Multiple sequence alignment - TraesCS4A01G083300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G083300 chr4A 100.000 9945 0 0 1 9945 87401851 87391907 0.000000e+00 18366.0
1 TraesCS4A01G083300 chr4A 94.531 128 7 0 6619 6746 652193838 652193711 2.190000e-46 198.0
2 TraesCS4A01G083300 chr4D 95.025 7075 243 54 2544 9572 378275873 378282884 0.000000e+00 11014.0
3 TraesCS4A01G083300 chr4D 89.701 2010 121 29 598 2548 378273842 378275824 0.000000e+00 2486.0
4 TraesCS4A01G083300 chr4D 91.879 431 31 3 5847 6275 31720030 31720458 5.140000e-167 599.0
5 TraesCS4A01G083300 chr4D 84.737 190 11 7 9755 9943 378282945 378283117 3.690000e-39 174.0
6 TraesCS4A01G083300 chr4B 95.446 3316 124 14 2775 6077 464219899 464223200 0.000000e+00 5262.0
7 TraesCS4A01G083300 chr4B 92.888 2784 123 40 6745 9511 464223860 464226585 0.000000e+00 3975.0
8 TraesCS4A01G083300 chr4B 89.347 2619 145 44 1 2546 464217239 464219796 0.000000e+00 3168.0
9 TraesCS4A01G083300 chr4B 93.812 501 25 5 6075 6571 464223346 464223844 0.000000e+00 749.0
10 TraesCS4A01G083300 chr7A 88.795 946 79 13 5339 6275 195749405 195750332 0.000000e+00 1134.0
11 TraesCS4A01G083300 chr7A 84.574 188 25 2 1171 1356 393765165 393765350 6.140000e-42 183.0
12 TraesCS4A01G083300 chr7A 87.059 85 6 3 9592 9671 148926726 148926642 3.830000e-14 91.6
13 TraesCS4A01G083300 chr3D 87.387 555 48 7 5339 5893 511668472 511669004 1.420000e-172 617.0
14 TraesCS4A01G083300 chr3D 85.870 92 6 3 9588 9672 191556910 191557001 3.830000e-14 91.6
15 TraesCS4A01G083300 chr3B 91.647 431 32 3 5847 6275 464163258 464162830 2.390000e-165 593.0
16 TraesCS4A01G083300 chr3B 91.183 431 34 3 5847 6275 464330242 464329814 5.180000e-162 582.0
17 TraesCS4A01G083300 chr3B 90.769 130 12 0 6619 6748 489979059 489979188 3.690000e-39 174.0
18 TraesCS4A01G083300 chr2B 91.415 431 33 3 5847 6275 23342670 23343098 1.110000e-163 588.0
19 TraesCS4A01G083300 chr2B 90.977 133 12 0 6619 6751 117888276 117888408 7.940000e-41 180.0
20 TraesCS4A01G083300 chr2B 89.552 134 14 0 6619 6752 708240645 708240512 4.780000e-38 171.0
21 TraesCS4A01G083300 chr2B 85.227 88 7 5 9590 9671 597550113 597550200 1.780000e-12 86.1
22 TraesCS4A01G083300 chr2B 83.673 98 8 5 9590 9681 749205333 749205238 1.780000e-12 86.1
23 TraesCS4A01G083300 chr3A 90.951 431 35 3 5847 6275 478051747 478051319 2.410000e-160 577.0
24 TraesCS4A01G083300 chr1D 90.487 431 37 3 5847 6275 455511640 455512068 5.210000e-157 566.0
25 TraesCS4A01G083300 chr7B 88.509 322 34 3 7553 7874 658199880 658199562 4.360000e-103 387.0
26 TraesCS4A01G083300 chr7B 84.066 182 29 0 1177 1358 323209829 323209648 1.030000e-39 176.0
27 TraesCS4A01G083300 chr7B 87.356 87 5 5 9591 9671 713437706 713437620 2.960000e-15 95.3
28 TraesCS4A01G083300 chr6B 88.235 323 35 3 7553 7875 660380162 660380481 5.640000e-102 383.0
29 TraesCS4A01G083300 chr7D 93.701 127 8 0 6621 6747 566026611 566026737 3.670000e-44 191.0
30 TraesCS4A01G083300 chr7D 84.615 182 28 0 1177 1358 363560259 363560078 2.210000e-41 182.0
31 TraesCS4A01G083300 chr5D 90.511 137 10 2 6619 6754 280785797 280785931 2.850000e-40 178.0
32 TraesCS4A01G083300 chr5D 90.076 131 13 0 6619 6749 482291807 482291937 4.780000e-38 171.0
33 TraesCS4A01G083300 chr5D 88.372 86 4 5 9592 9671 480359905 480359820 2.290000e-16 99.0
34 TraesCS4A01G083300 chr2A 90.977 133 9 2 6619 6749 70985618 70985749 1.030000e-39 176.0
35 TraesCS4A01G083300 chr2A 86.667 90 5 4 9589 9671 551528545 551528456 1.060000e-14 93.5
36 TraesCS4A01G083300 chr5B 86.316 95 5 6 9589 9676 689206377 689206470 8.220000e-16 97.1
37 TraesCS4A01G083300 chr5B 85.870 92 7 4 9587 9673 39514850 39514760 1.060000e-14 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G083300 chr4A 87391907 87401851 9944 True 18366.0 18366 100.00000 1 9945 1 chr4A.!!$R1 9944
1 TraesCS4A01G083300 chr4D 378273842 378283117 9275 False 4558.0 11014 89.82100 598 9943 3 chr4D.!!$F2 9345
2 TraesCS4A01G083300 chr4B 464217239 464226585 9346 False 3288.5 5262 92.87325 1 9511 4 chr4B.!!$F1 9510
3 TraesCS4A01G083300 chr7A 195749405 195750332 927 False 1134.0 1134 88.79500 5339 6275 1 chr7A.!!$F1 936
4 TraesCS4A01G083300 chr3D 511668472 511669004 532 False 617.0 617 87.38700 5339 5893 1 chr3D.!!$F2 554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
359 369 0.367548 GCGTGCAGCGAACGTAATAA 59.632 50.000 11.94 0.0 44.77 1.40 F
1365 1403 0.034896 CGACAAGTAAGTGCAGGGGT 59.965 55.000 0.00 0.0 0.00 4.95 F
1625 1669 1.154197 GGCTCAAACCGTTACTGGAC 58.846 55.000 0.75 0.0 0.00 4.02 F
2261 2333 1.260561 CTTCGTGACGAGTTTTGTGGG 59.739 52.381 8.02 0.0 37.14 4.61 F
3294 3438 0.033601 TTCAACCTGCACCAACACCT 60.034 50.000 0.00 0.0 0.00 4.00 F
4707 4858 1.613630 CTAGGTGTGGGAGGCCACT 60.614 63.158 5.01 0.0 40.92 4.00 F
5386 5538 5.175491 GTGTGTGCTTATGTTGGTGAATTTG 59.825 40.000 0.00 0.0 0.00 2.32 F
7084 7416 2.152699 GTGACCGCAGACGATGACG 61.153 63.158 0.00 0.0 43.93 4.35 F
7978 8311 0.193574 TCAGGGACTCTCTGGGGTTT 59.806 55.000 6.07 0.0 34.60 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1905 1956 0.107268 TCAGCAGTTCAGCAGCAAGA 59.893 50.000 0.00 0.00 36.85 3.02 R
2715 2857 0.452987 CACCCAGGTTGATTGCATCG 59.547 55.000 0.00 0.00 0.00 3.84 R
2744 2886 1.145945 TCATCTAGGATGGAGCTCGGT 59.854 52.381 7.83 0.00 0.00 4.69 R
3578 3725 1.151450 AGACAACCCAACTGGCCTG 59.849 57.895 8.29 8.29 37.83 4.85 R
4731 4882 1.066573 ACAGGAGCTTCATGACCTTCG 60.067 52.381 0.00 0.00 31.79 3.79 R
5655 5814 1.215117 CCATGCGTGCGGGAAAAAT 59.785 52.632 0.00 0.00 0.00 1.82 R
7099 7431 1.308783 GGAAAGTAGCTGCTGGTGGC 61.309 60.000 13.43 0.00 42.22 5.01 R
8521 8860 0.603569 ACTACTGAGAGCCACAACGG 59.396 55.000 0.00 0.00 38.11 4.44 R
9411 9754 0.038744 AATGGGCAGACAACTGAGGG 59.961 55.000 0.00 0.00 46.03 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 4.229876 CCTCTGATTTTGCTTTTCGTTCC 58.770 43.478 0.00 0.00 0.00 3.62
81 82 4.593597 TTTCGTTCCGAATTATGCAGTC 57.406 40.909 0.00 0.00 45.28 3.51
87 88 2.006888 CCGAATTATGCAGTCGTTGGT 58.993 47.619 9.94 0.00 32.93 3.67
93 94 1.167851 ATGCAGTCGTTGGTTGGATG 58.832 50.000 0.00 0.00 0.00 3.51
95 96 0.517316 GCAGTCGTTGGTTGGATGTC 59.483 55.000 0.00 0.00 0.00 3.06
98 99 2.480419 CAGTCGTTGGTTGGATGTCTTC 59.520 50.000 0.00 0.00 0.00 2.87
157 158 0.914551 CGGAGTTCGTTCTGCGTATG 59.085 55.000 12.86 0.00 42.58 2.39
158 159 0.645868 GGAGTTCGTTCTGCGTATGC 59.354 55.000 0.00 0.00 42.13 3.14
159 160 0.645868 GAGTTCGTTCTGCGTATGCC 59.354 55.000 4.05 0.00 41.78 4.40
169 170 3.279116 CGTATGCCACCCATGCCG 61.279 66.667 0.00 0.00 33.51 5.69
171 172 1.453015 GTATGCCACCCATGCCGAA 60.453 57.895 0.00 0.00 35.34 4.30
189 190 0.967380 AAAAAGATCCGGCAGCAGGG 60.967 55.000 12.14 3.38 0.00 4.45
200 201 1.078848 CAGCAGGGTCGGAAAGGAG 60.079 63.158 0.00 0.00 0.00 3.69
201 202 2.269241 GCAGGGTCGGAAAGGAGG 59.731 66.667 0.00 0.00 0.00 4.30
202 203 2.291043 GCAGGGTCGGAAAGGAGGA 61.291 63.158 0.00 0.00 0.00 3.71
207 208 2.687566 TCGGAAAGGAGGAGCCCC 60.688 66.667 0.00 0.00 37.37 5.80
208 209 4.162690 CGGAAAGGAGGAGCCCCG 62.163 72.222 0.00 0.00 37.37 5.73
289 299 1.581934 ATCGTTGGGATATGTGCGTG 58.418 50.000 0.00 0.00 32.17 5.34
290 300 1.087202 TCGTTGGGATATGTGCGTGC 61.087 55.000 0.00 0.00 0.00 5.34
308 318 1.271325 TGCATATATGGCAGGTTCCGG 60.271 52.381 14.51 0.00 36.11 5.14
325 335 2.500098 TCCGGAACAGATCTAGGGTTTG 59.500 50.000 0.00 0.00 0.00 2.93
326 336 2.420129 CCGGAACAGATCTAGGGTTTGG 60.420 54.545 0.00 0.00 0.00 3.28
327 337 2.420129 CGGAACAGATCTAGGGTTTGGG 60.420 54.545 0.00 0.00 0.00 4.12
328 338 2.576648 GGAACAGATCTAGGGTTTGGGT 59.423 50.000 0.00 0.00 0.00 4.51
329 339 3.010250 GGAACAGATCTAGGGTTTGGGTT 59.990 47.826 0.00 0.00 0.00 4.11
330 340 4.262617 GAACAGATCTAGGGTTTGGGTTC 58.737 47.826 0.00 0.00 0.00 3.62
357 367 2.776072 GCGTGCAGCGAACGTAAT 59.224 55.556 11.94 0.00 44.77 1.89
358 368 1.992947 GCGTGCAGCGAACGTAATA 59.007 52.632 11.94 0.00 44.77 0.98
359 369 0.367548 GCGTGCAGCGAACGTAATAA 59.632 50.000 11.94 0.00 44.77 1.40
367 377 1.266696 GCGAACGTAATAAGGCGTGTG 60.267 52.381 0.00 0.00 41.42 3.82
371 381 4.388790 GAACGTAATAAGGCGTGTGTTTC 58.611 43.478 0.00 0.00 41.42 2.78
376 386 5.910723 CGTAATAAGGCGTGTGTTTCTTTTT 59.089 36.000 0.00 0.00 0.00 1.94
396 406 3.944055 TTTCTTCTCTTCTCCTGTCCG 57.056 47.619 0.00 0.00 0.00 4.79
397 407 2.881111 TCTTCTCTTCTCCTGTCCGA 57.119 50.000 0.00 0.00 0.00 4.55
430 440 5.692204 AGATATTTTATCCTGCACGTTCTCG 59.308 40.000 0.00 0.00 43.34 4.04
453 463 3.353836 CGTTTGGGGAGTGTGCGG 61.354 66.667 0.00 0.00 0.00 5.69
523 534 5.579904 TCTCGTCTCGTCCGATATAAATAGG 59.420 44.000 0.00 0.00 33.27 2.57
537 548 5.930209 ATAAATAGGGGAATTCTGCTCCA 57.070 39.130 5.23 0.00 34.34 3.86
538 549 4.821532 AAATAGGGGAATTCTGCTCCAT 57.178 40.909 5.23 0.00 34.34 3.41
551 562 1.384082 CTCCATACCCCCGTTCCCT 60.384 63.158 0.00 0.00 0.00 4.20
600 611 2.444895 AGTCTCATCCTCCCGGCC 60.445 66.667 0.00 0.00 0.00 6.13
780 808 4.111053 GGGGAGGTTCCTTCCGCC 62.111 72.222 9.82 4.36 44.83 6.13
889 917 1.000717 TGAGCGATCGTGAACTGAACA 60.001 47.619 17.81 0.00 0.00 3.18
894 922 2.600420 CGATCGTGAACTGAACATGGAG 59.400 50.000 7.03 0.00 0.00 3.86
909 937 5.878406 ACATGGAGTCCGAATCTTATTCT 57.122 39.130 4.30 0.00 0.00 2.40
948 976 4.104143 CCGCAGGCTAGGTTTACG 57.896 61.111 0.00 0.00 46.14 3.18
952 980 1.600107 CAGGCTAGGTTTACGGCCA 59.400 57.895 2.24 0.00 42.48 5.36
953 981 0.462047 CAGGCTAGGTTTACGGCCAG 60.462 60.000 2.24 0.00 42.48 4.85
993 1021 3.075641 GGGTGAGGAGTCGGGGAC 61.076 72.222 0.00 0.00 0.00 4.46
1095 1123 3.882888 TCCACAAGTGAGTGATTCAAACC 59.117 43.478 0.94 0.00 42.05 3.27
1098 1126 2.558359 CAAGTGAGTGATTCAAACCCCC 59.442 50.000 0.00 0.00 37.61 5.40
1100 1128 1.886542 GTGAGTGATTCAAACCCCCAC 59.113 52.381 0.00 0.00 37.61 4.61
1101 1129 1.203001 TGAGTGATTCAAACCCCCACC 60.203 52.381 0.00 0.00 31.34 4.61
1102 1130 0.114364 AGTGATTCAAACCCCCACCC 59.886 55.000 0.00 0.00 0.00 4.61
1103 1131 0.902984 GTGATTCAAACCCCCACCCC 60.903 60.000 0.00 0.00 0.00 4.95
1163 1201 0.322008 CTCACTTGGAGCCCTTGTCC 60.322 60.000 0.00 0.00 36.69 4.02
1165 1203 1.464198 ACTTGGAGCCCTTGTCCCT 60.464 57.895 0.00 0.00 32.49 4.20
1168 1206 2.067932 TTGGAGCCCTTGTCCCTGTG 62.068 60.000 0.00 0.00 32.49 3.66
1175 1213 0.693049 CCTTGTCCCTGTGTAGGCTT 59.307 55.000 0.00 0.00 43.16 4.35
1190 1228 1.744741 GCTTGAGCAGGAGTCTGGC 60.745 63.158 0.00 0.00 41.19 4.85
1220 1258 5.661056 TCAACATGAAGTACTTCGAGGAT 57.339 39.130 26.35 14.11 42.28 3.24
1235 1273 2.502295 GAGGATGAGGTGATCAATGGC 58.498 52.381 0.00 0.00 42.53 4.40
1365 1403 0.034896 CGACAAGTAAGTGCAGGGGT 59.965 55.000 0.00 0.00 0.00 4.95
1375 1413 1.203262 AGTGCAGGGGTAAGAGGTGTA 60.203 52.381 0.00 0.00 0.00 2.90
1377 1415 1.837439 TGCAGGGGTAAGAGGTGTATG 59.163 52.381 0.00 0.00 0.00 2.39
1380 1418 3.069729 GCAGGGGTAAGAGGTGTATGTAG 59.930 52.174 0.00 0.00 0.00 2.74
1400 1443 6.472016 TGTAGAATTGTAAATGCTGGACTGA 58.528 36.000 0.00 0.00 0.00 3.41
1401 1444 6.939730 TGTAGAATTGTAAATGCTGGACTGAA 59.060 34.615 0.00 0.00 0.00 3.02
1407 1450 6.198650 TGTAAATGCTGGACTGAATTGATG 57.801 37.500 0.00 0.00 0.00 3.07
1408 1451 5.945191 TGTAAATGCTGGACTGAATTGATGA 59.055 36.000 0.00 0.00 0.00 2.92
1413 1456 4.197750 GCTGGACTGAATTGATGACTGAT 58.802 43.478 0.00 0.00 0.00 2.90
1417 1460 7.307870 GCTGGACTGAATTGATGACTGATTATC 60.308 40.741 0.00 0.00 0.00 1.75
1431 1474 7.453393 TGACTGATTATCTGTTCCTTTTCTGT 58.547 34.615 6.21 0.00 0.00 3.41
1571 1614 4.864247 GGTAAAATCTGCGTGATTGCATTT 59.136 37.500 5.67 0.65 43.99 2.32
1573 1616 1.917273 ATCTGCGTGATTGCATTTGC 58.083 45.000 0.00 0.00 45.26 3.68
1581 1624 4.086126 GCGTGATTGCATTTGCTTATAACG 60.086 41.667 16.81 16.81 40.38 3.18
1625 1669 1.154197 GGCTCAAACCGTTACTGGAC 58.846 55.000 0.75 0.00 0.00 4.02
1677 1721 3.044156 TGATAGGGAGAATGAGCAGCTT 58.956 45.455 0.00 0.00 0.00 3.74
1815 1859 8.915036 AGTTCTAGATTACGGACACTTATCAAT 58.085 33.333 0.00 0.00 0.00 2.57
1921 1972 2.719426 ATTTCTTGCTGCTGAACTGC 57.281 45.000 0.00 0.00 43.16 4.40
1943 1994 7.888021 ACTGCTGATGCTAGTTATAGATCTACT 59.112 37.037 4.10 3.07 40.48 2.57
1947 1998 8.740123 TGATGCTAGTTATAGATCTACTAGGC 57.260 38.462 23.50 18.05 40.93 3.93
2000 2072 6.840780 ACCCTCATTTCATCCTTTGTAAAG 57.159 37.500 0.00 0.00 35.79 1.85
2028 2100 9.914834 TGACCCAGTAAAATGTTATAAGCTAAT 57.085 29.630 0.00 0.00 0.00 1.73
2060 2132 2.490718 CCCACATTCTGTTCTCCCCAAA 60.491 50.000 0.00 0.00 0.00 3.28
2077 2149 6.465084 TCCCCAAATTTATTTAAACCAACCG 58.535 36.000 0.00 0.00 0.00 4.44
2079 2151 6.711194 CCCCAAATTTATTTAAACCAACCGTT 59.289 34.615 0.00 0.00 35.70 4.44
2146 2218 2.097825 GAGGGCTGCTGTTCATTCATT 58.902 47.619 0.00 0.00 0.00 2.57
2147 2219 2.494870 GAGGGCTGCTGTTCATTCATTT 59.505 45.455 0.00 0.00 0.00 2.32
2148 2220 2.901839 AGGGCTGCTGTTCATTCATTTT 59.098 40.909 0.00 0.00 0.00 1.82
2149 2221 3.325716 AGGGCTGCTGTTCATTCATTTTT 59.674 39.130 0.00 0.00 0.00 1.94
2150 2222 4.527816 AGGGCTGCTGTTCATTCATTTTTA 59.472 37.500 0.00 0.00 0.00 1.52
2151 2223 5.011943 AGGGCTGCTGTTCATTCATTTTTAA 59.988 36.000 0.00 0.00 0.00 1.52
2152 2224 5.349543 GGGCTGCTGTTCATTCATTTTTAAG 59.650 40.000 0.00 0.00 0.00 1.85
2153 2225 6.158598 GGCTGCTGTTCATTCATTTTTAAGA 58.841 36.000 0.00 0.00 0.00 2.10
2154 2226 6.646240 GGCTGCTGTTCATTCATTTTTAAGAA 59.354 34.615 0.00 0.00 0.00 2.52
2155 2227 7.148689 GGCTGCTGTTCATTCATTTTTAAGAAG 60.149 37.037 0.00 0.00 0.00 2.85
2156 2228 7.596248 GCTGCTGTTCATTCATTTTTAAGAAGA 59.404 33.333 0.00 0.00 0.00 2.87
2157 2229 9.635520 CTGCTGTTCATTCATTTTTAAGAAGAT 57.364 29.630 0.00 0.00 0.00 2.40
2213 2285 7.164803 TGTACATTGACACATCTCAACCATTA 58.835 34.615 0.00 0.00 32.95 1.90
2214 2286 6.748333 ACATTGACACATCTCAACCATTAG 57.252 37.500 0.00 0.00 32.95 1.73
2215 2287 5.649395 ACATTGACACATCTCAACCATTAGG 59.351 40.000 0.00 0.00 42.21 2.69
2245 2317 6.842163 ACATTGTAAATAAGGTTGCTCTTCG 58.158 36.000 0.00 0.00 0.00 3.79
2261 2333 1.260561 CTTCGTGACGAGTTTTGTGGG 59.739 52.381 8.02 0.00 37.14 4.61
2278 2350 5.097742 TGTGGGTCCTACAGTCATAAATG 57.902 43.478 3.50 0.00 0.00 2.32
2343 2415 6.925165 CAGCAGTCCAATACAATTTGAAGTTT 59.075 34.615 2.79 0.00 0.00 2.66
2379 2451 7.118723 AGAATCTCTGTATAAATTGCCACCAA 58.881 34.615 0.00 0.00 35.01 3.67
2386 2458 8.976353 TCTGTATAAATTGCCACCAATATTTGT 58.024 29.630 0.00 0.00 40.69 2.83
2426 2498 6.512342 TTTCTTTGGAACCGAAACTTGTAA 57.488 33.333 0.00 0.00 0.00 2.41
2542 2631 2.814919 CAGAGTCAGTCCTAGTTGACGT 59.185 50.000 11.37 0.00 46.34 4.34
2559 2701 6.095720 AGTTGACGTTTCTGGGTTTAATTTCA 59.904 34.615 0.00 0.00 0.00 2.69
2619 2761 3.075882 TGTTTGGATGTGGAGGGAAAGAT 59.924 43.478 0.00 0.00 0.00 2.40
2620 2762 3.652057 TTGGATGTGGAGGGAAAGATC 57.348 47.619 0.00 0.00 0.00 2.75
2648 2790 9.998106 TTAATTAAGAAGTCTATCTATGGGCAC 57.002 33.333 0.00 0.00 0.00 5.01
2652 2794 2.679082 AGTCTATCTATGGGCACGGTT 58.321 47.619 0.00 0.00 0.00 4.44
2702 2844 3.191162 GCAGCATGGTGAGTTATTGTCAA 59.809 43.478 28.34 0.00 35.86 3.18
2706 2848 5.182001 AGCATGGTGAGTTATTGTCAACTTC 59.818 40.000 0.00 0.00 38.86 3.01
2715 2857 7.862372 TGAGTTATTGTCAACTTCAATTTGCTC 59.138 33.333 0.00 0.00 38.86 4.26
2744 2886 1.978455 AACCTGGGTGTCACGCTCAA 61.978 55.000 19.55 0.46 31.67 3.02
2746 2888 1.961277 CTGGGTGTCACGCTCAACC 60.961 63.158 19.55 4.38 42.45 3.77
2759 2901 1.403814 CTCAACCGAGCTCCATCCTA 58.596 55.000 8.47 0.00 31.00 2.94
2781 2923 4.594854 ACATTGCGCCCCACCACA 62.595 61.111 4.18 0.00 0.00 4.17
2800 2942 1.826720 CATGCAAGGCCTAAACCATGT 59.173 47.619 5.16 0.00 30.98 3.21
2843 2985 4.383770 CCTGAGTGGGGTAATTAACACGAT 60.384 45.833 2.32 0.00 38.78 3.73
2915 3057 7.695618 TGCTTGTGAAATTGTTGTTATTTTTGC 59.304 29.630 0.00 0.00 0.00 3.68
2975 3117 5.454966 GACCCCACCATTAACTCCATTTAT 58.545 41.667 0.00 0.00 0.00 1.40
3043 3185 2.145536 CACCAGCTTTGCAAAAATCCC 58.854 47.619 13.84 0.00 0.00 3.85
3294 3438 0.033601 TTCAACCTGCACCAACACCT 60.034 50.000 0.00 0.00 0.00 4.00
3539 3686 2.485657 GGCTGCTAACCCTTCTATGGAC 60.486 54.545 0.00 0.00 0.00 4.02
3658 3805 2.684881 CCGCTATTGGATTCTTGCAGTT 59.315 45.455 0.00 0.00 0.00 3.16
3928 4075 6.422333 TGTCTGTGCCCATGATAAATCTTTA 58.578 36.000 0.00 0.00 0.00 1.85
3934 4081 8.659527 TGTGCCCATGATAAATCTTTATCTCTA 58.340 33.333 18.58 4.66 45.76 2.43
4116 4263 7.663905 AGGTTTGTTCACTGCAATATGTAGTTA 59.336 33.333 0.00 0.00 40.41 2.24
4117 4264 8.458843 GGTTTGTTCACTGCAATATGTAGTTAT 58.541 33.333 0.00 0.00 40.41 1.89
4224 4372 4.873827 ACCGTGTCAGTTAATCGCATAATT 59.126 37.500 0.00 0.00 0.00 1.40
4313 4462 8.204836 TCAAGTTAGCCCTCTTCTAATGTTATC 58.795 37.037 0.00 0.00 0.00 1.75
4636 4787 8.109634 AGTTTCTGTGATGGTATTAATTCTGGT 58.890 33.333 0.00 0.00 0.00 4.00
4707 4858 1.613630 CTAGGTGTGGGAGGCCACT 60.614 63.158 5.01 0.00 40.92 4.00
4731 4882 8.410912 ACTAGTGGAACAAAACAATTTACCTTC 58.589 33.333 0.00 0.00 44.16 3.46
5113 5265 7.768120 ACTCTTTTCTTGCCTCTATGTAGATTG 59.232 37.037 0.00 0.00 0.00 2.67
5122 5274 6.094048 TGCCTCTATGTAGATTGTTTTCTTGC 59.906 38.462 0.00 0.00 0.00 4.01
5233 5385 5.277345 GCGATCTATGGGTGTTGTACAATTC 60.277 44.000 12.26 7.88 0.00 2.17
5386 5538 5.175491 GTGTGTGCTTATGTTGGTGAATTTG 59.825 40.000 0.00 0.00 0.00 2.32
5396 5548 7.661127 ATGTTGGTGAATTTGTGATTTGATG 57.339 32.000 0.00 0.00 0.00 3.07
5594 5753 5.920273 GGAAAATCGTTCTTTTGATGCTTCA 59.080 36.000 0.00 0.00 0.00 3.02
5667 5826 5.310720 ACTTGAGATTATTTTTCCCGCAC 57.689 39.130 0.00 0.00 0.00 5.34
5829 5994 6.764308 TTTGATCCAGATTCATTTGGTCTC 57.236 37.500 0.00 0.00 35.89 3.36
5906 6071 5.119694 ACTCTGGACTTCTTTTGACAGAAC 58.880 41.667 0.00 0.00 34.90 3.01
6289 6604 4.514066 TGAAGCTATGCACATGCTTATCTG 59.486 41.667 18.48 0.00 45.56 2.90
6575 6891 5.009854 AGGTGAAATTCTGGTTGTTTGTG 57.990 39.130 0.00 0.00 0.00 3.33
6578 6894 4.032786 GTGAAATTCTGGTTGTTTGTGCAC 59.967 41.667 10.75 10.75 0.00 4.57
6583 6899 2.560542 TCTGGTTGTTTGTGCACAGTTT 59.439 40.909 20.59 0.00 0.00 2.66
6602 6918 7.115663 CACAGTTTCTCAGCTTTCTTACTACTC 59.884 40.741 0.00 0.00 0.00 2.59
6608 6924 3.769844 CAGCTTTCTTACTACTCCCTCCA 59.230 47.826 0.00 0.00 0.00 3.86
6610 6926 5.598830 CAGCTTTCTTACTACTCCCTCCATA 59.401 44.000 0.00 0.00 0.00 2.74
6611 6927 5.836358 AGCTTTCTTACTACTCCCTCCATAG 59.164 44.000 0.00 0.00 0.00 2.23
6612 6928 5.599242 GCTTTCTTACTACTCCCTCCATAGT 59.401 44.000 0.00 0.00 33.73 2.12
6614 6930 7.419711 TTTCTTACTACTCCCTCCATAGTTG 57.580 40.000 0.00 0.00 31.65 3.16
6615 6931 4.894114 TCTTACTACTCCCTCCATAGTTGC 59.106 45.833 0.00 0.00 31.65 4.17
6616 6932 3.406512 ACTACTCCCTCCATAGTTGCT 57.593 47.619 0.00 0.00 0.00 3.91
6617 6933 3.301274 ACTACTCCCTCCATAGTTGCTC 58.699 50.000 0.00 0.00 0.00 4.26
6644 6975 9.530633 AGATTTCAATAAGAACTACATACGGAC 57.469 33.333 0.00 0.00 35.56 4.79
7084 7416 2.152699 GTGACCGCAGACGATGACG 61.153 63.158 0.00 0.00 43.93 4.35
7099 7431 0.457166 TGACGACGTTTATGCCTCCG 60.457 55.000 0.13 0.00 0.00 4.63
7339 7671 6.655425 GGCACTCTAAGAAAATTACAGGTCTT 59.345 38.462 0.00 0.00 34.74 3.01
7645 7978 4.476297 TGCCATCTATGATGCCTCAAAAT 58.524 39.130 0.00 0.00 34.37 1.82
7732 8065 1.202698 GGTTGTCTTGTGGCTCACTCT 60.203 52.381 6.83 0.00 35.11 3.24
7834 8167 7.391554 AGTCAACTGATTTATGCAAGCTTTCTA 59.608 33.333 0.00 0.00 0.00 2.10
7837 8170 8.404000 CAACTGATTTATGCAAGCTTTCTAGAT 58.596 33.333 0.00 0.00 0.00 1.98
7969 8302 6.670027 ACATAATTTACTCTGTCAGGGACTCT 59.330 38.462 6.75 0.00 34.60 3.24
7970 8303 5.669164 AATTTACTCTGTCAGGGACTCTC 57.331 43.478 6.75 0.00 34.60 3.20
7971 8304 4.390129 TTTACTCTGTCAGGGACTCTCT 57.610 45.455 6.75 0.00 34.60 3.10
7978 8311 0.193574 TCAGGGACTCTCTGGGGTTT 59.806 55.000 6.07 0.00 34.60 3.27
7990 8323 2.904434 TCTGGGGTTTTCTACCTGTCTC 59.096 50.000 0.00 0.00 46.86 3.36
8009 8342 5.995282 TGTCTCAGTTACTGGGTTAATTGTG 59.005 40.000 12.37 0.00 33.01 3.33
8015 8348 7.038870 TCAGTTACTGGGTTAATTGTGTAGCTA 60.039 37.037 12.79 0.00 31.51 3.32
8033 8366 5.707066 AGCTATTCTGAAAGGATCTTGGT 57.293 39.130 0.00 0.00 31.64 3.67
8067 8400 8.934023 TTTTAGAGGGTCTGTGTTTGAATTAT 57.066 30.769 0.00 0.00 0.00 1.28
8070 8403 5.711976 AGAGGGTCTGTGTTTGAATTATTGG 59.288 40.000 0.00 0.00 0.00 3.16
8072 8405 6.548321 AGGGTCTGTGTTTGAATTATTGGTA 58.452 36.000 0.00 0.00 0.00 3.25
8115 8448 7.584987 ACTTTAGTTCAGTGCAATAACATGAC 58.415 34.615 0.00 0.00 0.00 3.06
8147 8480 4.473477 AAGGGAAGTAACAGATTCGAGG 57.527 45.455 0.00 0.00 0.00 4.63
8185 8518 1.905215 AGACTAGCAAGTGCATGTCCT 59.095 47.619 18.51 8.70 45.16 3.85
8211 8544 7.524717 AACAGATTGCTAATACTTGTTTGGT 57.475 32.000 0.00 0.00 0.00 3.67
8354 8690 5.478233 CAATGCATTTGGATTGTGGATTG 57.522 39.130 9.83 4.82 45.15 2.67
8384 8720 5.559770 TGAGGAAGTTCTGTATTTGCATCA 58.440 37.500 2.25 0.00 0.00 3.07
8398 8734 0.811281 GCATCACCCTGCCAGTTTAC 59.189 55.000 0.00 0.00 36.10 2.01
8399 8735 1.614317 GCATCACCCTGCCAGTTTACT 60.614 52.381 0.00 0.00 36.10 2.24
8400 8736 2.355716 GCATCACCCTGCCAGTTTACTA 60.356 50.000 0.00 0.00 36.10 1.82
8401 8737 3.270877 CATCACCCTGCCAGTTTACTAC 58.729 50.000 0.00 0.00 0.00 2.73
8402 8738 1.626825 TCACCCTGCCAGTTTACTACC 59.373 52.381 0.00 0.00 0.00 3.18
8403 8739 1.349688 CACCCTGCCAGTTTACTACCA 59.650 52.381 0.00 0.00 0.00 3.25
8404 8740 2.026262 CACCCTGCCAGTTTACTACCAT 60.026 50.000 0.00 0.00 0.00 3.55
8464 8803 9.460019 TGTATCAAACTGAATTGGAATACATCA 57.540 29.630 0.00 0.00 30.91 3.07
8471 8810 7.293073 ACTGAATTGGAATACATCATTAGGCT 58.707 34.615 0.00 0.00 0.00 4.58
8477 8816 8.463930 TTGGAATACATCATTAGGCTTTTAGG 57.536 34.615 0.00 0.00 0.00 2.69
8478 8817 7.811282 TGGAATACATCATTAGGCTTTTAGGA 58.189 34.615 0.00 0.00 0.00 2.94
8479 8818 8.278639 TGGAATACATCATTAGGCTTTTAGGAA 58.721 33.333 0.00 0.00 0.00 3.36
8483 8822 9.700831 ATACATCATTAGGCTTTTAGGAAAACT 57.299 29.630 0.00 0.00 0.00 2.66
8484 8823 8.422577 ACATCATTAGGCTTTTAGGAAAACTT 57.577 30.769 0.00 0.00 0.00 2.66
8485 8824 9.528489 ACATCATTAGGCTTTTAGGAAAACTTA 57.472 29.630 0.00 0.00 0.00 2.24
8488 8827 9.802039 TCATTAGGCTTTTAGGAAAACTTAGAA 57.198 29.630 0.00 0.00 0.00 2.10
8522 8861 6.448207 AAAGAATCTAAAGATCAGCAAGCC 57.552 37.500 0.00 0.00 32.75 4.35
8523 8862 4.125703 AGAATCTAAAGATCAGCAAGCCG 58.874 43.478 0.00 0.00 32.75 5.52
8524 8863 3.550437 ATCTAAAGATCAGCAAGCCGT 57.450 42.857 0.00 0.00 0.00 5.68
8525 8864 3.334583 TCTAAAGATCAGCAAGCCGTT 57.665 42.857 0.00 0.00 0.00 4.44
8526 8865 3.002791 TCTAAAGATCAGCAAGCCGTTG 58.997 45.455 0.00 0.00 36.67 4.10
8558 8898 6.982141 TCAGTAGTGTAACCACAAACTAGTTG 59.018 38.462 9.34 6.22 44.39 3.16
8571 8911 6.257849 CACAAACTAGTTGCTCTGTTGAACTA 59.742 38.462 9.34 0.00 41.31 2.24
8578 8918 4.552166 TGCTCTGTTGAACTAAAGTTGC 57.448 40.909 0.00 0.00 38.56 4.17
8634 8974 0.106521 GCCACCCACATGTTTGCTTT 59.893 50.000 0.00 0.00 0.00 3.51
8642 8982 5.104735 ACCCACATGTTTGCTTTCCTTAAAA 60.105 36.000 0.00 0.00 0.00 1.52
8643 8983 5.236263 CCCACATGTTTGCTTTCCTTAAAAC 59.764 40.000 0.00 0.00 33.98 2.43
8646 8986 7.872483 CCACATGTTTGCTTTCCTTAAAACTAT 59.128 33.333 0.00 0.00 34.39 2.12
8647 8987 9.260002 CACATGTTTGCTTTCCTTAAAACTATT 57.740 29.630 0.00 0.00 34.39 1.73
8648 8988 9.476202 ACATGTTTGCTTTCCTTAAAACTATTC 57.524 29.630 0.00 0.00 34.39 1.75
8649 8989 9.696917 CATGTTTGCTTTCCTTAAAACTATTCT 57.303 29.630 0.00 0.00 34.39 2.40
8685 9025 5.877012 AGTCATTAGTACATTTGCCACTCAG 59.123 40.000 0.00 0.00 0.00 3.35
8779 9121 2.435938 GCGGCACATCCTTCGGAA 60.436 61.111 0.00 0.00 34.34 4.30
8806 9148 2.236395 TCAGTTTGCTCTAGGCCTTACC 59.764 50.000 12.58 0.00 40.92 2.85
9089 9432 7.010552 GTCAGTTTGATTCAGTATGTAATCGCT 59.989 37.037 0.00 0.00 36.26 4.93
9116 9459 0.807496 GTGCAGATGGGCTTCACTTC 59.193 55.000 0.00 0.00 37.71 3.01
9161 9504 2.357034 CAAGGGTGGTGTCGACGG 60.357 66.667 11.62 0.00 0.00 4.79
9173 9516 1.001068 TGTCGACGGGAGCACAATAAA 59.999 47.619 11.62 0.00 0.00 1.40
9174 9517 2.070783 GTCGACGGGAGCACAATAAAA 58.929 47.619 0.00 0.00 0.00 1.52
9175 9518 2.481185 GTCGACGGGAGCACAATAAAAA 59.519 45.455 0.00 0.00 0.00 1.94
9176 9519 2.481185 TCGACGGGAGCACAATAAAAAC 59.519 45.455 0.00 0.00 0.00 2.43
9177 9520 2.413634 CGACGGGAGCACAATAAAAACC 60.414 50.000 0.00 0.00 0.00 3.27
9202 9545 0.521735 CAAGGCTTAACCGCAGTTCC 59.478 55.000 0.00 0.00 46.52 3.62
9203 9546 0.953960 AAGGCTTAACCGCAGTTCCG 60.954 55.000 0.00 0.00 46.52 4.30
9204 9547 2.479198 GCTTAACCGCAGTTCCGC 59.521 61.111 0.00 0.00 37.42 5.54
9205 9548 2.322081 GCTTAACCGCAGTTCCGCA 61.322 57.895 0.00 0.00 37.42 5.69
9206 9549 1.787847 CTTAACCGCAGTTCCGCAG 59.212 57.895 0.00 0.00 37.42 5.18
9207 9550 0.949105 CTTAACCGCAGTTCCGCAGT 60.949 55.000 0.00 0.00 37.42 4.40
9208 9551 0.533308 TTAACCGCAGTTCCGCAGTT 60.533 50.000 0.00 0.00 37.42 3.16
9209 9552 0.947180 TAACCGCAGTTCCGCAGTTC 60.947 55.000 0.00 0.00 37.42 3.01
9321 9664 4.386867 TGTCATGGTACGAGGAAAGATC 57.613 45.455 0.00 0.00 0.00 2.75
9337 9680 6.674419 AGGAAAGATCACCAAGTAGATAAGGT 59.326 38.462 0.00 0.00 33.91 3.50
9338 9681 6.987404 GGAAAGATCACCAAGTAGATAAGGTC 59.013 42.308 0.00 0.00 30.44 3.85
9422 9765 4.983671 ACTTGTTTTTCCCTCAGTTGTC 57.016 40.909 0.00 0.00 0.00 3.18
9461 9804 2.874701 GTCATATCATCTGGTGTGTGCC 59.125 50.000 0.00 0.00 0.00 5.01
9493 9838 0.911769 TCGGCCTTCATCATCCAGTT 59.088 50.000 0.00 0.00 0.00 3.16
9498 9845 2.856222 CCTTCATCATCCAGTTAGGCC 58.144 52.381 0.00 0.00 37.29 5.19
9501 9848 0.107456 CATCATCCAGTTAGGCCGCT 59.893 55.000 0.00 0.00 37.29 5.52
9511 9858 0.673644 TTAGGCCGCTCTTCTGTTGC 60.674 55.000 0.00 0.00 0.00 4.17
9539 9891 2.419667 CCAAATGCCTGCTTTTCTTGG 58.580 47.619 0.52 0.00 0.00 3.61
9582 9934 7.718314 TCATGAAGATGATCTTTGGAGTTATGG 59.282 37.037 9.35 0.00 36.73 2.74
9585 9937 5.934781 AGATGATCTTTGGAGTTATGGGTC 58.065 41.667 0.00 0.00 0.00 4.46
9592 9944 5.364446 TCTTTGGAGTTATGGGTCGCTAATA 59.636 40.000 0.00 0.00 0.00 0.98
9593 9945 4.595762 TGGAGTTATGGGTCGCTAATAC 57.404 45.455 0.00 0.00 0.00 1.89
9595 9947 4.280174 TGGAGTTATGGGTCGCTAATACTC 59.720 45.833 0.00 0.00 0.00 2.59
9596 9948 4.321824 GGAGTTATGGGTCGCTAATACTCC 60.322 50.000 0.00 0.00 34.19 3.85
9597 9949 3.577415 AGTTATGGGTCGCTAATACTCCC 59.423 47.826 0.00 0.00 38.68 4.30
9598 9950 2.400467 ATGGGTCGCTAATACTCCCT 57.600 50.000 0.00 0.00 38.95 4.20
9601 9953 0.597072 GGTCGCTAATACTCCCTCCG 59.403 60.000 0.00 0.00 0.00 4.63
9602 9954 1.316651 GTCGCTAATACTCCCTCCGT 58.683 55.000 0.00 0.00 0.00 4.69
9603 9955 1.680207 GTCGCTAATACTCCCTCCGTT 59.320 52.381 0.00 0.00 0.00 4.44
9604 9956 2.100418 GTCGCTAATACTCCCTCCGTTT 59.900 50.000 0.00 0.00 0.00 3.60
9607 9959 3.429822 CGCTAATACTCCCTCCGTTTCAA 60.430 47.826 0.00 0.00 0.00 2.69
9608 9960 4.510571 GCTAATACTCCCTCCGTTTCAAA 58.489 43.478 0.00 0.00 0.00 2.69
9609 9961 4.939439 GCTAATACTCCCTCCGTTTCAAAA 59.061 41.667 0.00 0.00 0.00 2.44
9611 9963 6.764560 GCTAATACTCCCTCCGTTTCAAAATA 59.235 38.462 0.00 0.00 0.00 1.40
9613 9965 9.169592 CTAATACTCCCTCCGTTTCAAAATAAA 57.830 33.333 0.00 0.00 0.00 1.40
9614 9966 8.589701 AATACTCCCTCCGTTTCAAAATAAAT 57.410 30.769 0.00 0.00 0.00 1.40
9615 9967 9.689501 AATACTCCCTCCGTTTCAAAATAAATA 57.310 29.630 0.00 0.00 0.00 1.40
9617 9969 8.589701 ACTCCCTCCGTTTCAAAATAAATATT 57.410 30.769 0.00 0.00 0.00 1.28
9618 9970 9.031537 ACTCCCTCCGTTTCAAAATAAATATTT 57.968 29.630 5.89 5.89 37.49 1.40
9619 9971 9.869757 CTCCCTCCGTTTCAAAATAAATATTTT 57.130 29.630 5.91 5.52 44.27 1.82
9646 9998 9.716531 AGTATTAAGTTAGTACAAAGTTGGGTC 57.283 33.333 15.52 0.00 0.00 4.46
9647 9999 9.492973 GTATTAAGTTAGTACAAAGTTGGGTCA 57.507 33.333 9.92 0.00 0.00 4.02
9649 10001 8.611654 TTAAGTTAGTACAAAGTTGGGTCATC 57.388 34.615 0.00 0.00 0.00 2.92
9650 10002 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
9651 10003 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
9652 10004 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
9653 10005 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
9654 10006 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
9655 10007 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
9656 10008 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
9657 10009 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
9658 10010 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
9659 10011 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
9660 10012 7.235399 ACAAAGTTGGGTCATCTATTTTGGAAT 59.765 33.333 0.00 0.00 0.00 3.01
9661 10013 6.780457 AGTTGGGTCATCTATTTTGGAATG 57.220 37.500 0.00 0.00 0.00 2.67
9662 10014 6.493166 AGTTGGGTCATCTATTTTGGAATGA 58.507 36.000 0.00 0.00 0.00 2.57
9663 10015 6.953520 AGTTGGGTCATCTATTTTGGAATGAA 59.046 34.615 0.00 0.00 0.00 2.57
9664 10016 7.123247 AGTTGGGTCATCTATTTTGGAATGAAG 59.877 37.037 0.00 0.00 0.00 3.02
9665 10017 5.893255 TGGGTCATCTATTTTGGAATGAAGG 59.107 40.000 0.00 0.00 0.00 3.46
9666 10018 5.302823 GGGTCATCTATTTTGGAATGAAGGG 59.697 44.000 0.00 0.00 0.00 3.95
9667 10019 6.129179 GGTCATCTATTTTGGAATGAAGGGA 58.871 40.000 0.00 0.00 0.00 4.20
9668 10020 6.264067 GGTCATCTATTTTGGAATGAAGGGAG 59.736 42.308 0.00 0.00 0.00 4.30
9669 10021 6.830838 GTCATCTATTTTGGAATGAAGGGAGT 59.169 38.462 0.00 0.00 0.00 3.85
9670 10022 7.993183 GTCATCTATTTTGGAATGAAGGGAGTA 59.007 37.037 0.00 0.00 0.00 2.59
9671 10023 8.556589 TCATCTATTTTGGAATGAAGGGAGTAA 58.443 33.333 0.00 0.00 0.00 2.24
9672 10024 8.844244 CATCTATTTTGGAATGAAGGGAGTAAG 58.156 37.037 0.00 0.00 0.00 2.34
9673 10025 7.928873 TCTATTTTGGAATGAAGGGAGTAAGT 58.071 34.615 0.00 0.00 0.00 2.24
9674 10026 8.047310 TCTATTTTGGAATGAAGGGAGTAAGTC 58.953 37.037 0.00 0.00 0.00 3.01
9675 10027 5.576563 TTTGGAATGAAGGGAGTAAGTCA 57.423 39.130 0.00 0.00 0.00 3.41
9676 10028 4.826274 TGGAATGAAGGGAGTAAGTCAG 57.174 45.455 0.00 0.00 0.00 3.51
9677 10029 4.168101 TGGAATGAAGGGAGTAAGTCAGT 58.832 43.478 0.00 0.00 0.00 3.41
9678 10030 4.597507 TGGAATGAAGGGAGTAAGTCAGTT 59.402 41.667 0.00 0.00 0.00 3.16
9679 10031 5.073144 TGGAATGAAGGGAGTAAGTCAGTTT 59.927 40.000 0.00 0.00 0.00 2.66
9680 10032 6.271391 TGGAATGAAGGGAGTAAGTCAGTTTA 59.729 38.462 0.00 0.00 0.00 2.01
9681 10033 6.594547 GGAATGAAGGGAGTAAGTCAGTTTAC 59.405 42.308 0.00 0.00 34.48 2.01
9682 10034 6.681729 ATGAAGGGAGTAAGTCAGTTTACA 57.318 37.500 0.00 0.00 36.27 2.41
9683 10035 6.488769 TGAAGGGAGTAAGTCAGTTTACAA 57.511 37.500 0.00 0.00 36.27 2.41
9684 10036 7.074653 TGAAGGGAGTAAGTCAGTTTACAAT 57.925 36.000 0.00 0.00 36.27 2.71
9685 10037 6.934645 TGAAGGGAGTAAGTCAGTTTACAATG 59.065 38.462 0.00 0.00 36.27 2.82
9686 10038 5.805728 AGGGAGTAAGTCAGTTTACAATGG 58.194 41.667 0.00 0.00 36.27 3.16
9687 10039 5.546499 AGGGAGTAAGTCAGTTTACAATGGA 59.454 40.000 0.00 0.00 36.27 3.41
9688 10040 6.215636 AGGGAGTAAGTCAGTTTACAATGGAT 59.784 38.462 0.00 0.00 36.27 3.41
9689 10041 6.316390 GGGAGTAAGTCAGTTTACAATGGATG 59.684 42.308 0.00 0.00 36.27 3.51
9690 10042 6.316390 GGAGTAAGTCAGTTTACAATGGATGG 59.684 42.308 0.00 0.00 36.27 3.51
9691 10043 5.648092 AGTAAGTCAGTTTACAATGGATGGC 59.352 40.000 0.00 0.00 36.27 4.40
9692 10044 4.032960 AGTCAGTTTACAATGGATGGCA 57.967 40.909 0.00 0.00 0.00 4.92
9693 10045 4.012374 AGTCAGTTTACAATGGATGGCAG 58.988 43.478 0.00 0.00 0.00 4.85
9694 10046 2.754552 TCAGTTTACAATGGATGGCAGC 59.245 45.455 0.00 0.00 0.00 5.25
9695 10047 1.745087 AGTTTACAATGGATGGCAGCG 59.255 47.619 0.00 0.00 0.00 5.18
9696 10048 0.455410 TTTACAATGGATGGCAGCGC 59.545 50.000 0.00 0.00 0.00 5.92
9697 10049 0.679321 TTACAATGGATGGCAGCGCA 60.679 50.000 11.47 0.00 0.00 6.09
9698 10050 1.375853 TACAATGGATGGCAGCGCAC 61.376 55.000 11.47 0.00 0.00 5.34
9699 10051 2.361483 AATGGATGGCAGCGCACA 60.361 55.556 11.47 5.96 0.00 4.57
9703 10055 2.406401 GATGGCAGCGCACATGAC 59.594 61.111 11.47 0.88 0.00 3.06
9715 10067 1.467543 GCACATGACTTCTGCATGCAG 60.468 52.381 36.80 36.80 45.32 4.41
9716 10068 1.810755 CACATGACTTCTGCATGCAGT 59.189 47.619 39.08 26.07 45.32 4.40
9717 10069 3.004862 CACATGACTTCTGCATGCAGTA 58.995 45.455 39.08 31.48 45.32 2.74
9718 10070 3.005554 ACATGACTTCTGCATGCAGTAC 58.994 45.455 39.08 28.17 45.32 2.73
9719 10071 3.268330 CATGACTTCTGCATGCAGTACT 58.732 45.455 39.08 25.11 43.96 2.73
9720 10072 2.964740 TGACTTCTGCATGCAGTACTC 58.035 47.619 39.08 29.96 43.96 2.59
9721 10073 2.564504 TGACTTCTGCATGCAGTACTCT 59.435 45.455 39.08 21.99 43.96 3.24
9722 10074 3.763897 TGACTTCTGCATGCAGTACTCTA 59.236 43.478 39.08 21.70 43.96 2.43
9723 10075 4.220602 TGACTTCTGCATGCAGTACTCTAA 59.779 41.667 39.08 26.33 43.96 2.10
9724 10076 5.105187 TGACTTCTGCATGCAGTACTCTAAT 60.105 40.000 39.08 20.84 43.96 1.73
9725 10077 5.738909 ACTTCTGCATGCAGTACTCTAATT 58.261 37.500 39.08 20.68 43.96 1.40
9726 10078 6.176183 ACTTCTGCATGCAGTACTCTAATTT 58.824 36.000 39.08 16.87 43.96 1.82
9727 10079 7.331026 ACTTCTGCATGCAGTACTCTAATTTA 58.669 34.615 39.08 18.45 43.96 1.40
9728 10080 7.278868 ACTTCTGCATGCAGTACTCTAATTTAC 59.721 37.037 39.08 0.00 43.96 2.01
9729 10081 6.639563 TCTGCATGCAGTACTCTAATTTACA 58.360 36.000 39.08 17.84 43.96 2.41
9730 10082 7.102993 TCTGCATGCAGTACTCTAATTTACAA 58.897 34.615 39.08 17.23 43.96 2.41
9731 10083 7.770433 TCTGCATGCAGTACTCTAATTTACAAT 59.230 33.333 39.08 0.00 43.96 2.71
9732 10084 7.696755 TGCATGCAGTACTCTAATTTACAATG 58.303 34.615 18.46 0.00 0.00 2.82
9733 10085 7.336679 TGCATGCAGTACTCTAATTTACAATGT 59.663 33.333 18.46 0.00 0.00 2.71
9734 10086 8.826710 GCATGCAGTACTCTAATTTACAATGTA 58.173 33.333 14.21 0.00 0.00 2.29
9737 10089 9.325198 TGCAGTACTCTAATTTACAATGTATGG 57.675 33.333 0.00 0.00 0.00 2.74
9738 10090 8.283291 GCAGTACTCTAATTTACAATGTATGGC 58.717 37.037 0.00 0.00 0.00 4.40
9739 10091 9.325198 CAGTACTCTAATTTACAATGTATGGCA 57.675 33.333 0.00 0.00 0.00 4.92
9740 10092 9.547753 AGTACTCTAATTTACAATGTATGGCAG 57.452 33.333 0.00 0.00 0.00 4.85
9741 10093 7.264373 ACTCTAATTTACAATGTATGGCAGC 57.736 36.000 0.00 0.00 0.00 5.25
9742 10094 6.017934 ACTCTAATTTACAATGTATGGCAGCG 60.018 38.462 0.00 0.00 0.00 5.18
9743 10095 2.842208 TTTACAATGTATGGCAGCGC 57.158 45.000 0.00 0.00 0.00 5.92
9744 10096 1.743996 TTACAATGTATGGCAGCGCA 58.256 45.000 11.47 0.00 0.00 6.09
9745 10097 1.013596 TACAATGTATGGCAGCGCAC 58.986 50.000 11.47 0.00 0.00 5.34
9746 10098 0.959867 ACAATGTATGGCAGCGCACA 60.960 50.000 11.47 3.88 0.00 4.57
9747 10099 0.382873 CAATGTATGGCAGCGCACAT 59.617 50.000 11.47 13.71 33.12 3.21
9748 10100 0.382873 AATGTATGGCAGCGCACATG 59.617 50.000 11.47 0.00 32.15 3.21
9749 10101 0.464193 ATGTATGGCAGCGCACATGA 60.464 50.000 11.47 3.21 30.64 3.07
9750 10102 0.464193 TGTATGGCAGCGCACATGAT 60.464 50.000 11.47 0.00 0.00 2.45
9751 10103 0.664761 GTATGGCAGCGCACATGATT 59.335 50.000 11.47 0.00 0.00 2.57
9752 10104 1.066002 GTATGGCAGCGCACATGATTT 59.934 47.619 11.47 0.00 0.00 2.17
9753 10105 0.101759 ATGGCAGCGCACATGATTTC 59.898 50.000 11.47 0.00 0.00 2.17
9816 10168 6.798482 TCTGTTGCATTTGATTGGATGATAC 58.202 36.000 0.00 0.00 0.00 2.24
9817 10169 5.580661 TGTTGCATTTGATTGGATGATACG 58.419 37.500 0.00 0.00 0.00 3.06
9818 10170 5.356470 TGTTGCATTTGATTGGATGATACGA 59.644 36.000 0.00 0.00 0.00 3.43
9821 10173 4.516698 GCATTTGATTGGATGATACGACCT 59.483 41.667 0.00 0.00 0.00 3.85
9829 10181 2.418746 GGATGATACGACCTGCACTTGT 60.419 50.000 0.00 0.00 0.00 3.16
9840 10192 0.181587 TGCACTTGTCCTTTTCCGGA 59.818 50.000 0.00 0.00 0.00 5.14
9845 10197 2.046604 GTCCTTTTCCGGACGGGG 60.047 66.667 1.83 6.54 43.56 5.73
9846 10198 2.527374 TCCTTTTCCGGACGGGGT 60.527 61.111 1.83 0.00 36.01 4.95
9847 10199 2.359478 CCTTTTCCGGACGGGGTG 60.359 66.667 1.83 0.00 36.01 4.61
9848 10200 2.359478 CTTTTCCGGACGGGGTGG 60.359 66.667 1.83 0.00 36.01 4.61
9849 10201 2.848197 TTTTCCGGACGGGGTGGA 60.848 61.111 1.83 0.00 36.01 4.02
9850 10202 2.193087 CTTTTCCGGACGGGGTGGAT 62.193 60.000 1.83 0.00 36.01 3.41
9851 10203 2.472414 TTTTCCGGACGGGGTGGATG 62.472 60.000 1.83 0.00 36.01 3.51
9878 10230 2.580729 CGGCGTAATTTGACGTGAAA 57.419 45.000 1.83 1.83 44.74 2.69
9914 10267 1.202722 GGACGTTTGTCTCCCTGGAAA 60.203 52.381 0.00 0.00 44.83 3.13
9915 10268 2.567985 GACGTTTGTCTCCCTGGAAAA 58.432 47.619 0.00 0.00 42.08 2.29
9916 10269 2.946990 GACGTTTGTCTCCCTGGAAAAA 59.053 45.455 0.00 0.00 42.08 1.94
9929 10282 6.493166 TCCCTGGAAAAATATGACTTGTGAT 58.507 36.000 0.00 0.00 0.00 3.06
9936 10289 3.541996 ATATGACTTGTGATGCGGACA 57.458 42.857 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 4.106925 GCTCTGTGGCTGGAGGGG 62.107 72.222 0.00 0.00 0.00 4.79
20 21 0.038251 TGCACTTACGGAGCTCTGTG 60.038 55.000 33.81 22.09 36.70 3.66
24 25 3.787458 GCTGCACTTACGGAGCTC 58.213 61.111 4.71 4.71 45.95 4.09
68 69 3.416277 CAACCAACGACTGCATAATTCG 58.584 45.455 0.00 5.82 38.73 3.34
81 82 1.790755 TCGAAGACATCCAACCAACG 58.209 50.000 0.00 0.00 0.00 4.10
157 158 1.079888 CTTTTTCGGCATGGGTGGC 60.080 57.895 0.00 0.00 46.68 5.01
158 159 1.134946 GATCTTTTTCGGCATGGGTGG 59.865 52.381 0.00 0.00 0.00 4.61
159 160 1.134946 GGATCTTTTTCGGCATGGGTG 59.865 52.381 0.00 0.00 0.00 4.61
169 170 0.453390 CCTGCTGCCGGATCTTTTTC 59.547 55.000 5.05 0.00 0.00 2.29
171 172 1.379044 CCCTGCTGCCGGATCTTTT 60.379 57.895 5.05 0.00 0.00 2.27
189 190 2.585153 GGGCTCCTCCTTTCCGAC 59.415 66.667 0.00 0.00 34.39 4.79
228 229 0.906775 AAATGCAATCCAAGCCCAGG 59.093 50.000 0.00 0.00 0.00 4.45
234 235 1.470285 CGCCCAGAAATGCAATCCAAG 60.470 52.381 0.00 0.00 0.00 3.61
262 264 5.866633 GCACATATCCCAACGATTTTGAAAA 59.133 36.000 0.00 0.00 31.92 2.29
275 285 2.857186 ATATGCACGCACATATCCCA 57.143 45.000 0.00 0.00 38.57 4.37
277 287 3.002656 GCCATATATGCACGCACATATCC 59.997 47.826 12.58 0.00 41.30 2.59
289 299 1.003118 TCCGGAACCTGCCATATATGC 59.997 52.381 0.00 3.97 0.00 3.14
290 300 3.074412 GTTCCGGAACCTGCCATATATG 58.926 50.000 33.02 5.68 35.36 1.78
308 318 4.262617 GAACCCAAACCCTAGATCTGTTC 58.737 47.826 5.18 3.37 0.00 3.18
376 386 3.497332 TCGGACAGGAGAAGAGAAGAAA 58.503 45.455 0.00 0.00 0.00 2.52
379 389 3.580731 GTTTCGGACAGGAGAAGAGAAG 58.419 50.000 0.00 0.00 0.00 2.85
380 390 2.030185 CGTTTCGGACAGGAGAAGAGAA 60.030 50.000 0.00 0.00 0.00 2.87
381 391 1.540267 CGTTTCGGACAGGAGAAGAGA 59.460 52.381 0.00 0.00 0.00 3.10
382 392 1.540267 TCGTTTCGGACAGGAGAAGAG 59.460 52.381 0.00 0.00 0.00 2.85
383 393 1.612676 TCGTTTCGGACAGGAGAAGA 58.387 50.000 0.00 0.00 0.00 2.87
384 394 2.656560 ATCGTTTCGGACAGGAGAAG 57.343 50.000 0.00 0.00 0.00 2.85
385 395 4.219070 TCTTTATCGTTTCGGACAGGAGAA 59.781 41.667 0.00 0.00 0.00 2.87
386 396 3.760151 TCTTTATCGTTTCGGACAGGAGA 59.240 43.478 0.00 0.00 0.00 3.71
387 397 4.106029 TCTTTATCGTTTCGGACAGGAG 57.894 45.455 0.00 0.00 0.00 3.69
389 399 7.478520 AAATATCTTTATCGTTTCGGACAGG 57.521 36.000 0.00 0.00 0.00 4.00
393 403 9.991906 AGGATAAAATATCTTTATCGTTTCGGA 57.008 29.630 16.03 0.00 40.49 4.55
395 405 9.530129 GCAGGATAAAATATCTTTATCGTTTCG 57.470 33.333 15.32 10.21 40.49 3.46
430 440 2.073816 CACACTCCCCAAACGACATAC 58.926 52.381 0.00 0.00 0.00 2.39
453 463 2.034305 CCCCTGCGCGTCTATATATACC 59.966 54.545 8.43 0.00 0.00 2.73
480 490 1.071857 GACGATAATGGAACCCCCTCC 59.928 57.143 0.00 0.00 35.38 4.30
523 534 1.202940 GGGGTATGGAGCAGAATTCCC 60.203 57.143 0.65 0.00 33.62 3.97
537 548 1.078115 ACAAAAGGGAACGGGGGTAT 58.922 50.000 0.00 0.00 0.00 2.73
538 549 0.852155 AACAAAAGGGAACGGGGGTA 59.148 50.000 0.00 0.00 0.00 3.69
551 562 4.453136 GGGCAGTATCGTAAGTCAACAAAA 59.547 41.667 0.00 0.00 39.48 2.44
780 808 2.108362 CGGGCTAGGGCTTTACCG 59.892 66.667 0.00 0.00 40.62 4.02
831 859 3.319755 GAAACAACATACGACGGGAAGA 58.680 45.455 0.00 0.00 0.00 2.87
832 860 2.414138 GGAAACAACATACGACGGGAAG 59.586 50.000 0.00 0.00 0.00 3.46
833 861 2.415776 GGAAACAACATACGACGGGAA 58.584 47.619 0.00 0.00 0.00 3.97
889 917 4.101585 TGCAGAATAAGATTCGGACTCCAT 59.898 41.667 3.89 0.00 0.00 3.41
894 922 3.557595 CCACTGCAGAATAAGATTCGGAC 59.442 47.826 23.35 0.00 0.00 4.79
934 962 0.462047 CTGGCCGTAAACCTAGCCTG 60.462 60.000 0.00 0.00 45.94 4.85
944 972 1.377987 GGATGCAACCTGGCCGTAA 60.378 57.895 5.61 0.00 0.00 3.18
968 996 3.721706 CTCCTCACCCACCCAGGC 61.722 72.222 0.00 0.00 35.39 4.85
969 997 2.203998 ACTCCTCACCCACCCAGG 60.204 66.667 0.00 0.00 37.03 4.45
970 998 2.650116 CGACTCCTCACCCACCCAG 61.650 68.421 0.00 0.00 0.00 4.45
971 999 2.603473 CGACTCCTCACCCACCCA 60.603 66.667 0.00 0.00 0.00 4.51
972 1000 3.391382 CCGACTCCTCACCCACCC 61.391 72.222 0.00 0.00 0.00 4.61
993 1021 1.066587 GAGAGAAGACATCCCCGCG 59.933 63.158 0.00 0.00 0.00 6.46
997 1025 0.103937 CGGCTGAGAGAAGACATCCC 59.896 60.000 0.00 0.00 0.00 3.85
1117 1150 3.481112 AGACAAACGAACAACACCAAC 57.519 42.857 0.00 0.00 0.00 3.77
1124 1157 1.259507 GCACGCTAGACAAACGAACAA 59.740 47.619 0.00 0.00 0.00 2.83
1163 1201 0.392193 CCTGCTCAAGCCTACACAGG 60.392 60.000 0.00 0.00 45.77 4.00
1165 1203 0.610174 CTCCTGCTCAAGCCTACACA 59.390 55.000 0.00 0.00 41.18 3.72
1168 1206 1.134848 CAGACTCCTGCTCAAGCCTAC 60.135 57.143 0.00 0.00 41.18 3.18
1175 1213 0.543883 AGAAGCCAGACTCCTGCTCA 60.544 55.000 0.00 0.00 39.07 4.26
1220 1258 2.761767 CCAATTGCCATTGATCACCTCA 59.238 45.455 11.92 0.00 42.35 3.86
1235 1273 1.396653 GCTCCACCTCATCCCAATTG 58.603 55.000 0.00 0.00 0.00 2.32
1375 1413 7.112122 TCAGTCCAGCATTTACAATTCTACAT 58.888 34.615 0.00 0.00 0.00 2.29
1377 1415 6.985188 TCAGTCCAGCATTTACAATTCTAC 57.015 37.500 0.00 0.00 0.00 2.59
1380 1418 7.315142 TCAATTCAGTCCAGCATTTACAATTC 58.685 34.615 0.00 0.00 0.00 2.17
1400 1443 9.471702 AAAGGAACAGATAATCAGTCATCAATT 57.528 29.630 0.00 0.00 0.00 2.32
1401 1444 9.471702 AAAAGGAACAGATAATCAGTCATCAAT 57.528 29.630 0.00 0.00 0.00 2.57
1407 1450 7.604164 TGACAGAAAAGGAACAGATAATCAGTC 59.396 37.037 0.00 0.00 0.00 3.51
1408 1451 7.453393 TGACAGAAAAGGAACAGATAATCAGT 58.547 34.615 0.00 0.00 0.00 3.41
1413 1456 5.003804 GCCTGACAGAAAAGGAACAGATAA 58.996 41.667 3.32 0.00 35.40 1.75
1417 1460 2.575532 TGCCTGACAGAAAAGGAACAG 58.424 47.619 3.32 0.00 35.40 3.16
1431 1474 0.178767 CTTGGACCGATCATGCCTGA 59.821 55.000 0.00 0.00 35.41 3.86
1571 1614 4.632688 GGCAAGAACCTAACGTTATAAGCA 59.367 41.667 8.76 0.00 33.74 3.91
1573 1616 6.537301 TGATGGCAAGAACCTAACGTTATAAG 59.463 38.462 8.76 3.69 33.74 1.73
1581 1624 5.163513 CACAAATGATGGCAAGAACCTAAC 58.836 41.667 0.00 0.00 0.00 2.34
1611 1655 1.414919 TGAGCAGTCCAGTAACGGTTT 59.585 47.619 0.00 0.00 0.00 3.27
1625 1669 3.054878 GCAAAAACCAATCACTGAGCAG 58.945 45.455 0.00 0.00 0.00 4.24
1677 1721 7.148086 GCAGATTTTGTATCACCATACTTGGAA 60.148 37.037 0.00 0.00 46.92 3.53
1815 1859 6.109156 TGTTTCTTTATGTGCTACCTCTGA 57.891 37.500 0.00 0.00 0.00 3.27
1844 1888 3.074538 ACAAAGAGTAAGGGTGCCAAGAT 59.925 43.478 0.00 0.00 0.00 2.40
1900 1951 4.015084 AGCAGTTCAGCAGCAAGAAATAT 58.985 39.130 0.00 0.00 36.85 1.28
1901 1952 3.189910 CAGCAGTTCAGCAGCAAGAAATA 59.810 43.478 0.00 0.00 36.85 1.40
1902 1953 2.030185 CAGCAGTTCAGCAGCAAGAAAT 60.030 45.455 0.00 0.00 36.85 2.17
1903 1954 1.335810 CAGCAGTTCAGCAGCAAGAAA 59.664 47.619 0.00 0.00 36.85 2.52
1904 1955 0.949397 CAGCAGTTCAGCAGCAAGAA 59.051 50.000 0.00 0.00 36.85 2.52
1905 1956 0.107268 TCAGCAGTTCAGCAGCAAGA 59.893 50.000 0.00 0.00 36.85 3.02
1906 1957 1.135660 CATCAGCAGTTCAGCAGCAAG 60.136 52.381 0.00 0.00 36.85 4.01
1915 1966 7.601856 AGATCTATAACTAGCATCAGCAGTTC 58.398 38.462 0.00 0.00 45.49 3.01
1921 1972 8.836413 GCCTAGTAGATCTATAACTAGCATCAG 58.164 40.741 19.52 10.68 40.80 2.90
1943 1994 8.740123 TTATTGGATTAAAGAATGTTCGCCTA 57.260 30.769 0.00 0.00 0.00 3.93
1978 2029 5.420104 AGCTTTACAAAGGATGAAATGAGGG 59.580 40.000 4.01 0.00 36.53 4.30
1987 2059 3.420893 TGGGTCAGCTTTACAAAGGATG 58.579 45.455 4.01 0.00 36.53 3.51
2000 2072 6.318900 AGCTTATAACATTTTACTGGGTCAGC 59.681 38.462 0.00 0.00 34.37 4.26
2077 2149 6.923508 CAGGTCAAATTTTCCTAACCAAGAAC 59.076 38.462 10.28 0.00 0.00 3.01
2079 2151 5.538433 CCAGGTCAAATTTTCCTAACCAAGA 59.462 40.000 10.28 0.00 0.00 3.02
2120 2192 1.419762 TGAACAGCAGCCCTCACTTAA 59.580 47.619 0.00 0.00 0.00 1.85
2146 2218 9.260002 GAAACCAAGATTTGCATCTTCTTAAAA 57.740 29.630 0.00 0.00 45.26 1.52
2147 2219 8.641541 AGAAACCAAGATTTGCATCTTCTTAAA 58.358 29.630 0.00 0.00 45.26 1.52
2148 2220 8.181904 AGAAACCAAGATTTGCATCTTCTTAA 57.818 30.769 0.00 0.00 45.26 1.85
2149 2221 7.765695 AGAAACCAAGATTTGCATCTTCTTA 57.234 32.000 0.00 0.00 45.26 2.10
2150 2222 6.661304 AGAAACCAAGATTTGCATCTTCTT 57.339 33.333 0.00 0.64 45.26 2.52
2151 2223 6.661304 AAGAAACCAAGATTTGCATCTTCT 57.339 33.333 0.00 0.00 45.26 2.85
2152 2224 8.866956 CATTAAGAAACCAAGATTTGCATCTTC 58.133 33.333 0.00 0.00 45.26 2.87
2154 2226 7.899973 ACATTAAGAAACCAAGATTTGCATCT 58.100 30.769 0.00 0.00 42.05 2.90
2155 2227 8.538409 AACATTAAGAAACCAAGATTTGCATC 57.462 30.769 0.00 0.00 0.00 3.91
2191 2263 5.649395 CCTAATGGTTGAGATGTGTCAATGT 59.351 40.000 0.00 0.00 38.68 2.71
2199 2271 9.920946 AATGTAAATACCTAATGGTTGAGATGT 57.079 29.630 0.00 0.00 46.05 3.06
2245 2317 0.942252 GGACCCACAAAACTCGTCAC 59.058 55.000 0.00 0.00 0.00 3.67
2261 2333 7.681939 TTTTGGACATTTATGACTGTAGGAC 57.318 36.000 0.00 0.00 0.00 3.85
2369 2441 6.405538 CAGGTTAACAAATATTGGTGGCAAT 58.594 36.000 8.10 0.00 34.12 3.56
2373 2445 5.047377 ACTGCAGGTTAACAAATATTGGTGG 60.047 40.000 19.93 0.00 34.12 4.61
2379 2451 5.815581 TGGAGACTGCAGGTTAACAAATAT 58.184 37.500 19.93 0.00 0.00 1.28
2386 2458 4.640771 AGAAATGGAGACTGCAGGTTAA 57.359 40.909 19.93 0.00 0.00 2.01
2433 2505 9.806203 CAAGGAATGAATCTGCAAATATTTGTA 57.194 29.630 25.15 21.01 40.24 2.41
2530 2619 2.322658 ACCCAGAAACGTCAACTAGGA 58.677 47.619 7.70 0.00 0.00 2.94
2542 2631 6.325028 TGTGGATGTGAAATTAAACCCAGAAA 59.675 34.615 0.00 0.00 0.00 2.52
2583 2725 9.300681 CCACATCCAAACATATATGGTAAATCT 57.699 33.333 16.96 0.00 37.94 2.40
2596 2738 3.075882 TCTTTCCCTCCACATCCAAACAT 59.924 43.478 0.00 0.00 0.00 2.71
2605 2747 8.556589 TCTTAATTAATGATCTTTCCCTCCACA 58.443 33.333 0.00 0.00 0.00 4.17
2668 2810 6.492429 ACTCACCATGCTGCAATAATATGATT 59.508 34.615 6.36 0.00 0.00 2.57
2675 2817 5.418524 ACAATAACTCACCATGCTGCAATAA 59.581 36.000 6.36 0.00 0.00 1.40
2679 2821 2.749076 GACAATAACTCACCATGCTGCA 59.251 45.455 4.13 4.13 0.00 4.41
2680 2822 2.749076 TGACAATAACTCACCATGCTGC 59.251 45.455 0.00 0.00 0.00 5.25
2715 2857 0.452987 CACCCAGGTTGATTGCATCG 59.547 55.000 0.00 0.00 0.00 3.84
2723 2865 2.110213 GCGTGACACCCAGGTTGA 59.890 61.111 0.00 0.00 33.44 3.18
2744 2886 1.145945 TCATCTAGGATGGAGCTCGGT 59.854 52.381 7.83 0.00 0.00 4.69
2746 2888 2.234143 TGTCATCTAGGATGGAGCTCG 58.766 52.381 7.83 0.00 0.00 5.03
2759 2901 1.750399 GTGGGGCGCAATGTCATCT 60.750 57.895 10.83 0.00 0.00 2.90
2781 2923 2.236489 ACATGGTTTAGGCCTTGCAT 57.764 45.000 12.58 0.00 37.23 3.96
2800 2942 1.968017 CTGGCGGCAGAGCAAAGAA 60.968 57.895 33.59 0.00 39.27 2.52
2824 2966 3.520317 TCCATCGTGTTAATTACCCCACT 59.480 43.478 7.25 0.00 0.00 4.00
2843 2985 5.512942 TCTTATCCAAACAACATCCTCCA 57.487 39.130 0.00 0.00 0.00 3.86
2912 3054 9.003658 TCCTTCAAAAATAACAAACAAAAGCAA 57.996 25.926 0.00 0.00 0.00 3.91
2915 3057 9.161629 ACCTCCTTCAAAAATAACAAACAAAAG 57.838 29.630 0.00 0.00 0.00 2.27
2994 3136 7.573843 GCCAGTTTAAGCTGCCATATATTACAG 60.574 40.741 13.42 7.20 35.28 2.74
2999 3141 4.728772 TGCCAGTTTAAGCTGCCATATAT 58.271 39.130 13.42 0.00 35.28 0.86
3539 3686 6.854091 TGATCAGAATCTCCAGATGGATAG 57.146 41.667 1.15 0.00 44.46 2.08
3578 3725 1.151450 AGACAACCCAACTGGCCTG 59.849 57.895 8.29 8.29 37.83 4.85
3658 3805 7.124573 AGCATGACAGTATTATCAAGTACCA 57.875 36.000 0.00 0.00 0.00 3.25
3928 4075 7.235193 ACAAGAATGAGATGCTATGGTAGAGAT 59.765 37.037 0.00 0.00 0.00 2.75
3934 4081 3.881688 GCACAAGAATGAGATGCTATGGT 59.118 43.478 0.00 0.00 33.44 3.55
4174 4322 1.267806 CTTAACCAGTGCTGCCTGTTG 59.732 52.381 14.25 5.55 0.00 3.33
4224 4372 2.040278 CAAGGTTCCATCAGGACTCCAA 59.960 50.000 0.00 0.00 45.73 3.53
4313 4462 8.871686 AATAAGCAACACCTTTTAAACAGAAG 57.128 30.769 0.00 0.00 0.00 2.85
4505 4656 6.334989 CACCAACATGTGCATCAATCTAATT 58.665 36.000 0.00 0.00 0.00 1.40
4707 4858 7.282675 TCGAAGGTAAATTGTTTTGTTCCACTA 59.717 33.333 0.00 0.00 0.00 2.74
4731 4882 1.066573 ACAGGAGCTTCATGACCTTCG 60.067 52.381 0.00 0.00 31.79 3.79
4811 4962 3.069872 ACAATCTGGTGCAAATGCTTGAA 59.930 39.130 6.97 0.00 42.66 2.69
4815 4966 4.221262 ACAATACAATCTGGTGCAAATGCT 59.779 37.500 6.97 0.00 42.66 3.79
4881 5033 6.403049 TGAAAAGATGAACTGCGTAATAGGA 58.597 36.000 0.00 0.00 0.00 2.94
5113 5265 1.285950 GCTGGTCCCGCAAGAAAAC 59.714 57.895 0.00 0.00 43.02 2.43
5122 5274 2.124570 CCATCCTTGCTGGTCCCG 60.125 66.667 0.00 0.00 37.07 5.14
5233 5385 2.028287 ACCTATTTCGCGTCGTATCG 57.972 50.000 5.77 0.00 0.00 2.92
5405 5557 8.315482 AGTTAGAACAAGGAAGGAGATTCTTAC 58.685 37.037 0.00 0.00 38.07 2.34
5447 5599 0.031178 GCGGGCTTGCCTGATAATTG 59.969 55.000 23.27 0.24 0.00 2.32
5594 5753 2.163509 ACAGTCTCAGATGCACTACGT 58.836 47.619 0.00 0.00 0.00 3.57
5655 5814 1.215117 CCATGCGTGCGGGAAAAAT 59.785 52.632 0.00 0.00 0.00 1.82
5667 5826 3.431922 AAGAAATGATTGAGCCATGCG 57.568 42.857 0.00 0.00 0.00 4.73
5849 6014 8.739972 AGTTAGTTGGGATCACAATGTAAATTC 58.260 33.333 14.71 0.00 32.24 2.17
5906 6071 1.308069 CCATGCTTCTGTTGTCCCCG 61.308 60.000 0.00 0.00 0.00 5.73
6346 6661 7.944729 ATACAAGTAAAAATGTGAGATGCCT 57.055 32.000 0.00 0.00 0.00 4.75
6431 6747 6.038985 CAGTCTCGAGATCTGCAATTAAGAA 58.961 40.000 19.90 0.00 0.00 2.52
6575 6891 3.978718 AAGAAAGCTGAGAAACTGTGC 57.021 42.857 0.00 0.00 0.00 4.57
6578 6894 6.588373 GGAGTAGTAAGAAAGCTGAGAAACTG 59.412 42.308 0.00 0.00 0.00 3.16
6583 6899 4.936802 AGGGAGTAGTAAGAAAGCTGAGA 58.063 43.478 0.00 0.00 0.00 3.27
6602 6918 3.853355 AATCTGAGCAACTATGGAGGG 57.147 47.619 0.00 0.00 0.00 4.30
6608 6924 9.678260 AGTTCTTATTGAAATCTGAGCAACTAT 57.322 29.630 0.00 0.00 36.30 2.12
6610 6926 7.992754 AGTTCTTATTGAAATCTGAGCAACT 57.007 32.000 0.00 0.00 36.30 3.16
6611 6927 8.721478 TGTAGTTCTTATTGAAATCTGAGCAAC 58.279 33.333 0.00 0.00 36.30 4.17
6612 6928 8.846943 TGTAGTTCTTATTGAAATCTGAGCAA 57.153 30.769 0.00 0.00 36.30 3.91
6616 6932 9.529325 CCGTATGTAGTTCTTATTGAAATCTGA 57.471 33.333 0.00 0.00 36.30 3.27
6617 6933 9.529325 TCCGTATGTAGTTCTTATTGAAATCTG 57.471 33.333 0.00 0.00 36.30 2.90
6684 7015 6.971726 TCCAATACAGACTACATACGGAAT 57.028 37.500 0.00 0.00 0.00 3.01
6719 7050 4.903049 TCCCTCCGTTCCTAAATATAAGCA 59.097 41.667 0.00 0.00 0.00 3.91
7099 7431 1.308783 GGAAAGTAGCTGCTGGTGGC 61.309 60.000 13.43 0.00 42.22 5.01
7339 7671 7.856145 AACATTTAACACATTTGAAAAGGCA 57.144 28.000 0.00 0.00 0.00 4.75
7420 7752 4.092091 GGAACAGAACTTGCTTGATAGACG 59.908 45.833 0.00 0.00 0.00 4.18
7539 7872 1.669760 GATGTTGGACGTTGGGCGA 60.670 57.895 0.00 0.00 44.77 5.54
7645 7978 3.927555 CCTGCTTCACGGGTTCTAA 57.072 52.632 0.00 0.00 40.35 2.10
7708 8041 1.211703 TGAGCCACAAGACAACCTTCA 59.788 47.619 0.00 0.00 31.42 3.02
7732 8065 3.317993 GCCACTGAAAGCAAAGTTAAGGA 59.682 43.478 0.00 0.00 37.60 3.36
7768 8101 1.486310 TGCGTTATTGGAGGAGCAGAT 59.514 47.619 0.00 0.00 0.00 2.90
7837 8170 2.945008 GCTAAATATGCAGACAGTGGCA 59.055 45.455 0.00 0.00 45.23 4.92
7978 8311 4.087182 CCCAGTAACTGAGACAGGTAGAA 58.913 47.826 0.00 0.00 34.05 2.10
7990 8323 5.938125 AGCTACACAATTAACCCAGTAACTG 59.062 40.000 0.00 0.00 0.00 3.16
8009 8342 6.587273 ACCAAGATCCTTTCAGAATAGCTAC 58.413 40.000 0.00 0.00 0.00 3.58
8015 8348 3.766051 GCCAACCAAGATCCTTTCAGAAT 59.234 43.478 0.00 0.00 0.00 2.40
8067 8400 8.121305 AGTAATTGCATGAGAACAAATACCAA 57.879 30.769 0.00 0.00 34.24 3.67
8083 8416 6.384258 TTGCACTGAACTAAAGTAATTGCA 57.616 33.333 0.00 6.64 32.57 4.08
8135 8468 5.655488 CACTTCAGATACCTCGAATCTGTT 58.345 41.667 19.90 7.84 46.84 3.16
8141 8474 2.417379 GCAGCACTTCAGATACCTCGAA 60.417 50.000 0.00 0.00 0.00 3.71
8147 8480 5.004922 AGTCTAAGCAGCACTTCAGATAC 57.995 43.478 0.00 0.00 39.97 2.24
8185 8518 9.073475 ACCAAACAAGTATTAGCAATCTGTTAA 57.927 29.630 0.00 0.00 0.00 2.01
8334 8670 4.468510 AGACAATCCACAATCCAAATGCAT 59.531 37.500 0.00 0.00 0.00 3.96
8354 8690 3.971245 ACAGAACTTCCTCATGGAGAC 57.029 47.619 0.00 0.00 44.24 3.36
8366 8702 4.460382 CAGGGTGATGCAAATACAGAACTT 59.540 41.667 0.00 0.00 0.00 2.66
8384 8720 1.737199 TGGTAGTAAACTGGCAGGGT 58.263 50.000 20.34 8.46 0.00 4.34
8421 8760 5.504853 TGATACATGTAGCAATCCAAACCA 58.495 37.500 20.94 0.00 0.00 3.67
8428 8767 9.229784 CAATTCAGTTTGATACATGTAGCAATC 57.770 33.333 30.88 28.44 40.54 2.67
8430 8769 7.392953 TCCAATTCAGTTTGATACATGTAGCAA 59.607 33.333 27.92 27.92 39.36 3.91
8496 8835 9.277783 GGCTTGCTGATCTTTAGATTCTTTATA 57.722 33.333 0.00 0.00 34.37 0.98
8497 8836 7.041508 CGGCTTGCTGATCTTTAGATTCTTTAT 60.042 37.037 0.00 0.00 34.37 1.40
8498 8837 6.258727 CGGCTTGCTGATCTTTAGATTCTTTA 59.741 38.462 0.00 0.00 34.37 1.85
8499 8838 5.065731 CGGCTTGCTGATCTTTAGATTCTTT 59.934 40.000 0.00 0.00 34.37 2.52
8500 8839 4.574013 CGGCTTGCTGATCTTTAGATTCTT 59.426 41.667 0.00 0.00 34.37 2.52
8502 8841 3.873952 ACGGCTTGCTGATCTTTAGATTC 59.126 43.478 8.57 0.00 34.37 2.52
8506 8845 2.744202 ACAACGGCTTGCTGATCTTTAG 59.256 45.455 8.57 0.00 0.00 1.85
8510 8849 0.957395 CCACAACGGCTTGCTGATCT 60.957 55.000 8.57 0.00 0.00 2.75
8511 8850 1.503542 CCACAACGGCTTGCTGATC 59.496 57.895 8.57 0.00 0.00 2.92
8512 8851 3.672293 CCACAACGGCTTGCTGAT 58.328 55.556 8.57 0.00 0.00 2.90
8521 8860 0.603569 ACTACTGAGAGCCACAACGG 59.396 55.000 0.00 0.00 38.11 4.44
8522 8861 1.000163 ACACTACTGAGAGCCACAACG 60.000 52.381 0.00 0.00 0.00 4.10
8523 8862 2.821991 ACACTACTGAGAGCCACAAC 57.178 50.000 0.00 0.00 0.00 3.32
8524 8863 3.006537 GGTTACACTACTGAGAGCCACAA 59.993 47.826 0.00 0.00 0.00 3.33
8525 8864 2.561419 GGTTACACTACTGAGAGCCACA 59.439 50.000 0.00 0.00 0.00 4.17
8526 8865 2.561419 TGGTTACACTACTGAGAGCCAC 59.439 50.000 0.00 0.00 0.00 5.01
8558 8898 4.552166 TGCAACTTTAGTTCAACAGAGC 57.448 40.909 0.00 0.00 35.83 4.09
8571 8911 6.699575 ATAGAACAGTTCTGTTGCAACTTT 57.300 33.333 28.61 11.02 40.94 2.66
8611 8951 1.603455 AAACATGTGGGTGGCGAGG 60.603 57.895 0.00 0.00 0.00 4.63
8612 8952 1.580942 CAAACATGTGGGTGGCGAG 59.419 57.895 0.00 0.00 0.00 5.03
8614 8954 2.049248 GCAAACATGTGGGTGGCG 60.049 61.111 0.00 0.00 0.00 5.69
8647 8987 9.332502 TGTACTAATGACTTGCTTGTTAAAAGA 57.667 29.630 0.00 0.00 0.00 2.52
8651 8991 9.891828 CAAATGTACTAATGACTTGCTTGTTAA 57.108 29.630 0.00 0.00 0.00 2.01
8652 8992 8.020819 GCAAATGTACTAATGACTTGCTTGTTA 58.979 33.333 0.00 0.00 35.85 2.41
8669 9009 4.320494 CCAGTTTCTGAGTGGCAAATGTAC 60.320 45.833 0.00 0.00 41.81 2.90
8685 9025 6.589907 ACTCACAATTCAACAAAACCAGTTTC 59.410 34.615 0.00 0.00 31.45 2.78
8806 9148 1.006086 TGACATAAACGCTGCCATCG 58.994 50.000 0.00 0.00 0.00 3.84
8815 9157 3.425625 CCAACGGTTCCATGACATAAACG 60.426 47.826 6.81 6.81 39.17 3.60
9079 9422 2.420022 GCACAACAAGGAGCGATTACAT 59.580 45.455 0.00 0.00 0.00 2.29
9089 9432 0.895100 GCCCATCTGCACAACAAGGA 60.895 55.000 0.00 0.00 0.00 3.36
9116 9459 2.481952 GCTCTGTGAAGCCAAGTTGTAG 59.518 50.000 1.45 0.00 36.22 2.74
9161 9504 5.119694 TGGTTTTGGTTTTTATTGTGCTCC 58.880 37.500 0.00 0.00 0.00 4.70
9173 9516 3.431068 CGGTTAAGCCTTGGTTTTGGTTT 60.431 43.478 0.00 0.00 34.25 3.27
9174 9517 2.101750 CGGTTAAGCCTTGGTTTTGGTT 59.898 45.455 0.00 0.00 34.25 3.67
9175 9518 1.684450 CGGTTAAGCCTTGGTTTTGGT 59.316 47.619 0.00 0.00 34.25 3.67
9176 9519 1.604438 GCGGTTAAGCCTTGGTTTTGG 60.604 52.381 0.00 0.00 34.25 3.28
9177 9520 1.067821 TGCGGTTAAGCCTTGGTTTTG 59.932 47.619 0.00 0.00 36.02 2.44
9203 9546 2.969443 ATAAGCAACACACGAACTGC 57.031 45.000 0.00 0.00 34.96 4.40
9204 9547 9.797473 CATATAATATAAGCAACACACGAACTG 57.203 33.333 0.00 0.00 0.00 3.16
9205 9548 9.542462 ACATATAATATAAGCAACACACGAACT 57.458 29.630 0.00 0.00 0.00 3.01
9208 9551 8.279800 GCAACATATAATATAAGCAACACACGA 58.720 33.333 0.00 0.00 0.00 4.35
9209 9552 8.282592 AGCAACATATAATATAAGCAACACACG 58.717 33.333 0.00 0.00 0.00 4.49
9321 9664 7.040961 GCTACTAGAGACCTTATCTACTTGGTG 60.041 44.444 0.00 0.00 38.00 4.17
9337 9680 3.876274 CAGCCAAACTGCTACTAGAGA 57.124 47.619 0.00 0.00 40.32 3.10
9411 9754 0.038744 AATGGGCAGACAACTGAGGG 59.961 55.000 0.00 0.00 46.03 4.30
9412 9755 1.171308 CAATGGGCAGACAACTGAGG 58.829 55.000 0.00 0.00 46.03 3.86
9422 9765 3.992643 TGACAAATGAAACAATGGGCAG 58.007 40.909 0.00 0.00 0.00 4.85
9461 9804 2.867109 AGGCCGATATGGAGATTTGG 57.133 50.000 0.00 0.00 42.00 3.28
9493 9838 1.079127 GCAACAGAAGAGCGGCCTA 60.079 57.895 0.00 0.00 0.00 3.93
9501 9848 1.495584 GGCAACGACGCAACAGAAGA 61.496 55.000 0.00 0.00 0.00 2.87
9539 9891 1.783284 TGATCATTCGATGCGCCTAC 58.217 50.000 4.18 0.00 29.66 3.18
9572 9924 4.220724 AGTATTAGCGACCCATAACTCCA 58.779 43.478 0.00 0.00 0.00 3.86
9574 9926 4.321824 GGGAGTATTAGCGACCCATAACTC 60.322 50.000 0.00 0.00 40.20 3.01
9575 9927 3.577415 GGGAGTATTAGCGACCCATAACT 59.423 47.826 0.00 0.00 40.20 2.24
9579 9931 2.249139 GAGGGAGTATTAGCGACCCAT 58.751 52.381 0.00 0.00 42.62 4.00
9580 9932 1.700955 GAGGGAGTATTAGCGACCCA 58.299 55.000 0.00 0.00 42.62 4.51
9582 9934 0.597072 CGGAGGGAGTATTAGCGACC 59.403 60.000 0.00 0.00 0.00 4.79
9585 9937 2.100252 TGAAACGGAGGGAGTATTAGCG 59.900 50.000 0.00 0.00 0.00 4.26
9592 9944 8.589701 AATATTTATTTTGAAACGGAGGGAGT 57.410 30.769 0.00 0.00 0.00 3.85
9593 9945 9.869757 AAAATATTTATTTTGAAACGGAGGGAG 57.130 29.630 0.01 0.00 42.47 4.30
9620 9972 9.716531 GACCCAACTTTGTACTAACTTAATACT 57.283 33.333 0.00 0.00 0.00 2.12
9621 9973 9.492973 TGACCCAACTTTGTACTAACTTAATAC 57.507 33.333 0.00 0.00 0.00 1.89
9623 9975 9.227777 GATGACCCAACTTTGTACTAACTTAAT 57.772 33.333 0.00 0.00 0.00 1.40
9624 9976 8.434392 AGATGACCCAACTTTGTACTAACTTAA 58.566 33.333 0.00 0.00 0.00 1.85
9625 9977 7.970102 AGATGACCCAACTTTGTACTAACTTA 58.030 34.615 0.00 0.00 0.00 2.24
9626 9978 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
9627 9979 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
9628 9980 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
9629 9981 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
9630 9982 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
9631 9983 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
9632 9984 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
9633 9985 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
9634 9986 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
9635 9987 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
9636 9988 7.454380 TCATTCCAAAATAGATGACCCAACTTT 59.546 33.333 0.00 0.00 0.00 2.66
9637 9989 6.953520 TCATTCCAAAATAGATGACCCAACTT 59.046 34.615 0.00 0.00 0.00 2.66
9638 9990 6.493166 TCATTCCAAAATAGATGACCCAACT 58.507 36.000 0.00 0.00 0.00 3.16
9639 9991 6.773976 TCATTCCAAAATAGATGACCCAAC 57.226 37.500 0.00 0.00 0.00 3.77
9640 9992 6.380846 CCTTCATTCCAAAATAGATGACCCAA 59.619 38.462 0.00 0.00 0.00 4.12
9641 9993 5.893255 CCTTCATTCCAAAATAGATGACCCA 59.107 40.000 0.00 0.00 0.00 4.51
9642 9994 5.302823 CCCTTCATTCCAAAATAGATGACCC 59.697 44.000 0.00 0.00 0.00 4.46
9643 9995 6.129179 TCCCTTCATTCCAAAATAGATGACC 58.871 40.000 0.00 0.00 0.00 4.02
9644 9996 6.830838 ACTCCCTTCATTCCAAAATAGATGAC 59.169 38.462 0.00 0.00 0.00 3.06
9645 9997 6.973642 ACTCCCTTCATTCCAAAATAGATGA 58.026 36.000 0.00 0.00 0.00 2.92
9646 9998 8.752005 TTACTCCCTTCATTCCAAAATAGATG 57.248 34.615 0.00 0.00 0.00 2.90
9647 9999 8.560903 ACTTACTCCCTTCATTCCAAAATAGAT 58.439 33.333 0.00 0.00 0.00 1.98
9648 10000 7.928873 ACTTACTCCCTTCATTCCAAAATAGA 58.071 34.615 0.00 0.00 0.00 1.98
9649 10001 7.829211 TGACTTACTCCCTTCATTCCAAAATAG 59.171 37.037 0.00 0.00 0.00 1.73
9650 10002 7.695055 TGACTTACTCCCTTCATTCCAAAATA 58.305 34.615 0.00 0.00 0.00 1.40
9651 10003 6.552008 TGACTTACTCCCTTCATTCCAAAAT 58.448 36.000 0.00 0.00 0.00 1.82
9652 10004 5.947663 TGACTTACTCCCTTCATTCCAAAA 58.052 37.500 0.00 0.00 0.00 2.44
9653 10005 5.073144 ACTGACTTACTCCCTTCATTCCAAA 59.927 40.000 0.00 0.00 0.00 3.28
9654 10006 4.597507 ACTGACTTACTCCCTTCATTCCAA 59.402 41.667 0.00 0.00 0.00 3.53
9655 10007 4.168101 ACTGACTTACTCCCTTCATTCCA 58.832 43.478 0.00 0.00 0.00 3.53
9656 10008 4.828072 ACTGACTTACTCCCTTCATTCC 57.172 45.455 0.00 0.00 0.00 3.01
9657 10009 7.159372 TGTAAACTGACTTACTCCCTTCATTC 58.841 38.462 6.17 0.00 33.67 2.67
9658 10010 7.074653 TGTAAACTGACTTACTCCCTTCATT 57.925 36.000 6.17 0.00 33.67 2.57
9659 10011 6.681729 TGTAAACTGACTTACTCCCTTCAT 57.318 37.500 6.17 0.00 33.67 2.57
9660 10012 6.488769 TTGTAAACTGACTTACTCCCTTCA 57.511 37.500 6.17 0.00 33.67 3.02
9661 10013 6.371825 CCATTGTAAACTGACTTACTCCCTTC 59.628 42.308 6.17 0.00 33.67 3.46
9662 10014 6.043938 TCCATTGTAAACTGACTTACTCCCTT 59.956 38.462 6.17 0.00 33.67 3.95
9663 10015 5.546499 TCCATTGTAAACTGACTTACTCCCT 59.454 40.000 6.17 0.00 33.67 4.20
9664 10016 5.801380 TCCATTGTAAACTGACTTACTCCC 58.199 41.667 6.17 0.00 33.67 4.30
9665 10017 6.316390 CCATCCATTGTAAACTGACTTACTCC 59.684 42.308 6.17 0.00 33.67 3.85
9666 10018 6.183360 GCCATCCATTGTAAACTGACTTACTC 60.183 42.308 6.17 0.00 33.67 2.59
9667 10019 5.648092 GCCATCCATTGTAAACTGACTTACT 59.352 40.000 6.17 0.00 33.67 2.24
9668 10020 5.414454 TGCCATCCATTGTAAACTGACTTAC 59.586 40.000 0.00 0.00 33.22 2.34
9669 10021 5.565509 TGCCATCCATTGTAAACTGACTTA 58.434 37.500 0.00 0.00 0.00 2.24
9670 10022 4.406456 TGCCATCCATTGTAAACTGACTT 58.594 39.130 0.00 0.00 0.00 3.01
9671 10023 4.012374 CTGCCATCCATTGTAAACTGACT 58.988 43.478 0.00 0.00 0.00 3.41
9672 10024 3.428045 GCTGCCATCCATTGTAAACTGAC 60.428 47.826 0.00 0.00 0.00 3.51
9673 10025 2.754552 GCTGCCATCCATTGTAAACTGA 59.245 45.455 0.00 0.00 0.00 3.41
9674 10026 2.478370 CGCTGCCATCCATTGTAAACTG 60.478 50.000 0.00 0.00 0.00 3.16
9675 10027 1.745087 CGCTGCCATCCATTGTAAACT 59.255 47.619 0.00 0.00 0.00 2.66
9676 10028 1.798813 GCGCTGCCATCCATTGTAAAC 60.799 52.381 0.00 0.00 0.00 2.01
9677 10029 0.455410 GCGCTGCCATCCATTGTAAA 59.545 50.000 0.00 0.00 0.00 2.01
9678 10030 0.679321 TGCGCTGCCATCCATTGTAA 60.679 50.000 9.73 0.00 0.00 2.41
9679 10031 1.077858 TGCGCTGCCATCCATTGTA 60.078 52.632 9.73 0.00 0.00 2.41
9680 10032 2.361483 TGCGCTGCCATCCATTGT 60.361 55.556 9.73 0.00 0.00 2.71
9681 10033 2.011741 ATGTGCGCTGCCATCCATTG 62.012 55.000 9.73 0.00 0.00 2.82
9682 10034 1.755395 ATGTGCGCTGCCATCCATT 60.755 52.632 9.73 0.00 0.00 3.16
9683 10035 2.124024 ATGTGCGCTGCCATCCAT 60.124 55.556 9.73 0.00 0.00 3.41
9684 10036 3.135457 CATGTGCGCTGCCATCCA 61.135 61.111 9.73 0.00 0.00 3.41
9685 10037 2.825387 TCATGTGCGCTGCCATCC 60.825 61.111 9.73 0.00 0.00 3.51
9686 10038 1.651240 AAGTCATGTGCGCTGCCATC 61.651 55.000 9.73 0.00 0.00 3.51
9687 10039 1.651240 GAAGTCATGTGCGCTGCCAT 61.651 55.000 9.73 5.40 0.00 4.40
9688 10040 2.281692 AAGTCATGTGCGCTGCCA 60.282 55.556 9.73 2.81 0.00 4.92
9689 10041 2.037136 AGAAGTCATGTGCGCTGCC 61.037 57.895 9.73 0.00 0.00 4.85
9690 10042 1.134075 CAGAAGTCATGTGCGCTGC 59.866 57.895 9.73 1.68 0.00 5.25
9691 10043 1.134075 GCAGAAGTCATGTGCGCTG 59.866 57.895 9.73 0.00 38.68 5.18
9692 10044 3.571119 GCAGAAGTCATGTGCGCT 58.429 55.556 9.73 0.00 38.68 5.92
9696 10048 1.810755 ACTGCATGCAGAAGTCATGTG 59.189 47.619 45.50 22.20 46.30 3.21
9697 10049 2.195741 ACTGCATGCAGAAGTCATGT 57.804 45.000 45.50 24.25 46.30 3.21
9698 10050 3.268330 AGTACTGCATGCAGAAGTCATG 58.732 45.455 45.50 23.60 46.30 3.07
9699 10051 3.197333 AGAGTACTGCATGCAGAAGTCAT 59.803 43.478 45.50 28.24 46.30 3.06
9703 10055 6.674694 AAATTAGAGTACTGCATGCAGAAG 57.325 37.500 45.50 26.43 46.30 2.85
9715 10067 8.283291 GCTGCCATACATTGTAAATTAGAGTAC 58.717 37.037 0.00 0.00 0.00 2.73
9716 10068 7.170828 CGCTGCCATACATTGTAAATTAGAGTA 59.829 37.037 0.00 0.00 0.00 2.59
9717 10069 6.017934 CGCTGCCATACATTGTAAATTAGAGT 60.018 38.462 0.00 0.00 0.00 3.24
9718 10070 6.365839 CGCTGCCATACATTGTAAATTAGAG 58.634 40.000 0.00 0.00 0.00 2.43
9719 10071 5.277779 GCGCTGCCATACATTGTAAATTAGA 60.278 40.000 0.00 0.00 0.00 2.10
9720 10072 4.911610 GCGCTGCCATACATTGTAAATTAG 59.088 41.667 0.00 0.00 0.00 1.73
9721 10073 4.336713 TGCGCTGCCATACATTGTAAATTA 59.663 37.500 9.73 0.00 0.00 1.40
9722 10074 3.130164 TGCGCTGCCATACATTGTAAATT 59.870 39.130 9.73 0.00 0.00 1.82
9723 10075 2.687425 TGCGCTGCCATACATTGTAAAT 59.313 40.909 9.73 0.00 0.00 1.40
9724 10076 2.087646 TGCGCTGCCATACATTGTAAA 58.912 42.857 9.73 0.00 0.00 2.01
9725 10077 1.400142 GTGCGCTGCCATACATTGTAA 59.600 47.619 9.73 0.00 0.00 2.41
9726 10078 1.013596 GTGCGCTGCCATACATTGTA 58.986 50.000 9.73 0.00 0.00 2.41
9727 10079 0.959867 TGTGCGCTGCCATACATTGT 60.960 50.000 9.73 0.00 0.00 2.71
9728 10080 0.382873 ATGTGCGCTGCCATACATTG 59.617 50.000 9.73 0.00 30.05 2.82
9729 10081 0.382873 CATGTGCGCTGCCATACATT 59.617 50.000 9.73 0.00 31.84 2.71
9730 10082 0.464193 TCATGTGCGCTGCCATACAT 60.464 50.000 9.73 5.90 34.31 2.29
9731 10083 0.464193 ATCATGTGCGCTGCCATACA 60.464 50.000 9.73 3.19 0.00 2.29
9732 10084 0.664761 AATCATGTGCGCTGCCATAC 59.335 50.000 9.73 0.00 0.00 2.39
9733 10085 1.334556 GAAATCATGTGCGCTGCCATA 59.665 47.619 9.73 0.00 0.00 2.74
9734 10086 0.101759 GAAATCATGTGCGCTGCCAT 59.898 50.000 9.73 5.40 0.00 4.40
9735 10087 1.242665 TGAAATCATGTGCGCTGCCA 61.243 50.000 9.73 2.81 0.00 4.92
9736 10088 0.799534 GTGAAATCATGTGCGCTGCC 60.800 55.000 9.73 0.00 0.00 4.85
9737 10089 0.109643 TGTGAAATCATGTGCGCTGC 60.110 50.000 9.73 1.68 0.00 5.25
9738 10090 2.159490 TCATGTGAAATCATGTGCGCTG 60.159 45.455 9.73 0.00 43.70 5.18
9739 10091 2.086094 TCATGTGAAATCATGTGCGCT 58.914 42.857 9.73 0.00 43.70 5.92
9740 10092 2.547913 TCATGTGAAATCATGTGCGC 57.452 45.000 0.00 0.00 43.70 6.09
9741 10093 5.337554 AGAAATCATGTGAAATCATGTGCG 58.662 37.500 6.57 0.00 43.70 5.34
9742 10094 6.561614 AGAGAAATCATGTGAAATCATGTGC 58.438 36.000 6.57 0.00 43.70 4.57
9743 10095 8.890718 AGTAGAGAAATCATGTGAAATCATGTG 58.109 33.333 6.57 0.00 43.70 3.21
9744 10096 8.890718 CAGTAGAGAAATCATGTGAAATCATGT 58.109 33.333 6.57 0.00 43.70 3.21
9745 10097 8.890718 ACAGTAGAGAAATCATGTGAAATCATG 58.109 33.333 0.00 0.00 44.36 3.07
9750 10102 9.725019 ACAATACAGTAGAGAAATCATGTGAAA 57.275 29.630 0.00 0.00 0.00 2.69
9751 10103 9.371136 GACAATACAGTAGAGAAATCATGTGAA 57.629 33.333 0.00 0.00 0.00 3.18
9752 10104 7.702348 CGACAATACAGTAGAGAAATCATGTGA 59.298 37.037 0.00 0.00 0.00 3.58
9753 10105 7.043125 CCGACAATACAGTAGAGAAATCATGTG 60.043 40.741 0.00 0.00 0.00 3.21
9806 10158 1.831106 AGTGCAGGTCGTATCATCCAA 59.169 47.619 0.00 0.00 0.00 3.53
9810 10162 2.418746 GGACAAGTGCAGGTCGTATCAT 60.419 50.000 6.92 0.00 34.87 2.45
9816 10168 1.264288 GAAAAGGACAAGTGCAGGTCG 59.736 52.381 6.92 0.00 34.87 4.79
9817 10169 1.609072 GGAAAAGGACAAGTGCAGGTC 59.391 52.381 4.86 4.86 0.00 3.85
9818 10170 1.692411 GGAAAAGGACAAGTGCAGGT 58.308 50.000 0.00 0.00 0.00 4.00
9821 10173 0.181587 TCCGGAAAAGGACAAGTGCA 59.818 50.000 0.00 0.00 34.92 4.57
9829 10181 2.527374 ACCCCGTCCGGAAAAGGA 60.527 61.111 19.90 0.00 38.11 3.36
9860 10212 2.031857 TGGTTTCACGTCAAATTACGCC 60.032 45.455 0.70 0.00 46.71 5.68
9868 10220 2.616376 CAATCTGGTGGTTTCACGTCAA 59.384 45.455 0.00 0.00 44.50 3.18
9878 10230 1.163309 TCCTCCCCAATCTGGTGGT 59.837 57.895 0.00 0.00 37.69 4.16
9914 10267 4.094887 GTGTCCGCATCACAAGTCATATTT 59.905 41.667 0.00 0.00 36.05 1.40
9915 10268 3.623060 GTGTCCGCATCACAAGTCATATT 59.377 43.478 0.00 0.00 36.05 1.28
9916 10269 3.198068 GTGTCCGCATCACAAGTCATAT 58.802 45.455 0.00 0.00 36.05 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.