 2618 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
1771 2619 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
1772 2620 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
1773 2621 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
1779 2627 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
1780 2628 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
1781 2629 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
1782 2630 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
1783 2631 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
1795 2643 9.574458 GATTTAAGAGAAGATAAAAAGGGCAAC 57.426 33.333 0.00 0.00 0.00 4.17
1796 2644 9.533831 AGATTTAAGAGAAGATAAAAAGGGCAA 57.466 29.630 0.00 0.00 0.00 4.52
1797 2645 9.533831 AAGATTTAAGAGAAGATAAAAAGGGCA 57.466 29.630 0.00 0.00 0.00 5.36
1798 2646 9.794685 CAAGATTTAAGAGAAGATAAAAAGGGC 57.205 33.333 0.00 0.00 0.00 5.19
1996 2844 8.670135 CAATTTTTAGACGATGGTACCACATAA 58.330 33.333 19.09 9.11 0.00 1.90
1997 2845 7.281324 CCAATTTTTAGACGATGGTACCACATA 59.719 37.037 19.09 3.03 0.00 2.29
1998 2846 6.094881 CCAATTTTTAGACGATGGTACCACAT 59.905 38.462 19.09 1.04 0.00 3.21
1999 2847 5.413213 CCAATTTTTAGACGATGGTACCACA 59.587 40.000 19.09 0.00 0.00 4.17
2000 2848 5.413523 ACCAATTTTTAGACGATGGTACCAC 59.586 40.000 19.09 10.47 39.29 4.16
2001 2849 5.562635 ACCAATTTTTAGACGATGGTACCA 58.437 37.500 18.99 18.99 39.29 3.25
2002 2850 5.065602 GGACCAATTTTTAGACGATGGTACC 59.934 44.000 4.43 4.43 41.04 3.34
2003 2851 5.878669 AGGACCAATTTTTAGACGATGGTAC 59.121 40.000 0.00 0.00 41.04 3.34
2004 2852 6.057321 AGGACCAATTTTTAGACGATGGTA 57.943 37.500 0.00 0.00 41.04 3.25
2005 2853 4.918588 AGGACCAATTTTTAGACGATGGT 58.081 39.130 0.00 0.00 43.50 3.55
2006 2854 6.995511 TTAGGACCAATTTTTAGACGATGG 57.004 37.500 0.00 0.00 0.00 3.51
2007 2855 8.263940 TCTTTAGGACCAATTTTTAGACGATG 57.736 34.615 0.00 0.00 0.00 3.84
2009 2857 9.374838 GTATCTTTAGGACCAATTTTTAGACGA 57.625 33.333 0.00 0.00 0.00 4.20
2010 2858 9.158233 TGTATCTTTAGGACCAATTTTTAGACG 57.842 33.333 0.00 0.00 0.00 4.18
2015 2863 8.749354 GGTCATGTATCTTTAGGACCAATTTTT 58.251 33.333 0.00 0.00 43.27 1.94
2016 2864 8.293699 GGTCATGTATCTTTAGGACCAATTTT 57.706 34.615 0.00 0.00 43.27 1.82
2017 2865 7.881775 GGTCATGTATCTTTAGGACCAATTT 57.118 36.000 0.00 0.00 43.27 1.82
2022 2870 6.174720 TCATGGTCATGTATCTTTAGGACC 57.825 41.667 10.32 0.00 43.88 4.46
2023 2871 9.209175 GTATTCATGGTCATGTATCTTTAGGAC 57.791 37.037 10.32 0.00 39.72 3.85
2024 2872 8.088365 CGTATTCATGGTCATGTATCTTTAGGA 58.912 37.037 10.32 0.00 39.72 2.94
2025 2873 7.872993 ACGTATTCATGGTCATGTATCTTTAGG 59.127 37.037 10.32 1.70 39.72 2.69
2026 2874 8.818141 ACGTATTCATGGTCATGTATCTTTAG 57.182 34.615 10.32 1.93 39.72 1.85
2027 2875 9.040939 CAACGTATTCATGGTCATGTATCTTTA 57.959 33.333 10.32 0.00 39.72 1.85
2028 2876 7.467267 GCAACGTATTCATGGTCATGTATCTTT 60.467 37.037 10.32 0.26 39.72 2.52
2029 2877 6.017934 GCAACGTATTCATGGTCATGTATCTT 60.018 38.462 10.32 0.00 39.72 2.40
2030 2878 5.466728 GCAACGTATTCATGGTCATGTATCT 59.533 40.000 10.32 0.00 39.72 1.98
2031 2879 5.236263 TGCAACGTATTCATGGTCATGTATC 59.764 40.000 10.32 2.09 39.72 2.24
2032 2880 5.122519 TGCAACGTATTCATGGTCATGTAT 58.877 37.500 10.32 9.02 39.72 2.29
2033 2881 4.508662 TGCAACGTATTCATGGTCATGTA 58.491 39.130 10.32 2.18 39.72 2.29
2034 2882 3.342719 TGCAACGTATTCATGGTCATGT 58.657 40.909 10.32 0.00 39.72 3.21
2035 2883 4.354071 TTGCAACGTATTCATGGTCATG 57.646 40.909 0.00 4.67 40.09 3.07
2036 2884 4.883585 AGATTGCAACGTATTCATGGTCAT 59.116 37.500 0.00 0.00 0.00 3.06
2134 3066 7.041644 CCGTTCCAAAATAACTGTCTCAACTTA 60.042 37.037 0.00 0.00 0.00 2.24
2532 3496 1.377994 CTGCTGTCCTGAGCCCTTT 59.622 57.895 0.00 0.00 38.28 3.11
2834 3809 4.276431 ACGACTACTAGCTGCTTCTATTCC 59.724 45.833 7.79 0.00 0.00 3.01
2835 3810 5.209240 CACGACTACTAGCTGCTTCTATTC 58.791 45.833 7.79 0.98 0.00 1.75
2836 3811 4.036971 CCACGACTACTAGCTGCTTCTATT 59.963 45.833 7.79 0.00 0.00 1.73
2837 3812 3.566322 CCACGACTACTAGCTGCTTCTAT 59.434 47.826 7.79 0.00 0.00 1.98
2838 3813 2.943690 CCACGACTACTAGCTGCTTCTA 59.056 50.000 7.79 0.00 0.00 2.10
2839 3814 1.746220 CCACGACTACTAGCTGCTTCT 59.254 52.381 7.79 0.00 0.00 2.85
2840 3815 1.202313 CCCACGACTACTAGCTGCTTC 60.202 57.143 7.79 0.00 0.00 3.86
2841 3816 0.818296 CCCACGACTACTAGCTGCTT 59.182 55.000 7.79 0.00 0.00 3.91
2842 3817 1.668101 GCCCACGACTACTAGCTGCT 61.668 60.000 7.57 7.57 0.00 4.24
2843 3818 1.227002 GCCCACGACTACTAGCTGC 60.227 63.158 0.00 0.00 0.00 5.25
2844 3819 0.747255 ATGCCCACGACTACTAGCTG 59.253 55.000 0.00 0.00 0.00 4.24
2845 3820 1.033574 GATGCCCACGACTACTAGCT 58.966 55.000 0.00 0.00 0.00 3.32
2846 3821 0.032267 GGATGCCCACGACTACTAGC 59.968 60.000 0.00 0.00 0.00 3.42
2847 3822 1.399714 TGGATGCCCACGACTACTAG 58.600 55.000 0.00 0.00 37.58 2.57
2848 3823 1.855295 TTGGATGCCCACGACTACTA 58.145 50.000 0.00 0.00 43.41 1.82
2849 3824 0.981183 TTTGGATGCCCACGACTACT 59.019 50.000 0.00 0.00 43.41 2.57
2850 3825 1.084289 GTTTGGATGCCCACGACTAC 58.916 55.000 0.00 0.00 43.41 2.73
2851 3826 0.687920 TGTTTGGATGCCCACGACTA 59.312 50.000 0.00 0.00 43.41 2.59
2852 3827 0.179004 TTGTTTGGATGCCCACGACT 60.179 50.000 0.00 0.00 43.41 4.18
2853 3828 0.240945 CTTGTTTGGATGCCCACGAC 59.759 55.000 0.00 0.00 43.41 4.34
2854 3829 0.893270 CCTTGTTTGGATGCCCACGA 60.893 55.000 0.00 0.00 43.41 4.35
2855 3830 0.893270 TCCTTGTTTGGATGCCCACG 60.893 55.000 0.00 0.00 43.41 4.94
2856 3831 1.000843 GTTCCTTGTTTGGATGCCCAC 59.999 52.381 0.00 0.00 43.41 4.61
2857 3832 1.133199 AGTTCCTTGTTTGGATGCCCA 60.133 47.619 0.00 0.00 41.64 5.36
2858 3833 1.273327 CAGTTCCTTGTTTGGATGCCC 59.727 52.381 0.00 0.00 35.83 5.36
2859 3834 1.273327 CCAGTTCCTTGTTTGGATGCC 59.727 52.381 0.00 0.00 35.83 4.40
2860 3835 1.273327 CCCAGTTCCTTGTTTGGATGC 59.727 52.381 0.00 0.00 35.83 3.91
2861 3836 1.273327 GCCCAGTTCCTTGTTTGGATG 59.727 52.381 0.00 0.00 35.83 3.51
2862 3837 1.632589 GCCCAGTTCCTTGTTTGGAT 58.367 50.000 0.00 0.00 35.83 3.41
2863 3838 0.469144 GGCCCAGTTCCTTGTTTGGA 60.469 55.000 0.00 0.00 32.34 3.53
2864 3839 1.805428 CGGCCCAGTTCCTTGTTTGG 61.805 60.000 0.00 0.00 0.00 3.28
2865 3840 0.821711 TCGGCCCAGTTCCTTGTTTG 60.822 55.000 0.00 0.00 0.00 2.93
2866 3841 0.822121 GTCGGCCCAGTTCCTTGTTT 60.822 55.000 0.00 0.00 0.00 2.83
2867 3842 1.228154 GTCGGCCCAGTTCCTTGTT 60.228 57.895 0.00 0.00 0.00 2.83
2868 3843 2.430367 GTCGGCCCAGTTCCTTGT 59.570 61.111 0.00 0.00 0.00 3.16
2869 3844 2.359975 GGTCGGCCCAGTTCCTTG 60.360 66.667 0.00 0.00 0.00 3.61
2870 3845 2.852075 TGGTCGGCCCAGTTCCTT 60.852 61.111 2.12 0.00 38.72 3.36
2877 3852 0.395862 TTGAAAAACTGGTCGGCCCA 60.396 50.000 2.12 0.00 42.51 5.36
2878 3853 0.747852 TTTGAAAAACTGGTCGGCCC 59.252 50.000 2.12 0.00 0.00 5.80
2879 3854 2.812358 ATTTGAAAAACTGGTCGGCC 57.188 45.000 0.00 0.00 0.00 6.13
2880 3855 3.493129 GGAAATTTGAAAAACTGGTCGGC 59.507 43.478 0.00 0.00 0.00 5.54
2881 3856 4.688021 TGGAAATTTGAAAAACTGGTCGG 58.312 39.130 0.00 0.00 0.00 4.79
2882 3857 7.812191 TGATATGGAAATTTGAAAAACTGGTCG 59.188 33.333 0.00 0.00 0.00 4.79
2883 3858 9.487790 TTGATATGGAAATTTGAAAAACTGGTC 57.512 29.630 0.00 0.00 0.00 4.02
2884 3859 9.844257 TTTGATATGGAAATTTGAAAAACTGGT 57.156 25.926 0.00 0.00 0.00 4.00
2886 3861 9.796062 CGTTTGATATGGAAATTTGAAAAACTG 57.204 29.630 0.00 0.00 0.00 3.16
2887 3862 9.541143 ACGTTTGATATGGAAATTTGAAAAACT 57.459 25.926 0.00 0.00 0.00 2.66
2905 3880 9.444600 ACCAGTTCATAAATAACTACGTTTGAT 57.555 29.630 0.00 0.00 35.44 2.57
2906 3881 8.836268 ACCAGTTCATAAATAACTACGTTTGA 57.164 30.769 0.00 0.00 35.44 2.69
2933 3908 9.549078 ACCCGTTTTACATCAATTTTTACAAAT 57.451 25.926 0.00 0.00 33.72 2.32
2934 3909 8.943909 ACCCGTTTTACATCAATTTTTACAAA 57.056 26.923 0.00 0.00 0.00 2.83
2935 3910 8.943909 AACCCGTTTTACATCAATTTTTACAA 57.056 26.923 0.00 0.00 0.00 2.41
2936 3911 8.943909 AAACCCGTTTTACATCAATTTTTACA 57.056 26.923 0.00 0.00 0.00 2.41
2937 3912 9.852481 GAAAACCCGTTTTACATCAATTTTTAC 57.148 29.630 5.57 0.00 42.26 2.01
2938 3913 9.043079 GGAAAACCCGTTTTACATCAATTTTTA 57.957 29.630 9.87 0.00 41.75 1.52
2939 3914 7.771361 AGGAAAACCCGTTTTACATCAATTTTT 59.229 29.630 15.78 0.00 43.93 1.94
2940 3915 7.276658 AGGAAAACCCGTTTTACATCAATTTT 58.723 30.769 15.78 0.00 43.93 1.82
2941 3916 6.822442 AGGAAAACCCGTTTTACATCAATTT 58.178 32.000 15.78 0.00 43.93 1.82
2942 3917 6.413783 AGGAAAACCCGTTTTACATCAATT 57.586 33.333 15.78 0.00 43.93 2.32
2943 3918 6.943718 TCTAGGAAAACCCGTTTTACATCAAT 59.056 34.615 15.78 0.00 43.93 2.57
2944 3919 6.297582 TCTAGGAAAACCCGTTTTACATCAA 58.702 36.000 15.78 0.58 43.93 2.57
2945 3920 5.867330 TCTAGGAAAACCCGTTTTACATCA 58.133 37.500 15.78 2.31 43.93 3.07
2946 3921 6.806388 TTCTAGGAAAACCCGTTTTACATC 57.194 37.500 15.78 0.69 43.93 3.06
2947 3922 7.361457 CGATTTCTAGGAAAACCCGTTTTACAT 60.361 37.037 15.78 2.34 43.93 2.29
2948 3923 6.073112 CGATTTCTAGGAAAACCCGTTTTACA 60.073 38.462 15.78 3.59 43.93 2.41
2949 3924 6.309436 CGATTTCTAGGAAAACCCGTTTTAC 58.691 40.000 7.11 7.11 42.26 2.01
2950 3925 5.412286 CCGATTTCTAGGAAAACCCGTTTTA 59.588 40.000 5.57 0.00 42.26 1.52
2951 3926 4.216902 CCGATTTCTAGGAAAACCCGTTTT 59.783 41.667 5.27 5.27 44.59 2.43
2952 3927 3.754850 CCGATTTCTAGGAAAACCCGTTT 59.245 43.478 0.00 0.00 40.87 3.60
2953 3928 3.340928 CCGATTTCTAGGAAAACCCGTT 58.659 45.455 0.00 0.00 40.87 4.44
2954 3929 2.938314 GCCGATTTCTAGGAAAACCCGT 60.938 50.000 0.00 0.00 40.87 5.28
2955 3930 1.669265 GCCGATTTCTAGGAAAACCCG 59.331 52.381 0.00 2.57 40.87 5.28
2956 3931 3.000684 AGCCGATTTCTAGGAAAACCC 57.999 47.619 0.00 0.00 0.00 4.11
2957 3932 6.320171 GTTTTAGCCGATTTCTAGGAAAACC 58.680 40.000 0.00 0.00 32.56 3.27
2958 3933 6.150641 AGGTTTTAGCCGATTTCTAGGAAAAC 59.849 38.462 0.00 0.00 35.36 2.43
2959 3934 6.243148 AGGTTTTAGCCGATTTCTAGGAAAA 58.757 36.000 0.00 0.00 0.00 2.29
2960 3935 5.812286 AGGTTTTAGCCGATTTCTAGGAAA 58.188 37.500 0.00 0.00 0.00 3.13
2961 3936 5.046159 TGAGGTTTTAGCCGATTTCTAGGAA 60.046 40.000 0.00 0.00 0.00 3.36
2962 3937 4.468510 TGAGGTTTTAGCCGATTTCTAGGA 59.531 41.667 0.00 0.00 0.00 2.94
2963 3938 4.766375 TGAGGTTTTAGCCGATTTCTAGG 58.234 43.478 0.00 0.00 0.00 3.02
2964 3939 6.927294 AATGAGGTTTTAGCCGATTTCTAG 57.073 37.500 0.00 0.00 0.00 2.43
2965 3940 7.610305 AGAAAATGAGGTTTTAGCCGATTTCTA 59.390 33.333 0.00 0.00 40.04 2.10
2966 3941 6.434340 AGAAAATGAGGTTTTAGCCGATTTCT 59.566 34.615 0.00 0.00 40.04 2.52
2967 3942 6.621613 AGAAAATGAGGTTTTAGCCGATTTC 58.378 36.000 0.00 0.00 40.04 2.17
2968 3943 6.590234 AGAAAATGAGGTTTTAGCCGATTT 57.410 33.333 0.00 0.00 40.04 2.17
2969 3944 7.881775 ATAGAAAATGAGGTTTTAGCCGATT 57.118 32.000 0.00 0.00 40.04 3.34
2970 3945 8.974060 TTATAGAAAATGAGGTTTTAGCCGAT 57.026 30.769 0.00 0.00 40.04 4.18
2971 3946 8.974060 ATTATAGAAAATGAGGTTTTAGCCGA 57.026 30.769 0.00 0.00 40.04 5.54
2972 3947 8.290325 GGATTATAGAAAATGAGGTTTTAGCCG 58.710 37.037 0.00 0.00 40.04 5.52
2973 3948 9.355916 AGGATTATAGAAAATGAGGTTTTAGCC 57.644 33.333 0.00 0.00 40.04 3.93
2978 3953 9.220767 GCGATAGGATTATAGAAAATGAGGTTT 57.779 33.333 0.00 0.00 0.00 3.27
2979 3954 8.598041 AGCGATAGGATTATAGAAAATGAGGTT 58.402 33.333 0.00 0.00 0.00 3.50
2980 3955 8.140112 AGCGATAGGATTATAGAAAATGAGGT 57.860 34.615 0.00 0.00 0.00 3.85
2989 3964 9.688091 AGTGAAGATTAGCGATAGGATTATAGA 57.312 33.333 0.00 0.00 0.00 1.98
2993 3968 8.904834 GGATAGTGAAGATTAGCGATAGGATTA 58.095 37.037 0.00 0.00 0.00 1.75
2994 3969 7.397476 TGGATAGTGAAGATTAGCGATAGGATT 59.603 37.037 0.00 0.00 0.00 3.01
2995 3970 6.892456 TGGATAGTGAAGATTAGCGATAGGAT 59.108 38.462 0.00 0.00 0.00 3.24
2996 3971 6.246163 TGGATAGTGAAGATTAGCGATAGGA 58.754 40.000 0.00 0.00 0.00 2.94
2997 3972 6.516739 TGGATAGTGAAGATTAGCGATAGG 57.483 41.667 0.00 0.00 0.00 2.57
2998 3973 7.867909 TGTTTGGATAGTGAAGATTAGCGATAG 59.132 37.037 0.00 0.00 0.00 2.08
2999 3974 7.722363 TGTTTGGATAGTGAAGATTAGCGATA 58.278 34.615 0.00 0.00 0.00 2.92
3000 3975 6.582636 TGTTTGGATAGTGAAGATTAGCGAT 58.417 36.000 0.00 0.00 0.00 4.58
3001 3976 5.972935 TGTTTGGATAGTGAAGATTAGCGA 58.027 37.500 0.00 0.00 0.00 4.93
3002 3977 6.478588 GTTGTTTGGATAGTGAAGATTAGCG 58.521 40.000 0.00 0.00 0.00 4.26
3003 3978 6.478588 CGTTGTTTGGATAGTGAAGATTAGC 58.521 40.000 0.00 0.00 0.00 3.09
3004 3979 6.456988 GGCGTTGTTTGGATAGTGAAGATTAG 60.457 42.308 0.00 0.00 0.00 1.73
3005 3980 5.353123 GGCGTTGTTTGGATAGTGAAGATTA 59.647 40.000 0.00 0.00 0.00 1.75
3006 3981 4.156008 GGCGTTGTTTGGATAGTGAAGATT 59.844 41.667 0.00 0.00 0.00 2.40
3007 3982 3.689649 GGCGTTGTTTGGATAGTGAAGAT 59.310 43.478 0.00 0.00 0.00 2.40
3008 3983 3.071479 GGCGTTGTTTGGATAGTGAAGA 58.929 45.455 0.00 0.00 0.00 2.87
3009 3984 3.074412 AGGCGTTGTTTGGATAGTGAAG 58.926 45.455 0.00 0.00 0.00 3.02
3010 3985 3.134574 AGGCGTTGTTTGGATAGTGAA 57.865 42.857 0.00 0.00 0.00 3.18
3011 3986 2.851263 AGGCGTTGTTTGGATAGTGA 57.149 45.000 0.00 0.00 0.00 3.41
3012 3987 3.374058 CCTAAGGCGTTGTTTGGATAGTG 59.626 47.826 0.97 0.00 0.00 2.74
3013 3988 3.606687 CCTAAGGCGTTGTTTGGATAGT 58.393 45.455 0.97 0.00 0.00 2.12
3014 3989 2.943033 CCCTAAGGCGTTGTTTGGATAG 59.057 50.000 0.97 0.00 0.00 2.08
3015 3990 2.993937 CCCTAAGGCGTTGTTTGGATA 58.006 47.619 0.97 0.00 0.00 2.59
3016 3991 1.834188 CCCTAAGGCGTTGTTTGGAT 58.166 50.000 0.97 0.00 0.00 3.41
3017 3992 3.332706 CCCTAAGGCGTTGTTTGGA 57.667 52.632 0.97 0.00 0.00 3.53
3035 4010 7.275560 CCAATTTATGTAGGTGTAGCAAAAAGC 59.724 37.037 0.00 0.00 46.19 3.51
3036 4011 8.303876 ACCAATTTATGTAGGTGTAGCAAAAAG 58.696 33.333 0.00 0.00 32.04 2.27
3037 4012 8.184304 ACCAATTTATGTAGGTGTAGCAAAAA 57.816 30.769 0.00 0.00 32.04 1.94
3038 4013 7.768807 ACCAATTTATGTAGGTGTAGCAAAA 57.231 32.000 0.00 0.00 32.04 2.44
3039 4014 7.768807 AACCAATTTATGTAGGTGTAGCAAA 57.231 32.000 0.00 0.00 33.93 3.68
3040 4015 7.768807 AAACCAATTTATGTAGGTGTAGCAA 57.231 32.000 0.00 0.00 33.93 3.91
3041 4016 7.064847 CGTAAACCAATTTATGTAGGTGTAGCA 59.935 37.037 0.00 0.00 34.03 3.49
3042 4017 7.064966 ACGTAAACCAATTTATGTAGGTGTAGC 59.935 37.037 3.41 0.00 44.93 3.58
3043 4018 8.483307 ACGTAAACCAATTTATGTAGGTGTAG 57.517 34.615 3.41 0.00 44.93 2.74
3052 4027 8.524466 CGTAAAGCTACGTAAACCAATTTATG 57.476 34.615 0.74 0.00 44.79 1.90
3067 4042 0.721718 CAGCCAGCACGTAAAGCTAC 59.278 55.000 0.00 0.00 41.14 3.58
3068 4043 0.606096 TCAGCCAGCACGTAAAGCTA 59.394 50.000 0.00 0.00 41.14 3.32
3069 4044 0.951040 GTCAGCCAGCACGTAAAGCT 60.951 55.000 0.00 0.00 44.62 3.74
3070 4045 0.951040 AGTCAGCCAGCACGTAAAGC 60.951 55.000 0.00 0.00 0.00 3.51
3071 4046 1.195448 CAAGTCAGCCAGCACGTAAAG 59.805 52.381 0.00 0.00 0.00 1.85
3072 4047 1.225855 CAAGTCAGCCAGCACGTAAA 58.774 50.000 0.00 0.00 0.00 2.01
3073 4048 0.602638 CCAAGTCAGCCAGCACGTAA 60.603 55.000 0.00 0.00 0.00 3.18
3074 4049 1.005037 CCAAGTCAGCCAGCACGTA 60.005 57.895 0.00 0.00 0.00 3.57
3075 4050 2.281070 CCAAGTCAGCCAGCACGT 60.281 61.111 0.00 0.00 0.00 4.49
3076 4051 3.052082 CCCAAGTCAGCCAGCACG 61.052 66.667 0.00 0.00 0.00 5.34
3077 4052 2.469465 TAGCCCAAGTCAGCCAGCAC 62.469 60.000 0.00 0.00 0.00 4.40
3078 4053 1.778017 TTAGCCCAAGTCAGCCAGCA 61.778 55.000 0.00 0.00 0.00 4.41
3079 4054 0.394899 ATTAGCCCAAGTCAGCCAGC 60.395 55.000 0.00 0.00 0.00 4.85
3080 4055 1.211457 AGATTAGCCCAAGTCAGCCAG 59.789 52.381 0.00 0.00 0.00 4.85
3081 4056 1.065199 CAGATTAGCCCAAGTCAGCCA 60.065 52.381 0.00 0.00 0.00 4.75
3082 4057 1.210478 TCAGATTAGCCCAAGTCAGCC 59.790 52.381 0.00 0.00 0.00 4.85
3083 4058 2.698855 TCAGATTAGCCCAAGTCAGC 57.301 50.000 0.00 0.00 0.00 4.26
3084 4059 3.881688 CCAATCAGATTAGCCCAAGTCAG 59.118 47.826 0.00 0.00 0.00 3.51
3085 4060 3.523157 TCCAATCAGATTAGCCCAAGTCA 59.477 43.478 0.00 0.00 0.00 3.41
3086 4061 4.156455 TCCAATCAGATTAGCCCAAGTC 57.844 45.455 0.00 0.00 0.00 3.01
3087 4062 4.530875 CTTCCAATCAGATTAGCCCAAGT 58.469 43.478 0.00 0.00 0.00 3.16
3088 4063 3.887716 CCTTCCAATCAGATTAGCCCAAG 59.112 47.826 0.00 0.00 0.00 3.61
3089 4064 3.527253 TCCTTCCAATCAGATTAGCCCAA 59.473 43.478 0.00 0.00 0.00 4.12
3090 4065 3.122480 TCCTTCCAATCAGATTAGCCCA 58.878 45.455 0.00 0.00 0.00 5.36
3091 4066 3.864789 TCCTTCCAATCAGATTAGCCC 57.135 47.619 0.00 0.00 0.00 5.19
3092 4067 6.721704 ATTTTCCTTCCAATCAGATTAGCC 57.278 37.500 0.00 0.00 0.00 3.93
3093 4068 9.125026 TCTAATTTTCCTTCCAATCAGATTAGC 57.875 33.333 0.00 0.00 0.00 3.09
3095 4070 9.408648 GGTCTAATTTTCCTTCCAATCAGATTA 57.591 33.333 0.00 0.00 0.00 1.75
3096 4071 7.343057 GGGTCTAATTTTCCTTCCAATCAGATT 59.657 37.037 0.00 0.00 0.00 2.40
3097 4072 6.836007 GGGTCTAATTTTCCTTCCAATCAGAT 59.164 38.462 0.00 0.00 0.00 2.90
3098 4073 6.187682 GGGTCTAATTTTCCTTCCAATCAGA 58.812 40.000 0.00 0.00 0.00 3.27
3099 4074 5.951747 TGGGTCTAATTTTCCTTCCAATCAG 59.048 40.000 0.00 0.00 0.00 2.90
3100 4075 5.898120 TGGGTCTAATTTTCCTTCCAATCA 58.102 37.500 0.00 0.00 0.00 2.57
3101 4076 6.850752 TTGGGTCTAATTTTCCTTCCAATC 57.149 37.500 0.00 0.00 0.00 2.67
3102 4077 6.013725 GGTTTGGGTCTAATTTTCCTTCCAAT 60.014 38.462 0.00 0.00 33.73 3.16
3103 4078 5.305902 GGTTTGGGTCTAATTTTCCTTCCAA 59.694 40.000 0.00 0.00 0.00 3.53
3104 4079 4.836175 GGTTTGGGTCTAATTTTCCTTCCA 59.164 41.667 0.00 0.00 0.00 3.53
3105 4080 4.222145 GGGTTTGGGTCTAATTTTCCTTCC 59.778 45.833 0.00 0.00 0.00 3.46
3106 4081 4.836175 TGGGTTTGGGTCTAATTTTCCTTC 59.164 41.667 0.00 0.00 0.00 3.46
3107 4082 4.591498 GTGGGTTTGGGTCTAATTTTCCTT 59.409 41.667 0.00 0.00 0.00 3.36
3108 4083 4.157246 GTGGGTTTGGGTCTAATTTTCCT 58.843 43.478 0.00 0.00 0.00 3.36
3109 4084 3.898741 TGTGGGTTTGGGTCTAATTTTCC 59.101 43.478 0.00 0.00 0.00 3.13
3110 4085 4.262292 GGTGTGGGTTTGGGTCTAATTTTC 60.262 45.833 0.00 0.00 0.00 2.29
3111 4086 3.644265 GGTGTGGGTTTGGGTCTAATTTT 59.356 43.478 0.00 0.00 0.00 1.82
3112 4087 3.236047 GGTGTGGGTTTGGGTCTAATTT 58.764 45.455 0.00 0.00 0.00 1.82
3113 4088 2.816337 CGGTGTGGGTTTGGGTCTAATT 60.816 50.000 0.00 0.00 0.00 1.40
3114 4089 1.271707 CGGTGTGGGTTTGGGTCTAAT 60.272 52.381 0.00 0.00 0.00 1.73
3115 4090 0.108963 CGGTGTGGGTTTGGGTCTAA 59.891 55.000 0.00 0.00 0.00 2.10
3116 4091 1.055551 ACGGTGTGGGTTTGGGTCTA 61.056 55.000 0.00 0.00 0.00 2.59
3117 4092 1.055551 TACGGTGTGGGTTTGGGTCT 61.056 55.000 0.00 0.00 0.00 3.85
3118 4093 0.179023 TTACGGTGTGGGTTTGGGTC 60.179 55.000 0.00 0.00 0.00 4.46
3119 4094 0.258194 TTTACGGTGTGGGTTTGGGT 59.742 50.000 0.00 0.00 0.00 4.51
3120 4095 1.067364 GTTTTACGGTGTGGGTTTGGG 59.933 52.381 0.00 0.00 0.00 4.12
3121 4096 2.025898 AGTTTTACGGTGTGGGTTTGG 58.974 47.619 0.00 0.00 0.00 3.28
3122 4097 2.683867 TGAGTTTTACGGTGTGGGTTTG 59.316 45.455 0.00 0.00 0.00 2.93
3123 4098 2.946990 CTGAGTTTTACGGTGTGGGTTT 59.053 45.455 0.00 0.00 0.00 3.27
3124 4099 2.567985 CTGAGTTTTACGGTGTGGGTT 58.432 47.619 0.00 0.00 0.00 4.11
3125 4100 1.202722 CCTGAGTTTTACGGTGTGGGT 60.203 52.381 0.00 0.00 0.00 4.51
3126 4101 1.519408 CCTGAGTTTTACGGTGTGGG 58.481 55.000 0.00 0.00 0.00 4.61
3127 4102 1.519408 CCCTGAGTTTTACGGTGTGG 58.481 55.000 0.00 0.00 0.00 4.17
3128 4103 1.202722 ACCCCTGAGTTTTACGGTGTG 60.203 52.381 0.00 0.00 0.00 3.82
3129 4104 1.134228 ACCCCTGAGTTTTACGGTGT 58.866 50.000 0.00 0.00 0.00 4.16
3130 4105 2.265589 AACCCCTGAGTTTTACGGTG 57.734 50.000 0.00 0.00 0.00 4.94
3131 4106 3.647590 TCTAAACCCCTGAGTTTTACGGT 59.352 43.478 0.00 0.00 40.38 4.83
3132 4107 4.020839 TCTCTAAACCCCTGAGTTTTACGG 60.021 45.833 0.00 0.00 40.38 4.02
3133 4108 5.143376 TCTCTAAACCCCTGAGTTTTACG 57.857 43.478 0.00 0.00 40.38 3.18
3134 4109 5.247792 TCCTCTCTAAACCCCTGAGTTTTAC 59.752 44.000 0.00 0.00 40.38 2.01
3135 4110 5.408824 TCCTCTCTAAACCCCTGAGTTTTA 58.591 41.667 0.00 0.00 40.38 1.52
3136 4111 4.240323 TCCTCTCTAAACCCCTGAGTTTT 58.760 43.478 0.00 0.00 40.38 2.43
3137 4112 3.870559 TCCTCTCTAAACCCCTGAGTTT 58.129 45.455 0.00 0.00 42.47 2.66
3138 4113 3.562108 TCCTCTCTAAACCCCTGAGTT 57.438 47.619 0.00 0.00 0.00 3.01
3139 4114 3.786213 ATCCTCTCTAAACCCCTGAGT 57.214 47.619 0.00 0.00 0.00 3.41
3140 4115 5.068215 TCTATCCTCTCTAAACCCCTGAG 57.932 47.826 0.00 0.00 0.00 3.35
3141 4116 5.209659 GTTCTATCCTCTCTAAACCCCTGA 58.790 45.833 0.00 0.00 0.00 3.86
3142 4117 4.962995 TGTTCTATCCTCTCTAAACCCCTG 59.037 45.833 0.00 0.00 0.00 4.45
3143 4118 5.222278 TGTTCTATCCTCTCTAAACCCCT 57.778 43.478 0.00 0.00 0.00 4.79
3144 4119 6.211785 CCTATGTTCTATCCTCTCTAAACCCC 59.788 46.154 0.00 0.00 0.00 4.95
3145 4120 6.783482 ACCTATGTTCTATCCTCTCTAAACCC 59.217 42.308 0.00 0.00 0.00 4.11
3146 4121 7.842887 ACCTATGTTCTATCCTCTCTAAACC 57.157 40.000 0.00 0.00 0.00 3.27
3149 4124 9.064706 CGTAAACCTATGTTCTATCCTCTCTAA 57.935 37.037 0.00 0.00 32.15 2.10
3150 4125 8.216423 ACGTAAACCTATGTTCTATCCTCTCTA 58.784 37.037 0.00 0.00 32.15 2.43
3151 4126 7.061688 ACGTAAACCTATGTTCTATCCTCTCT 58.938 38.462 0.00 0.00 32.15 3.10
3152 4127 7.274603 ACGTAAACCTATGTTCTATCCTCTC 57.725 40.000 0.00 0.00 32.15 3.20
3153 4128 7.447853 CCTACGTAAACCTATGTTCTATCCTCT 59.552 40.741 0.00 0.00 32.15 3.69
3154 4129 7.230309 ACCTACGTAAACCTATGTTCTATCCTC 59.770 40.741 0.00 0.00 32.15 3.71
3155 4130 7.065504 ACCTACGTAAACCTATGTTCTATCCT 58.934 38.462 0.00 0.00 32.15 3.24
3156 4131 7.282332 ACCTACGTAAACCTATGTTCTATCC 57.718 40.000 0.00 0.00 32.15 2.59
3157 4132 8.408601 TCAACCTACGTAAACCTATGTTCTATC 58.591 37.037 0.00 0.00 32.15 2.08
3158 4133 8.297470 TCAACCTACGTAAACCTATGTTCTAT 57.703 34.615 0.00 0.00 32.15 1.98
3159 4134 7.701539 TCAACCTACGTAAACCTATGTTCTA 57.298 36.000 0.00 0.00 32.15 2.10
3160 4135 6.594788 TCAACCTACGTAAACCTATGTTCT 57.405 37.500 0.00 0.00 32.15 3.01
3161 4136 7.838771 AATCAACCTACGTAAACCTATGTTC 57.161 36.000 0.00 0.00 32.15 3.18
3162 4137 7.489113 CGTAATCAACCTACGTAAACCTATGTT 59.511 37.037 0.00 0.00 37.85 2.71
3163 4138 6.974622 CGTAATCAACCTACGTAAACCTATGT 59.025 38.462 0.00 0.00 37.85 2.29
3164 4139 7.385668 CGTAATCAACCTACGTAAACCTATG 57.614 40.000 0.00 0.00 37.85 2.23
3174 4149 4.889832 AGACCTACGTAATCAACCTACG 57.110 45.455 8.72 1.12 45.93 3.51
3175 4150 5.297776 TGCTAGACCTACGTAATCAACCTAC 59.702 44.000 8.72 0.00 0.00 3.18
3176 4151 5.439721 TGCTAGACCTACGTAATCAACCTA 58.560 41.667 8.72 0.13 0.00 3.08
3177 4152 4.275810 TGCTAGACCTACGTAATCAACCT 58.724 43.478 8.72 0.00 0.00 3.50
3178 4153 4.644103 TGCTAGACCTACGTAATCAACC 57.356 45.455 8.72 0.00 0.00 3.77
3179 4154 8.700644 CAATAATGCTAGACCTACGTAATCAAC 58.299 37.037 8.72 0.12 0.00 3.18
3180 4155 7.870954 CCAATAATGCTAGACCTACGTAATCAA 59.129 37.037 8.72 0.00 0.00 2.57
3181 4156 7.375834 CCAATAATGCTAGACCTACGTAATCA 58.624 38.462 8.72 0.00 0.00 2.57
3182 4157 6.812160 CCCAATAATGCTAGACCTACGTAATC 59.188 42.308 0.00 0.00 0.00 1.75
3183 4158 6.269307 ACCCAATAATGCTAGACCTACGTAAT 59.731 38.462 0.00 0.00 0.00 1.89
3184 4159 5.599656 ACCCAATAATGCTAGACCTACGTAA 59.400 40.000 0.00 0.00 0.00 3.18
3185 4160 5.142639 ACCCAATAATGCTAGACCTACGTA 58.857 41.667 0.00 0.00 0.00 3.57
3186 4161 3.965347 ACCCAATAATGCTAGACCTACGT 59.035 43.478 0.00 0.00 0.00 3.57
3187 4162 4.602340 ACCCAATAATGCTAGACCTACG 57.398 45.455 0.00 0.00 0.00 3.51
3188 4163 5.681639 ACAACCCAATAATGCTAGACCTAC 58.318 41.667 0.00 0.00 0.00 3.18
3189 4164 5.968676 ACAACCCAATAATGCTAGACCTA 57.031 39.130 0.00 0.00 0.00 3.08
3190 4165 4.862641 ACAACCCAATAATGCTAGACCT 57.137 40.909 0.00 0.00 0.00 3.85
3191 4166 5.914898 AAACAACCCAATAATGCTAGACC 57.085 39.130 0.00 0.00 0.00 3.85
3192 4167 8.129211 GTGATAAACAACCCAATAATGCTAGAC 58.871 37.037 0.00 0.00 0.00 2.59
3193 4168 8.052748 AGTGATAAACAACCCAATAATGCTAGA 58.947 33.333 0.00 0.00 0.00 2.43
3194 4169 8.225603 AGTGATAAACAACCCAATAATGCTAG 57.774 34.615 0.00 0.00 0.00 3.42
3195 4170 8.052748 AGAGTGATAAACAACCCAATAATGCTA 58.947 33.333 0.00 0.00 0.00 3.49
3196 4171 6.891908 AGAGTGATAAACAACCCAATAATGCT 59.108 34.615 0.00 0.00 0.00 3.79
3322 4301 3.428452 CCACATGAGATGAATGTTGTGGC 60.428 47.826 0.00 0.00 45.20 5.01
3323 4302 4.365899 CCACATGAGATGAATGTTGTGG 57.634 45.455 0.00 5.59 45.59 4.17
3329 4308 2.617308 GGAGTGCCACATGAGATGAATG 59.383 50.000 0.00 0.00 0.00 2.67
3330 4309 2.508716 AGGAGTGCCACATGAGATGAAT 59.491 45.455 0.00 0.00 36.29 2.57
3337 4316 5.894298 ATTATCTTAGGAGTGCCACATGA 57.106 39.130 0.00 0.00 36.29 3.07
3363 4342 4.035112 AGATTGAATGGGTGCATTCCAAT 58.965 39.130 14.40 7.46 39.99 3.16
3382 4361 1.226542 CTCACATGGGGCTGCAGAT 59.773 57.895 20.43 0.00 0.00 2.90
3383 4362 1.782201 AACTCACATGGGGCTGCAGA 61.782 55.000 20.43 0.00 0.00 4.26
3385 4364 1.604308 CAACTCACATGGGGCTGCA 60.604 57.895 0.50 0.00 0.00 4.41
3386 4365 0.682209 ATCAACTCACATGGGGCTGC 60.682 55.000 0.00 0.00 0.00 5.25
3414 4393 3.756434 GCCTGTTACAAATGGAGCTACAA 59.244 43.478 0.66 0.00 0.00 2.41
3438 4421 1.003233 GTTGGTCTCTGGGCCAGTC 60.003 63.158 31.60 21.64 36.00 3.51
3440 4423 0.250513 GTAGTTGGTCTCTGGGCCAG 59.749 60.000 28.01 28.01 36.00 4.85
3454 4454 6.243216 TCACTTAACTTCTGGGTTGTAGTT 57.757 37.500 0.00 0.00 35.25 2.24
3458 4458 3.458487 ACCTCACTTAACTTCTGGGTTGT 59.542 43.478 0.00 0.00 0.00 3.32
3488 4488 6.716628 TGGCAGACAGTTGAAGAAAAGAATAT 59.283 34.615 0.00 0.00 0.00 1.28
3522 4522 5.841810 AGTTTGATCAAATTTTGAGCCGAA 58.158 33.333 23.05 14.25 45.05 4.30
3524 4524 5.164158 CGAAGTTTGATCAAATTTTGAGCCG 60.164 40.000 27.55 21.15 45.05 5.52
3557 4557 7.556844 TCACTTAACTTCTCTATTTGGCTAGG 58.443 38.462 0.00 0.00 0.00 3.02
3596 4596 7.801716 AGTGTTGCTTAACTTTCTGATTGTA 57.198 32.000 0.00 0.00 0.00 2.41
3600 4600 6.375455 CCCATAGTGTTGCTTAACTTTCTGAT 59.625 38.462 0.00 0.00 0.00 2.90
3601 4601 5.705441 CCCATAGTGTTGCTTAACTTTCTGA 59.295 40.000 0.00 0.00 0.00 3.27
3631 4631 7.916128 TTATTGAACCAACATTTGTTACACG 57.084 32.000 0.00 0.00 36.32 4.49
3651 4651 4.059773 TGGCCTTTGAGGGTGATTTATT 57.940 40.909 3.32 0.00 35.37 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.