Multiple sequence alignment - TraesCS4A01G082800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G082800 chr4A 100.000 6675 0 0 1 6675 86306265 86299591 0.000000e+00 12327.0
1 TraesCS4A01G082800 chr4A 89.602 452 47 0 1072 1523 493347090 493346639 5.810000e-160 575.0
2 TraesCS4A01G082800 chr4A 97.368 38 1 0 3103 3140 86303123 86303086 1.550000e-06 65.8
3 TraesCS4A01G082800 chr4A 97.368 38 1 0 3143 3180 86303163 86303126 1.550000e-06 65.8
4 TraesCS4A01G082800 chr4D 95.988 2044 53 10 3643 5685 378751166 378753181 0.000000e+00 3293.0
5 TraesCS4A01G082800 chr4D 91.539 2151 106 36 175 2276 378747959 378750082 0.000000e+00 2894.0
6 TraesCS4A01G082800 chr4D 84.656 756 44 28 2383 3084 378750314 378751051 0.000000e+00 688.0
7 TraesCS4A01G082800 chr4D 85.468 523 47 16 6163 6675 378753651 378754154 9.920000e-143 518.0
8 TraesCS4A01G082800 chr4B 95.479 2057 70 11 3621 5675 465460264 465462299 0.000000e+00 3262.0
9 TraesCS4A01G082800 chr4B 94.045 1528 59 12 769 2276 465457368 465458883 0.000000e+00 2289.0
10 TraesCS4A01G082800 chr4B 86.728 648 50 12 5689 6316 465475579 465476210 0.000000e+00 688.0
11 TraesCS4A01G082800 chr4B 91.148 305 20 4 182 480 465453989 465454292 2.240000e-109 407.0
12 TraesCS4A01G082800 chr4B 92.562 242 10 2 6434 6675 465476859 465477092 2.310000e-89 340.0
13 TraesCS4A01G082800 chr4B 86.544 327 17 11 471 775 465456085 465456406 1.070000e-87 335.0
14 TraesCS4A01G082800 chr4B 92.143 140 9 2 2250 2388 465458892 465459030 5.280000e-46 196.0
15 TraesCS4A01G082800 chr4B 89.565 115 6 3 3396 3510 465460001 465460109 2.510000e-29 141.0
16 TraesCS4A01G082800 chr4B 95.775 71 3 0 6246 6316 465476546 465476616 1.520000e-21 115.0
17 TraesCS4A01G082800 chr4B 96.774 31 1 0 3054 3084 27863782 27863752 1.200000e-02 52.8
18 TraesCS4A01G082800 chr5A 88.951 534 50 4 1078 1611 66002524 66002000 0.000000e+00 651.0
19 TraesCS4A01G082800 chr5A 87.449 247 24 2 1365 1611 66050316 66050077 1.830000e-70 278.0
20 TraesCS4A01G082800 chr5A 91.279 172 14 1 1 171 185580920 185581091 4.020000e-57 233.0
21 TraesCS4A01G082800 chr5A 90.449 178 15 2 1 177 683558840 683559016 4.020000e-57 233.0
22 TraesCS4A01G082800 chr5A 89.888 178 17 1 1 177 681977305 681977128 1.870000e-55 228.0
23 TraesCS4A01G082800 chr5A 89.444 180 18 1 1 179 414486680 414486501 6.740000e-55 226.0
24 TraesCS4A01G082800 chr2B 96.000 275 11 0 1127 1401 77484731 77485005 1.320000e-121 448.0
25 TraesCS4A01G082800 chr2B 92.620 271 20 0 1131 1401 607302483 607302213 2.260000e-104 390.0
26 TraesCS4A01G082800 chr2B 94.583 240 10 2 1127 1363 749205864 749206103 1.060000e-97 368.0
27 TraesCS4A01G082800 chr2B 98.361 61 1 0 1551 1611 77485036 77485096 2.550000e-19 108.0
28 TraesCS4A01G082800 chr3D 97.899 238 4 1 1127 1363 136563870 136564107 1.730000e-110 411.0
29 TraesCS4A01G082800 chr6B 95.000 240 9 2 1127 1363 695474764 695474525 2.270000e-99 374.0
30 TraesCS4A01G082800 chr6B 95.082 61 3 0 1551 1611 494483079 494483019 5.510000e-16 97.1
31 TraesCS4A01G082800 chr7A 91.279 172 14 1 1 171 299032089 299032260 4.020000e-57 233.0
32 TraesCS4A01G082800 chr7A 89.503 181 18 1 1 180 665054001 665054181 1.870000e-55 228.0
33 TraesCS4A01G082800 chr7A 89.444 180 18 1 1 179 369549342 369549521 6.740000e-55 226.0
34 TraesCS4A01G082800 chr2A 90.698 172 15 1 1 171 268948581 268948752 1.870000e-55 228.0
35 TraesCS4A01G082800 chr2D 89.444 180 18 1 1 179 232492564 232492743 6.740000e-55 226.0
36 TraesCS4A01G082800 chrUn 98.361 61 1 0 1551 1611 68202309 68202249 2.550000e-19 108.0
37 TraesCS4A01G082800 chrUn 100.000 28 0 0 3052 3079 129562234 129562261 1.200000e-02 52.8
38 TraesCS4A01G082800 chr1B 84.615 78 8 2 6314 6388 629177599 629177675 2.580000e-09 75.0
39 TraesCS4A01G082800 chr6A 96.875 32 1 0 3053 3084 593836538 593836507 3.000000e-03 54.7
40 TraesCS4A01G082800 chr7D 100.000 28 0 0 3050 3077 485829912 485829939 1.200000e-02 52.8
41 TraesCS4A01G082800 chr7D 100.000 28 0 0 3050 3077 485830025 485830052 1.200000e-02 52.8
42 TraesCS4A01G082800 chr6D 100.000 28 0 0 3052 3079 121810198 121810225 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G082800 chr4A 86299591 86306265 6674 True 4152.866667 12327 98.245333 1 6675 3 chr4A.!!$R2 6674
1 TraesCS4A01G082800 chr4D 378747959 378754154 6195 False 1848.250000 3293 89.412750 175 6675 4 chr4D.!!$F1 6500
2 TraesCS4A01G082800 chr4B 465453989 465462299 8310 False 1105.000000 3262 91.487333 182 5675 6 chr4B.!!$F1 5493
3 TraesCS4A01G082800 chr4B 465475579 465477092 1513 False 381.000000 688 91.688333 5689 6675 3 chr4B.!!$F2 986
4 TraesCS4A01G082800 chr5A 66002000 66002524 524 True 651.000000 651 88.951000 1078 1611 1 chr5A.!!$R1 533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
632 2465 0.036164 ACGCCACTTGTATGCTTCCA 59.964 50.0 0.00 0.00 0.00 3.53 F
644 2477 0.178873 TGCTTCCAGTCCCTAACCCT 60.179 55.0 0.00 0.00 0.00 4.34 F
944 3761 0.179161 CCACCTCAACTACTCGCTCG 60.179 60.0 0.00 0.00 0.00 5.03 F
2447 5511 0.322816 ATGTGCGTCATGCTTTCCCT 60.323 50.0 0.00 0.00 46.63 4.20 F
3088 6245 0.035439 ATGGTTAGGACGGCACCAAG 60.035 55.0 2.63 0.00 43.85 3.61 F
3130 6287 0.181824 TAATTTGGTAGGGCGGCTCC 59.818 55.0 9.56 10.01 0.00 4.70 F
3144 6301 0.475906 GGCTCCTGGGCTATCATGTT 59.524 55.0 7.03 0.00 37.53 2.71 F
4055 7367 0.691078 TAGTCACCATCCTGGAGGCC 60.691 60.0 2.09 0.00 40.96 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2427 5490 0.099436 GGGAAAGCATGACGCACATC 59.901 55.000 0.00 0.00 46.13 3.06 R
2612 5677 2.614481 GGAATAAGCTCGTTCACCACCA 60.614 50.000 11.70 0.00 0.00 4.17 R
2877 6001 0.035630 CTTCAGCCAGTTCCCCTCTG 60.036 60.000 0.00 0.00 0.00 3.35 R
3482 6751 0.039035 TTAGCCACCCACACCCAATC 59.961 55.000 0.00 0.00 0.00 2.67 R
4601 7913 4.025858 TCCAGCACCTGCAGCCTC 62.026 66.667 8.66 0.00 45.16 4.70 R
5436 8748 4.520846 CCAATTCGGTGAGCGCGC 62.521 66.667 26.66 26.66 0.00 6.86 R
5520 8832 2.070039 TTCCTGGCCATCCTACCGG 61.070 63.158 5.51 0.00 0.00 5.28 R
5730 9043 0.773644 AGACATGCCAGGACAGGTTT 59.226 50.000 0.00 0.00 34.14 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.996788 GAGTCGGTTACATAAGAAGGGA 57.003 45.455 0.00 0.00 0.00 4.20
22 23 5.532664 GAGTCGGTTACATAAGAAGGGAT 57.467 43.478 0.00 0.00 0.00 3.85
23 24 5.530712 GAGTCGGTTACATAAGAAGGGATC 58.469 45.833 0.00 0.00 0.00 3.36
24 25 5.209659 AGTCGGTTACATAAGAAGGGATCT 58.790 41.667 0.00 0.00 41.32 2.75
26 27 5.984323 GTCGGTTACATAAGAAGGGATCTTC 59.016 44.000 0.00 0.00 45.42 2.87
27 28 5.659525 TCGGTTACATAAGAAGGGATCTTCA 59.340 40.000 8.56 0.00 45.42 3.02
28 29 6.326583 TCGGTTACATAAGAAGGGATCTTCAT 59.673 38.462 8.56 0.00 45.42 2.57
29 30 6.647067 CGGTTACATAAGAAGGGATCTTCATC 59.353 42.308 8.56 0.00 45.42 2.92
30 31 7.472100 CGGTTACATAAGAAGGGATCTTCATCT 60.472 40.741 8.56 0.00 45.42 2.90
31 32 8.214364 GGTTACATAAGAAGGGATCTTCATCTT 58.786 37.037 8.56 10.26 45.42 2.40
32 33 9.267084 GTTACATAAGAAGGGATCTTCATCTTC 57.733 37.037 8.56 0.00 45.42 2.87
33 34 6.520272 ACATAAGAAGGGATCTTCATCTTCG 58.480 40.000 8.56 6.46 45.42 3.79
34 35 4.414337 AAGAAGGGATCTTCATCTTCGG 57.586 45.455 8.56 0.00 45.42 4.30
35 36 3.777522 AAGAAGGGATCTTCATCTTCGGT 59.222 43.478 8.56 0.00 45.42 4.69
36 37 3.723260 GAAGGGATCTTCATCTTCGGTC 58.277 50.000 0.00 0.00 46.45 4.79
37 38 1.683917 AGGGATCTTCATCTTCGGTCG 59.316 52.381 0.00 0.00 0.00 4.79
38 39 1.492720 GGATCTTCATCTTCGGTCGC 58.507 55.000 0.00 0.00 0.00 5.19
39 40 1.492720 GATCTTCATCTTCGGTCGCC 58.507 55.000 0.00 0.00 0.00 5.54
40 41 0.824109 ATCTTCATCTTCGGTCGCCA 59.176 50.000 0.00 0.00 0.00 5.69
41 42 0.606096 TCTTCATCTTCGGTCGCCAA 59.394 50.000 0.00 0.00 0.00 4.52
42 43 1.002366 CTTCATCTTCGGTCGCCAAG 58.998 55.000 0.00 0.92 0.00 3.61
43 44 0.320374 TTCATCTTCGGTCGCCAAGT 59.680 50.000 0.00 0.00 0.00 3.16
44 45 0.320374 TCATCTTCGGTCGCCAAGTT 59.680 50.000 0.00 0.00 0.00 2.66
45 46 1.156736 CATCTTCGGTCGCCAAGTTT 58.843 50.000 0.00 0.00 0.00 2.66
46 47 1.135972 CATCTTCGGTCGCCAAGTTTG 60.136 52.381 0.00 0.00 0.00 2.93
47 48 1.082104 CTTCGGTCGCCAAGTTTGC 60.082 57.895 0.00 0.00 0.00 3.68
48 49 2.458006 CTTCGGTCGCCAAGTTTGCC 62.458 60.000 0.00 0.00 0.00 4.52
49 50 2.951475 TTCGGTCGCCAAGTTTGCCT 62.951 55.000 0.00 0.00 0.00 4.75
50 51 2.551912 CGGTCGCCAAGTTTGCCTT 61.552 57.895 0.00 0.00 0.00 4.35
51 52 1.285950 GGTCGCCAAGTTTGCCTTC 59.714 57.895 0.00 0.00 0.00 3.46
52 53 1.285950 GTCGCCAAGTTTGCCTTCC 59.714 57.895 0.00 0.00 0.00 3.46
53 54 1.152860 TCGCCAAGTTTGCCTTCCA 60.153 52.632 0.00 0.00 0.00 3.53
54 55 1.007387 CGCCAAGTTTGCCTTCCAC 60.007 57.895 0.00 0.00 0.00 4.02
55 56 1.007387 GCCAAGTTTGCCTTCCACG 60.007 57.895 0.00 0.00 0.00 4.94
56 57 1.007387 CCAAGTTTGCCTTCCACGC 60.007 57.895 0.00 0.00 0.00 5.34
57 58 1.732917 CAAGTTTGCCTTCCACGCA 59.267 52.632 0.00 0.00 0.00 5.24
58 59 0.102120 CAAGTTTGCCTTCCACGCAA 59.898 50.000 0.00 0.00 44.21 4.85
59 60 0.385390 AAGTTTGCCTTCCACGCAAG 59.615 50.000 0.00 0.00 46.24 4.01
60 61 0.465460 AGTTTGCCTTCCACGCAAGA 60.465 50.000 0.00 0.00 46.24 3.02
61 62 0.383949 GTTTGCCTTCCACGCAAGAA 59.616 50.000 0.00 0.00 46.24 2.52
62 63 0.667993 TTTGCCTTCCACGCAAGAAG 59.332 50.000 3.37 3.37 46.24 2.85
65 66 4.800554 CTTCCACGCAAGAAGGGT 57.199 55.556 2.57 0.00 45.35 4.34
66 67 2.544726 CTTCCACGCAAGAAGGGTC 58.455 57.895 2.57 0.00 42.14 4.46
67 68 0.955919 CTTCCACGCAAGAAGGGTCC 60.956 60.000 2.57 0.00 42.14 4.46
68 69 1.701031 TTCCACGCAAGAAGGGTCCA 61.701 55.000 0.00 0.00 42.14 4.02
69 70 1.228124 CCACGCAAGAAGGGTCCAA 60.228 57.895 0.00 0.00 42.14 3.53
70 71 0.609131 CCACGCAAGAAGGGTCCAAT 60.609 55.000 0.00 0.00 42.14 3.16
71 72 0.804989 CACGCAAGAAGGGTCCAATC 59.195 55.000 0.00 0.00 42.14 2.67
72 73 0.322546 ACGCAAGAAGGGTCCAATCC 60.323 55.000 0.00 0.00 39.51 3.01
73 74 1.369091 CGCAAGAAGGGTCCAATCCG 61.369 60.000 0.00 0.00 43.02 4.18
74 75 1.032114 GCAAGAAGGGTCCAATCCGG 61.032 60.000 0.00 0.00 0.00 5.14
75 76 0.618458 CAAGAAGGGTCCAATCCGGA 59.382 55.000 6.61 6.61 43.61 5.14
84 85 2.684001 TCCAATCCGGACACATGTAC 57.316 50.000 6.12 0.00 39.64 2.90
85 86 1.903183 TCCAATCCGGACACATGTACA 59.097 47.619 6.12 0.00 39.64 2.90
86 87 2.093711 TCCAATCCGGACACATGTACAG 60.094 50.000 6.12 0.00 39.64 2.74
87 88 2.354704 CCAATCCGGACACATGTACAGT 60.355 50.000 6.12 0.00 36.56 3.55
88 89 2.930040 CAATCCGGACACATGTACAGTC 59.070 50.000 6.12 1.72 0.00 3.51
89 90 1.919240 TCCGGACACATGTACAGTCT 58.081 50.000 0.00 0.00 32.98 3.24
90 91 2.244695 TCCGGACACATGTACAGTCTT 58.755 47.619 0.00 0.00 32.98 3.01
91 92 2.230508 TCCGGACACATGTACAGTCTTC 59.769 50.000 0.00 2.23 32.98 2.87
92 93 2.251040 CGGACACATGTACAGTCTTCG 58.749 52.381 12.88 6.83 32.98 3.79
93 94 2.607187 GGACACATGTACAGTCTTCGG 58.393 52.381 12.88 0.00 32.98 4.30
94 95 1.993370 GACACATGTACAGTCTTCGGC 59.007 52.381 0.00 0.00 0.00 5.54
95 96 1.337823 ACACATGTACAGTCTTCGGCC 60.338 52.381 0.00 0.00 0.00 6.13
96 97 1.066858 CACATGTACAGTCTTCGGCCT 60.067 52.381 0.00 0.00 0.00 5.19
97 98 1.623811 ACATGTACAGTCTTCGGCCTT 59.376 47.619 0.00 0.00 0.00 4.35
98 99 2.038557 ACATGTACAGTCTTCGGCCTTT 59.961 45.455 0.00 0.00 0.00 3.11
99 100 3.259876 ACATGTACAGTCTTCGGCCTTTA 59.740 43.478 0.00 0.00 0.00 1.85
100 101 4.081087 ACATGTACAGTCTTCGGCCTTTAT 60.081 41.667 0.00 0.00 0.00 1.40
101 102 3.857052 TGTACAGTCTTCGGCCTTTATG 58.143 45.455 0.00 0.00 0.00 1.90
102 103 3.259876 TGTACAGTCTTCGGCCTTTATGT 59.740 43.478 0.00 0.63 0.00 2.29
103 104 2.973945 ACAGTCTTCGGCCTTTATGTC 58.026 47.619 0.00 0.00 0.00 3.06
104 105 2.567615 ACAGTCTTCGGCCTTTATGTCT 59.432 45.455 0.00 0.00 0.00 3.41
105 106 3.008049 ACAGTCTTCGGCCTTTATGTCTT 59.992 43.478 0.00 0.00 0.00 3.01
106 107 3.619038 CAGTCTTCGGCCTTTATGTCTTC 59.381 47.826 0.00 0.00 0.00 2.87
107 108 3.260884 AGTCTTCGGCCTTTATGTCTTCA 59.739 43.478 0.00 0.00 0.00 3.02
108 109 3.371285 GTCTTCGGCCTTTATGTCTTCAC 59.629 47.826 0.00 0.00 0.00 3.18
109 110 3.007506 TCTTCGGCCTTTATGTCTTCACA 59.992 43.478 0.00 0.00 36.78 3.58
110 111 2.972625 TCGGCCTTTATGTCTTCACAG 58.027 47.619 0.00 0.00 35.41 3.66
111 112 1.398390 CGGCCTTTATGTCTTCACAGC 59.602 52.381 0.00 0.00 35.41 4.40
112 113 1.745653 GGCCTTTATGTCTTCACAGCC 59.254 52.381 0.00 0.00 35.41 4.85
113 114 1.745653 GCCTTTATGTCTTCACAGCCC 59.254 52.381 0.00 0.00 35.41 5.19
114 115 2.879756 GCCTTTATGTCTTCACAGCCCA 60.880 50.000 0.00 0.00 35.41 5.36
115 116 3.624777 CCTTTATGTCTTCACAGCCCAT 58.375 45.455 0.00 0.00 35.41 4.00
116 117 3.629398 CCTTTATGTCTTCACAGCCCATC 59.371 47.826 0.00 0.00 35.41 3.51
117 118 3.998913 TTATGTCTTCACAGCCCATCA 57.001 42.857 0.00 0.00 35.41 3.07
118 119 2.885135 ATGTCTTCACAGCCCATCAA 57.115 45.000 0.00 0.00 35.41 2.57
119 120 2.885135 TGTCTTCACAGCCCATCAAT 57.115 45.000 0.00 0.00 0.00 2.57
120 121 2.715046 TGTCTTCACAGCCCATCAATC 58.285 47.619 0.00 0.00 0.00 2.67
121 122 2.019984 GTCTTCACAGCCCATCAATCC 58.980 52.381 0.00 0.00 0.00 3.01
122 123 1.019673 CTTCACAGCCCATCAATCCG 58.980 55.000 0.00 0.00 0.00 4.18
123 124 0.394216 TTCACAGCCCATCAATCCGG 60.394 55.000 0.00 0.00 0.00 5.14
124 125 2.124151 ACAGCCCATCAATCCGGC 60.124 61.111 0.00 0.00 43.35 6.13
125 126 2.908940 CAGCCCATCAATCCGGCC 60.909 66.667 0.00 0.00 44.13 6.13
126 127 4.209866 AGCCCATCAATCCGGCCC 62.210 66.667 0.00 0.00 44.13 5.80
127 128 4.521292 GCCCATCAATCCGGCCCA 62.521 66.667 0.00 0.00 36.63 5.36
128 129 2.522503 CCCATCAATCCGGCCCAT 59.477 61.111 0.00 0.00 0.00 4.00
129 130 1.767036 CCCATCAATCCGGCCCATA 59.233 57.895 0.00 0.00 0.00 2.74
130 131 0.112218 CCCATCAATCCGGCCCATAA 59.888 55.000 0.00 0.00 0.00 1.90
131 132 1.480312 CCCATCAATCCGGCCCATAAA 60.480 52.381 0.00 0.00 0.00 1.40
132 133 2.528564 CCATCAATCCGGCCCATAAAT 58.471 47.619 0.00 0.00 0.00 1.40
133 134 3.563261 CCCATCAATCCGGCCCATAAATA 60.563 47.826 0.00 0.00 0.00 1.40
134 135 4.085733 CCATCAATCCGGCCCATAAATAA 58.914 43.478 0.00 0.00 0.00 1.40
135 136 4.082245 CCATCAATCCGGCCCATAAATAAC 60.082 45.833 0.00 0.00 0.00 1.89
136 137 4.171878 TCAATCCGGCCCATAAATAACA 57.828 40.909 0.00 0.00 0.00 2.41
137 138 4.141287 TCAATCCGGCCCATAAATAACAG 58.859 43.478 0.00 0.00 0.00 3.16
138 139 2.649531 TCCGGCCCATAAATAACAGG 57.350 50.000 0.00 0.00 0.00 4.00
139 140 0.958822 CCGGCCCATAAATAACAGGC 59.041 55.000 0.00 0.00 43.09 4.85
142 143 0.958822 GCCCATAAATAACAGGCCGG 59.041 55.000 0.00 0.00 37.66 6.13
143 144 1.477923 GCCCATAAATAACAGGCCGGA 60.478 52.381 10.86 0.00 37.66 5.14
144 145 2.227194 CCCATAAATAACAGGCCGGAC 58.773 52.381 10.86 0.00 0.00 4.79
145 146 1.871039 CCATAAATAACAGGCCGGACG 59.129 52.381 10.86 0.24 0.00 4.79
146 147 1.263217 CATAAATAACAGGCCGGACGC 59.737 52.381 10.86 0.00 0.00 5.19
159 160 3.703127 GACGCCCGAAGACCCCTT 61.703 66.667 0.00 0.00 34.81 3.95
160 161 2.284112 ACGCCCGAAGACCCCTTA 60.284 61.111 0.00 0.00 31.62 2.69
161 162 1.891722 GACGCCCGAAGACCCCTTAA 61.892 60.000 0.00 0.00 31.62 1.85
162 163 1.269703 ACGCCCGAAGACCCCTTAAT 61.270 55.000 0.00 0.00 31.62 1.40
163 164 0.532196 CGCCCGAAGACCCCTTAATC 60.532 60.000 0.00 0.00 31.62 1.75
164 165 0.179026 GCCCGAAGACCCCTTAATCC 60.179 60.000 0.00 0.00 31.62 3.01
165 166 1.209621 CCCGAAGACCCCTTAATCCA 58.790 55.000 0.00 0.00 31.62 3.41
166 167 1.562475 CCCGAAGACCCCTTAATCCAA 59.438 52.381 0.00 0.00 31.62 3.53
167 168 2.421529 CCCGAAGACCCCTTAATCCAAG 60.422 54.545 0.00 0.00 31.62 3.61
168 169 2.504175 CCGAAGACCCCTTAATCCAAGA 59.496 50.000 0.00 0.00 36.22 3.02
169 170 3.532542 CGAAGACCCCTTAATCCAAGAC 58.467 50.000 0.00 0.00 36.22 3.01
170 171 3.197983 CGAAGACCCCTTAATCCAAGACT 59.802 47.826 0.00 0.00 36.22 3.24
171 172 4.323562 CGAAGACCCCTTAATCCAAGACTT 60.324 45.833 0.00 0.00 36.22 3.01
172 173 5.571285 GAAGACCCCTTAATCCAAGACTTT 58.429 41.667 0.00 0.00 36.22 2.66
173 174 5.180810 AGACCCCTTAATCCAAGACTTTC 57.819 43.478 0.00 0.00 36.22 2.62
174 175 4.852697 AGACCCCTTAATCCAAGACTTTCT 59.147 41.667 0.00 0.00 36.22 2.52
175 176 5.045505 AGACCCCTTAATCCAAGACTTTCTC 60.046 44.000 0.00 0.00 36.22 2.87
176 177 4.601857 ACCCCTTAATCCAAGACTTTCTCA 59.398 41.667 0.00 0.00 36.22 3.27
177 178 4.944317 CCCCTTAATCCAAGACTTTCTCAC 59.056 45.833 0.00 0.00 36.22 3.51
178 179 4.944317 CCCTTAATCCAAGACTTTCTCACC 59.056 45.833 0.00 0.00 36.22 4.02
179 180 4.631813 CCTTAATCCAAGACTTTCTCACCG 59.368 45.833 0.00 0.00 36.22 4.94
180 181 5.477607 TTAATCCAAGACTTTCTCACCGA 57.522 39.130 0.00 0.00 0.00 4.69
190 191 3.321111 ACTTTCTCACCGAGTACATGTGT 59.679 43.478 9.11 0.00 0.00 3.72
194 195 3.319689 TCTCACCGAGTACATGTGTTTCA 59.680 43.478 9.11 0.00 0.00 2.69
219 220 6.356757 GATGAAATCAGGAGTGCTACTTTC 57.643 41.667 9.73 9.73 44.70 2.62
220 224 5.489792 TGAAATCAGGAGTGCTACTTTCT 57.510 39.130 14.84 0.00 0.00 2.52
224 228 6.859112 AATCAGGAGTGCTACTTTCTCTAA 57.141 37.500 0.00 0.00 0.00 2.10
283 287 2.034305 ACTTACGGTCGATATCACTGCC 59.966 50.000 3.12 0.00 0.00 4.85
284 288 1.977056 TACGGTCGATATCACTGCCT 58.023 50.000 3.12 0.00 0.00 4.75
327 332 6.202188 ACATTTTGACTCGTCGTTTTCATACT 59.798 34.615 0.00 0.00 0.00 2.12
379 387 4.624015 CTGGTCGACGCCCTAAAATATAA 58.376 43.478 9.92 0.00 0.00 0.98
383 391 3.322828 TCGACGCCCTAAAATATAAGGCT 59.677 43.478 0.00 0.00 41.60 4.58
422 430 4.774200 AGAACAAGAGAAAATGGGATTGGG 59.226 41.667 0.00 0.00 0.00 4.12
480 2293 5.391310 CGAACCATCAGTTTCTCAATCCTTG 60.391 44.000 0.00 0.00 39.40 3.61
487 2300 5.707298 TCAGTTTCTCAATCCTTGAATCACC 59.293 40.000 0.00 0.00 39.58 4.02
510 2332 4.187694 CTCCATTCTTCTTCTTCTTCCCG 58.812 47.826 0.00 0.00 0.00 5.14
555 2388 1.066430 GCCCACTCGGAGTTGATACAA 60.066 52.381 8.18 0.00 0.00 2.41
595 2428 4.833126 ACGAAGAGAAAAATGTGTGAACG 58.167 39.130 0.00 0.00 0.00 3.95
619 2452 2.782615 GTGGTTATCGCACGCCAC 59.217 61.111 0.00 0.00 43.52 5.01
629 2462 1.875963 GCACGCCACTTGTATGCTT 59.124 52.632 0.00 0.00 33.44 3.91
632 2465 0.036164 ACGCCACTTGTATGCTTCCA 59.964 50.000 0.00 0.00 0.00 3.53
644 2477 0.178873 TGCTTCCAGTCCCTAACCCT 60.179 55.000 0.00 0.00 0.00 4.34
646 2479 2.193993 GCTTCCAGTCCCTAACCCTAA 58.806 52.381 0.00 0.00 0.00 2.69
647 2480 2.093075 GCTTCCAGTCCCTAACCCTAAC 60.093 54.545 0.00 0.00 0.00 2.34
648 2481 2.259014 TCCAGTCCCTAACCCTAACC 57.741 55.000 0.00 0.00 0.00 2.85
649 2482 1.210538 CCAGTCCCTAACCCTAACCC 58.789 60.000 0.00 0.00 0.00 4.11
650 2483 1.556238 CCAGTCCCTAACCCTAACCCA 60.556 57.143 0.00 0.00 0.00 4.51
651 2484 2.271777 CAGTCCCTAACCCTAACCCAA 58.728 52.381 0.00 0.00 0.00 4.12
665 2498 4.489771 CCAACCCCTAGCCAGGCG 62.490 72.222 5.55 0.00 41.08 5.52
732 2571 4.583871 GTTTGTCTTCCCTCACTGATGAT 58.416 43.478 0.00 0.00 33.22 2.45
778 3584 4.557605 CCATGGCGCCGTGAATGC 62.558 66.667 43.10 9.75 35.09 3.56
788 3594 0.392863 CCGTGAATGCCATGTGGAGA 60.393 55.000 2.55 0.00 37.39 3.71
856 3662 4.367023 CGAGTCCCACCGGCGAAA 62.367 66.667 9.30 0.00 0.00 3.46
857 3663 2.741211 GAGTCCCACCGGCGAAAC 60.741 66.667 9.30 0.00 0.00 2.78
858 3664 4.675029 AGTCCCACCGGCGAAACG 62.675 66.667 9.30 0.00 0.00 3.60
859 3665 4.668118 GTCCCACCGGCGAAACGA 62.668 66.667 9.30 0.00 35.47 3.85
860 3666 3.926318 TCCCACCGGCGAAACGAA 61.926 61.111 9.30 0.00 35.47 3.85
940 3757 1.202582 CCTCACCACCTCAACTACTCG 59.797 57.143 0.00 0.00 0.00 4.18
941 3758 0.601558 TCACCACCTCAACTACTCGC 59.398 55.000 0.00 0.00 0.00 5.03
942 3759 0.603569 CACCACCTCAACTACTCGCT 59.396 55.000 0.00 0.00 0.00 4.93
943 3760 0.889306 ACCACCTCAACTACTCGCTC 59.111 55.000 0.00 0.00 0.00 5.03
944 3761 0.179161 CCACCTCAACTACTCGCTCG 60.179 60.000 0.00 0.00 0.00 5.03
964 3781 3.775654 CACTCACTCCCCGCTCCC 61.776 72.222 0.00 0.00 0.00 4.30
996 3815 2.206536 CCTCCGGCCTCCTCTCATC 61.207 68.421 0.00 0.00 0.00 2.92
1011 3830 4.817909 ATCCCCGTCCCTCCCACC 62.818 72.222 0.00 0.00 0.00 4.61
1436 4273 1.192146 TCCGCCTCCTGCACTACTTT 61.192 55.000 0.00 0.00 41.33 2.66
1705 4542 2.320587 GCAAGACCACGGTGCTGAG 61.321 63.158 1.68 0.00 35.36 3.35
1760 4597 1.213013 CTTCGACCACGTCCTCCTG 59.787 63.158 0.00 0.00 40.69 3.86
1877 4714 1.445095 CGGGATCCTGAGCTTCCTG 59.555 63.158 16.28 0.00 0.00 3.86
2055 4892 3.431346 CCGCAAGAAGATCAAGATGGAGA 60.431 47.826 0.00 0.00 43.02 3.71
2058 4895 4.683942 GCAAGAAGATCAAGATGGAGAGCT 60.684 45.833 0.00 0.00 30.69 4.09
2158 4995 4.067896 ACACTTGCAAGACAGGTAATCAG 58.932 43.478 32.50 2.24 36.23 2.90
2243 5080 0.519077 CGGCTTTCTCCTGAAACAGC 59.481 55.000 0.00 0.00 37.27 4.40
2264 5101 3.571571 CAGTGCAGATTTTGTGGTCATG 58.428 45.455 0.00 0.00 0.00 3.07
2271 5108 2.045561 TTTTGTGGTCATGGACGTGT 57.954 45.000 0.00 0.00 32.65 4.49
2324 5196 7.546778 TTCAAAAAGGCAGTTTAAAATGTCC 57.453 32.000 15.98 16.18 0.00 4.02
2427 5490 8.203937 TCCACACTTTATACACCAATTTATCG 57.796 34.615 0.00 0.00 0.00 2.92
2447 5511 0.322816 ATGTGCGTCATGCTTTCCCT 60.323 50.000 0.00 0.00 46.63 4.20
2454 5518 2.519013 GTCATGCTTTCCCTCCACTTT 58.481 47.619 0.00 0.00 0.00 2.66
2455 5519 3.686016 GTCATGCTTTCCCTCCACTTTA 58.314 45.455 0.00 0.00 0.00 1.85
2456 5520 4.273318 GTCATGCTTTCCCTCCACTTTAT 58.727 43.478 0.00 0.00 0.00 1.40
2457 5521 4.336713 GTCATGCTTTCCCTCCACTTTATC 59.663 45.833 0.00 0.00 0.00 1.75
2479 5543 4.012374 CAACCAATAGTGATGCTGGTTCT 58.988 43.478 2.40 0.00 46.79 3.01
2533 5598 3.259902 GAACAGACCTTATCCAACGGAC 58.740 50.000 0.00 0.00 32.98 4.79
2537 5602 2.165845 AGACCTTATCCAACGGACTTCG 59.834 50.000 0.00 0.00 45.88 3.79
2555 5620 3.396260 TCGGTGTTGTTAGCTAGCTTT 57.604 42.857 24.88 1.27 0.00 3.51
2635 5700 1.287425 GGTGAACGAGCTTATTCCCG 58.713 55.000 8.07 0.00 0.00 5.14
2682 5747 6.678568 ATACAAATTCCCCAACAATCAACA 57.321 33.333 0.00 0.00 0.00 3.33
2741 5816 8.821894 GCACACATTTTATTTTCCAACAAAGTA 58.178 29.630 0.00 0.00 0.00 2.24
2761 5836 9.206870 CAAAGTAATAATGCTCCAAAACACATT 57.793 29.630 0.00 0.00 36.70 2.71
2794 5883 2.101249 TGCAAAGTCTTGGCTCCAAAAG 59.899 45.455 13.20 0.00 35.33 2.27
2804 5923 1.889170 GGCTCCAAAAGACCTCCAAAG 59.111 52.381 0.00 0.00 0.00 2.77
2820 5944 5.163416 CCTCCAAAGAAACACATCCAAAAGT 60.163 40.000 0.00 0.00 0.00 2.66
2836 5960 4.207165 CAAAAGTCAAGAACTCCCAAGGA 58.793 43.478 0.00 0.00 37.17 3.36
2849 5973 2.516277 TCCCAAGGAAGGAACAAAGGAA 59.484 45.455 0.00 0.00 0.00 3.36
2853 5977 4.588528 CCAAGGAAGGAACAAAGGAATTCA 59.411 41.667 7.93 0.00 0.00 2.57
2854 5978 5.246883 CCAAGGAAGGAACAAAGGAATTCAT 59.753 40.000 7.93 0.00 0.00 2.57
2860 5984 3.119495 GGAACAAAGGAATTCATCACCCG 60.119 47.826 7.93 0.00 0.00 5.28
2862 5986 3.081804 ACAAAGGAATTCATCACCCGAC 58.918 45.455 7.93 0.00 0.00 4.79
2873 5997 1.153046 CACCCGACCCTTGTGTGTT 60.153 57.895 0.00 0.00 0.00 3.32
2876 6000 0.321298 CCCGACCCTTGTGTGTTAGG 60.321 60.000 0.00 0.00 0.00 2.69
2877 6001 0.953960 CCGACCCTTGTGTGTTAGGC 60.954 60.000 0.00 0.00 0.00 3.93
2878 6002 0.250124 CGACCCTTGTGTGTTAGGCA 60.250 55.000 0.00 0.00 0.00 4.75
2889 6024 0.984230 TGTTAGGCAGAGGGGAACTG 59.016 55.000 0.00 0.00 38.27 3.16
2894 6029 2.596851 GCAGAGGGGAACTGGCTGA 61.597 63.158 0.00 0.00 36.09 4.26
2920 6055 3.134574 TGGAGGTTGTTTAGATTGCGT 57.865 42.857 0.00 0.00 0.00 5.24
2923 6058 3.125316 GGAGGTTGTTTAGATTGCGTCTG 59.875 47.826 1.97 0.00 37.83 3.51
2945 6080 1.322538 CCAGCCCTACCAAACATGGC 61.323 60.000 0.00 0.00 42.48 4.40
2946 6081 1.000359 AGCCCTACCAAACATGGCC 60.000 57.895 0.00 0.00 43.18 5.36
2958 6093 2.179547 CATGGCCGCGCATTAGTGA 61.180 57.895 8.75 0.00 0.00 3.41
2967 6102 2.555199 GCGCATTAGTGACAGAGGAAT 58.445 47.619 0.30 0.00 0.00 3.01
2986 6121 1.814429 TTTCCTCTGTCACCAAGGGA 58.186 50.000 0.00 0.00 0.00 4.20
2990 6125 1.630369 CCTCTGTCACCAAGGGATCAA 59.370 52.381 0.00 0.00 0.00 2.57
2996 6131 1.355381 TCACCAAGGGATCAACAGCAT 59.645 47.619 0.00 0.00 0.00 3.79
3025 6181 5.942826 ACACAAAATTGGTTGTTGTCCAAAT 59.057 32.000 1.55 0.00 46.07 2.32
3084 6241 0.035820 TTGGATGGTTAGGACGGCAC 60.036 55.000 0.00 0.00 0.00 5.01
3085 6242 1.153229 GGATGGTTAGGACGGCACC 60.153 63.158 0.00 0.00 0.00 5.01
3086 6243 1.600107 GATGGTTAGGACGGCACCA 59.400 57.895 0.75 0.75 44.75 4.17
3087 6244 0.035820 GATGGTTAGGACGGCACCAA 60.036 55.000 2.63 0.00 43.85 3.67
3088 6245 0.035439 ATGGTTAGGACGGCACCAAG 60.035 55.000 2.63 0.00 43.85 3.61
3119 6276 7.546260 ACCCCAGGTTAGCCAATAATTTGGT 62.546 44.000 6.61 0.00 43.50 3.67
3120 6277 8.247345 ACCCCAGGTTAGCCAATAATTTGGTA 62.247 42.308 6.61 0.00 43.50 3.25
3121 6278 9.934521 ACCCCAGGTTAGCCAATAATTTGGTAG 62.935 44.444 6.61 0.00 43.50 3.18
3127 6284 1.339929 CCAATAATTTGGTAGGGCGGC 59.660 52.381 0.00 0.00 46.27 6.53
3128 6285 2.306847 CAATAATTTGGTAGGGCGGCT 58.693 47.619 9.56 0.00 0.00 5.52
3129 6286 2.271944 ATAATTTGGTAGGGCGGCTC 57.728 50.000 9.56 0.00 0.00 4.70
3130 6287 0.181824 TAATTTGGTAGGGCGGCTCC 59.818 55.000 9.56 10.01 0.00 4.70
3131 6288 1.571773 AATTTGGTAGGGCGGCTCCT 61.572 55.000 9.56 13.39 40.79 3.69
3132 6289 2.270874 ATTTGGTAGGGCGGCTCCTG 62.271 60.000 17.08 0.00 37.75 3.86
3139 6296 4.321966 GGCGGCTCCTGGGCTATC 62.322 72.222 0.00 0.00 38.46 2.08
3140 6297 3.550431 GCGGCTCCTGGGCTATCA 61.550 66.667 7.03 0.00 38.46 2.15
3141 6298 2.888447 GCGGCTCCTGGGCTATCAT 61.888 63.158 7.03 0.00 38.46 2.45
3142 6299 1.004080 CGGCTCCTGGGCTATCATG 60.004 63.158 7.03 0.00 38.46 3.07
3143 6300 1.762522 CGGCTCCTGGGCTATCATGT 61.763 60.000 7.03 0.00 38.46 3.21
3144 6301 0.475906 GGCTCCTGGGCTATCATGTT 59.524 55.000 7.03 0.00 37.53 2.71
3145 6302 1.699634 GGCTCCTGGGCTATCATGTTA 59.300 52.381 7.03 0.00 37.53 2.41
3146 6303 2.289945 GGCTCCTGGGCTATCATGTTAG 60.290 54.545 6.46 6.46 37.53 2.34
3147 6304 2.873649 GCTCCTGGGCTATCATGTTAGC 60.874 54.545 22.39 22.39 43.16 3.09
3148 6305 2.369860 CTCCTGGGCTATCATGTTAGCA 59.630 50.000 28.39 14.11 45.21 3.49
3149 6306 2.777114 TCCTGGGCTATCATGTTAGCAA 59.223 45.455 28.39 18.54 45.21 3.91
3150 6307 3.201930 TCCTGGGCTATCATGTTAGCAAA 59.798 43.478 28.39 18.27 45.21 3.68
3151 6308 4.141181 TCCTGGGCTATCATGTTAGCAAAT 60.141 41.667 28.39 2.58 45.21 2.32
3152 6309 5.073008 TCCTGGGCTATCATGTTAGCAAATA 59.927 40.000 28.39 14.95 45.21 1.40
3153 6310 5.769662 CCTGGGCTATCATGTTAGCAAATAA 59.230 40.000 28.39 13.22 45.21 1.40
3154 6311 6.435277 CCTGGGCTATCATGTTAGCAAATAAT 59.565 38.462 28.39 0.58 45.21 1.28
3155 6312 7.039504 CCTGGGCTATCATGTTAGCAAATAATT 60.040 37.037 28.39 0.00 45.21 1.40
3156 6313 8.248904 TGGGCTATCATGTTAGCAAATAATTT 57.751 30.769 28.39 0.00 45.21 1.82
3157 6314 8.143193 TGGGCTATCATGTTAGCAAATAATTTG 58.857 33.333 28.39 0.00 45.21 2.32
3158 6315 7.599998 GGGCTATCATGTTAGCAAATAATTTGG 59.400 37.037 28.39 0.00 45.21 3.28
3182 6339 2.797278 CGGCTCCTGGGCTATCGTT 61.797 63.158 7.03 0.00 38.46 3.85
3197 6370 4.494199 GCTATCGTTGAATGTACCAAGCAC 60.494 45.833 0.00 0.00 0.00 4.40
3201 6374 3.994392 CGTTGAATGTACCAAGCACTAGT 59.006 43.478 0.00 0.00 0.00 2.57
3205 6378 5.475719 TGAATGTACCAAGCACTAGTGTAC 58.524 41.667 23.44 16.84 33.96 2.90
3208 6381 3.760151 TGTACCAAGCACTAGTGTACGAT 59.240 43.478 23.44 9.95 35.66 3.73
3215 6388 6.144563 CCAAGCACTAGTGTACGATGAATATG 59.855 42.308 23.44 6.91 0.00 1.78
3221 6394 9.893305 CACTAGTGTACGATGAATATGATTACA 57.107 33.333 15.06 0.00 0.00 2.41
3243 6416 6.573434 ACAAGATAATCAGATAGCACGAACA 58.427 36.000 0.00 0.00 0.00 3.18
3245 6418 7.549134 ACAAGATAATCAGATAGCACGAACAAA 59.451 33.333 0.00 0.00 0.00 2.83
3252 6425 7.841915 TCAGATAGCACGAACAAAAATATCA 57.158 32.000 0.00 0.00 0.00 2.15
3279 6476 5.950023 ACAAATGGAATCCATATCTGAGCT 58.050 37.500 16.10 0.00 44.40 4.09
3284 6481 3.582208 GGAATCCATATCTGAGCTGGAGT 59.418 47.826 14.14 12.16 42.10 3.85
3291 6488 2.586648 TCTGAGCTGGAGTGACTGTA 57.413 50.000 0.00 0.00 0.00 2.74
3298 6495 4.344978 AGCTGGAGTGACTGTATGACTTA 58.655 43.478 0.00 0.00 0.00 2.24
3317 6514 7.656412 TGACTTAGCTCTTATCATAAGCTCTG 58.344 38.462 0.00 0.00 44.89 3.35
3319 6516 8.243961 ACTTAGCTCTTATCATAAGCTCTGAA 57.756 34.615 0.00 0.00 44.89 3.02
3353 6550 1.156645 GGCGATTGCACCTCTAGCTG 61.157 60.000 7.38 0.00 45.35 4.24
3364 6561 1.604185 CCTCTAGCTGCGAGGTTATGC 60.604 57.143 20.17 0.00 42.47 3.14
3411 6680 3.637229 TCGGATTTGCCTTTGGTGTTTAA 59.363 39.130 0.00 0.00 0.00 1.52
3412 6681 3.987220 CGGATTTGCCTTTGGTGTTTAAG 59.013 43.478 0.00 0.00 0.00 1.85
3462 6731 2.224042 TGGATATTGCTGGTGCGAGTAG 60.224 50.000 0.00 0.00 43.34 2.57
3473 6742 4.832248 TGGTGCGAGTAGAAAAAGATGAT 58.168 39.130 0.00 0.00 0.00 2.45
3478 6747 9.209175 GGTGCGAGTAGAAAAAGATGATAATAT 57.791 33.333 0.00 0.00 0.00 1.28
3504 6773 0.844661 TGGGTGTGGGTGGCTAAGAT 60.845 55.000 0.00 0.00 0.00 2.40
3508 6777 3.562609 GGGTGTGGGTGGCTAAGATAAAA 60.563 47.826 0.00 0.00 0.00 1.52
3509 6778 3.442625 GGTGTGGGTGGCTAAGATAAAAC 59.557 47.826 0.00 0.00 0.00 2.43
3510 6779 4.332828 GTGTGGGTGGCTAAGATAAAACT 58.667 43.478 0.00 0.00 0.00 2.66
3511 6780 5.493809 GTGTGGGTGGCTAAGATAAAACTA 58.506 41.667 0.00 0.00 0.00 2.24
3512 6781 6.120220 GTGTGGGTGGCTAAGATAAAACTAT 58.880 40.000 0.00 0.00 0.00 2.12
3514 6783 6.826741 TGTGGGTGGCTAAGATAAAACTATTC 59.173 38.462 0.00 0.00 0.00 1.75
3515 6784 7.054751 GTGGGTGGCTAAGATAAAACTATTCT 58.945 38.462 0.00 0.00 0.00 2.40
3516 6785 8.208903 GTGGGTGGCTAAGATAAAACTATTCTA 58.791 37.037 0.00 0.00 0.00 2.10
3518 6787 9.220767 GGGTGGCTAAGATAAAACTATTCTATG 57.779 37.037 0.00 0.00 0.00 2.23
3527 6796 9.144298 AGATAAAACTATTCTATGACTCCCGAA 57.856 33.333 0.00 0.00 0.00 4.30
3532 6801 5.833667 ACTATTCTATGACTCCCGAATGACA 59.166 40.000 0.00 0.00 0.00 3.58
3533 6802 5.614324 ATTCTATGACTCCCGAATGACAA 57.386 39.130 0.00 0.00 0.00 3.18
3534 6803 5.614324 TTCTATGACTCCCGAATGACAAT 57.386 39.130 0.00 0.00 0.00 2.71
3535 6804 5.614324 TCTATGACTCCCGAATGACAATT 57.386 39.130 0.00 0.00 0.00 2.32
3536 6805 5.359756 TCTATGACTCCCGAATGACAATTG 58.640 41.667 3.24 3.24 0.00 2.32
3537 6806 3.417069 TGACTCCCGAATGACAATTGT 57.583 42.857 11.78 11.78 0.00 2.71
3538 6807 4.545208 TGACTCCCGAATGACAATTGTA 57.455 40.909 11.95 0.61 0.00 2.41
3539 6808 4.503910 TGACTCCCGAATGACAATTGTAG 58.496 43.478 11.95 5.14 0.00 2.74
3540 6809 4.020573 TGACTCCCGAATGACAATTGTAGT 60.021 41.667 11.95 8.56 0.00 2.73
3541 6810 4.253685 ACTCCCGAATGACAATTGTAGTG 58.746 43.478 11.95 0.15 0.00 2.74
3542 6811 4.020573 ACTCCCGAATGACAATTGTAGTGA 60.021 41.667 11.95 1.23 0.00 3.41
3543 6812 4.250464 TCCCGAATGACAATTGTAGTGAC 58.750 43.478 11.95 0.00 0.00 3.67
3544 6813 4.000325 CCCGAATGACAATTGTAGTGACA 59.000 43.478 11.95 5.17 0.00 3.58
3545 6814 4.142902 CCCGAATGACAATTGTAGTGACAC 60.143 45.833 11.95 0.00 34.48 3.67
3546 6815 4.450757 CCGAATGACAATTGTAGTGACACA 59.549 41.667 11.95 3.62 34.48 3.72
3547 6816 5.049749 CCGAATGACAATTGTAGTGACACAA 60.050 40.000 11.95 3.75 42.32 3.33
3552 6821 7.652300 TGACAATTGTAGTGACACAATCTAC 57.348 36.000 11.95 2.22 46.00 2.59
3553 6822 7.213678 TGACAATTGTAGTGACACAATCTACA 58.786 34.615 11.95 4.92 46.00 2.74
3560 6829 6.926826 TGTAGTGACACAATCTACAAAATCGT 59.073 34.615 8.59 0.00 40.28 3.73
3563 6832 6.071463 GTGACACAATCTACAAAATCGTGAC 58.929 40.000 0.00 0.00 0.00 3.67
3564 6833 5.178623 TGACACAATCTACAAAATCGTGACC 59.821 40.000 0.00 0.00 0.00 4.02
3567 6836 6.079763 CACAATCTACAAAATCGTGACCTTG 58.920 40.000 0.00 0.00 0.00 3.61
3568 6837 5.763204 ACAATCTACAAAATCGTGACCTTGT 59.237 36.000 4.43 4.43 36.11 3.16
3569 6838 6.073222 ACAATCTACAAAATCGTGACCTTGTC 60.073 38.462 2.63 0.00 34.08 3.18
3570 6839 4.951254 TCTACAAAATCGTGACCTTGTCA 58.049 39.130 2.63 0.00 40.50 3.58
3571 6840 5.361427 TCTACAAAATCGTGACCTTGTCAA 58.639 37.500 0.00 0.00 44.49 3.18
3572 6841 5.995282 TCTACAAAATCGTGACCTTGTCAAT 59.005 36.000 0.00 0.00 44.49 2.57
3573 6842 5.108385 ACAAAATCGTGACCTTGTCAATC 57.892 39.130 0.00 0.00 44.49 2.67
3575 6844 2.743636 ATCGTGACCTTGTCAATCGT 57.256 45.000 0.00 0.00 44.49 3.73
3578 6847 2.035449 TCGTGACCTTGTCAATCGTTCT 59.965 45.455 0.00 0.00 44.49 3.01
3579 6848 2.155732 CGTGACCTTGTCAATCGTTCTG 59.844 50.000 0.00 0.00 44.49 3.02
3580 6849 2.096218 GTGACCTTGTCAATCGTTCTGC 60.096 50.000 0.00 0.00 44.49 4.26
3581 6850 2.143122 GACCTTGTCAATCGTTCTGCA 58.857 47.619 0.00 0.00 32.09 4.41
3582 6851 1.873591 ACCTTGTCAATCGTTCTGCAC 59.126 47.619 0.00 0.00 0.00 4.57
3583 6852 1.197721 CCTTGTCAATCGTTCTGCACC 59.802 52.381 0.00 0.00 0.00 5.01
3586 6855 1.872952 TGTCAATCGTTCTGCACCTTG 59.127 47.619 0.00 0.00 0.00 3.61
3587 6856 0.874390 TCAATCGTTCTGCACCTTGC 59.126 50.000 0.00 0.00 45.29 4.01
3589 6858 2.076100 CAATCGTTCTGCACCTTGCTA 58.924 47.619 0.00 0.00 45.31 3.49
3590 6859 2.472695 ATCGTTCTGCACCTTGCTAA 57.527 45.000 0.00 0.00 45.31 3.09
3591 6860 2.248280 TCGTTCTGCACCTTGCTAAA 57.752 45.000 0.00 0.00 45.31 1.85
3594 6863 3.682858 TCGTTCTGCACCTTGCTAAATAC 59.317 43.478 0.00 0.00 45.31 1.89
3596 6865 4.868171 CGTTCTGCACCTTGCTAAATACTA 59.132 41.667 0.00 0.00 45.31 1.82
3597 6866 5.220416 CGTTCTGCACCTTGCTAAATACTAC 60.220 44.000 0.00 0.00 45.31 2.73
3598 6867 5.414789 TCTGCACCTTGCTAAATACTACA 57.585 39.130 0.00 0.00 45.31 2.74
3600 6869 5.817296 TCTGCACCTTGCTAAATACTACATG 59.183 40.000 0.00 0.00 45.31 3.21
3601 6870 5.496556 TGCACCTTGCTAAATACTACATGT 58.503 37.500 2.69 2.69 45.31 3.21
3602 6871 6.645306 TGCACCTTGCTAAATACTACATGTA 58.355 36.000 5.25 5.25 45.31 2.29
3603 6872 7.106890 TGCACCTTGCTAAATACTACATGTAA 58.893 34.615 7.06 0.00 45.31 2.41
3612 6881 9.370126 GCTAAATACTACATGTAATTTCTTGCG 57.630 33.333 15.54 1.23 34.45 4.85
3615 6884 8.718102 AATACTACATGTAATTTCTTGCGTCT 57.282 30.769 7.06 0.00 34.45 4.18
3617 6886 6.163476 ACTACATGTAATTTCTTGCGTCTGA 58.837 36.000 7.06 0.00 0.00 3.27
3618 6887 5.536554 ACATGTAATTTCTTGCGTCTGAG 57.463 39.130 0.00 0.00 0.00 3.35
3619 6888 5.237815 ACATGTAATTTCTTGCGTCTGAGA 58.762 37.500 0.00 0.00 0.00 3.27
3737 7049 2.355193 GCCTCTCTTCCTCGCCACT 61.355 63.158 0.00 0.00 0.00 4.00
3805 7117 0.787183 GCACTCGACAAGCTCAAGAC 59.213 55.000 0.00 0.00 0.00 3.01
3949 7261 1.065854 GGAGGACCACAACATCTCCAG 60.066 57.143 0.00 0.00 42.49 3.86
4037 7349 4.360964 CGGTTCGGGCACACGGTA 62.361 66.667 0.00 0.00 0.00 4.02
4041 7353 2.201708 TTCGGGCACACGGTAGTCA 61.202 57.895 0.00 0.00 0.00 3.41
4053 7365 1.123928 GGTAGTCACCATCCTGGAGG 58.876 60.000 1.52 0.91 45.04 4.30
4055 7367 0.691078 TAGTCACCATCCTGGAGGCC 60.691 60.000 2.09 0.00 40.96 5.19
4261 7573 1.006220 TCTCGCTGATGCACAACGT 60.006 52.632 10.38 0.00 38.88 3.99
4734 8046 1.280982 CATCTCGATGGACAACACCG 58.719 55.000 0.00 0.00 35.24 4.94
4796 8108 4.873129 CGGTCGATCCACCTGCGG 62.873 72.222 7.96 0.00 33.77 5.69
5411 8723 2.383527 CGTCAAGGCCTGCTTCGTC 61.384 63.158 5.69 0.00 0.00 4.20
5433 8745 1.153588 GTGCTGCTCTGAGCCTCTC 60.154 63.158 25.61 14.07 41.51 3.20
5434 8746 2.104729 GCTGCTCTGAGCCTCTCG 59.895 66.667 25.61 10.58 41.51 4.04
5435 8747 2.104729 CTGCTCTGAGCCTCTCGC 59.895 66.667 25.61 1.45 41.51 5.03
5436 8748 3.754740 CTGCTCTGAGCCTCTCGCG 62.755 68.421 25.61 0.00 41.51 5.87
5508 8820 3.279434 GGTGCTAAATAAGTCTGGGTGG 58.721 50.000 0.00 0.00 0.00 4.61
5509 8821 3.308188 GGTGCTAAATAAGTCTGGGTGGT 60.308 47.826 0.00 0.00 0.00 4.16
5510 8822 4.080751 GGTGCTAAATAAGTCTGGGTGGTA 60.081 45.833 0.00 0.00 0.00 3.25
5511 8823 4.874396 GTGCTAAATAAGTCTGGGTGGTAC 59.126 45.833 0.00 0.00 0.00 3.34
5512 8824 4.080751 TGCTAAATAAGTCTGGGTGGTACC 60.081 45.833 4.43 4.43 37.60 3.34
5640 8953 5.286438 AGTTTTGGTTTTCTTGTATTCCGC 58.714 37.500 0.00 0.00 0.00 5.54
5685 8998 7.564793 AGAATCAATACTACTGTATGTTGGCA 58.435 34.615 0.00 0.00 39.16 4.92
5687 9000 6.294361 TCAATACTACTGTATGTTGGCAGT 57.706 37.500 0.00 0.00 46.33 4.40
5719 9032 3.181497 ACGGCTGATGTGTATGCATTTTC 60.181 43.478 3.54 0.00 0.00 2.29
5727 9040 8.746922 TGATGTGTATGCATTTTCTTTTCTTC 57.253 30.769 3.54 0.00 0.00 2.87
5751 9064 0.773644 ACCTGTCCTGGCATGTCTTT 59.226 50.000 0.00 0.00 0.00 2.52
5783 9096 1.928868 AAAAGCTAGCACAATGGCCT 58.071 45.000 18.83 0.00 0.00 5.19
5939 9341 5.312120 AGTTAGATGTCCACGTGTTAGAG 57.688 43.478 15.65 0.00 0.00 2.43
5946 9348 4.242475 TGTCCACGTGTTAGAGCAATAAG 58.758 43.478 15.65 0.00 0.00 1.73
5970 9372 8.293699 AGTTAGTTTTGAGATCTTGTGGTTTT 57.706 30.769 0.00 0.00 0.00 2.43
5979 9381 9.739276 TTGAGATCTTGTGGTTTTCAAGTATAT 57.261 29.630 0.00 0.00 41.78 0.86
5987 9389 6.445786 TGTGGTTTTCAAGTATATCCTACCCT 59.554 38.462 0.00 0.00 0.00 4.34
6020 9427 8.594881 TTGAAACAGTTGTTATTGTTGTTGTT 57.405 26.923 0.00 0.00 37.57 2.83
6033 9440 9.817365 TTATTGTTGTTGTTGTTGTTGAAAATG 57.183 25.926 0.00 0.00 0.00 2.32
6036 9443 6.258727 TGTTGTTGTTGTTGTTGAAAATGTGT 59.741 30.769 0.00 0.00 0.00 3.72
6041 9448 7.804614 TGTTGTTGTTGAAAATGTGTAGAAC 57.195 32.000 0.00 0.00 0.00 3.01
6061 9473 5.131142 AGAACTGGTTCCTATCCTACAATGG 59.869 44.000 9.51 0.00 40.33 3.16
6177 9744 2.963101 GGTGGCCTAACTCCTTGTTTTT 59.037 45.455 3.32 0.00 39.89 1.94
6211 9778 1.803334 GTGACAATGCACGGGACTTA 58.197 50.000 0.00 0.00 0.00 2.24
6217 9784 0.034574 ATGCACGGGACTTATGCCAA 60.035 50.000 0.00 0.00 38.63 4.52
6228 9795 4.523083 GACTTATGCCAATGACCCTAACA 58.477 43.478 0.00 0.00 0.00 2.41
6240 9807 3.833650 TGACCCTAACATCCAGTTTACGA 59.166 43.478 0.00 0.00 41.64 3.43
6244 9811 5.012354 ACCCTAACATCCAGTTTACGAAGAA 59.988 40.000 0.00 0.00 41.64 2.52
6250 10222 7.653767 ACATCCAGTTTACGAAGAACTTAAG 57.346 36.000 0.00 0.00 35.26 1.85
6253 10225 5.916883 TCCAGTTTACGAAGAACTTAAGACG 59.083 40.000 10.09 8.90 35.26 4.18
6396 10398 5.067273 AGACAGAGGGAGTATATCACTTCG 58.933 45.833 0.00 0.00 43.76 3.79
6419 10421 5.022021 GGATACGCTTCGAAACAAAGAATG 58.978 41.667 0.00 0.00 0.00 2.67
6424 10432 3.659444 GCTTCGAAACAAAGAATGTCACG 59.341 43.478 0.00 0.00 42.99 4.35
6433 10441 1.882912 AGAATGTCACGCACACACAT 58.117 45.000 0.00 0.00 38.04 3.21
6436 10533 4.002982 AGAATGTCACGCACACACATATT 58.997 39.130 0.00 0.00 38.04 1.28
6491 10588 1.592131 ACGCAACTTCGTAACCGCA 60.592 52.632 0.00 0.00 41.36 5.69
6492 10589 0.947180 ACGCAACTTCGTAACCGCAT 60.947 50.000 0.00 0.00 41.36 4.73
6493 10590 0.518355 CGCAACTTCGTAACCGCATG 60.518 55.000 0.00 0.00 0.00 4.06
6494 10591 0.793104 GCAACTTCGTAACCGCATGC 60.793 55.000 7.91 7.91 0.00 4.06
6495 10592 0.179200 CAACTTCGTAACCGCATGCC 60.179 55.000 13.15 0.00 0.00 4.40
6496 10593 1.303091 AACTTCGTAACCGCATGCCC 61.303 55.000 13.15 0.00 0.00 5.36
6497 10594 2.808958 CTTCGTAACCGCATGCCCG 61.809 63.158 13.15 4.87 0.00 6.13
6548 10645 6.493115 AGATCTCCTCTCAGTGGTATTACATG 59.507 42.308 0.00 0.00 0.00 3.21
6550 10647 6.377080 TCTCCTCTCAGTGGTATTACATGAT 58.623 40.000 0.00 0.00 0.00 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.996788 TCCCTTCTTATGTAACCGACTC 57.003 45.455 0.00 0.00 0.00 3.36
1 2 5.209659 AGATCCCTTCTTATGTAACCGACT 58.790 41.667 0.00 0.00 0.00 4.18
2 3 5.532664 AGATCCCTTCTTATGTAACCGAC 57.467 43.478 0.00 0.00 0.00 4.79
3 4 5.659525 TGAAGATCCCTTCTTATGTAACCGA 59.340 40.000 6.71 0.00 44.88 4.69
7 8 8.144478 CGAAGATGAAGATCCCTTCTTATGTAA 58.856 37.037 11.39 0.00 44.88 2.41
8 9 7.255977 CCGAAGATGAAGATCCCTTCTTATGTA 60.256 40.741 11.39 0.00 44.88 2.29
9 10 6.463614 CCGAAGATGAAGATCCCTTCTTATGT 60.464 42.308 11.39 0.00 44.88 2.29
10 11 5.931146 CCGAAGATGAAGATCCCTTCTTATG 59.069 44.000 11.39 8.60 44.88 1.90
11 12 5.604650 ACCGAAGATGAAGATCCCTTCTTAT 59.395 40.000 11.39 0.00 44.88 1.73
12 13 4.962995 ACCGAAGATGAAGATCCCTTCTTA 59.037 41.667 11.39 0.00 44.88 2.10
14 15 3.379452 ACCGAAGATGAAGATCCCTTCT 58.621 45.455 6.71 0.00 46.84 2.85
15 16 3.723260 GACCGAAGATGAAGATCCCTTC 58.277 50.000 0.00 0.00 46.89 3.46
16 17 2.101582 CGACCGAAGATGAAGATCCCTT 59.898 50.000 0.00 0.00 34.81 3.95
17 18 1.683917 CGACCGAAGATGAAGATCCCT 59.316 52.381 0.00 0.00 0.00 4.20
18 19 1.870167 GCGACCGAAGATGAAGATCCC 60.870 57.143 0.00 0.00 0.00 3.85
19 20 1.492720 GCGACCGAAGATGAAGATCC 58.507 55.000 0.00 0.00 0.00 3.36
20 21 1.202417 TGGCGACCGAAGATGAAGATC 60.202 52.381 0.00 0.00 0.00 2.75
21 22 0.824109 TGGCGACCGAAGATGAAGAT 59.176 50.000 0.00 0.00 0.00 2.40
22 23 0.606096 TTGGCGACCGAAGATGAAGA 59.394 50.000 0.00 0.00 0.00 2.87
23 24 1.002366 CTTGGCGACCGAAGATGAAG 58.998 55.000 0.00 0.00 0.00 3.02
24 25 0.320374 ACTTGGCGACCGAAGATGAA 59.680 50.000 0.00 0.00 0.00 2.57
25 26 0.320374 AACTTGGCGACCGAAGATGA 59.680 50.000 0.00 0.00 0.00 2.92
26 27 1.135972 CAAACTTGGCGACCGAAGATG 60.136 52.381 0.00 0.00 0.00 2.90
27 28 1.156736 CAAACTTGGCGACCGAAGAT 58.843 50.000 0.00 0.00 0.00 2.40
28 29 1.503818 GCAAACTTGGCGACCGAAGA 61.504 55.000 0.00 0.00 0.00 2.87
29 30 1.082104 GCAAACTTGGCGACCGAAG 60.082 57.895 0.00 0.00 0.00 3.79
30 31 2.548295 GGCAAACTTGGCGACCGAA 61.548 57.895 0.00 0.00 43.97 4.30
31 32 2.975799 GGCAAACTTGGCGACCGA 60.976 61.111 0.00 0.00 43.97 4.69
48 49 0.955919 GGACCCTTCTTGCGTGGAAG 60.956 60.000 0.00 0.00 39.65 3.46
49 50 1.072505 GGACCCTTCTTGCGTGGAA 59.927 57.895 0.00 0.00 0.00 3.53
50 51 1.701031 TTGGACCCTTCTTGCGTGGA 61.701 55.000 0.00 0.00 0.00 4.02
51 52 0.609131 ATTGGACCCTTCTTGCGTGG 60.609 55.000 0.00 0.00 0.00 4.94
52 53 0.804989 GATTGGACCCTTCTTGCGTG 59.195 55.000 0.00 0.00 0.00 5.34
53 54 0.322546 GGATTGGACCCTTCTTGCGT 60.323 55.000 0.00 0.00 0.00 5.24
54 55 1.369091 CGGATTGGACCCTTCTTGCG 61.369 60.000 0.00 0.00 0.00 4.85
55 56 1.032114 CCGGATTGGACCCTTCTTGC 61.032 60.000 0.00 0.00 42.00 4.01
56 57 0.618458 TCCGGATTGGACCCTTCTTG 59.382 55.000 0.00 0.00 43.74 3.02
57 58 3.098445 TCCGGATTGGACCCTTCTT 57.902 52.632 0.00 0.00 43.74 2.52
58 59 4.910613 TCCGGATTGGACCCTTCT 57.089 55.556 0.00 0.00 43.74 2.85
66 67 2.279741 CTGTACATGTGTCCGGATTGG 58.720 52.381 7.81 0.00 40.09 3.16
67 68 2.930040 GACTGTACATGTGTCCGGATTG 59.070 50.000 7.81 6.26 0.00 2.67
68 69 2.832129 AGACTGTACATGTGTCCGGATT 59.168 45.455 7.81 0.00 0.00 3.01
69 70 2.457598 AGACTGTACATGTGTCCGGAT 58.542 47.619 7.81 0.00 0.00 4.18
70 71 1.919240 AGACTGTACATGTGTCCGGA 58.081 50.000 9.11 0.00 0.00 5.14
71 72 2.607187 GAAGACTGTACATGTGTCCGG 58.393 52.381 9.11 0.00 0.00 5.14
72 73 2.251040 CGAAGACTGTACATGTGTCCG 58.749 52.381 9.11 4.10 0.00 4.79
73 74 2.607187 CCGAAGACTGTACATGTGTCC 58.393 52.381 9.11 0.00 0.00 4.02
74 75 1.993370 GCCGAAGACTGTACATGTGTC 59.007 52.381 9.11 7.67 0.00 3.67
75 76 1.337823 GGCCGAAGACTGTACATGTGT 60.338 52.381 9.11 0.00 0.00 3.72
76 77 1.066858 AGGCCGAAGACTGTACATGTG 60.067 52.381 9.11 0.00 0.00 3.21
77 78 1.267121 AGGCCGAAGACTGTACATGT 58.733 50.000 2.69 2.69 0.00 3.21
78 79 2.386661 AAGGCCGAAGACTGTACATG 57.613 50.000 0.00 0.00 0.00 3.21
79 80 4.081087 ACATAAAGGCCGAAGACTGTACAT 60.081 41.667 0.00 0.00 0.00 2.29
80 81 3.259876 ACATAAAGGCCGAAGACTGTACA 59.740 43.478 0.00 0.00 0.00 2.90
81 82 3.858247 ACATAAAGGCCGAAGACTGTAC 58.142 45.455 0.00 0.00 0.00 2.90
82 83 3.767673 AGACATAAAGGCCGAAGACTGTA 59.232 43.478 0.00 0.00 0.00 2.74
83 84 2.567615 AGACATAAAGGCCGAAGACTGT 59.432 45.455 0.00 0.00 0.00 3.55
84 85 3.252974 AGACATAAAGGCCGAAGACTG 57.747 47.619 0.00 0.00 0.00 3.51
85 86 3.260884 TGAAGACATAAAGGCCGAAGACT 59.739 43.478 0.00 0.00 0.00 3.24
86 87 3.371285 GTGAAGACATAAAGGCCGAAGAC 59.629 47.826 0.00 0.00 0.00 3.01
87 88 3.007506 TGTGAAGACATAAAGGCCGAAGA 59.992 43.478 0.00 0.00 0.00 2.87
88 89 3.334691 TGTGAAGACATAAAGGCCGAAG 58.665 45.455 0.00 0.00 0.00 3.79
89 90 3.334691 CTGTGAAGACATAAAGGCCGAA 58.665 45.455 0.00 0.00 0.00 4.30
90 91 2.935238 GCTGTGAAGACATAAAGGCCGA 60.935 50.000 0.00 0.00 0.00 5.54
91 92 1.398390 GCTGTGAAGACATAAAGGCCG 59.602 52.381 0.00 0.00 0.00 6.13
92 93 1.745653 GGCTGTGAAGACATAAAGGCC 59.254 52.381 0.00 0.00 0.00 5.19
93 94 1.745653 GGGCTGTGAAGACATAAAGGC 59.254 52.381 0.00 0.00 0.00 4.35
94 95 3.071874 TGGGCTGTGAAGACATAAAGG 57.928 47.619 0.00 0.00 0.00 3.11
95 96 4.264253 TGATGGGCTGTGAAGACATAAAG 58.736 43.478 0.00 0.00 0.00 1.85
96 97 4.299586 TGATGGGCTGTGAAGACATAAA 57.700 40.909 0.00 0.00 0.00 1.40
97 98 3.998913 TGATGGGCTGTGAAGACATAA 57.001 42.857 0.00 0.00 0.00 1.90
98 99 3.998913 TTGATGGGCTGTGAAGACATA 57.001 42.857 0.00 0.00 0.00 2.29
99 100 2.885135 TTGATGGGCTGTGAAGACAT 57.115 45.000 0.00 0.00 0.00 3.06
100 101 2.618816 GGATTGATGGGCTGTGAAGACA 60.619 50.000 0.00 0.00 0.00 3.41
101 102 2.019984 GGATTGATGGGCTGTGAAGAC 58.980 52.381 0.00 0.00 0.00 3.01
102 103 1.407299 CGGATTGATGGGCTGTGAAGA 60.407 52.381 0.00 0.00 0.00 2.87
103 104 1.019673 CGGATTGATGGGCTGTGAAG 58.980 55.000 0.00 0.00 0.00 3.02
104 105 0.394216 CCGGATTGATGGGCTGTGAA 60.394 55.000 0.00 0.00 0.00 3.18
105 106 1.224315 CCGGATTGATGGGCTGTGA 59.776 57.895 0.00 0.00 0.00 3.58
106 107 2.484062 GCCGGATTGATGGGCTGTG 61.484 63.158 5.05 0.00 43.52 3.66
107 108 2.124151 GCCGGATTGATGGGCTGT 60.124 61.111 5.05 0.00 43.52 4.40
108 109 2.908940 GGCCGGATTGATGGGCTG 60.909 66.667 5.05 0.00 46.62 4.85
111 112 0.112218 TTATGGGCCGGATTGATGGG 59.888 55.000 5.05 0.00 0.00 4.00
112 113 1.993956 TTTATGGGCCGGATTGATGG 58.006 50.000 5.05 0.00 0.00 3.51
113 114 4.522405 TGTTATTTATGGGCCGGATTGATG 59.478 41.667 5.05 0.00 0.00 3.07
114 115 4.735369 TGTTATTTATGGGCCGGATTGAT 58.265 39.130 5.05 0.00 0.00 2.57
115 116 4.141287 CTGTTATTTATGGGCCGGATTGA 58.859 43.478 5.05 0.00 0.00 2.57
116 117 3.255642 CCTGTTATTTATGGGCCGGATTG 59.744 47.826 5.05 0.00 0.00 2.67
117 118 3.496331 CCTGTTATTTATGGGCCGGATT 58.504 45.455 5.05 0.00 0.00 3.01
118 119 2.817839 GCCTGTTATTTATGGGCCGGAT 60.818 50.000 5.05 0.00 37.12 4.18
119 120 1.477923 GCCTGTTATTTATGGGCCGGA 60.478 52.381 5.05 0.00 37.12 5.14
120 121 0.958822 GCCTGTTATTTATGGGCCGG 59.041 55.000 0.00 0.00 37.12 6.13
123 124 0.958822 CCGGCCTGTTATTTATGGGC 59.041 55.000 0.00 0.00 41.80 5.36
124 125 2.227194 GTCCGGCCTGTTATTTATGGG 58.773 52.381 0.00 0.00 0.00 4.00
125 126 1.871039 CGTCCGGCCTGTTATTTATGG 59.129 52.381 0.00 0.00 0.00 2.74
126 127 1.263217 GCGTCCGGCCTGTTATTTATG 59.737 52.381 0.00 0.00 34.80 1.90
127 128 1.589803 GCGTCCGGCCTGTTATTTAT 58.410 50.000 0.00 0.00 34.80 1.40
128 129 3.068574 GCGTCCGGCCTGTTATTTA 57.931 52.632 0.00 0.00 34.80 1.40
129 130 3.899395 GCGTCCGGCCTGTTATTT 58.101 55.556 0.00 0.00 34.80 1.40
142 143 1.891722 TTAAGGGGTCTTCGGGCGTC 61.892 60.000 0.00 0.00 34.59 5.19
143 144 1.269703 ATTAAGGGGTCTTCGGGCGT 61.270 55.000 0.00 0.00 34.59 5.68
144 145 0.532196 GATTAAGGGGTCTTCGGGCG 60.532 60.000 0.00 0.00 34.59 6.13
145 146 0.179026 GGATTAAGGGGTCTTCGGGC 60.179 60.000 0.00 0.00 34.59 6.13
146 147 1.209621 TGGATTAAGGGGTCTTCGGG 58.790 55.000 0.00 0.00 34.59 5.14
147 148 2.504175 TCTTGGATTAAGGGGTCTTCGG 59.496 50.000 0.00 0.00 37.01 4.30
148 149 3.197983 AGTCTTGGATTAAGGGGTCTTCG 59.802 47.826 0.00 0.00 37.01 3.79
149 150 4.846168 AGTCTTGGATTAAGGGGTCTTC 57.154 45.455 0.00 0.00 37.01 2.87
150 151 5.313506 AGAAAGTCTTGGATTAAGGGGTCTT 59.686 40.000 0.00 0.00 37.01 3.01
151 152 4.852697 AGAAAGTCTTGGATTAAGGGGTCT 59.147 41.667 0.00 0.00 37.01 3.85
152 153 5.180810 AGAAAGTCTTGGATTAAGGGGTC 57.819 43.478 0.00 0.00 37.01 4.46
153 154 4.601857 TGAGAAAGTCTTGGATTAAGGGGT 59.398 41.667 0.00 0.00 37.01 4.95
154 155 4.944317 GTGAGAAAGTCTTGGATTAAGGGG 59.056 45.833 0.00 0.00 37.01 4.79
155 156 4.944317 GGTGAGAAAGTCTTGGATTAAGGG 59.056 45.833 0.00 0.00 37.01 3.95
156 157 4.631813 CGGTGAGAAAGTCTTGGATTAAGG 59.368 45.833 0.00 0.00 37.01 2.69
157 158 5.479306 TCGGTGAGAAAGTCTTGGATTAAG 58.521 41.667 0.00 0.00 37.76 1.85
158 159 5.011738 ACTCGGTGAGAAAGTCTTGGATTAA 59.988 40.000 0.00 0.00 33.32 1.40
159 160 4.527038 ACTCGGTGAGAAAGTCTTGGATTA 59.473 41.667 0.00 0.00 33.32 1.75
160 161 3.325135 ACTCGGTGAGAAAGTCTTGGATT 59.675 43.478 0.00 0.00 33.32 3.01
161 162 2.900546 ACTCGGTGAGAAAGTCTTGGAT 59.099 45.455 0.00 0.00 33.32 3.41
162 163 2.317040 ACTCGGTGAGAAAGTCTTGGA 58.683 47.619 0.00 0.00 33.32 3.53
163 164 2.821991 ACTCGGTGAGAAAGTCTTGG 57.178 50.000 0.00 0.00 33.32 3.61
164 165 4.238761 TGTACTCGGTGAGAAAGTCTTG 57.761 45.455 0.00 0.00 33.32 3.02
165 166 4.281182 ACATGTACTCGGTGAGAAAGTCTT 59.719 41.667 0.00 0.00 33.32 3.01
166 167 3.827302 ACATGTACTCGGTGAGAAAGTCT 59.173 43.478 0.00 0.00 33.32 3.24
167 168 3.921021 CACATGTACTCGGTGAGAAAGTC 59.079 47.826 0.00 0.00 34.52 3.01
168 169 3.321111 ACACATGTACTCGGTGAGAAAGT 59.679 43.478 15.65 0.00 36.42 2.66
169 170 3.914312 ACACATGTACTCGGTGAGAAAG 58.086 45.455 15.65 0.00 36.42 2.62
170 171 4.330944 AACACATGTACTCGGTGAGAAA 57.669 40.909 15.65 0.00 36.42 2.52
171 172 4.202172 TGAAACACATGTACTCGGTGAGAA 60.202 41.667 15.65 0.90 36.42 2.87
172 173 3.319689 TGAAACACATGTACTCGGTGAGA 59.680 43.478 15.65 0.00 36.42 3.27
173 174 3.649073 TGAAACACATGTACTCGGTGAG 58.351 45.455 15.65 0.00 36.42 3.51
174 175 3.737032 TGAAACACATGTACTCGGTGA 57.263 42.857 15.65 0.00 36.42 4.02
175 176 4.055360 TCTTGAAACACATGTACTCGGTG 58.945 43.478 0.00 9.55 38.47 4.94
176 177 4.330944 TCTTGAAACACATGTACTCGGT 57.669 40.909 0.00 0.00 0.00 4.69
177 178 4.929211 TCATCTTGAAACACATGTACTCGG 59.071 41.667 0.00 0.00 0.00 4.63
178 179 6.466308 TTCATCTTGAAACACATGTACTCG 57.534 37.500 0.00 0.00 32.71 4.18
194 195 5.690464 AGTAGCACTCCTGATTTCATCTT 57.310 39.130 0.00 0.00 0.00 2.40
220 224 8.612619 GCCGACTGAGATGAAAATTTATTTAGA 58.387 33.333 0.00 0.00 0.00 2.10
224 228 6.375455 ACTGCCGACTGAGATGAAAATTTATT 59.625 34.615 0.00 0.00 0.00 1.40
237 241 0.247460 TGATCCAACTGCCGACTGAG 59.753 55.000 0.00 0.00 0.00 3.35
283 287 0.108662 TGTACTCGCTGCATCCACAG 60.109 55.000 0.00 0.00 40.80 3.66
284 288 0.389817 GTGTACTCGCTGCATCCACA 60.390 55.000 0.00 0.00 0.00 4.17
327 332 7.481642 GTGAAGATCCAAATACGAAGAGTCTA 58.518 38.462 0.00 0.00 0.00 2.59
379 387 8.029782 TGTTCTGTATTAATACCATGTAGCCT 57.970 34.615 20.35 0.00 32.33 4.58
397 405 5.244626 CCAATCCCATTTTCTCTTGTTCTGT 59.755 40.000 0.00 0.00 0.00 3.41
398 406 5.337009 CCCAATCCCATTTTCTCTTGTTCTG 60.337 44.000 0.00 0.00 0.00 3.02
480 2293 5.109500 AGAAGAAGAATGGAGGGTGATTC 57.891 43.478 0.00 0.00 0.00 2.52
487 2300 4.522114 GGGAAGAAGAAGAAGAATGGAGG 58.478 47.826 0.00 0.00 0.00 4.30
561 2394 0.098905 CTCTTCGTTCGATCGCTGGA 59.901 55.000 11.09 3.93 0.00 3.86
619 2452 4.192317 GTTAGGGACTGGAAGCATACAAG 58.808 47.826 0.00 0.00 41.52 3.16
629 2462 1.274011 GGGTTAGGGTTAGGGACTGGA 60.274 57.143 0.00 0.00 41.52 3.86
632 2465 2.272698 GTTGGGTTAGGGTTAGGGACT 58.727 52.381 0.00 0.00 46.37 3.85
644 2477 0.917333 CCTGGCTAGGGGTTGGGTTA 60.917 60.000 8.57 0.00 40.63 2.85
646 2479 2.614013 CCTGGCTAGGGGTTGGGT 60.614 66.667 8.57 0.00 40.63 4.51
647 2480 4.129148 GCCTGGCTAGGGGTTGGG 62.129 72.222 18.96 0.00 44.75 4.12
665 2498 1.273098 TGTCTCTTGTAGGGAGGGGTC 60.273 57.143 0.00 0.00 0.00 4.46
732 2571 4.152964 CTGCCCGCTCAGCTGCTA 62.153 66.667 9.47 0.00 0.00 3.49
778 3584 1.915614 GCGTTGCACTCTCCACATGG 61.916 60.000 0.00 0.00 0.00 3.66
813 3619 1.228154 AAAAGGTCTCCACGCCCAC 60.228 57.895 0.00 0.00 0.00 4.61
814 3620 1.072505 GAAAAGGTCTCCACGCCCA 59.927 57.895 0.00 0.00 0.00 5.36
815 3621 1.674651 GGAAAAGGTCTCCACGCCC 60.675 63.158 0.00 0.00 32.77 6.13
816 3622 2.033194 CGGAAAAGGTCTCCACGCC 61.033 63.158 0.00 0.00 32.77 5.68
940 3757 2.183046 GGGAGTGAGTGAGCGAGC 59.817 66.667 0.00 0.00 0.00 5.03
941 3758 2.888863 GGGGAGTGAGTGAGCGAG 59.111 66.667 0.00 0.00 0.00 5.03
942 3759 3.062466 CGGGGAGTGAGTGAGCGA 61.062 66.667 0.00 0.00 0.00 4.93
943 3760 4.803426 GCGGGGAGTGAGTGAGCG 62.803 72.222 0.00 0.00 0.00 5.03
944 3761 3.363844 GAGCGGGGAGTGAGTGAGC 62.364 68.421 0.00 0.00 0.00 4.26
990 3809 2.282446 GGAGGGACGGGGATGAGA 59.718 66.667 0.00 0.00 0.00 3.27
1025 3844 3.136791 GCTGGCTAGGCTGGCAAC 61.137 66.667 24.64 8.64 41.92 4.17
1114 3951 2.182842 ATCGCCGATCAGCAAAGGC 61.183 57.895 1.15 0.00 45.67 4.35
1430 4267 0.391263 GGCCCGTGGTGAGAAAGTAG 60.391 60.000 0.00 0.00 0.00 2.57
1877 4714 0.392327 GCAGGAAGCTCTTGTCCCTC 60.392 60.000 0.00 0.00 41.15 4.30
1922 4759 2.284995 ACCCTCTCCAGGTCCAGC 60.285 66.667 0.00 0.00 38.30 4.85
1973 4810 2.928396 ACCACCTTCCTCACCCGG 60.928 66.667 0.00 0.00 0.00 5.73
2055 4892 1.071605 GCATCGTCTTCGTTCAAGCT 58.928 50.000 0.00 0.00 38.33 3.74
2058 4895 0.781787 CACGCATCGTCTTCGTTCAA 59.218 50.000 0.00 0.00 38.32 2.69
2158 4995 1.936547 GGCAAAGATGGATCGAGTGAC 59.063 52.381 0.00 0.00 0.00 3.67
2225 5062 1.609208 TGCTGTTTCAGGAGAAAGCC 58.391 50.000 0.09 0.00 43.95 4.35
2243 5080 3.571571 CATGACCACAAAATCTGCACTG 58.428 45.455 0.00 0.00 0.00 3.66
2271 5108 2.512745 AAACGAGTGTGCGTGCCA 60.513 55.556 0.00 0.00 44.86 4.92
2346 5218 7.524912 ACTCTTCATCTGACAATTTTTCATCG 58.475 34.615 0.00 0.00 0.00 3.84
2427 5490 0.099436 GGGAAAGCATGACGCACATC 59.901 55.000 0.00 0.00 46.13 3.06
2447 5511 6.318648 GCATCACTATTGGTTGATAAAGTGGA 59.681 38.462 0.00 0.00 36.01 4.02
2454 5518 5.372343 ACCAGCATCACTATTGGTTGATA 57.628 39.130 0.00 0.00 40.94 2.15
2455 5519 4.240881 ACCAGCATCACTATTGGTTGAT 57.759 40.909 0.00 0.00 40.94 2.57
2456 5520 3.719268 ACCAGCATCACTATTGGTTGA 57.281 42.857 0.00 0.00 40.94 3.18
2479 5543 7.299134 TCCTTTTGGGGTGAATTTCTAACTTA 58.701 34.615 0.00 0.00 40.87 2.24
2533 5598 2.960819 AGCTAGCTAACAACACCGAAG 58.039 47.619 17.69 0.00 0.00 3.79
2537 5602 7.845066 AGTAATAAAGCTAGCTAACAACACC 57.155 36.000 19.70 2.52 0.00 4.16
2612 5677 2.614481 GGAATAAGCTCGTTCACCACCA 60.614 50.000 11.70 0.00 0.00 4.17
2647 5712 8.108378 TGGGGAATTTGTATACTAATCCTTGA 57.892 34.615 12.06 3.47 0.00 3.02
2668 5733 7.104939 ACATATTTTCATGTTGATTGTTGGGG 58.895 34.615 0.00 0.00 35.60 4.96
2741 5816 4.937015 GGCAATGTGTTTTGGAGCATTATT 59.063 37.500 0.00 0.00 31.29 1.40
2761 5836 3.159472 AGACTTTGCAATGAAGATGGCA 58.841 40.909 18.35 0.00 36.67 4.92
2794 5883 3.486383 TGGATGTGTTTCTTTGGAGGTC 58.514 45.455 0.00 0.00 0.00 3.85
2796 5885 4.935352 TTTGGATGTGTTTCTTTGGAGG 57.065 40.909 0.00 0.00 0.00 4.30
2804 5923 6.564328 AGTTCTTGACTTTTGGATGTGTTTC 58.436 36.000 0.00 0.00 33.92 2.78
2820 5944 2.701551 TCCTTCCTTGGGAGTTCTTGA 58.298 47.619 0.00 0.00 31.21 3.02
2836 5960 4.528206 GGGTGATGAATTCCTTTGTTCCTT 59.472 41.667 2.27 0.00 0.00 3.36
2849 5973 0.991920 ACAAGGGTCGGGTGATGAAT 59.008 50.000 0.00 0.00 0.00 2.57
2853 5977 1.374947 CACACAAGGGTCGGGTGAT 59.625 57.895 0.00 0.00 36.42 3.06
2854 5978 1.628238 AACACACAAGGGTCGGGTGA 61.628 55.000 0.00 0.00 36.42 4.02
2860 5984 1.071699 TCTGCCTAACACACAAGGGTC 59.928 52.381 0.00 0.00 33.17 4.46
2862 5986 1.611673 CCTCTGCCTAACACACAAGGG 60.612 57.143 0.00 0.00 33.17 3.95
2873 5997 1.995626 GCCAGTTCCCCTCTGCCTA 60.996 63.158 0.00 0.00 0.00 3.93
2876 6000 2.045536 CAGCCAGTTCCCCTCTGC 60.046 66.667 0.00 0.00 0.00 4.26
2877 6001 0.035630 CTTCAGCCAGTTCCCCTCTG 60.036 60.000 0.00 0.00 0.00 3.35
2878 6002 0.474660 ACTTCAGCCAGTTCCCCTCT 60.475 55.000 0.00 0.00 0.00 3.69
2889 6024 3.073274 ACAACCTCCATAACTTCAGCC 57.927 47.619 0.00 0.00 0.00 4.85
2894 6029 6.128007 CGCAATCTAAACAACCTCCATAACTT 60.128 38.462 0.00 0.00 0.00 2.66
2920 6055 1.422977 TTTGGTAGGGCTGGTGCAGA 61.423 55.000 0.00 0.00 41.91 4.26
2923 6058 0.611896 ATGTTTGGTAGGGCTGGTGC 60.612 55.000 0.00 0.00 38.76 5.01
2928 6063 1.000359 GGCCATGTTTGGTAGGGCT 60.000 57.895 0.00 0.00 45.57 5.19
2945 6080 1.148157 CCTCTGTCACTAATGCGCGG 61.148 60.000 8.83 0.00 0.00 6.46
2946 6081 0.179137 TCCTCTGTCACTAATGCGCG 60.179 55.000 0.00 0.00 0.00 6.86
2967 6102 1.814429 TCCCTTGGTGACAGAGGAAA 58.186 50.000 5.21 0.00 44.54 3.13
2976 6111 0.770499 TGCTGTTGATCCCTTGGTGA 59.230 50.000 0.00 0.00 0.00 4.02
2986 6121 1.330234 TGTGTTGGCATGCTGTTGAT 58.670 45.000 18.92 0.00 0.00 2.57
2990 6125 2.873472 CAATTTTGTGTTGGCATGCTGT 59.127 40.909 18.92 0.00 0.00 4.40
3018 6174 5.696724 CGATAGGTTGGAGATACATTTGGAC 59.303 44.000 0.00 0.00 0.00 4.02
3084 6241 0.409484 ACCTGGGGTTTGATCCTTGG 59.591 55.000 0.00 0.00 27.29 3.61
3085 6242 2.309136 AACCTGGGGTTTGATCCTTG 57.691 50.000 0.00 0.00 44.33 3.61
3086 6243 2.291605 GCTAACCTGGGGTTTGATCCTT 60.292 50.000 13.30 0.00 44.33 3.36
3087 6244 1.285078 GCTAACCTGGGGTTTGATCCT 59.715 52.381 13.30 0.00 44.33 3.24
3088 6245 1.685180 GGCTAACCTGGGGTTTGATCC 60.685 57.143 13.30 4.20 44.33 3.36
3122 6279 4.321966 GATAGCCCAGGAGCCGCC 62.322 72.222 0.00 0.00 0.00 6.13
3123 6280 2.888447 ATGATAGCCCAGGAGCCGC 61.888 63.158 0.00 0.00 0.00 6.53
3124 6281 1.004080 CATGATAGCCCAGGAGCCG 60.004 63.158 0.00 0.00 0.00 5.52
3125 6282 0.475906 AACATGATAGCCCAGGAGCC 59.524 55.000 0.00 0.00 0.00 4.70
3126 6283 2.873649 GCTAACATGATAGCCCAGGAGC 60.874 54.545 21.07 0.00 41.98 4.70
3127 6284 2.369860 TGCTAACATGATAGCCCAGGAG 59.630 50.000 26.54 0.00 46.19 3.69
3128 6285 2.407562 TGCTAACATGATAGCCCAGGA 58.592 47.619 26.54 9.60 46.19 3.86
3129 6286 2.936919 TGCTAACATGATAGCCCAGG 57.063 50.000 26.54 0.00 46.19 4.45
3130 6287 6.882610 TTATTTGCTAACATGATAGCCCAG 57.117 37.500 26.54 0.00 46.19 4.45
3131 6288 7.838079 AATTATTTGCTAACATGATAGCCCA 57.162 32.000 26.54 16.18 46.19 5.36
3132 6289 7.599998 CCAAATTATTTGCTAACATGATAGCCC 59.400 37.037 26.54 6.61 46.19 5.19
3133 6290 8.143835 ACCAAATTATTTGCTAACATGATAGCC 58.856 33.333 26.54 12.95 46.19 3.93
3137 6294 8.641541 CCCTACCAAATTATTTGCTAACATGAT 58.358 33.333 11.82 0.00 39.31 2.45
3138 6295 7.417342 GCCCTACCAAATTATTTGCTAACATGA 60.417 37.037 11.82 0.00 39.31 3.07
3139 6296 6.701400 GCCCTACCAAATTATTTGCTAACATG 59.299 38.462 11.82 0.00 39.31 3.21
3140 6297 6.460953 CGCCCTACCAAATTATTTGCTAACAT 60.461 38.462 11.82 0.00 39.31 2.71
3141 6298 5.163602 CGCCCTACCAAATTATTTGCTAACA 60.164 40.000 11.82 0.00 39.31 2.41
3142 6299 5.278604 CGCCCTACCAAATTATTTGCTAAC 58.721 41.667 11.82 0.00 39.31 2.34
3143 6300 4.339814 CCGCCCTACCAAATTATTTGCTAA 59.660 41.667 11.82 0.00 39.31 3.09
3144 6301 3.886505 CCGCCCTACCAAATTATTTGCTA 59.113 43.478 11.82 2.78 39.31 3.49
3145 6302 2.693074 CCGCCCTACCAAATTATTTGCT 59.307 45.455 11.82 1.69 39.31 3.91
3146 6303 2.801699 GCCGCCCTACCAAATTATTTGC 60.802 50.000 11.82 0.00 39.31 3.68
3147 6304 2.693074 AGCCGCCCTACCAAATTATTTG 59.307 45.455 10.46 10.46 40.32 2.32
3148 6305 2.956333 GAGCCGCCCTACCAAATTATTT 59.044 45.455 0.00 0.00 0.00 1.40
3149 6306 2.583143 GAGCCGCCCTACCAAATTATT 58.417 47.619 0.00 0.00 0.00 1.40
3150 6307 1.202891 GGAGCCGCCCTACCAAATTAT 60.203 52.381 0.00 0.00 0.00 1.28
3151 6308 0.181824 GGAGCCGCCCTACCAAATTA 59.818 55.000 0.00 0.00 0.00 1.40
3152 6309 1.076995 GGAGCCGCCCTACCAAATT 60.077 57.895 0.00 0.00 0.00 1.82
3153 6310 2.001269 AGGAGCCGCCCTACCAAAT 61.001 57.895 0.00 0.00 37.37 2.32
3154 6311 2.609610 AGGAGCCGCCCTACCAAA 60.610 61.111 0.00 0.00 37.37 3.28
3155 6312 3.399181 CAGGAGCCGCCCTACCAA 61.399 66.667 0.61 0.00 37.37 3.67
3165 6322 1.227674 CAACGATAGCCCAGGAGCC 60.228 63.158 0.00 0.00 42.67 4.70
3175 6332 4.870426 AGTGCTTGGTACATTCAACGATAG 59.130 41.667 0.00 0.00 39.30 2.08
3182 6339 4.617253 ACACTAGTGCTTGGTACATTCA 57.383 40.909 22.90 0.00 39.30 2.57
3215 6388 8.972262 TCGTGCTATCTGATTATCTTGTAATC 57.028 34.615 0.00 1.79 35.20 1.75
3221 6394 8.492673 TTTTGTTCGTGCTATCTGATTATCTT 57.507 30.769 0.00 0.00 0.00 2.40
3222 6395 8.492673 TTTTTGTTCGTGCTATCTGATTATCT 57.507 30.769 0.00 0.00 0.00 1.98
3231 6404 9.798885 GTATCTGATATTTTTGTTCGTGCTATC 57.201 33.333 0.00 0.00 0.00 2.08
3252 6425 7.828223 GCTCAGATATGGATTCCATTTGTATCT 59.172 37.037 22.87 19.72 42.23 1.98
3279 6476 4.344978 AGCTAAGTCATACAGTCACTCCA 58.655 43.478 0.00 0.00 0.00 3.86
3284 6481 7.881775 TGATAAGAGCTAAGTCATACAGTCA 57.118 36.000 0.00 0.00 0.00 3.41
3291 6488 8.306038 CAGAGCTTATGATAAGAGCTAAGTCAT 58.694 37.037 15.98 8.02 46.08 3.06
3317 6514 3.772932 TCGCCATTCTTGATGCAAATTC 58.227 40.909 0.00 0.00 34.25 2.17
3319 6516 4.116961 CAATCGCCATTCTTGATGCAAAT 58.883 39.130 0.00 0.00 34.25 2.32
3353 6550 0.733150 GTTCCTTGGCATAACCTCGC 59.267 55.000 0.00 0.00 40.22 5.03
3364 6561 3.451894 GCCCATGCCGTTCCTTGG 61.452 66.667 0.00 0.00 0.00 3.61
3447 6716 2.248280 TTTTCTACTCGCACCAGCAA 57.752 45.000 0.00 0.00 42.27 3.91
3452 6721 6.903883 TTATCATCTTTTTCTACTCGCACC 57.096 37.500 0.00 0.00 0.00 5.01
3473 6742 6.310941 CCACCCACACCCAATCAATATATTA 58.689 40.000 0.00 0.00 0.00 0.98
3478 6747 1.618345 GCCACCCACACCCAATCAATA 60.618 52.381 0.00 0.00 0.00 1.90
3479 6748 0.904394 GCCACCCACACCCAATCAAT 60.904 55.000 0.00 0.00 0.00 2.57
3480 6749 1.532794 GCCACCCACACCCAATCAA 60.533 57.895 0.00 0.00 0.00 2.57
3481 6750 1.136961 TAGCCACCCACACCCAATCA 61.137 55.000 0.00 0.00 0.00 2.57
3482 6751 0.039035 TTAGCCACCCACACCCAATC 59.961 55.000 0.00 0.00 0.00 2.67
3504 6773 8.920174 TCATTCGGGAGTCATAGAATAGTTTTA 58.080 33.333 6.64 0.00 32.70 1.52
3508 6777 5.833667 TGTCATTCGGGAGTCATAGAATAGT 59.166 40.000 6.64 0.00 32.70 2.12
3509 6778 6.332735 TGTCATTCGGGAGTCATAGAATAG 57.667 41.667 6.64 3.71 32.70 1.73
3510 6779 6.724893 TTGTCATTCGGGAGTCATAGAATA 57.275 37.500 6.64 0.00 32.70 1.75
3511 6780 5.614324 TTGTCATTCGGGAGTCATAGAAT 57.386 39.130 0.00 0.00 34.06 2.40
3512 6781 5.614324 ATTGTCATTCGGGAGTCATAGAA 57.386 39.130 0.00 0.00 0.00 2.10
3514 6783 5.118990 ACAATTGTCATTCGGGAGTCATAG 58.881 41.667 4.92 0.00 0.00 2.23
3515 6784 5.097742 ACAATTGTCATTCGGGAGTCATA 57.902 39.130 4.92 0.00 0.00 2.15
3516 6785 3.955471 ACAATTGTCATTCGGGAGTCAT 58.045 40.909 4.92 0.00 0.00 3.06
3518 6787 4.330074 CACTACAATTGTCATTCGGGAGTC 59.670 45.833 15.85 0.00 0.00 3.36
3520 6789 4.330074 GTCACTACAATTGTCATTCGGGAG 59.670 45.833 15.85 6.77 0.00 4.30
3523 6792 4.450757 TGTGTCACTACAATTGTCATTCGG 59.549 41.667 15.85 0.56 37.36 4.30
3535 6804 6.926826 ACGATTTTGTAGATTGTGTCACTACA 59.073 34.615 4.27 0.00 42.69 2.74
3536 6805 7.115805 TCACGATTTTGTAGATTGTGTCACTAC 59.884 37.037 4.27 0.00 39.10 2.73
3537 6806 7.115805 GTCACGATTTTGTAGATTGTGTCACTA 59.884 37.037 4.27 0.00 39.10 2.74
3538 6807 5.989168 TCACGATTTTGTAGATTGTGTCACT 59.011 36.000 4.27 0.00 39.10 3.41
3539 6808 6.071463 GTCACGATTTTGTAGATTGTGTCAC 58.929 40.000 0.00 0.00 39.10 3.67
3540 6809 5.178623 GGTCACGATTTTGTAGATTGTGTCA 59.821 40.000 0.00 0.00 39.10 3.58
3541 6810 5.408604 AGGTCACGATTTTGTAGATTGTGTC 59.591 40.000 0.00 0.48 39.10 3.67
3542 6811 5.305585 AGGTCACGATTTTGTAGATTGTGT 58.694 37.500 0.00 0.00 39.10 3.72
3543 6812 5.862924 AGGTCACGATTTTGTAGATTGTG 57.137 39.130 0.00 0.00 39.31 3.33
3544 6813 5.763204 ACAAGGTCACGATTTTGTAGATTGT 59.237 36.000 0.00 0.00 32.41 2.71
3545 6814 6.073276 TGACAAGGTCACGATTTTGTAGATTG 60.073 38.462 0.00 0.00 37.67 2.67
3546 6815 5.995282 TGACAAGGTCACGATTTTGTAGATT 59.005 36.000 0.00 0.00 37.67 2.40
3547 6816 5.547465 TGACAAGGTCACGATTTTGTAGAT 58.453 37.500 0.00 0.00 37.67 1.98
3548 6817 4.951254 TGACAAGGTCACGATTTTGTAGA 58.049 39.130 0.00 0.00 37.67 2.59
3552 6821 4.151070 CGATTGACAAGGTCACGATTTTG 58.849 43.478 0.00 0.00 42.60 2.44
3553 6822 3.813166 ACGATTGACAAGGTCACGATTTT 59.187 39.130 13.85 0.00 42.60 1.82
3554 6823 3.399330 ACGATTGACAAGGTCACGATTT 58.601 40.909 13.85 0.00 42.60 2.17
3555 6824 3.040147 ACGATTGACAAGGTCACGATT 57.960 42.857 13.85 0.00 42.60 3.34
3556 6825 2.743636 ACGATTGACAAGGTCACGAT 57.256 45.000 13.85 0.85 42.60 3.73
3557 6826 2.035449 AGAACGATTGACAAGGTCACGA 59.965 45.455 13.85 0.00 42.60 4.35
3558 6827 2.155732 CAGAACGATTGACAAGGTCACG 59.844 50.000 0.00 3.48 42.60 4.35
3560 6829 2.143122 GCAGAACGATTGACAAGGTCA 58.857 47.619 0.00 0.00 41.09 4.02
3563 6832 1.197721 GGTGCAGAACGATTGACAAGG 59.802 52.381 0.00 0.00 0.00 3.61
3564 6833 2.146342 AGGTGCAGAACGATTGACAAG 58.854 47.619 0.00 0.00 0.00 3.16
3567 6836 1.400242 GCAAGGTGCAGAACGATTGAC 60.400 52.381 0.00 0.00 44.26 3.18
3568 6837 0.874390 GCAAGGTGCAGAACGATTGA 59.126 50.000 0.00 0.00 44.26 2.57
3569 6838 3.389741 GCAAGGTGCAGAACGATTG 57.610 52.632 0.00 0.00 44.26 2.67
3578 6847 7.106890 TTACATGTAGTATTTAGCAAGGTGCA 58.893 34.615 5.56 0.00 38.03 4.57
3579 6848 7.548196 TTACATGTAGTATTTAGCAAGGTGC 57.452 36.000 5.56 0.00 36.67 5.01
3586 6855 9.370126 CGCAAGAAATTACATGTAGTATTTAGC 57.630 33.333 13.14 14.72 43.02 3.09
3589 6858 9.162764 AGACGCAAGAAATTACATGTAGTATTT 57.837 29.630 13.07 13.07 43.62 1.40
3590 6859 8.604035 CAGACGCAAGAAATTACATGTAGTATT 58.396 33.333 5.56 1.40 43.62 1.89
3591 6860 7.979537 TCAGACGCAAGAAATTACATGTAGTAT 59.020 33.333 5.56 0.00 43.62 2.12
3594 6863 6.531594 TCTCAGACGCAAGAAATTACATGTAG 59.468 38.462 5.56 0.00 43.62 2.74
3596 6865 5.237815 TCTCAGACGCAAGAAATTACATGT 58.762 37.500 2.69 2.69 43.62 3.21
3597 6866 5.784750 TCTCAGACGCAAGAAATTACATG 57.215 39.130 0.00 0.00 43.62 3.21
3598 6867 5.877012 ACATCTCAGACGCAAGAAATTACAT 59.123 36.000 0.00 0.00 43.62 2.29
3600 6869 5.786401 ACATCTCAGACGCAAGAAATTAC 57.214 39.130 0.00 0.00 43.62 1.89
3601 6870 5.931724 TGAACATCTCAGACGCAAGAAATTA 59.068 36.000 0.00 0.00 43.62 1.40
3602 6871 4.756642 TGAACATCTCAGACGCAAGAAATT 59.243 37.500 0.00 0.00 43.62 1.82
3603 6872 4.318332 TGAACATCTCAGACGCAAGAAAT 58.682 39.130 0.00 0.00 43.62 2.17
3615 6884 5.493809 TCAAATGCTCATCTGAACATCTCA 58.506 37.500 0.00 0.00 30.33 3.27
3617 6886 7.339721 AGAAATCAAATGCTCATCTGAACATCT 59.660 33.333 0.00 0.00 30.33 2.90
3618 6887 7.481642 AGAAATCAAATGCTCATCTGAACATC 58.518 34.615 0.00 0.00 30.33 3.06
3619 6888 7.406031 AGAAATCAAATGCTCATCTGAACAT 57.594 32.000 0.00 0.00 32.72 2.71
3713 7025 2.690510 AGGAAGAGAGGCAGGCCC 60.691 66.667 6.70 0.00 36.58 5.80
3881 7193 2.202362 CTCACCGTGTCGCTCTCG 60.202 66.667 0.00 0.00 0.00 4.04
4601 7913 4.025858 TCCAGCACCTGCAGCCTC 62.026 66.667 8.66 0.00 45.16 4.70
5435 8747 4.851114 CAATTCGGTGAGCGCGCG 62.851 66.667 28.44 28.44 0.00 6.86
5436 8748 4.520846 CCAATTCGGTGAGCGCGC 62.521 66.667 26.66 26.66 0.00 6.86
5515 8827 2.741747 GCCATCCTACCGGCTACC 59.258 66.667 0.00 0.00 45.29 3.18
5520 8832 2.070039 TTCCTGGCCATCCTACCGG 61.070 63.158 5.51 0.00 0.00 5.28
5698 9011 3.065786 AGAAAATGCATACACATCAGCCG 59.934 43.478 0.00 0.00 0.00 5.52
5719 9032 5.278512 GCCAGGACAGGTTTTAGAAGAAAAG 60.279 44.000 0.00 0.00 0.00 2.27
5727 9040 2.749621 GACATGCCAGGACAGGTTTTAG 59.250 50.000 0.00 0.00 34.14 1.85
5729 9042 1.145738 AGACATGCCAGGACAGGTTTT 59.854 47.619 0.00 0.00 34.14 2.43
5730 9043 0.773644 AGACATGCCAGGACAGGTTT 59.226 50.000 0.00 0.00 34.14 3.27
5751 9064 7.319646 TGTGCTAGCTTTTTGAAAAGAAAAGA 58.680 30.769 17.23 0.00 46.39 2.52
5783 9096 5.271598 ACATTATCCCTCTCATTTGCCAAA 58.728 37.500 0.00 0.00 0.00 3.28
5896 9298 1.219124 CACACCTCCCTGTCCATCG 59.781 63.158 0.00 0.00 0.00 3.84
5939 9341 9.334693 CACAAGATCTCAAAACTAACTTATTGC 57.665 33.333 0.00 0.00 0.00 3.56
5946 9348 8.188139 TGAAAACCACAAGATCTCAAAACTAAC 58.812 33.333 0.00 0.00 0.00 2.34
5979 9381 7.981142 ACTGTTTCAAATAAGTTAGGGTAGGA 58.019 34.615 0.00 0.00 0.00 2.94
6000 9402 6.926272 ACAACAACAACAACAATAACAACTGT 59.074 30.769 0.00 0.00 0.00 3.55
6001 9403 7.344910 ACAACAACAACAACAATAACAACTG 57.655 32.000 0.00 0.00 0.00 3.16
6002 9404 7.653713 TCAACAACAACAACAACAATAACAACT 59.346 29.630 0.00 0.00 0.00 3.16
6015 9419 7.804614 TCTACACATTTTCAACAACAACAAC 57.195 32.000 0.00 0.00 0.00 3.32
6020 9427 6.151985 ACCAGTTCTACACATTTTCAACAACA 59.848 34.615 0.00 0.00 0.00 3.33
6033 9440 5.655532 TGTAGGATAGGAACCAGTTCTACAC 59.344 44.000 10.19 1.48 39.45 2.90
6036 9443 6.326583 CCATTGTAGGATAGGAACCAGTTCTA 59.673 42.308 10.19 2.26 39.45 2.10
6041 9448 3.973973 TCCCATTGTAGGATAGGAACCAG 59.026 47.826 0.00 0.00 0.00 4.00
6124 9536 8.914011 GCCTTCTTTGGTTTGTAGGATATTTAT 58.086 33.333 0.00 0.00 0.00 1.40
6126 9538 6.954102 AGCCTTCTTTGGTTTGTAGGATATTT 59.046 34.615 0.00 0.00 0.00 1.40
6127 9539 6.494059 AGCCTTCTTTGGTTTGTAGGATATT 58.506 36.000 0.00 0.00 0.00 1.28
6128 9540 6.079712 AGCCTTCTTTGGTTTGTAGGATAT 57.920 37.500 0.00 0.00 0.00 1.63
6129 9541 5.514500 AGCCTTCTTTGGTTTGTAGGATA 57.486 39.130 0.00 0.00 0.00 2.59
6131 9543 3.876309 AGCCTTCTTTGGTTTGTAGGA 57.124 42.857 0.00 0.00 0.00 2.94
6132 9544 4.010349 CCTAGCCTTCTTTGGTTTGTAGG 58.990 47.826 0.00 0.00 0.00 3.18
6177 9744 3.269538 TGTCACGAAACCAAGGAGAAA 57.730 42.857 0.00 0.00 0.00 2.52
6180 9747 2.350772 GCATTGTCACGAAACCAAGGAG 60.351 50.000 0.00 0.00 0.00 3.69
6208 9775 4.520492 GGATGTTAGGGTCATTGGCATAAG 59.480 45.833 0.00 0.00 0.00 1.73
6211 9778 2.244510 TGGATGTTAGGGTCATTGGCAT 59.755 45.455 0.00 0.00 0.00 4.40
6217 9784 4.468510 TCGTAAACTGGATGTTAGGGTCAT 59.531 41.667 0.00 0.00 38.03 3.06
6228 9795 6.585322 CGTCTTAAGTTCTTCGTAAACTGGAT 59.415 38.462 1.63 0.00 37.06 3.41
6240 9807 7.849515 CGTTTTCTTAAAGCGTCTTAAGTTCTT 59.150 33.333 14.24 2.12 39.73 2.52
6244 9811 6.698766 TCTCGTTTTCTTAAAGCGTCTTAAGT 59.301 34.615 14.24 0.00 44.04 2.24
6250 10222 4.968660 ACTCTCGTTTTCTTAAAGCGTC 57.031 40.909 8.18 0.00 44.04 5.19
6253 10225 5.464389 TGTGGTACTCTCGTTTTCTTAAAGC 59.536 40.000 0.00 0.00 0.00 3.51
6377 10379 4.726035 TCCGAAGTGATATACTCCCTCT 57.274 45.455 0.00 0.00 39.18 3.69
6396 10398 4.657075 TTCTTTGTTTCGAAGCGTATCC 57.343 40.909 7.53 0.00 0.00 2.59
6402 10404 3.659444 CGTGACATTCTTTGTTTCGAAGC 59.341 43.478 4.89 4.89 39.18 3.86
6419 10421 2.159572 GGGAAATATGTGTGTGCGTGAC 60.160 50.000 0.00 0.00 0.00 3.67
6424 10432 6.346096 TCTAAGTAGGGAAATATGTGTGTGC 58.654 40.000 0.00 0.00 0.00 4.57
6436 10533 7.833682 TGCATGATTTTGATTCTAAGTAGGGAA 59.166 33.333 0.00 0.00 0.00 3.97
6491 10588 2.755469 GGGTTGTGATGCGGGCAT 60.755 61.111 5.73 5.73 39.69 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.