Multiple sequence alignment - TraesCS4A01G084600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G084600 chr4A 100.000 4920 0 0 1 4920 89445407 89440488 0.000000e+00 9086
1 TraesCS4A01G084600 chr4B 92.152 2217 132 22 8 2192 462215245 462217451 0.000000e+00 3092
2 TraesCS4A01G084600 chr4B 88.905 694 19 20 2231 2908 462217451 462218102 0.000000e+00 802
3 TraesCS4A01G084600 chr4B 93.602 422 14 6 3376 3787 462218943 462219361 7.000000e-173 617
4 TraesCS4A01G084600 chr4B 86.975 476 34 12 4044 4505 462219607 462220068 1.220000e-140 510
5 TraesCS4A01G084600 chr4B 92.898 352 19 2 2905 3255 462218129 462218475 1.580000e-139 507
6 TraesCS4A01G084600 chr4D 92.543 1569 92 13 1350 2905 375124120 375125676 0.000000e+00 2226
7 TraesCS4A01G084600 chr4D 93.060 1340 71 10 6 1330 375122603 375123935 0.000000e+00 1940
8 TraesCS4A01G084600 chr4D 92.102 899 31 15 2905 3786 375125706 375126581 0.000000e+00 1230
9 TraesCS4A01G084600 chr4D 89.372 414 30 8 4510 4920 426602552 426602150 4.390000e-140 508
10 TraesCS4A01G084600 chr4D 86.279 481 45 11 3816 4279 375126569 375127045 2.040000e-138 503
11 TraesCS4A01G084600 chr4D 89.086 339 24 7 4510 4846 487286489 487286162 4.580000e-110 409
12 TraesCS4A01G084600 chr1D 88.862 413 33 6 4511 4920 352188940 352189342 3.420000e-136 496
13 TraesCS4A01G084600 chr1D 87.277 393 36 7 4511 4901 59531900 59532280 2.100000e-118 436
14 TraesCS4A01G084600 chr7D 88.620 413 34 6 4510 4920 136690452 136690853 1.590000e-134 490
15 TraesCS4A01G084600 chr7D 88.164 414 35 7 4510 4920 456720646 456720244 9.580000e-132 481
16 TraesCS4A01G084600 chr1A 88.378 413 36 5 4510 4920 557121031 557121433 2.060000e-133 486
17 TraesCS4A01G084600 chr1A 87.651 413 36 7 4511 4920 265644343 265643943 2.680000e-127 466
18 TraesCS4A01G084600 chr5D 87.923 414 38 7 4510 4920 318830360 318829956 1.240000e-130 477
19 TraesCS4A01G084600 chr5D 88.384 198 14 2 4510 4707 477023751 477023939 3.830000e-56 230
20 TraesCS4A01G084600 chr2A 87.893 413 38 5 4510 4919 535704606 535705009 4.460000e-130 475
21 TraesCS4A01G084600 chr2D 87.893 413 37 6 4511 4920 64598708 64599110 1.600000e-129 473
22 TraesCS4A01G084600 chr2D 83.430 344 27 8 4511 4848 193272267 193271948 4.820000e-75 292
23 TraesCS4A01G084600 chr7B 88.161 397 33 6 4528 4920 642836813 642836427 1.250000e-125 460
24 TraesCS4A01G084600 chr6A 83.602 372 40 9 4510 4875 543400132 543399776 3.670000e-86 329
25 TraesCS4A01G084600 chr6A 82.283 254 24 13 4505 4751 153513303 153513542 3.000000e-47 200
26 TraesCS4A01G084600 chr6D 82.353 255 26 11 4503 4751 343674270 343674511 2.320000e-48 204


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G084600 chr4A 89440488 89445407 4919 True 9086.00 9086 100.0000 1 4920 1 chr4A.!!$R1 4919
1 TraesCS4A01G084600 chr4B 462215245 462220068 4823 False 1105.60 3092 90.9064 8 4505 5 chr4B.!!$F1 4497
2 TraesCS4A01G084600 chr4D 375122603 375127045 4442 False 1474.75 2226 90.9960 6 4279 4 chr4D.!!$F1 4273

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
878 910 0.395686 GAACGATACCCCTTAGCCCC 59.604 60.000 0.00 0.0 0.00 5.80 F
2163 2373 0.106708 AACAGTGTGGCGTGATCTGT 59.893 50.000 0.00 0.0 40.40 3.41 F
2606 2822 1.144913 TGGTTTGAGCCTAGGTTTGCT 59.855 47.619 11.31 0.0 41.42 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2594 2810 0.321298 TTGGTCGAGCAAACCTAGGC 60.321 55.0 26.54 0.0 37.69 3.93 R
3697 4331 0.114168 TGGGCCAGCCTATTGTTGTT 59.886 50.0 0.00 0.0 36.10 2.83 R
4205 4906 0.029300 ACATGCGTGACAAACAGCAC 59.971 50.0 14.17 0.0 39.77 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 115 2.427453 AGCACGACAAGTATGGAGTAGG 59.573 50.000 0.00 0.00 0.00 3.18
149 150 6.321821 AGTGGGATGTAGTAATAGCCAAAA 57.678 37.500 0.00 0.00 0.00 2.44
150 151 6.120220 AGTGGGATGTAGTAATAGCCAAAAC 58.880 40.000 0.00 0.00 0.00 2.43
173 174 1.453015 ACCGCTGCAAGAACACCAA 60.453 52.632 0.00 0.00 34.07 3.67
216 221 5.488341 TCTAAAGCCACAATCAGGTAGTTC 58.512 41.667 0.00 0.00 0.00 3.01
217 222 4.373156 AAAGCCACAATCAGGTAGTTCT 57.627 40.909 0.00 0.00 0.00 3.01
224 229 5.582269 CCACAATCAGGTAGTTCTACATGTG 59.418 44.000 19.23 14.93 33.89 3.21
225 230 5.063944 CACAATCAGGTAGTTCTACATGTGC 59.936 44.000 19.23 0.00 33.89 4.57
229 234 5.804639 TCAGGTAGTTCTACATGTGCAATT 58.195 37.500 19.23 0.35 33.89 2.32
232 237 3.855689 AGTTCTACATGTGCAATTGGC 57.144 42.857 9.11 0.15 45.13 4.52
393 403 4.532521 AGTACATAAAAGAGCACAGACCCT 59.467 41.667 0.00 0.00 0.00 4.34
490 509 1.355916 GGGCGCGTACAGAGAGTAG 59.644 63.158 8.43 0.00 32.19 2.57
499 518 1.551452 ACAGAGAGTAGACCAGCACC 58.449 55.000 0.00 0.00 0.00 5.01
758 778 2.682352 GCTGGAGAAGAAATCTGGCTTC 59.318 50.000 0.00 0.00 38.96 3.86
845 877 8.188799 GGTAAATTAGCAAATACACCCTTTCTC 58.811 37.037 0.00 0.00 0.00 2.87
860 892 5.221925 ACCCTTTCTCTGAAGCTTATTGTGA 60.222 40.000 0.00 0.00 0.00 3.58
863 895 5.845985 TTCTCTGAAGCTTATTGTGAACG 57.154 39.130 0.00 0.00 0.00 3.95
878 910 0.395686 GAACGATACCCCTTAGCCCC 59.604 60.000 0.00 0.00 0.00 5.80
880 912 2.748350 GATACCCCTTAGCCCCGC 59.252 66.667 0.00 0.00 0.00 6.13
883 915 1.705997 ATACCCCTTAGCCCCGCAAG 61.706 60.000 0.00 0.00 0.00 4.01
898 930 1.630126 GCAAGGCCTCAGGGATCTGA 61.630 60.000 5.23 0.00 46.81 3.27
910 942 2.507471 AGGGATCTGAGCCGAAGAAAAT 59.493 45.455 5.78 0.00 0.00 1.82
935 967 2.123897 GGCGGGGGTTATGTGCAT 60.124 61.111 0.00 0.00 0.00 3.96
938 970 1.394618 GCGGGGGTTATGTGCATAAA 58.605 50.000 6.24 0.00 35.30 1.40
940 972 2.223711 GCGGGGGTTATGTGCATAAAAG 60.224 50.000 6.24 0.00 35.30 2.27
943 975 2.763448 GGGGTTATGTGCATAAAAGCCA 59.237 45.455 20.60 1.64 35.30 4.75
944 976 3.430236 GGGGTTATGTGCATAAAAGCCAC 60.430 47.826 20.60 8.04 35.30 5.01
947 979 5.449999 GGGTTATGTGCATAAAAGCCACTAC 60.450 44.000 16.57 0.68 35.30 2.73
967 999 0.606604 TTTCCGCTTTCGCTCCTAGT 59.393 50.000 0.00 0.00 0.00 2.57
1119 1152 3.371097 GAAGATGGAGGGCGTCGCA 62.371 63.158 20.50 0.00 0.00 5.10
1221 1254 2.492088 CACCCGTACACATCTCTCTTCA 59.508 50.000 0.00 0.00 0.00 3.02
1231 1264 4.634883 CACATCTCTCTTCATTCACCCTTG 59.365 45.833 0.00 0.00 0.00 3.61
1233 1266 5.485353 ACATCTCTCTTCATTCACCCTTGTA 59.515 40.000 0.00 0.00 0.00 2.41
1234 1267 5.407407 TCTCTCTTCATTCACCCTTGTAC 57.593 43.478 0.00 0.00 0.00 2.90
1247 1280 7.549147 TCACCCTTGTACTACTTGTTTATCT 57.451 36.000 0.00 0.00 0.00 1.98
1305 1338 1.817099 GGCTCCAACTGCATCTCGG 60.817 63.158 0.00 0.00 0.00 4.63
1309 1342 0.674581 TCCAACTGCATCTCGGCTTG 60.675 55.000 0.00 0.00 34.04 4.01
1361 1559 3.124578 TGTTCAGCACAAGTGATAGCA 57.875 42.857 4.04 0.00 29.87 3.49
1473 1671 4.453478 CCAGTGCTGTGTAATATGCCATAG 59.547 45.833 0.00 0.00 0.00 2.23
1488 1686 3.181445 TGCCATAGCCTGTTACATTAGGG 60.181 47.826 0.00 0.00 38.69 3.53
1503 1701 6.057321 ACATTAGGGAGTCGGTATTTTTGA 57.943 37.500 0.00 0.00 0.00 2.69
1508 1706 5.186198 AGGGAGTCGGTATTTTTGATCTTG 58.814 41.667 0.00 0.00 0.00 3.02
1510 1708 5.163754 GGGAGTCGGTATTTTTGATCTTGTG 60.164 44.000 0.00 0.00 0.00 3.33
1541 1741 8.331730 TGAAGAATGATGCATAGTTGATATGG 57.668 34.615 0.00 0.00 41.49 2.74
1551 1752 8.382030 TGCATAGTTGATATGGTATGTTCTTG 57.618 34.615 0.00 0.00 41.49 3.02
1563 1764 8.862325 ATGGTATGTTCTTGATTGTACAAAGA 57.138 30.769 13.23 8.36 0.00 2.52
1586 1787 7.579726 AGATGAATTTATGTGCTTCTATTCGC 58.420 34.615 0.00 0.00 0.00 4.70
1588 1789 4.732285 ATTTATGTGCTTCTATTCGCCG 57.268 40.909 0.00 0.00 0.00 6.46
1606 1807 2.610232 GCCGTCCATTGTCTTTTGCAAT 60.610 45.455 0.00 0.00 37.06 3.56
1611 1812 4.211794 GTCCATTGTCTTTTGCAATTGTGG 59.788 41.667 7.40 2.83 34.68 4.17
1616 1818 4.619973 TGTCTTTTGCAATTGTGGACATC 58.380 39.130 7.40 0.00 0.00 3.06
1682 1884 6.787085 ATCTTTAGCTTATATTGCCGTGTC 57.213 37.500 0.00 0.00 0.00 3.67
1694 1896 3.430333 TGCCGTGTCCTTTTTCTTTTC 57.570 42.857 0.00 0.00 0.00 2.29
1761 1963 7.241042 AGATGATTACCGCCTTATAAAGCTA 57.759 36.000 4.61 0.00 0.00 3.32
1812 2014 4.072131 TGTTATGTTCTTCTCCACCAAGC 58.928 43.478 0.00 0.00 0.00 4.01
1824 2026 4.130118 CTCCACCAAGCATGTATTCTACC 58.870 47.826 0.00 0.00 0.00 3.18
1838 2040 9.347934 CATGTATTCTACCGACAGATTATCTTC 57.652 37.037 0.00 0.00 0.00 2.87
2147 2357 8.087982 TGTTGAATTTACTGTTTGCAAAAACA 57.912 26.923 14.67 13.22 40.05 2.83
2160 2370 2.384382 CAAAAACAGTGTGGCGTGATC 58.616 47.619 0.00 0.00 0.00 2.92
2163 2373 0.106708 AACAGTGTGGCGTGATCTGT 59.893 50.000 0.00 0.00 40.40 3.41
2183 2393 2.375014 TGATGCTCATGCCCATCAAT 57.625 45.000 19.37 0.00 43.34 2.57
2187 2397 4.650131 TGATGCTCATGCCCATCAATTTTA 59.350 37.500 19.37 2.78 43.34 1.52
2188 2398 4.659111 TGCTCATGCCCATCAATTTTAG 57.341 40.909 0.00 0.00 38.71 1.85
2210 2420 6.425210 AGCTGGAAGTGCTGTTGATATATA 57.575 37.500 0.00 0.00 39.56 0.86
2299 2509 6.019640 CCATAACTGTGTTTTTGAAAGCACTG 60.020 38.462 20.35 20.35 46.25 3.66
2416 2632 3.340034 TGGTCCTTGTACGCTATTTTGG 58.660 45.455 0.00 0.00 0.00 3.28
2428 2644 8.426489 TGTACGCTATTTTGGGTATCTCTATTT 58.574 33.333 0.00 0.00 37.61 1.40
2523 2739 1.451567 CCTCACTGGCATGGAGCTG 60.452 63.158 9.38 0.00 44.79 4.24
2524 2740 2.045634 TCACTGGCATGGAGCTGC 60.046 61.111 0.00 0.00 44.79 5.25
2586 2802 1.425066 TCTGGCCTTCAGGATGTGTTT 59.575 47.619 3.32 0.00 43.53 2.83
2594 2810 4.261741 CCTTCAGGATGTGTTTGGTTTGAG 60.262 45.833 0.00 0.00 37.40 3.02
2606 2822 1.144913 TGGTTTGAGCCTAGGTTTGCT 59.855 47.619 11.31 0.00 41.42 3.91
2753 2972 3.377172 GCCATAAATCAAGCGTTACCTGT 59.623 43.478 0.00 0.00 0.00 4.00
2765 2984 5.589192 AGCGTTACCTGTATGAATAGACAC 58.411 41.667 0.00 0.00 0.00 3.67
3014 3298 5.529060 GGGAGGCAAAGTAGATGAACTATTG 59.471 44.000 0.00 0.00 33.39 1.90
3256 3541 8.382405 TGCATGGGTTATGAACTATATGTACAT 58.618 33.333 13.93 13.93 39.21 2.29
3257 3542 9.884636 GCATGGGTTATGAACTATATGTACATA 57.115 33.333 17.65 17.65 39.21 2.29
3260 3545 9.081204 TGGGTTATGAACTATATGTACATACGT 57.919 33.333 17.69 14.27 0.00 3.57
3332 3901 7.829725 TGCTGTGTTGCTTGATAAAAGATTAT 58.170 30.769 0.00 0.00 34.40 1.28
3434 4067 5.880332 TGTTCTCCTTATGCAAACACTATCC 59.120 40.000 0.00 0.00 0.00 2.59
3464 4097 1.804748 GGGAAGATGACGTTGTTGGAC 59.195 52.381 0.00 0.00 0.00 4.02
3686 4320 5.355350 GGATGGCATTAGTAAGCATGGATAC 59.645 44.000 0.00 0.00 0.00 2.24
3697 4331 5.939764 AAGCATGGATACTGAGTTACTGA 57.060 39.130 0.00 0.00 37.61 3.41
3701 4340 5.874810 GCATGGATACTGAGTTACTGAACAA 59.125 40.000 0.00 0.00 36.09 2.83
3718 4366 1.273211 ACAACAATAGGCTGGCCCATT 60.273 47.619 8.11 3.65 36.58 3.16
3724 4372 0.628522 TAGGCTGGCCCATTTGCTAA 59.371 50.000 8.11 0.00 36.58 3.09
3726 4374 1.257055 GGCTGGCCCATTTGCTAACA 61.257 55.000 0.00 0.00 0.00 2.41
3746 4394 7.095187 GCTAACAAGTCTGCACTATAAACAACT 60.095 37.037 0.00 0.00 30.14 3.16
3775 4423 3.706594 GTGGATTCCTGATGTCTGTCCTA 59.293 47.826 3.95 0.00 0.00 2.94
3776 4424 4.346418 GTGGATTCCTGATGTCTGTCCTAT 59.654 45.833 3.95 0.00 0.00 2.57
3777 4425 4.971282 TGGATTCCTGATGTCTGTCCTATT 59.029 41.667 3.95 0.00 0.00 1.73
3778 4426 6.042093 GTGGATTCCTGATGTCTGTCCTATTA 59.958 42.308 3.95 0.00 0.00 0.98
3779 4427 6.268617 TGGATTCCTGATGTCTGTCCTATTAG 59.731 42.308 3.95 0.00 0.00 1.73
3780 4428 5.537300 TTCCTGATGTCTGTCCTATTAGC 57.463 43.478 0.00 0.00 0.00 3.09
3781 4429 4.809193 TCCTGATGTCTGTCCTATTAGCT 58.191 43.478 0.00 0.00 0.00 3.32
3782 4430 4.830046 TCCTGATGTCTGTCCTATTAGCTC 59.170 45.833 0.00 0.00 0.00 4.09
3783 4431 4.586421 CCTGATGTCTGTCCTATTAGCTCA 59.414 45.833 0.00 0.00 0.00 4.26
3784 4432 5.245751 CCTGATGTCTGTCCTATTAGCTCAT 59.754 44.000 0.00 0.00 0.00 2.90
3785 4433 6.239543 CCTGATGTCTGTCCTATTAGCTCATT 60.240 42.308 0.00 0.00 0.00 2.57
3786 4434 6.753180 TGATGTCTGTCCTATTAGCTCATTC 58.247 40.000 0.00 0.00 0.00 2.67
3787 4435 6.324770 TGATGTCTGTCCTATTAGCTCATTCA 59.675 38.462 0.00 0.00 0.00 2.57
3788 4436 6.737720 TGTCTGTCCTATTAGCTCATTCAT 57.262 37.500 0.00 0.00 0.00 2.57
3789 4437 7.129457 TGTCTGTCCTATTAGCTCATTCATT 57.871 36.000 0.00 0.00 0.00 2.57
3790 4438 7.568349 TGTCTGTCCTATTAGCTCATTCATTT 58.432 34.615 0.00 0.00 0.00 2.32
3791 4439 8.704668 TGTCTGTCCTATTAGCTCATTCATTTA 58.295 33.333 0.00 0.00 0.00 1.40
3792 4440 9.717942 GTCTGTCCTATTAGCTCATTCATTTAT 57.282 33.333 0.00 0.00 0.00 1.40
3793 4441 9.935241 TCTGTCCTATTAGCTCATTCATTTATC 57.065 33.333 0.00 0.00 0.00 1.75
3794 4442 9.941325 CTGTCCTATTAGCTCATTCATTTATCT 57.059 33.333 0.00 0.00 0.00 1.98
3804 4452 9.629878 AGCTCATTCATTTATCTTTTGAGAGAT 57.370 29.630 0.00 0.00 39.59 2.75
3805 4453 9.666626 GCTCATTCATTTATCTTTTGAGAGATG 57.333 33.333 0.00 0.00 37.01 2.90
3815 4463 5.964758 TCTTTTGAGAGATGAGAGAGAAGC 58.035 41.667 0.00 0.00 0.00 3.86
3816 4464 5.716228 TCTTTTGAGAGATGAGAGAGAAGCT 59.284 40.000 0.00 0.00 0.00 3.74
3817 4465 6.889177 TCTTTTGAGAGATGAGAGAGAAGCTA 59.111 38.462 0.00 0.00 0.00 3.32
3868 4516 2.904434 AGTAAACACGGGGAAGATGAGT 59.096 45.455 0.00 0.00 0.00 3.41
3874 4522 2.297597 CACGGGGAAGATGAGTATCTCC 59.702 54.545 0.00 0.00 42.80 3.71
3886 4534 2.891580 GAGTATCTCCGGCATCAACCTA 59.108 50.000 0.00 0.00 0.00 3.08
3910 4558 2.750888 GGACGATGAACCAAGCGGC 61.751 63.158 0.00 0.00 34.57 6.53
3932 4580 0.788995 CAGCTGAGAGCAGAAACACG 59.211 55.000 8.42 0.00 45.56 4.49
3939 4587 2.607635 GAGAGCAGAAACACGTTGTCAA 59.392 45.455 0.00 0.00 0.00 3.18
3959 4609 0.531090 TGTGTTAGCTGCGACGGTTT 60.531 50.000 0.00 0.00 0.00 3.27
3962 4612 0.714439 GTTAGCTGCGACGGTTTCTC 59.286 55.000 0.00 0.00 0.00 2.87
3964 4614 0.109272 TAGCTGCGACGGTTTCTCTG 60.109 55.000 0.00 0.00 0.00 3.35
3972 4622 1.801913 CGGTTTCTCTGCCTCGTCG 60.802 63.158 0.00 0.00 0.00 5.12
4014 4668 0.531090 GTGTGTCGCTGTTACCCACA 60.531 55.000 0.00 0.00 33.92 4.17
4041 4695 5.840715 TGAGTTTTATGCAACAAATCAGCA 58.159 33.333 0.00 0.00 43.14 4.41
4060 4758 1.400142 CACTTGTGCACTTGAAACGGA 59.600 47.619 19.41 0.00 0.00 4.69
4066 4764 1.205064 CACTTGAAACGGAGCGCTG 59.795 57.895 18.48 3.12 0.00 5.18
4112 4811 1.589727 GTGTGTTGCTGTTGCTGCC 60.590 57.895 0.00 0.00 40.48 4.85
4128 4827 4.477413 CCTCTGGCATGATCCTGC 57.523 61.111 13.99 13.99 41.53 4.85
4134 4833 1.897615 GGCATGATCCTGCTGAGGC 60.898 63.158 20.37 0.00 41.95 4.70
4139 4838 0.179065 TGATCCTGCTGAGGCGATTG 60.179 55.000 0.00 0.00 39.57 2.67
4153 4852 1.734163 CGATTGTACACCCTTGGACC 58.266 55.000 0.00 0.00 35.37 4.46
4155 4854 2.498481 CGATTGTACACCCTTGGACCTA 59.502 50.000 0.00 0.00 35.37 3.08
4169 4870 1.546998 GGACCTAGGTTTGGTGTTGGG 60.547 57.143 17.53 0.00 38.03 4.12
4170 4871 1.144298 GACCTAGGTTTGGTGTTGGGT 59.856 52.381 17.53 0.00 38.03 4.51
4173 4874 0.186386 TAGGTTTGGTGTTGGGTGGG 59.814 55.000 0.00 0.00 0.00 4.61
4175 4876 2.444895 TTTGGTGTTGGGTGGGCC 60.445 61.111 0.00 0.00 0.00 5.80
4178 4879 2.203773 GGTGTTGGGTGGGCCATT 60.204 61.111 10.70 0.00 36.17 3.16
4245 4948 2.936202 ACGGGCAGATATCTTGCATTT 58.064 42.857 21.11 7.93 0.00 2.32
4268 4971 0.391597 GTTTCCTCACGGGTGACTGA 59.608 55.000 0.00 0.00 41.09 3.41
4279 4982 0.672342 GGTGACTGACTGTACGTGGT 59.328 55.000 0.00 0.00 0.00 4.16
4281 4984 0.589708 TGACTGACTGTACGTGGTCG 59.410 55.000 0.00 3.89 43.34 4.79
4356 5061 4.948080 ACCGTGAAGGGGGTCCGT 62.948 66.667 0.00 0.00 46.96 4.69
4357 5062 4.078516 CCGTGAAGGGGGTCCGTC 62.079 72.222 0.00 0.00 41.13 4.79
4358 5063 4.078516 CGTGAAGGGGGTCCGTCC 62.079 72.222 0.00 0.00 40.22 4.79
4359 5064 4.078516 GTGAAGGGGGTCCGTCCG 62.079 72.222 0.00 0.00 40.22 4.79
4366 5071 3.767806 GGGTCCGTCCGGGTTCTC 61.768 72.222 0.00 0.00 37.00 2.87
4432 5142 3.573598 CACGATCAGTATCTCTGCCATC 58.426 50.000 0.00 0.00 43.32 3.51
4438 5148 3.573967 TCAGTATCTCTGCCATCGCATTA 59.426 43.478 0.00 0.00 46.11 1.90
4445 5155 3.165071 TCTGCCATCGCATTAGATCCTA 58.835 45.455 0.00 0.00 46.11 2.94
4447 5157 4.956075 TCTGCCATCGCATTAGATCCTATA 59.044 41.667 0.00 0.00 46.11 1.31
4462 5172 5.650266 AGATCCTATAGAGTATCGTTGCCAG 59.350 44.000 0.00 0.00 42.67 4.85
4484 5197 3.120060 GGTACTACTATGTATCGGCACCG 60.120 52.174 1.73 1.73 41.35 4.94
4505 5219 1.744320 TATCCACGGCCATCAGACGG 61.744 60.000 2.24 0.00 0.00 4.79
4513 5227 3.955291 CCATCAGACGGCACTAGAG 57.045 57.895 0.00 0.00 0.00 2.43
4514 5228 0.249238 CCATCAGACGGCACTAGAGC 60.249 60.000 3.21 3.21 0.00 4.09
4515 5229 0.457443 CATCAGACGGCACTAGAGCA 59.543 55.000 14.31 0.00 35.83 4.26
4516 5230 1.134995 CATCAGACGGCACTAGAGCAA 60.135 52.381 14.31 0.00 35.83 3.91
4517 5231 0.243907 TCAGACGGCACTAGAGCAAC 59.756 55.000 14.31 4.71 35.83 4.17
4518 5232 0.244994 CAGACGGCACTAGAGCAACT 59.755 55.000 14.31 6.80 35.83 3.16
4519 5233 0.969894 AGACGGCACTAGAGCAACTT 59.030 50.000 14.31 0.00 35.83 2.66
4520 5234 1.067495 AGACGGCACTAGAGCAACTTC 60.067 52.381 14.31 4.34 35.83 3.01
4521 5235 0.679505 ACGGCACTAGAGCAACTTCA 59.320 50.000 14.31 0.00 35.83 3.02
4522 5236 1.070134 ACGGCACTAGAGCAACTTCAA 59.930 47.619 14.31 0.00 35.83 2.69
4523 5237 1.461127 CGGCACTAGAGCAACTTCAAC 59.539 52.381 14.31 0.00 35.83 3.18
4524 5238 1.461127 GGCACTAGAGCAACTTCAACG 59.539 52.381 14.31 0.00 35.83 4.10
4525 5239 1.461127 GCACTAGAGCAACTTCAACGG 59.539 52.381 7.33 0.00 0.00 4.44
4526 5240 2.069273 CACTAGAGCAACTTCAACGGG 58.931 52.381 0.00 0.00 0.00 5.28
4527 5241 1.002087 ACTAGAGCAACTTCAACGGGG 59.998 52.381 0.00 0.00 0.00 5.73
4528 5242 0.321298 TAGAGCAACTTCAACGGGGC 60.321 55.000 0.00 0.00 0.00 5.80
4529 5243 2.966309 GAGCAACTTCAACGGGGCG 61.966 63.158 0.00 0.00 0.00 6.13
4530 5244 2.975799 GCAACTTCAACGGGGCGA 60.976 61.111 0.00 0.00 0.00 5.54
4531 5245 2.332654 GCAACTTCAACGGGGCGAT 61.333 57.895 0.00 0.00 0.00 4.58
4532 5246 1.794222 CAACTTCAACGGGGCGATC 59.206 57.895 0.00 0.00 0.00 3.69
4533 5247 1.376812 AACTTCAACGGGGCGATCC 60.377 57.895 0.00 0.00 0.00 3.36
4534 5248 2.119484 AACTTCAACGGGGCGATCCA 62.119 55.000 0.00 0.00 37.22 3.41
4535 5249 1.153168 CTTCAACGGGGCGATCCAT 60.153 57.895 0.00 0.00 37.22 3.41
4536 5250 0.748005 CTTCAACGGGGCGATCCATT 60.748 55.000 0.00 0.00 37.22 3.16
4537 5251 0.322997 TTCAACGGGGCGATCCATTT 60.323 50.000 0.00 0.00 37.22 2.32
4538 5252 0.746563 TCAACGGGGCGATCCATTTC 60.747 55.000 0.00 0.00 37.22 2.17
4539 5253 1.817941 AACGGGGCGATCCATTTCG 60.818 57.895 0.00 0.00 41.99 3.46
4540 5254 2.203015 CGGGGCGATCCATTTCGT 60.203 61.111 0.00 0.00 41.16 3.85
4541 5255 2.244651 CGGGGCGATCCATTTCGTC 61.245 63.158 0.00 0.00 42.81 4.20
4543 5257 3.319904 GGCGATCCATTTCGTCCG 58.680 61.111 0.00 0.00 41.16 4.79
4544 5258 2.626455 GCGATCCATTTCGTCCGC 59.374 61.111 0.00 0.00 41.16 5.54
4545 5259 2.920869 CGATCCATTTCGTCCGCG 59.079 61.111 0.00 0.00 39.92 6.46
4546 5260 2.585869 CGATCCATTTCGTCCGCGG 61.586 63.158 22.12 22.12 38.89 6.46
4547 5261 2.882366 GATCCATTTCGTCCGCGGC 61.882 63.158 23.51 15.21 38.89 6.53
4567 5281 2.433491 TCCGTTTGGATCGGCGTG 60.433 61.111 6.85 0.00 46.49 5.34
4568 5282 3.496131 CCGTTTGGATCGGCGTGG 61.496 66.667 6.85 0.00 41.48 4.94
4569 5283 2.433491 CGTTTGGATCGGCGTGGA 60.433 61.111 6.85 0.00 0.00 4.02
4570 5284 2.736682 CGTTTGGATCGGCGTGGAC 61.737 63.158 6.85 0.00 0.00 4.02
4571 5285 1.669760 GTTTGGATCGGCGTGGACA 60.670 57.895 6.85 0.00 0.00 4.02
4572 5286 1.375396 TTTGGATCGGCGTGGACAG 60.375 57.895 6.85 0.00 0.00 3.51
4573 5287 1.822114 TTTGGATCGGCGTGGACAGA 61.822 55.000 6.85 0.00 0.00 3.41
4574 5288 1.822114 TTGGATCGGCGTGGACAGAA 61.822 55.000 6.85 0.00 0.00 3.02
4575 5289 1.079405 GGATCGGCGTGGACAGAAA 60.079 57.895 6.85 0.00 0.00 2.52
4576 5290 0.672401 GGATCGGCGTGGACAGAAAA 60.672 55.000 6.85 0.00 0.00 2.29
4577 5291 1.369625 GATCGGCGTGGACAGAAAAT 58.630 50.000 6.85 0.00 0.00 1.82
4578 5292 1.062587 GATCGGCGTGGACAGAAAATG 59.937 52.381 6.85 0.00 0.00 2.32
4579 5293 1.154225 CGGCGTGGACAGAAAATGC 60.154 57.895 0.00 0.00 0.00 3.56
4580 5294 1.154225 GGCGTGGACAGAAAATGCG 60.154 57.895 0.00 0.00 0.00 4.73
4581 5295 1.154225 GCGTGGACAGAAAATGCGG 60.154 57.895 0.00 0.00 0.00 5.69
4582 5296 1.154225 CGTGGACAGAAAATGCGGC 60.154 57.895 0.00 0.00 0.00 6.53
4583 5297 1.212751 GTGGACAGAAAATGCGGCC 59.787 57.895 0.00 0.00 0.00 6.13
4584 5298 1.074775 TGGACAGAAAATGCGGCCT 59.925 52.632 0.00 0.00 0.00 5.19
4585 5299 0.326595 TGGACAGAAAATGCGGCCTA 59.673 50.000 0.00 0.00 0.00 3.93
4586 5300 1.271652 TGGACAGAAAATGCGGCCTAA 60.272 47.619 0.00 0.00 0.00 2.69
4587 5301 1.132453 GGACAGAAAATGCGGCCTAAC 59.868 52.381 0.00 0.00 0.00 2.34
4588 5302 0.802494 ACAGAAAATGCGGCCTAACG 59.198 50.000 0.00 0.00 0.00 3.18
4596 5310 3.484547 CGGCCTAACGCGTTGACC 61.485 66.667 33.40 27.04 38.94 4.02
4597 5311 3.122971 GGCCTAACGCGTTGACCC 61.123 66.667 33.40 24.00 38.94 4.46
4598 5312 2.357760 GCCTAACGCGTTGACCCA 60.358 61.111 33.40 13.02 0.00 4.51
4599 5313 1.962306 GCCTAACGCGTTGACCCAA 60.962 57.895 33.40 12.24 0.00 4.12
4600 5314 1.508808 GCCTAACGCGTTGACCCAAA 61.509 55.000 33.40 11.47 0.00 3.28
4601 5315 0.236449 CCTAACGCGTTGACCCAAAC 59.764 55.000 33.40 0.00 0.00 2.93
4607 5321 4.563404 GTTGACCCAAACGACCCA 57.437 55.556 0.00 0.00 0.00 4.51
4608 5322 2.796500 GTTGACCCAAACGACCCAA 58.204 52.632 0.00 0.00 0.00 4.12
4609 5323 1.104630 GTTGACCCAAACGACCCAAA 58.895 50.000 0.00 0.00 0.00 3.28
4610 5324 1.104630 TTGACCCAAACGACCCAAAC 58.895 50.000 0.00 0.00 0.00 2.93
4611 5325 1.096386 TGACCCAAACGACCCAAACG 61.096 55.000 0.00 0.00 0.00 3.60
4612 5326 1.788067 GACCCAAACGACCCAAACGG 61.788 60.000 0.00 0.00 37.81 4.44
4613 5327 1.526455 CCCAAACGACCCAAACGGA 60.526 57.895 0.00 0.00 34.64 4.69
4614 5328 1.650363 CCAAACGACCCAAACGGAC 59.350 57.895 0.00 0.00 34.64 4.79
4629 5343 2.496171 GACGCGCGTCCGTTTTTC 60.496 61.111 44.30 23.38 42.24 2.29
4630 5344 4.344109 ACGCGCGTCCGTTTTTCG 62.344 61.111 32.73 0.00 38.47 3.46
4631 5345 4.344109 CGCGCGTCCGTTTTTCGT 62.344 61.111 24.19 0.00 37.94 3.85
4632 5346 2.496171 GCGCGTCCGTTTTTCGTC 60.496 61.111 8.43 0.00 37.94 4.20
4633 5347 2.169327 CGCGTCCGTTTTTCGTCC 59.831 61.111 0.00 0.00 37.94 4.79
4634 5348 2.169327 GCGTCCGTTTTTCGTCCG 59.831 61.111 0.00 0.00 37.94 4.79
4635 5349 2.169327 CGTCCGTTTTTCGTCCGC 59.831 61.111 0.00 0.00 37.94 5.54
4636 5350 2.169327 GTCCGTTTTTCGTCCGCG 59.831 61.111 0.00 0.00 37.94 6.46
4637 5351 3.037249 TCCGTTTTTCGTCCGCGG 61.037 61.111 22.12 22.12 43.32 6.46
4638 5352 4.079748 CCGTTTTTCGTCCGCGGG 62.080 66.667 27.83 10.69 38.86 6.13
4639 5353 4.729798 CGTTTTTCGTCCGCGGGC 62.730 66.667 27.83 25.32 38.89 6.13
4640 5354 4.729798 GTTTTTCGTCCGCGGGCG 62.730 66.667 44.15 44.15 38.89 6.13
4654 5368 2.267961 GGCGACCCATTCTCGGTT 59.732 61.111 0.00 0.00 32.27 4.44
4655 5369 1.814169 GGCGACCCATTCTCGGTTC 60.814 63.158 0.00 0.00 32.27 3.62
4656 5370 1.079405 GCGACCCATTCTCGGTTCA 60.079 57.895 0.00 0.00 32.27 3.18
4657 5371 0.462047 GCGACCCATTCTCGGTTCAT 60.462 55.000 0.00 0.00 32.27 2.57
4658 5372 2.012051 GCGACCCATTCTCGGTTCATT 61.012 52.381 0.00 0.00 32.27 2.57
4659 5373 2.356135 CGACCCATTCTCGGTTCATTT 58.644 47.619 0.00 0.00 32.27 2.32
4660 5374 2.747446 CGACCCATTCTCGGTTCATTTT 59.253 45.455 0.00 0.00 32.27 1.82
4661 5375 3.190535 CGACCCATTCTCGGTTCATTTTT 59.809 43.478 0.00 0.00 32.27 1.94
4662 5376 4.393680 CGACCCATTCTCGGTTCATTTTTA 59.606 41.667 0.00 0.00 32.27 1.52
4663 5377 5.447279 CGACCCATTCTCGGTTCATTTTTAG 60.447 44.000 0.00 0.00 32.27 1.85
4664 5378 4.157840 ACCCATTCTCGGTTCATTTTTAGC 59.842 41.667 0.00 0.00 0.00 3.09
4665 5379 4.440112 CCCATTCTCGGTTCATTTTTAGCC 60.440 45.833 0.00 0.00 0.00 3.93
4666 5380 4.399303 CCATTCTCGGTTCATTTTTAGCCT 59.601 41.667 0.00 0.00 0.00 4.58
4667 5381 5.335127 CATTCTCGGTTCATTTTTAGCCTG 58.665 41.667 0.00 0.00 0.00 4.85
4668 5382 4.280436 TCTCGGTTCATTTTTAGCCTGA 57.720 40.909 0.00 0.00 0.00 3.86
4669 5383 4.843728 TCTCGGTTCATTTTTAGCCTGAT 58.156 39.130 0.00 0.00 0.00 2.90
4670 5384 5.253330 TCTCGGTTCATTTTTAGCCTGATT 58.747 37.500 0.00 0.00 0.00 2.57
4671 5385 5.710099 TCTCGGTTCATTTTTAGCCTGATTT 59.290 36.000 0.00 0.00 0.00 2.17
4672 5386 5.708948 TCGGTTCATTTTTAGCCTGATTTG 58.291 37.500 0.00 0.00 0.00 2.32
4673 5387 4.327087 CGGTTCATTTTTAGCCTGATTTGC 59.673 41.667 0.00 0.00 0.00 3.68
4674 5388 4.327087 GGTTCATTTTTAGCCTGATTTGCG 59.673 41.667 0.00 0.00 0.00 4.85
4675 5389 4.782019 TCATTTTTAGCCTGATTTGCGT 57.218 36.364 0.00 0.00 0.00 5.24
4676 5390 4.732784 TCATTTTTAGCCTGATTTGCGTC 58.267 39.130 0.00 0.00 0.00 5.19
4677 5391 2.892373 TTTTAGCCTGATTTGCGTCG 57.108 45.000 0.00 0.00 0.00 5.12
4678 5392 1.083489 TTTAGCCTGATTTGCGTCGG 58.917 50.000 0.00 0.00 0.00 4.79
4679 5393 1.366111 TTAGCCTGATTTGCGTCGGC 61.366 55.000 0.00 0.00 37.76 5.54
4680 5394 4.520846 GCCTGATTTGCGTCGGCG 62.521 66.667 4.29 4.29 44.10 6.46
4719 5433 4.914420 CGCGCTCGCCTACTCCTG 62.914 72.222 5.56 0.00 37.98 3.86
4720 5434 3.827898 GCGCTCGCCTACTCCTGT 61.828 66.667 0.00 0.00 34.56 4.00
4721 5435 2.409651 CGCTCGCCTACTCCTGTC 59.590 66.667 0.00 0.00 0.00 3.51
4722 5436 2.809010 GCTCGCCTACTCCTGTCC 59.191 66.667 0.00 0.00 0.00 4.02
4723 5437 2.787567 GCTCGCCTACTCCTGTCCC 61.788 68.421 0.00 0.00 0.00 4.46
4724 5438 2.043248 TCGCCTACTCCTGTCCCC 60.043 66.667 0.00 0.00 0.00 4.81
4725 5439 3.528370 CGCCTACTCCTGTCCCCG 61.528 72.222 0.00 0.00 0.00 5.73
4726 5440 3.155167 GCCTACTCCTGTCCCCGG 61.155 72.222 0.00 0.00 0.00 5.73
4727 5441 2.444140 CCTACTCCTGTCCCCGGG 60.444 72.222 15.80 15.80 38.61 5.73
4728 5442 3.155167 CTACTCCTGTCCCCGGGC 61.155 72.222 17.73 2.17 37.01 6.13
4729 5443 4.791069 TACTCCTGTCCCCGGGCC 62.791 72.222 17.73 8.41 37.01 5.80
4734 5448 4.722700 CTGTCCCCGGGCCTGTTG 62.723 72.222 17.73 0.00 0.00 3.33
4739 5453 4.722700 CCCGGGCCTGTTGGTCTG 62.723 72.222 8.08 0.00 43.79 3.51
4740 5454 3.953775 CCGGGCCTGTTGGTCTGT 61.954 66.667 11.58 0.00 42.66 3.41
4741 5455 2.669569 CGGGCCTGTTGGTCTGTG 60.670 66.667 2.29 0.00 39.43 3.66
4742 5456 2.282462 GGGCCTGTTGGTCTGTGG 60.282 66.667 0.84 0.00 38.23 4.17
4743 5457 2.985847 GGCCTGTTGGTCTGTGGC 60.986 66.667 0.00 0.00 42.56 5.01
4744 5458 2.203337 GCCTGTTGGTCTGTGGCA 60.203 61.111 0.00 0.00 42.79 4.92
4745 5459 2.555547 GCCTGTTGGTCTGTGGCAC 61.556 63.158 11.55 11.55 42.79 5.01
4746 5460 1.152984 CCTGTTGGTCTGTGGCACA 60.153 57.895 20.76 20.76 0.00 4.57
4747 5461 0.538057 CCTGTTGGTCTGTGGCACAT 60.538 55.000 22.35 0.00 44.52 3.21
4748 5462 1.321474 CTGTTGGTCTGTGGCACATT 58.679 50.000 22.35 0.00 44.52 2.71
4749 5463 1.001048 CTGTTGGTCTGTGGCACATTG 60.001 52.381 22.35 10.82 44.52 2.82
4750 5464 0.314935 GTTGGTCTGTGGCACATTGG 59.685 55.000 22.35 10.02 44.52 3.16
4751 5465 1.462731 TTGGTCTGTGGCACATTGGC 61.463 55.000 22.35 12.00 44.52 4.52
4759 5473 3.608432 GCACATTGGCCTCCCTTC 58.392 61.111 3.32 0.00 0.00 3.46
4760 5474 2.054453 GCACATTGGCCTCCCTTCC 61.054 63.158 3.32 0.00 0.00 3.46
4761 5475 1.693640 CACATTGGCCTCCCTTCCT 59.306 57.895 3.32 0.00 0.00 3.36
4762 5476 0.394899 CACATTGGCCTCCCTTCCTC 60.395 60.000 3.32 0.00 0.00 3.71
4763 5477 0.551131 ACATTGGCCTCCCTTCCTCT 60.551 55.000 3.32 0.00 0.00 3.69
4764 5478 0.182299 CATTGGCCTCCCTTCCTCTC 59.818 60.000 3.32 0.00 0.00 3.20
4765 5479 1.341156 ATTGGCCTCCCTTCCTCTCG 61.341 60.000 3.32 0.00 0.00 4.04
4766 5480 3.157949 GGCCTCCCTTCCTCTCGG 61.158 72.222 0.00 0.00 0.00 4.63
4767 5481 3.855853 GCCTCCCTTCCTCTCGGC 61.856 72.222 0.00 0.00 0.00 5.54
4768 5482 3.157949 CCTCCCTTCCTCTCGGCC 61.158 72.222 0.00 0.00 0.00 6.13
4769 5483 2.364317 CTCCCTTCCTCTCGGCCA 60.364 66.667 2.24 0.00 0.00 5.36
4770 5484 1.990060 CTCCCTTCCTCTCGGCCAA 60.990 63.158 2.24 0.00 0.00 4.52
4771 5485 2.245438 CTCCCTTCCTCTCGGCCAAC 62.245 65.000 2.24 0.00 0.00 3.77
4772 5486 2.592993 CCCTTCCTCTCGGCCAACA 61.593 63.158 2.24 0.00 0.00 3.33
4773 5487 1.374947 CCTTCCTCTCGGCCAACAA 59.625 57.895 2.24 0.00 0.00 2.83
4774 5488 0.674895 CCTTCCTCTCGGCCAACAAG 60.675 60.000 2.24 0.00 0.00 3.16
4775 5489 0.035458 CTTCCTCTCGGCCAACAAGT 59.965 55.000 2.24 0.00 0.00 3.16
4776 5490 1.275291 CTTCCTCTCGGCCAACAAGTA 59.725 52.381 2.24 0.00 0.00 2.24
4777 5491 1.344065 TCCTCTCGGCCAACAAGTAA 58.656 50.000 2.24 0.00 0.00 2.24
4778 5492 1.001633 TCCTCTCGGCCAACAAGTAAC 59.998 52.381 2.24 0.00 0.00 2.50
4779 5493 1.439679 CTCTCGGCCAACAAGTAACC 58.560 55.000 2.24 0.00 0.00 2.85
4780 5494 0.035739 TCTCGGCCAACAAGTAACCC 59.964 55.000 2.24 0.00 0.00 4.11
4781 5495 0.036306 CTCGGCCAACAAGTAACCCT 59.964 55.000 2.24 0.00 0.00 4.34
4782 5496 0.035739 TCGGCCAACAAGTAACCCTC 59.964 55.000 2.24 0.00 0.00 4.30
4783 5497 1.296056 CGGCCAACAAGTAACCCTCG 61.296 60.000 2.24 0.00 0.00 4.63
4784 5498 1.583495 GGCCAACAAGTAACCCTCGC 61.583 60.000 0.00 0.00 0.00 5.03
4785 5499 1.583495 GCCAACAAGTAACCCTCGCC 61.583 60.000 0.00 0.00 0.00 5.54
4786 5500 0.958876 CCAACAAGTAACCCTCGCCC 60.959 60.000 0.00 0.00 0.00 6.13
4787 5501 0.958876 CAACAAGTAACCCTCGCCCC 60.959 60.000 0.00 0.00 0.00 5.80
4788 5502 2.133359 AACAAGTAACCCTCGCCCCC 62.133 60.000 0.00 0.00 0.00 5.40
4789 5503 3.396570 AAGTAACCCTCGCCCCCG 61.397 66.667 0.00 0.00 0.00 5.73
4806 5520 4.131088 GCCTCCTCCGTCACCGAC 62.131 72.222 0.00 0.00 35.63 4.79
4823 5537 2.202298 CGCCGTCGTCCATTTTGC 60.202 61.111 0.00 0.00 0.00 3.68
4824 5538 2.178273 GCCGTCGTCCATTTTGCC 59.822 61.111 0.00 0.00 0.00 4.52
4825 5539 2.478746 CCGTCGTCCATTTTGCCG 59.521 61.111 0.00 0.00 0.00 5.69
4826 5540 2.478746 CGTCGTCCATTTTGCCGG 59.521 61.111 0.00 0.00 0.00 6.13
4827 5541 2.178273 GTCGTCCATTTTGCCGGC 59.822 61.111 22.73 22.73 0.00 6.13
4828 5542 2.033448 TCGTCCATTTTGCCGGCT 59.967 55.556 29.70 3.37 0.00 5.52
4829 5543 1.022451 GTCGTCCATTTTGCCGGCTA 61.022 55.000 29.70 19.10 0.00 3.93
4830 5544 1.022451 TCGTCCATTTTGCCGGCTAC 61.022 55.000 29.70 12.52 0.00 3.58
4831 5545 1.024579 CGTCCATTTTGCCGGCTACT 61.025 55.000 29.70 7.20 0.00 2.57
4832 5546 0.733150 GTCCATTTTGCCGGCTACTC 59.267 55.000 29.70 6.16 0.00 2.59
4833 5547 0.618458 TCCATTTTGCCGGCTACTCT 59.382 50.000 29.70 5.58 0.00 3.24
4834 5548 1.004277 TCCATTTTGCCGGCTACTCTT 59.996 47.619 29.70 4.58 0.00 2.85
4835 5549 1.401905 CCATTTTGCCGGCTACTCTTC 59.598 52.381 29.70 0.00 0.00 2.87
4836 5550 1.401905 CATTTTGCCGGCTACTCTTCC 59.598 52.381 29.70 0.00 0.00 3.46
4837 5551 0.398696 TTTTGCCGGCTACTCTTCCA 59.601 50.000 29.70 0.00 0.00 3.53
4838 5552 0.036388 TTTGCCGGCTACTCTTCCAG 60.036 55.000 29.70 0.00 0.00 3.86
4839 5553 2.202946 GCCGGCTACTCTTCCAGC 60.203 66.667 22.15 0.00 37.05 4.85
4840 5554 2.726351 GCCGGCTACTCTTCCAGCT 61.726 63.158 22.15 0.00 37.91 4.24
4841 5555 1.142748 CCGGCTACTCTTCCAGCTG 59.857 63.158 6.78 6.78 42.67 4.24
4842 5556 1.520342 CGGCTACTCTTCCAGCTGC 60.520 63.158 8.66 0.00 37.35 5.25
4843 5557 1.153269 GGCTACTCTTCCAGCTGCC 60.153 63.158 8.66 0.00 37.91 4.85
4844 5558 1.520342 GCTACTCTTCCAGCTGCCG 60.520 63.158 8.66 0.00 34.86 5.69
4845 5559 1.520342 CTACTCTTCCAGCTGCCGC 60.520 63.158 8.66 0.00 0.00 6.53
4846 5560 2.914777 CTACTCTTCCAGCTGCCGCC 62.915 65.000 8.66 0.00 36.60 6.13
4856 5570 2.512286 CTGCCGCCGTCATCACAT 60.512 61.111 0.00 0.00 0.00 3.21
4857 5571 2.511373 TGCCGCCGTCATCACATC 60.511 61.111 0.00 0.00 0.00 3.06
4858 5572 3.272334 GCCGCCGTCATCACATCC 61.272 66.667 0.00 0.00 0.00 3.51
4859 5573 2.961721 CCGCCGTCATCACATCCG 60.962 66.667 0.00 0.00 0.00 4.18
4860 5574 3.630148 CGCCGTCATCACATCCGC 61.630 66.667 0.00 0.00 0.00 5.54
4861 5575 3.272334 GCCGTCATCACATCCGCC 61.272 66.667 0.00 0.00 0.00 6.13
4862 5576 2.588877 CCGTCATCACATCCGCCC 60.589 66.667 0.00 0.00 0.00 6.13
4863 5577 2.186644 CGTCATCACATCCGCCCA 59.813 61.111 0.00 0.00 0.00 5.36
4864 5578 1.884464 CGTCATCACATCCGCCCAG 60.884 63.158 0.00 0.00 0.00 4.45
4865 5579 2.182842 GTCATCACATCCGCCCAGC 61.183 63.158 0.00 0.00 0.00 4.85
4866 5580 2.124612 CATCACATCCGCCCAGCA 60.125 61.111 0.00 0.00 0.00 4.41
4867 5581 1.750018 CATCACATCCGCCCAGCAA 60.750 57.895 0.00 0.00 0.00 3.91
4868 5582 1.750399 ATCACATCCGCCCAGCAAC 60.750 57.895 0.00 0.00 0.00 4.17
4869 5583 2.482796 ATCACATCCGCCCAGCAACA 62.483 55.000 0.00 0.00 0.00 3.33
4870 5584 2.672996 ACATCCGCCCAGCAACAC 60.673 61.111 0.00 0.00 0.00 3.32
4871 5585 3.443045 CATCCGCCCAGCAACACC 61.443 66.667 0.00 0.00 0.00 4.16
4878 5592 3.751246 CCAGCAACACCGCCCATG 61.751 66.667 0.00 0.00 0.00 3.66
4879 5593 2.672651 CAGCAACACCGCCCATGA 60.673 61.111 0.00 0.00 0.00 3.07
4880 5594 2.672996 AGCAACACCGCCCATGAC 60.673 61.111 0.00 0.00 0.00 3.06
4881 5595 3.747976 GCAACACCGCCCATGACC 61.748 66.667 0.00 0.00 0.00 4.02
4882 5596 3.061848 CAACACCGCCCATGACCC 61.062 66.667 0.00 0.00 0.00 4.46
4883 5597 3.575247 AACACCGCCCATGACCCA 61.575 61.111 0.00 0.00 0.00 4.51
4884 5598 3.567579 AACACCGCCCATGACCCAG 62.568 63.158 0.00 0.00 0.00 4.45
4885 5599 4.033776 CACCGCCCATGACCCAGT 62.034 66.667 0.00 0.00 0.00 4.00
4886 5600 3.717294 ACCGCCCATGACCCAGTC 61.717 66.667 0.00 0.00 0.00 3.51
4887 5601 4.838152 CCGCCCATGACCCAGTCG 62.838 72.222 0.00 0.00 34.95 4.18
4888 5602 4.082523 CGCCCATGACCCAGTCGT 62.083 66.667 0.00 0.00 34.95 4.34
4889 5603 2.125106 GCCCATGACCCAGTCGTC 60.125 66.667 0.00 0.00 34.95 4.20
4890 5604 2.584608 CCCATGACCCAGTCGTCC 59.415 66.667 0.00 0.00 34.95 4.79
4891 5605 2.184322 CCATGACCCAGTCGTCCG 59.816 66.667 0.00 0.00 34.95 4.79
4892 5606 2.509336 CATGACCCAGTCGTCCGC 60.509 66.667 0.00 0.00 34.95 5.54
4893 5607 3.771160 ATGACCCAGTCGTCCGCC 61.771 66.667 0.00 0.00 34.95 6.13
4914 5628 4.660938 GCCGGGGAGCAAACTGGT 62.661 66.667 2.18 0.00 35.51 4.00
4915 5629 2.115266 CCGGGGAGCAAACTGGTT 59.885 61.111 0.00 0.00 0.00 3.67
4916 5630 1.971695 CCGGGGAGCAAACTGGTTC 60.972 63.158 0.00 0.00 0.00 3.62
4917 5631 1.971695 CGGGGAGCAAACTGGTTCC 60.972 63.158 0.00 0.00 42.80 3.62
4919 5633 1.971695 GGGAGCAAACTGGTTCCCG 60.972 63.158 0.00 0.00 46.48 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.269453 TGTTTGATGAAATGTTAAAATCATGCA 57.731 25.926 0.00 0.00 32.90 3.96
1 2 9.749490 CTGTTTGATGAAATGTTAAAATCATGC 57.251 29.630 0.00 0.00 32.90 4.06
114 115 1.406539 CATCCCACTAGCATTTGTGCC 59.593 52.381 0.00 0.00 34.90 5.01
173 174 5.746990 AGAATTATCGTATAGCCTTGCCT 57.253 39.130 0.00 0.00 0.00 4.75
224 229 2.481854 TGTGTTTCACATGCCAATTGC 58.518 42.857 0.00 0.00 39.62 3.56
225 230 4.571580 ACTTTGTGTTTCACATGCCAATTG 59.428 37.500 0.00 0.00 44.16 2.32
229 234 4.582240 TGATACTTTGTGTTTCACATGCCA 59.418 37.500 3.43 0.00 44.16 4.92
232 237 8.238631 TGATCATGATACTTTGTGTTTCACATG 58.761 33.333 8.54 0.00 44.16 3.21
245 250 9.669353 GTTCGCAAATTAATGATCATGATACTT 57.331 29.630 9.46 7.73 0.00 2.24
393 403 2.158579 ACGCACTCCTTTTTCCCCTTTA 60.159 45.455 0.00 0.00 0.00 1.85
410 420 0.318441 CCAGAGAGAGGTTTCACGCA 59.682 55.000 0.00 0.00 0.00 5.24
490 509 1.673665 CAAGAGGCAGGTGCTGGTC 60.674 63.158 1.26 0.00 41.70 4.02
758 778 4.778143 CAAAGCCCTCGTCCCCCG 62.778 72.222 0.00 0.00 38.13 5.73
845 877 5.006746 GGGTATCGTTCACAATAAGCTTCAG 59.993 44.000 0.00 0.00 0.00 3.02
860 892 1.405272 CGGGGCTAAGGGGTATCGTT 61.405 60.000 0.00 0.00 0.00 3.85
863 895 1.702022 TTGCGGGGCTAAGGGGTATC 61.702 60.000 0.00 0.00 0.00 2.24
878 910 2.203126 GATCCCTGAGGCCTTGCG 60.203 66.667 6.77 0.00 0.00 4.85
880 912 2.612760 TCAGATCCCTGAGGCCTTG 58.387 57.895 6.77 2.72 44.01 3.61
889 921 1.573108 TTTCTTCGGCTCAGATCCCT 58.427 50.000 0.00 0.00 0.00 4.20
898 930 2.486592 CCAACCGTAATTTTCTTCGGCT 59.513 45.455 0.00 0.00 45.76 5.52
910 942 1.560866 ATAACCCCCGCCAACCGTAA 61.561 55.000 0.00 0.00 34.38 3.18
935 967 3.412237 AGCGGAAAGTAGTGGCTTTTA 57.588 42.857 0.00 0.00 38.64 1.52
938 970 2.152016 GAAAGCGGAAAGTAGTGGCTT 58.848 47.619 0.00 0.00 45.11 4.35
940 972 0.442699 CGAAAGCGGAAAGTAGTGGC 59.557 55.000 0.00 0.00 0.00 5.01
967 999 2.571757 CAAGAGCCAGTACGCCGA 59.428 61.111 0.00 0.00 0.00 5.54
1221 1254 8.603304 AGATAAACAAGTAGTACAAGGGTGAAT 58.397 33.333 2.52 0.00 0.00 2.57
1231 1264 8.702819 AGGGGTCAATAGATAAACAAGTAGTAC 58.297 37.037 0.00 0.00 0.00 2.73
1233 1266 7.750947 AGGGGTCAATAGATAAACAAGTAGT 57.249 36.000 0.00 0.00 0.00 2.73
1247 1280 5.508489 CGCGTCTAGAAATTAGGGGTCAATA 60.508 44.000 0.00 0.00 0.00 1.90
1266 1299 4.101790 CCACACAATGCCCGCGTC 62.102 66.667 4.92 0.00 0.00 5.19
1305 1338 1.786579 GGCAACACAAACGATTCAAGC 59.213 47.619 0.00 0.00 0.00 4.01
1406 1604 4.825546 AGCAGAACTCACAATTCAGTTG 57.174 40.909 0.00 0.00 43.64 3.16
1473 1671 2.483188 CCGACTCCCTAATGTAACAGGC 60.483 54.545 0.00 0.00 0.00 4.85
1488 1686 5.122396 AGCACAAGATCAAAAATACCGACTC 59.878 40.000 0.00 0.00 0.00 3.36
1503 1701 6.205076 GCATCATTCTTCAGATAGCACAAGAT 59.795 38.462 0.00 0.00 0.00 2.40
1508 1706 5.943706 ATGCATCATTCTTCAGATAGCAC 57.056 39.130 0.00 0.00 34.02 4.40
1510 1708 7.387122 TCAACTATGCATCATTCTTCAGATAGC 59.613 37.037 0.19 0.00 0.00 2.97
1551 1752 9.793252 AGCACATAAATTCATCTTTGTACAATC 57.207 29.630 9.56 0.00 0.00 2.67
1561 1762 7.308229 GGCGAATAGAAGCACATAAATTCATCT 60.308 37.037 0.00 0.00 34.54 2.90
1562 1763 6.798959 GGCGAATAGAAGCACATAAATTCATC 59.201 38.462 0.00 0.00 34.54 2.92
1563 1764 6.566564 CGGCGAATAGAAGCACATAAATTCAT 60.567 38.462 0.00 0.00 34.54 2.57
1571 1772 1.571919 GACGGCGAATAGAAGCACAT 58.428 50.000 16.62 0.00 34.54 3.21
1582 1783 1.265635 CAAAAGACAATGGACGGCGAA 59.734 47.619 16.62 0.00 0.00 4.70
1586 1787 2.791383 TTGCAAAAGACAATGGACGG 57.209 45.000 0.00 0.00 0.00 4.79
1588 1789 4.211794 CCACAATTGCAAAAGACAATGGAC 59.788 41.667 1.71 0.00 37.78 4.02
1660 1862 5.054477 GGACACGGCAATATAAGCTAAAGA 58.946 41.667 0.00 0.00 0.00 2.52
1682 1884 8.450964 TCGCTTACATGATAGAAAAGAAAAAGG 58.549 33.333 0.00 0.00 0.00 3.11
1694 1896 4.266265 CGCATGGTATCGCTTACATGATAG 59.734 45.833 0.00 0.00 31.99 2.08
1761 1963 9.699410 TGTCTGACCTTAAAATTAATGATGGAT 57.301 29.630 5.17 0.00 0.00 3.41
1812 2014 9.347934 GAAGATAATCTGTCGGTAGAATACATG 57.652 37.037 0.00 0.00 45.43 3.21
1824 2026 8.050778 AGCTAAGATAGGAAGATAATCTGTCG 57.949 38.462 0.00 0.00 30.50 4.35
1838 2040 7.368198 AGAAAGGAAGGTAAGCTAAGATAGG 57.632 40.000 0.00 0.00 0.00 2.57
1955 2165 4.557205 GTTAACCTCTACCACACAGACTG 58.443 47.826 0.00 0.00 0.00 3.51
2147 2357 0.392706 TCAACAGATCACGCCACACT 59.607 50.000 0.00 0.00 0.00 3.55
2183 2393 3.550820 TCAACAGCACTTCCAGCTAAAA 58.449 40.909 0.00 0.00 41.14 1.52
2187 2397 3.641434 ATATCAACAGCACTTCCAGCT 57.359 42.857 0.00 0.00 44.62 4.24
2188 2398 6.875726 TCATATATATCAACAGCACTTCCAGC 59.124 38.462 0.00 0.00 0.00 4.85
2210 2420 8.645814 ACATGCCATCTATATTCACATTTCAT 57.354 30.769 0.00 0.00 0.00 2.57
2217 2427 6.156519 TGACGTACATGCCATCTATATTCAC 58.843 40.000 0.00 0.00 0.00 3.18
2229 2439 4.632153 AGAAAGGATATGACGTACATGCC 58.368 43.478 9.77 10.29 39.77 4.40
2299 2509 8.997621 TCCATTACAACAACTTCAGATAGTAC 57.002 34.615 0.00 0.00 0.00 2.73
2428 2644 5.991933 TTGGCCTTAATTAATCACTTGCA 57.008 34.783 3.32 0.00 0.00 4.08
2521 2737 3.504134 AGATACTACAGAGGTATGCGCAG 59.496 47.826 18.32 1.98 31.03 5.18
2523 2739 3.754323 AGAGATACTACAGAGGTATGCGC 59.246 47.826 0.00 0.00 31.03 6.09
2524 2740 5.950758 AAGAGATACTACAGAGGTATGCG 57.049 43.478 0.00 0.00 31.03 4.73
2586 2802 1.144913 AGCAAACCTAGGCTCAAACCA 59.855 47.619 9.30 0.00 34.76 3.67
2594 2810 0.321298 TTGGTCGAGCAAACCTAGGC 60.321 55.000 26.54 0.00 37.69 3.93
2644 2863 9.967451 TTTGACAATACCAAACCATCTAGATTA 57.033 29.630 1.33 0.00 0.00 1.75
2709 2928 3.273434 TGCTTAGTGGCATGATGAAGAC 58.727 45.455 0.00 0.00 37.29 3.01
3014 3298 4.032558 CGGACGTAAGCAAGAAAATAGACC 59.967 45.833 0.00 0.00 45.62 3.85
3256 3541 7.554211 TCCAACCATATGTGTTATGTTACGTA 58.446 34.615 1.24 0.00 36.69 3.57
3257 3542 6.408035 TCCAACCATATGTGTTATGTTACGT 58.592 36.000 1.24 0.00 36.69 3.57
3261 3546 8.811017 TCAAATTCCAACCATATGTGTTATGTT 58.189 29.630 1.24 0.00 36.69 2.71
3262 3547 8.359875 TCAAATTCCAACCATATGTGTTATGT 57.640 30.769 1.24 0.00 36.69 2.29
3263 3548 9.820725 AATCAAATTCCAACCATATGTGTTATG 57.179 29.630 1.24 1.87 37.94 1.90
3308 3877 8.693542 AATAATCTTTTATCAAGCAACACAGC 57.306 30.769 0.00 0.00 0.00 4.40
3335 3904 4.023980 CACTATCCTTCACCCACTAGTGA 58.976 47.826 24.68 0.93 44.89 3.41
3434 4067 2.295885 GTCATCTTCCCATCTGCAAGG 58.704 52.381 0.00 0.00 0.00 3.61
3464 4097 4.935352 TCCCATGTTTCTTTTGAACCAG 57.065 40.909 0.00 0.00 34.38 4.00
3529 4162 3.052455 TGTTCTTCAGCGGCTTTATCA 57.948 42.857 0.00 0.00 0.00 2.15
3686 4320 5.934625 AGCCTATTGTTGTTCAGTAACTCAG 59.065 40.000 0.00 0.00 36.51 3.35
3697 4331 0.114168 TGGGCCAGCCTATTGTTGTT 59.886 50.000 0.00 0.00 36.10 2.83
3701 4340 1.488390 CAAATGGGCCAGCCTATTGT 58.512 50.000 19.51 8.39 44.80 2.71
3718 4366 6.708502 TGTTTATAGTGCAGACTTGTTAGCAA 59.291 34.615 0.00 0.00 38.91 3.91
3724 4372 6.017934 CACAGTTGTTTATAGTGCAGACTTGT 60.018 38.462 0.00 0.00 33.21 3.16
3726 4374 6.017934 CACACAGTTGTTTATAGTGCAGACTT 60.018 38.462 0.00 0.00 31.66 3.01
3746 4394 2.106338 ACATCAGGAATCCACACACACA 59.894 45.455 0.61 0.00 0.00 3.72
3778 4426 9.629878 ATCTCTCAAAAGATAAATGAATGAGCT 57.370 29.630 0.00 0.00 34.21 4.09
3779 4427 9.666626 CATCTCTCAAAAGATAAATGAATGAGC 57.333 33.333 0.00 0.00 34.21 4.26
3789 4437 8.196771 GCTTCTCTCTCATCTCTCAAAAGATAA 58.803 37.037 0.00 0.00 34.21 1.75
3790 4438 7.560991 AGCTTCTCTCTCATCTCTCAAAAGATA 59.439 37.037 0.00 0.00 34.21 1.98
3791 4439 6.381994 AGCTTCTCTCTCATCTCTCAAAAGAT 59.618 38.462 0.00 0.00 36.41 2.40
3792 4440 5.716228 AGCTTCTCTCTCATCTCTCAAAAGA 59.284 40.000 0.00 0.00 0.00 2.52
3793 4441 5.969423 AGCTTCTCTCTCATCTCTCAAAAG 58.031 41.667 0.00 0.00 0.00 2.27
3794 4442 5.999205 AGCTTCTCTCTCATCTCTCAAAA 57.001 39.130 0.00 0.00 0.00 2.44
3795 4443 7.658525 AATAGCTTCTCTCTCATCTCTCAAA 57.341 36.000 0.00 0.00 0.00 2.69
3796 4444 7.040478 GCTAATAGCTTCTCTCTCATCTCTCAA 60.040 40.741 4.79 0.00 38.45 3.02
3797 4445 6.430925 GCTAATAGCTTCTCTCTCATCTCTCA 59.569 42.308 4.79 0.00 38.45 3.27
3798 4446 6.846350 GCTAATAGCTTCTCTCTCATCTCTC 58.154 44.000 4.79 0.00 38.45 3.20
3799 4447 6.824305 GCTAATAGCTTCTCTCTCATCTCT 57.176 41.667 4.79 0.00 38.45 3.10
3814 4462 3.251972 GCCAGAACCAATGAGCTAATAGC 59.748 47.826 3.66 3.66 42.84 2.97
3815 4463 4.712476 AGCCAGAACCAATGAGCTAATAG 58.288 43.478 0.00 0.00 0.00 1.73
3816 4464 4.778213 AGCCAGAACCAATGAGCTAATA 57.222 40.909 0.00 0.00 0.00 0.98
3817 4465 3.659183 AGCCAGAACCAATGAGCTAAT 57.341 42.857 0.00 0.00 0.00 1.73
3868 4516 2.891580 GTCTAGGTTGATGCCGGAGATA 59.108 50.000 5.05 0.00 31.36 1.98
3874 4522 0.249073 CCTCGTCTAGGTTGATGCCG 60.249 60.000 0.00 0.00 40.94 5.69
3886 4534 1.202582 CTTGGTTCATCGTCCTCGTCT 59.797 52.381 0.00 0.00 38.33 4.18
3910 4558 1.066914 GTTTCTGCTCTCAGCTGTCG 58.933 55.000 14.67 6.52 42.97 4.35
3932 4580 2.223144 TCGCAGCTAACACATTGACAAC 59.777 45.455 0.00 0.00 0.00 3.32
3939 4587 0.320421 AACCGTCGCAGCTAACACAT 60.320 50.000 0.00 0.00 0.00 3.21
3959 4609 2.775856 GGCATCGACGAGGCAGAGA 61.776 63.158 32.17 0.00 41.39 3.10
3962 4612 4.498520 ACGGCATCGACGAGGCAG 62.499 66.667 32.17 30.09 41.39 4.85
3972 4622 1.421485 CTGCTTTGTCGACGGCATC 59.579 57.895 23.58 8.78 34.12 3.91
4041 4695 1.670811 CTCCGTTTCAAGTGCACAAGT 59.329 47.619 21.04 0.00 0.00 3.16
4066 4764 5.517770 CCGTTTAGGTATACACTTGCTACAC 59.482 44.000 5.01 0.00 34.51 2.90
4077 4775 6.673796 GCAACACACATTCCGTTTAGGTATAC 60.674 42.308 0.00 0.00 41.99 1.47
4079 4777 4.155280 GCAACACACATTCCGTTTAGGTAT 59.845 41.667 0.00 0.00 41.99 2.73
4080 4778 3.499157 GCAACACACATTCCGTTTAGGTA 59.501 43.478 0.00 0.00 41.99 3.08
4081 4779 2.292292 GCAACACACATTCCGTTTAGGT 59.708 45.455 0.00 0.00 41.99 3.08
4082 4780 2.552315 AGCAACACACATTCCGTTTAGG 59.448 45.455 0.00 0.00 42.97 2.69
4085 4783 1.748493 ACAGCAACACACATTCCGTTT 59.252 42.857 0.00 0.00 0.00 3.60
4128 4827 0.537188 AGGGTGTACAATCGCCTCAG 59.463 55.000 0.00 0.00 38.01 3.35
4134 4833 1.278127 AGGTCCAAGGGTGTACAATCG 59.722 52.381 0.00 0.00 0.00 3.34
4139 4838 1.948391 ACCTAGGTCCAAGGGTGTAC 58.052 55.000 9.21 0.00 38.54 2.90
4153 4852 1.616159 CCACCCAACACCAAACCTAG 58.384 55.000 0.00 0.00 0.00 3.02
4155 4854 1.075600 CCCACCCAACACCAAACCT 60.076 57.895 0.00 0.00 0.00 3.50
4205 4906 0.029300 ACATGCGTGACAAACAGCAC 59.971 50.000 14.17 0.00 39.77 4.40
4279 4982 1.991121 AGTACTCACAAGACCCACGA 58.009 50.000 0.00 0.00 0.00 4.35
4356 5061 1.982395 ATGTGCGAGAGAACCCGGA 60.982 57.895 0.73 0.00 39.64 5.14
4357 5062 1.811266 CATGTGCGAGAGAACCCGG 60.811 63.158 0.00 0.00 39.64 5.73
4358 5063 1.811266 CCATGTGCGAGAGAACCCG 60.811 63.158 0.00 0.00 39.64 5.28
4359 5064 2.109126 GCCATGTGCGAGAGAACCC 61.109 63.158 0.00 0.00 39.64 4.11
4366 5071 4.801019 CTCCATAGGAGCCATGTGCGAG 62.801 59.091 0.00 0.00 43.29 5.03
4432 5142 7.485418 ACGATACTCTATAGGATCTAATGCG 57.515 40.000 0.00 0.00 40.51 4.73
4438 5148 5.571285 TGGCAACGATACTCTATAGGATCT 58.429 41.667 0.00 0.00 40.51 2.75
4445 5155 4.471548 AGTACCTGGCAACGATACTCTAT 58.528 43.478 0.00 0.00 42.51 1.98
4447 5157 2.736347 AGTACCTGGCAACGATACTCT 58.264 47.619 0.00 0.00 42.51 3.24
4462 5172 3.120060 CGGTGCCGATACATAGTAGTACC 60.120 52.174 4.35 0.00 42.83 3.34
4484 5197 1.670087 CGTCTGATGGCCGTGGATATC 60.670 57.143 0.00 0.00 0.00 1.63
4505 5219 1.461127 CCGTTGAAGTTGCTCTAGTGC 59.539 52.381 9.86 9.86 0.00 4.40
4506 5220 2.069273 CCCGTTGAAGTTGCTCTAGTG 58.931 52.381 0.00 0.00 0.00 2.74
4507 5221 1.002087 CCCCGTTGAAGTTGCTCTAGT 59.998 52.381 0.00 0.00 0.00 2.57
4508 5222 1.726853 CCCCGTTGAAGTTGCTCTAG 58.273 55.000 0.00 0.00 0.00 2.43
4509 5223 0.321298 GCCCCGTTGAAGTTGCTCTA 60.321 55.000 0.00 0.00 0.00 2.43
4510 5224 1.600916 GCCCCGTTGAAGTTGCTCT 60.601 57.895 0.00 0.00 0.00 4.09
4511 5225 2.954611 GCCCCGTTGAAGTTGCTC 59.045 61.111 0.00 0.00 0.00 4.26
4512 5226 2.748058 ATCGCCCCGTTGAAGTTGCT 62.748 55.000 0.00 0.00 0.00 3.91
4513 5227 2.253414 GATCGCCCCGTTGAAGTTGC 62.253 60.000 0.00 0.00 0.00 4.17
4514 5228 1.644786 GGATCGCCCCGTTGAAGTTG 61.645 60.000 0.00 0.00 0.00 3.16
4515 5229 1.376812 GGATCGCCCCGTTGAAGTT 60.377 57.895 0.00 0.00 0.00 2.66
4516 5230 1.910580 ATGGATCGCCCCGTTGAAGT 61.911 55.000 0.00 0.00 0.00 3.01
4517 5231 0.748005 AATGGATCGCCCCGTTGAAG 60.748 55.000 0.46 0.00 34.32 3.02
4518 5232 0.322997 AAATGGATCGCCCCGTTGAA 60.323 50.000 1.91 0.00 35.70 2.69
4519 5233 0.746563 GAAATGGATCGCCCCGTTGA 60.747 55.000 1.91 0.00 35.70 3.18
4520 5234 1.727467 GAAATGGATCGCCCCGTTG 59.273 57.895 1.91 0.00 35.70 4.10
4521 5235 1.817941 CGAAATGGATCGCCCCGTT 60.818 57.895 0.00 0.00 37.03 4.44
4522 5236 2.203015 CGAAATGGATCGCCCCGT 60.203 61.111 0.00 0.00 35.85 5.28
4523 5237 2.203015 ACGAAATGGATCGCCCCG 60.203 61.111 0.00 0.00 46.51 5.73
4524 5238 1.892391 GGACGAAATGGATCGCCCC 60.892 63.158 0.00 0.00 46.51 5.80
4525 5239 2.244651 CGGACGAAATGGATCGCCC 61.245 63.158 0.00 0.00 46.51 6.13
4526 5240 2.882366 GCGGACGAAATGGATCGCC 61.882 63.158 0.00 0.00 46.51 5.54
4527 5241 2.626455 GCGGACGAAATGGATCGC 59.374 61.111 0.00 0.00 46.51 4.58
4529 5243 2.882366 GCCGCGGACGAAATGGATC 61.882 63.158 33.48 1.41 43.93 3.36
4530 5244 2.895372 GCCGCGGACGAAATGGAT 60.895 61.111 33.48 0.00 43.93 3.41
4545 5259 3.192922 CGATCCAAACGGACGGCC 61.193 66.667 0.00 0.00 34.62 6.13
4552 5266 2.433491 TCCACGCCGATCCAAACG 60.433 61.111 0.00 0.00 0.00 3.60
4553 5267 1.635663 CTGTCCACGCCGATCCAAAC 61.636 60.000 0.00 0.00 0.00 2.93
4554 5268 1.375396 CTGTCCACGCCGATCCAAA 60.375 57.895 0.00 0.00 0.00 3.28
4555 5269 1.822114 TTCTGTCCACGCCGATCCAA 61.822 55.000 0.00 0.00 0.00 3.53
4556 5270 1.822114 TTTCTGTCCACGCCGATCCA 61.822 55.000 0.00 0.00 0.00 3.41
4557 5271 0.672401 TTTTCTGTCCACGCCGATCC 60.672 55.000 0.00 0.00 0.00 3.36
4558 5272 1.062587 CATTTTCTGTCCACGCCGATC 59.937 52.381 0.00 0.00 0.00 3.69
4559 5273 1.086696 CATTTTCTGTCCACGCCGAT 58.913 50.000 0.00 0.00 0.00 4.18
4560 5274 1.573829 GCATTTTCTGTCCACGCCGA 61.574 55.000 0.00 0.00 0.00 5.54
4561 5275 1.154225 GCATTTTCTGTCCACGCCG 60.154 57.895 0.00 0.00 0.00 6.46
4562 5276 1.154225 CGCATTTTCTGTCCACGCC 60.154 57.895 0.00 0.00 0.00 5.68
4563 5277 1.154225 CCGCATTTTCTGTCCACGC 60.154 57.895 0.00 0.00 0.00 5.34
4564 5278 1.154225 GCCGCATTTTCTGTCCACG 60.154 57.895 0.00 0.00 0.00 4.94
4565 5279 1.212751 GGCCGCATTTTCTGTCCAC 59.787 57.895 0.00 0.00 0.00 4.02
4566 5280 0.326595 TAGGCCGCATTTTCTGTCCA 59.673 50.000 0.00 0.00 0.00 4.02
4567 5281 1.132453 GTTAGGCCGCATTTTCTGTCC 59.868 52.381 0.00 0.00 0.00 4.02
4568 5282 1.202031 CGTTAGGCCGCATTTTCTGTC 60.202 52.381 0.00 0.00 0.00 3.51
4569 5283 0.802494 CGTTAGGCCGCATTTTCTGT 59.198 50.000 0.00 0.00 0.00 3.41
4570 5284 3.604130 CGTTAGGCCGCATTTTCTG 57.396 52.632 0.00 0.00 0.00 3.02
4579 5293 3.484547 GGTCAACGCGTTAGGCCG 61.485 66.667 26.11 12.22 38.94 6.13
4580 5294 3.122971 GGGTCAACGCGTTAGGCC 61.123 66.667 26.11 26.35 38.94 5.19
4581 5295 1.508808 TTTGGGTCAACGCGTTAGGC 61.509 55.000 26.11 19.36 38.69 3.93
4582 5296 0.236449 GTTTGGGTCAACGCGTTAGG 59.764 55.000 26.11 13.84 0.00 2.69
4583 5297 0.111001 CGTTTGGGTCAACGCGTTAG 60.111 55.000 26.11 18.40 0.00 2.34
4584 5298 0.529337 TCGTTTGGGTCAACGCGTTA 60.529 50.000 26.11 10.52 0.00 3.18
4585 5299 1.814586 TCGTTTGGGTCAACGCGTT 60.815 52.632 20.79 20.79 0.00 4.84
4586 5300 2.202905 TCGTTTGGGTCAACGCGT 60.203 55.556 5.58 5.58 0.00 6.01
4587 5301 2.247267 GTCGTTTGGGTCAACGCG 59.753 61.111 3.53 3.53 0.00 6.01
4588 5302 2.635338 GGTCGTTTGGGTCAACGC 59.365 61.111 1.10 0.00 0.00 4.84
4589 5303 1.096386 TTGGGTCGTTTGGGTCAACG 61.096 55.000 0.00 0.00 0.00 4.10
4590 5304 1.104630 TTTGGGTCGTTTGGGTCAAC 58.895 50.000 0.00 0.00 0.00 3.18
4591 5305 1.104630 GTTTGGGTCGTTTGGGTCAA 58.895 50.000 0.00 0.00 0.00 3.18
4592 5306 1.096386 CGTTTGGGTCGTTTGGGTCA 61.096 55.000 0.00 0.00 0.00 4.02
4593 5307 1.650363 CGTTTGGGTCGTTTGGGTC 59.350 57.895 0.00 0.00 0.00 4.46
4594 5308 1.824760 CCGTTTGGGTCGTTTGGGT 60.825 57.895 0.00 0.00 0.00 4.51
4595 5309 1.526455 TCCGTTTGGGTCGTTTGGG 60.526 57.895 0.00 0.00 37.00 4.12
4596 5310 1.650363 GTCCGTTTGGGTCGTTTGG 59.350 57.895 0.00 0.00 37.00 3.28
4597 5311 1.277440 CGTCCGTTTGGGTCGTTTG 59.723 57.895 0.00 0.00 41.57 2.93
4598 5312 3.721851 CGTCCGTTTGGGTCGTTT 58.278 55.556 0.00 0.00 41.57 3.60
4612 5326 2.496171 GAAAAACGGACGCGCGTC 60.496 61.111 45.60 45.60 43.87 5.19
4613 5327 4.344109 CGAAAAACGGACGCGCGT 62.344 61.111 38.52 38.52 38.46 6.01
4619 5333 3.285776 CCGCGGACGAAAAACGGAC 62.286 63.158 24.07 0.00 46.71 4.79
4620 5334 3.037249 CCGCGGACGAAAAACGGA 61.037 61.111 24.07 0.00 46.71 4.69
4623 5337 4.729798 CGCCCGCGGACGAAAAAC 62.730 66.667 30.91 4.71 43.93 2.43
4624 5338 4.965348 TCGCCCGCGGACGAAAAA 62.965 61.111 34.30 11.97 43.93 1.94
4642 5356 4.440112 GGCTAAAAATGAACCGAGAATGGG 60.440 45.833 0.00 0.00 41.29 4.00
4643 5357 4.399303 AGGCTAAAAATGAACCGAGAATGG 59.601 41.667 0.00 0.00 0.00 3.16
4644 5358 5.123820 TCAGGCTAAAAATGAACCGAGAATG 59.876 40.000 0.00 0.00 0.00 2.67
4645 5359 5.253330 TCAGGCTAAAAATGAACCGAGAAT 58.747 37.500 0.00 0.00 0.00 2.40
4646 5360 4.647611 TCAGGCTAAAAATGAACCGAGAA 58.352 39.130 0.00 0.00 0.00 2.87
4647 5361 4.280436 TCAGGCTAAAAATGAACCGAGA 57.720 40.909 0.00 0.00 0.00 4.04
4648 5362 5.567138 AATCAGGCTAAAAATGAACCGAG 57.433 39.130 0.00 0.00 0.00 4.63
4649 5363 5.708948 CAAATCAGGCTAAAAATGAACCGA 58.291 37.500 0.00 0.00 0.00 4.69
4650 5364 4.327087 GCAAATCAGGCTAAAAATGAACCG 59.673 41.667 0.00 0.00 0.00 4.44
4651 5365 4.327087 CGCAAATCAGGCTAAAAATGAACC 59.673 41.667 0.00 0.00 0.00 3.62
4652 5366 4.923281 ACGCAAATCAGGCTAAAAATGAAC 59.077 37.500 0.00 0.00 0.00 3.18
4653 5367 5.132897 ACGCAAATCAGGCTAAAAATGAA 57.867 34.783 0.00 0.00 0.00 2.57
4654 5368 4.671508 CGACGCAAATCAGGCTAAAAATGA 60.672 41.667 0.00 0.00 0.00 2.57
4655 5369 3.543494 CGACGCAAATCAGGCTAAAAATG 59.457 43.478 0.00 0.00 0.00 2.32
4656 5370 3.427503 CCGACGCAAATCAGGCTAAAAAT 60.428 43.478 0.00 0.00 0.00 1.82
4657 5371 2.095466 CCGACGCAAATCAGGCTAAAAA 60.095 45.455 0.00 0.00 0.00 1.94
4658 5372 1.466950 CCGACGCAAATCAGGCTAAAA 59.533 47.619 0.00 0.00 0.00 1.52
4659 5373 1.083489 CCGACGCAAATCAGGCTAAA 58.917 50.000 0.00 0.00 0.00 1.85
4660 5374 1.366111 GCCGACGCAAATCAGGCTAA 61.366 55.000 0.00 0.00 44.06 3.09
4661 5375 1.813753 GCCGACGCAAATCAGGCTA 60.814 57.895 0.00 0.00 44.06 3.93
4662 5376 3.127533 GCCGACGCAAATCAGGCT 61.128 61.111 0.00 0.00 44.06 4.58
4663 5377 4.520846 CGCCGACGCAAATCAGGC 62.521 66.667 0.00 0.00 44.00 4.85
4702 5416 4.914420 CAGGAGTAGGCGAGCGCG 62.914 72.222 5.14 5.14 43.06 6.86
4703 5417 3.759766 GACAGGAGTAGGCGAGCGC 62.760 68.421 6.27 6.27 41.06 5.92
4704 5418 2.409651 GACAGGAGTAGGCGAGCG 59.590 66.667 0.00 0.00 0.00 5.03
4705 5419 2.787567 GGGACAGGAGTAGGCGAGC 61.788 68.421 0.00 0.00 0.00 5.03
4706 5420 2.128507 GGGGACAGGAGTAGGCGAG 61.129 68.421 0.00 0.00 0.00 5.03
4707 5421 2.043248 GGGGACAGGAGTAGGCGA 60.043 66.667 0.00 0.00 0.00 5.54
4708 5422 3.528370 CGGGGACAGGAGTAGGCG 61.528 72.222 0.00 0.00 0.00 5.52
4709 5423 3.155167 CCGGGGACAGGAGTAGGC 61.155 72.222 0.00 0.00 0.00 3.93
4710 5424 2.444140 CCCGGGGACAGGAGTAGG 60.444 72.222 14.71 0.00 0.00 3.18
4711 5425 3.155167 GCCCGGGGACAGGAGTAG 61.155 72.222 25.28 0.00 0.00 2.57
4712 5426 4.791069 GGCCCGGGGACAGGAGTA 62.791 72.222 25.28 0.00 0.00 2.59
4717 5431 4.722700 CAACAGGCCCGGGGACAG 62.723 72.222 23.94 17.11 29.21 3.51
4722 5436 4.722700 CAGACCAACAGGCCCGGG 62.723 72.222 19.09 19.09 0.00 5.73
4723 5437 3.953775 ACAGACCAACAGGCCCGG 61.954 66.667 0.00 0.00 0.00 5.73
4724 5438 2.669569 CACAGACCAACAGGCCCG 60.670 66.667 0.00 0.00 0.00 6.13
4725 5439 2.282462 CCACAGACCAACAGGCCC 60.282 66.667 0.00 0.00 0.00 5.80
4726 5440 2.985847 GCCACAGACCAACAGGCC 60.986 66.667 0.00 0.00 39.42 5.19
4727 5441 2.203337 TGCCACAGACCAACAGGC 60.203 61.111 0.00 0.00 45.41 4.85
4728 5442 0.538057 ATGTGCCACAGACCAACAGG 60.538 55.000 3.00 0.00 0.00 4.00
4729 5443 1.001048 CAATGTGCCACAGACCAACAG 60.001 52.381 3.00 0.00 0.00 3.16
4730 5444 1.031235 CAATGTGCCACAGACCAACA 58.969 50.000 3.00 0.00 0.00 3.33
4731 5445 0.314935 CCAATGTGCCACAGACCAAC 59.685 55.000 3.00 0.00 0.00 3.77
4732 5446 1.462731 GCCAATGTGCCACAGACCAA 61.463 55.000 3.00 0.00 0.00 3.67
4733 5447 1.902918 GCCAATGTGCCACAGACCA 60.903 57.895 3.00 0.00 0.00 4.02
4734 5448 2.964978 GCCAATGTGCCACAGACC 59.035 61.111 3.00 0.00 0.00 3.85
4742 5456 2.054453 GGAAGGGAGGCCAATGTGC 61.054 63.158 5.01 0.00 0.00 4.57
4743 5457 0.394899 GAGGAAGGGAGGCCAATGTG 60.395 60.000 5.01 0.00 0.00 3.21
4744 5458 0.551131 AGAGGAAGGGAGGCCAATGT 60.551 55.000 5.01 0.00 0.00 2.71
4745 5459 0.182299 GAGAGGAAGGGAGGCCAATG 59.818 60.000 5.01 0.00 0.00 2.82
4746 5460 1.341156 CGAGAGGAAGGGAGGCCAAT 61.341 60.000 5.01 0.00 0.00 3.16
4747 5461 1.990060 CGAGAGGAAGGGAGGCCAA 60.990 63.158 5.01 0.00 0.00 4.52
4748 5462 2.364317 CGAGAGGAAGGGAGGCCA 60.364 66.667 5.01 0.00 0.00 5.36
4760 5474 1.439679 GGTTACTTGTTGGCCGAGAG 58.560 55.000 0.00 0.00 0.00 3.20
4761 5475 0.035739 GGGTTACTTGTTGGCCGAGA 59.964 55.000 0.00 0.00 0.00 4.04
4762 5476 0.036306 AGGGTTACTTGTTGGCCGAG 59.964 55.000 0.00 0.00 0.00 4.63
4763 5477 0.035739 GAGGGTTACTTGTTGGCCGA 59.964 55.000 0.00 0.00 0.00 5.54
4764 5478 1.296056 CGAGGGTTACTTGTTGGCCG 61.296 60.000 0.00 0.00 0.00 6.13
4765 5479 1.583495 GCGAGGGTTACTTGTTGGCC 61.583 60.000 0.00 0.00 32.77 5.36
4766 5480 1.583495 GGCGAGGGTTACTTGTTGGC 61.583 60.000 0.00 0.00 32.77 4.52
4767 5481 0.958876 GGGCGAGGGTTACTTGTTGG 60.959 60.000 0.00 0.00 32.77 3.77
4768 5482 0.958876 GGGGCGAGGGTTACTTGTTG 60.959 60.000 0.00 0.00 32.77 3.33
4769 5483 1.377612 GGGGCGAGGGTTACTTGTT 59.622 57.895 0.00 0.00 32.77 2.83
4770 5484 2.599757 GGGGGCGAGGGTTACTTGT 61.600 63.158 0.00 0.00 32.77 3.16
4771 5485 2.271173 GGGGGCGAGGGTTACTTG 59.729 66.667 0.00 0.00 0.00 3.16
4772 5486 3.396570 CGGGGGCGAGGGTTACTT 61.397 66.667 0.00 0.00 0.00 2.24
4806 5520 2.202298 GCAAAATGGACGACGGCG 60.202 61.111 10.39 10.39 44.79 6.46
4807 5521 2.178273 GGCAAAATGGACGACGGC 59.822 61.111 0.00 0.00 0.00 5.68
4808 5522 2.478746 CGGCAAAATGGACGACGG 59.521 61.111 0.00 0.00 43.61 4.79
4809 5523 2.478746 CCGGCAAAATGGACGACG 59.521 61.111 0.00 0.00 43.61 5.12
4810 5524 1.022451 TAGCCGGCAAAATGGACGAC 61.022 55.000 31.54 0.00 43.61 4.34
4811 5525 1.022451 GTAGCCGGCAAAATGGACGA 61.022 55.000 31.54 0.00 43.61 4.20
4812 5526 1.024579 AGTAGCCGGCAAAATGGACG 61.025 55.000 31.54 0.00 39.58 4.79
4813 5527 0.733150 GAGTAGCCGGCAAAATGGAC 59.267 55.000 31.54 13.79 0.00 4.02
4814 5528 0.618458 AGAGTAGCCGGCAAAATGGA 59.382 50.000 31.54 0.79 0.00 3.41
4815 5529 1.401905 GAAGAGTAGCCGGCAAAATGG 59.598 52.381 31.54 0.00 0.00 3.16
4816 5530 1.401905 GGAAGAGTAGCCGGCAAAATG 59.598 52.381 31.54 0.00 0.00 2.32
4817 5531 1.004277 TGGAAGAGTAGCCGGCAAAAT 59.996 47.619 31.54 16.13 0.00 1.82
4818 5532 0.398696 TGGAAGAGTAGCCGGCAAAA 59.601 50.000 31.54 11.09 0.00 2.44
4819 5533 0.036388 CTGGAAGAGTAGCCGGCAAA 60.036 55.000 31.54 14.16 34.07 3.68
4820 5534 1.596934 CTGGAAGAGTAGCCGGCAA 59.403 57.895 31.54 0.88 34.07 4.52
4821 5535 3.298958 CTGGAAGAGTAGCCGGCA 58.701 61.111 31.54 12.31 34.07 5.69
4823 5537 1.142748 CAGCTGGAAGAGTAGCCGG 59.857 63.158 5.57 0.00 40.76 6.13
4824 5538 1.520342 GCAGCTGGAAGAGTAGCCG 60.520 63.158 17.12 0.00 40.76 5.52
4825 5539 1.153269 GGCAGCTGGAAGAGTAGCC 60.153 63.158 17.12 2.59 40.76 3.93
4826 5540 1.520342 CGGCAGCTGGAAGAGTAGC 60.520 63.158 17.12 0.00 40.18 3.58
4827 5541 1.520342 GCGGCAGCTGGAAGAGTAG 60.520 63.158 17.12 0.00 41.01 2.57
4828 5542 2.579201 GCGGCAGCTGGAAGAGTA 59.421 61.111 17.12 0.00 41.01 2.59
4829 5543 4.400961 GGCGGCAGCTGGAAGAGT 62.401 66.667 17.12 0.00 44.37 3.24
4839 5553 2.512286 ATGTGATGACGGCGGCAG 60.512 61.111 24.18 0.00 0.00 4.85
4840 5554 2.511373 GATGTGATGACGGCGGCA 60.511 61.111 21.84 21.84 0.00 5.69
4841 5555 3.272334 GGATGTGATGACGGCGGC 61.272 66.667 13.24 9.67 0.00 6.53
4842 5556 2.961721 CGGATGTGATGACGGCGG 60.962 66.667 13.24 0.00 0.00 6.13
4843 5557 3.630148 GCGGATGTGATGACGGCG 61.630 66.667 4.80 4.80 0.00 6.46
4844 5558 3.272334 GGCGGATGTGATGACGGC 61.272 66.667 0.00 0.00 44.25 5.68
4845 5559 2.588877 GGGCGGATGTGATGACGG 60.589 66.667 0.00 0.00 0.00 4.79
4846 5560 1.884464 CTGGGCGGATGTGATGACG 60.884 63.158 0.00 0.00 0.00 4.35
4847 5561 2.182842 GCTGGGCGGATGTGATGAC 61.183 63.158 0.00 0.00 0.00 3.06
4848 5562 2.190313 GCTGGGCGGATGTGATGA 59.810 61.111 0.00 0.00 0.00 2.92
4849 5563 1.750018 TTGCTGGGCGGATGTGATG 60.750 57.895 0.00 0.00 0.00 3.07
4850 5564 1.750399 GTTGCTGGGCGGATGTGAT 60.750 57.895 0.00 0.00 0.00 3.06
4851 5565 2.359850 GTTGCTGGGCGGATGTGA 60.360 61.111 0.00 0.00 0.00 3.58
4852 5566 2.672651 TGTTGCTGGGCGGATGTG 60.673 61.111 0.00 0.00 0.00 3.21
4853 5567 2.672996 GTGTTGCTGGGCGGATGT 60.673 61.111 0.00 0.00 0.00 3.06
4854 5568 3.443045 GGTGTTGCTGGGCGGATG 61.443 66.667 0.00 0.00 0.00 3.51
4861 5575 3.751246 CATGGGCGGTGTTGCTGG 61.751 66.667 0.00 0.00 34.52 4.85
4862 5576 2.672651 TCATGGGCGGTGTTGCTG 60.673 61.111 0.00 0.00 34.52 4.41
4863 5577 2.672996 GTCATGGGCGGTGTTGCT 60.673 61.111 0.00 0.00 34.52 3.91
4864 5578 3.747976 GGTCATGGGCGGTGTTGC 61.748 66.667 0.00 0.00 0.00 4.17
4865 5579 3.061848 GGGTCATGGGCGGTGTTG 61.062 66.667 0.00 0.00 0.00 3.33
4866 5580 3.567579 CTGGGTCATGGGCGGTGTT 62.568 63.158 0.00 0.00 0.00 3.32
4867 5581 4.033776 CTGGGTCATGGGCGGTGT 62.034 66.667 0.00 0.00 0.00 4.16
4868 5582 3.976701 GACTGGGTCATGGGCGGTG 62.977 68.421 0.00 0.00 32.09 4.94
4869 5583 3.717294 GACTGGGTCATGGGCGGT 61.717 66.667 0.00 0.00 32.09 5.68
4870 5584 4.838152 CGACTGGGTCATGGGCGG 62.838 72.222 0.00 0.00 32.09 6.13
4871 5585 4.082523 ACGACTGGGTCATGGGCG 62.083 66.667 0.00 0.00 32.09 6.13
4872 5586 2.125106 GACGACTGGGTCATGGGC 60.125 66.667 0.00 0.00 36.91 5.36
4873 5587 2.584608 GGACGACTGGGTCATGGG 59.415 66.667 0.00 0.00 38.70 4.00
4874 5588 2.184322 CGGACGACTGGGTCATGG 59.816 66.667 0.00 0.00 38.70 3.66
4875 5589 2.509336 GCGGACGACTGGGTCATG 60.509 66.667 0.00 0.00 38.70 3.07
4876 5590 3.771160 GGCGGACGACTGGGTCAT 61.771 66.667 0.00 0.00 38.70 3.06
4897 5611 4.660938 ACCAGTTTGCTCCCCGGC 62.661 66.667 0.00 0.00 0.00 6.13
4898 5612 1.971695 GAACCAGTTTGCTCCCCGG 60.972 63.158 0.00 0.00 0.00 5.73
4899 5613 1.971695 GGAACCAGTTTGCTCCCCG 60.972 63.158 0.00 0.00 0.00 5.73
4900 5614 4.097218 GGAACCAGTTTGCTCCCC 57.903 61.111 0.00 0.00 0.00 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.