Multiple sequence alignment - TraesCS4A01G080300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G080300 chr4A 100.000 3437 0 0 1 3437 82845946 82849382 0.000000e+00 6348.0
1 TraesCS4A01G080300 chr4A 93.333 60 4 0 3148 3207 82849029 82849088 4.720000e-14 89.8
2 TraesCS4A01G080300 chr4A 93.333 60 4 0 3084 3143 82849093 82849152 4.720000e-14 89.8
3 TraesCS4A01G080300 chr4D 94.966 2781 61 31 383 3147 380797819 380795102 0.000000e+00 4287.0
4 TraesCS4A01G080300 chr4D 84.906 371 29 10 2 346 380798185 380797816 1.960000e-92 350.0
5 TraesCS4A01G080300 chr4D 96.491 114 4 0 3324 3437 380795072 380794959 4.530000e-44 189.0
6 TraesCS4A01G080300 chr4D 95.876 97 4 0 3148 3244 380795165 380795069 1.280000e-34 158.0
7 TraesCS4A01G080300 chr4B 92.535 2840 71 39 352 3147 468052457 468049715 0.000000e+00 3940.0
8 TraesCS4A01G080300 chr4B 86.154 260 23 8 2 250 468052788 468052531 5.650000e-68 268.0
9 TraesCS4A01G080300 chr4B 90.000 110 7 4 3240 3348 19743503 19743397 4.630000e-29 139.0
10 TraesCS4A01G080300 chr4B 91.753 97 7 1 3148 3244 468049777 468049682 2.150000e-27 134.0
11 TraesCS4A01G080300 chr3A 97.849 93 1 1 3233 3325 303756785 303756876 3.550000e-35 159.0
12 TraesCS4A01G080300 chr1B 95.918 98 4 0 3228 3325 662158876 662158779 3.550000e-35 159.0
13 TraesCS4A01G080300 chr1B 95.918 98 4 0 3228 3325 662161429 662161332 3.550000e-35 159.0
14 TraesCS4A01G080300 chr1B 86.777 121 12 4 3221 3341 196463246 196463130 7.740000e-27 132.0
15 TraesCS4A01G080300 chr1A 97.778 90 2 0 3238 3327 511001507 511001596 4.590000e-34 156.0
16 TraesCS4A01G080300 chr1A 97.701 87 2 0 3239 3325 527694943 527694857 2.140000e-32 150.0
17 TraesCS4A01G080300 chr5D 97.753 89 2 0 3241 3329 231356361 231356273 1.650000e-33 154.0
18 TraesCS4A01G080300 chr3D 90.741 108 9 1 3225 3331 54783425 54783318 3.580000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G080300 chr4A 82845946 82849382 3436 False 2175.866667 6348 95.555333 1 3437 3 chr4A.!!$F1 3436
1 TraesCS4A01G080300 chr4D 380794959 380798185 3226 True 1246.000000 4287 93.059750 2 3437 4 chr4D.!!$R1 3435
2 TraesCS4A01G080300 chr4B 468049682 468052788 3106 True 1447.333333 3940 90.147333 2 3244 3 chr4B.!!$R2 3242

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
900 937 0.030603 AAAAAGGGCCCTCCAAACCA 60.031 50.0 28.84 0.0 38.24 3.67 F
902 939 0.030603 AAAGGGCCCTCCAAACCAAA 60.031 50.0 28.84 0.0 38.24 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2319 2398 0.108804 ACTCAAGATACCACCGCACG 60.109 55.0 0.00 0.0 0.00 5.34 R
2443 2522 1.177401 GGGCCATCCAGAAACTGAAC 58.823 55.0 4.39 0.0 32.44 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.003072 AGATTCCCCAACAACCAGGAT 58.997 47.619 0.00 0.00 0.00 3.24
33 34 1.153539 TTCCCCAACAACCAGGATGA 58.846 50.000 3.17 0.00 39.69 2.92
37 38 1.619654 CCAACAACCAGGATGAAGCA 58.380 50.000 3.17 0.00 39.69 3.91
40 41 3.383761 CAACAACCAGGATGAAGCAAAC 58.616 45.455 3.17 0.00 39.69 2.93
46 47 2.613977 CCAGGATGAAGCAAACTCTCGT 60.614 50.000 0.00 0.00 39.69 4.18
47 48 2.670414 CAGGATGAAGCAAACTCTCGTC 59.330 50.000 0.00 0.00 39.69 4.20
93 94 3.223589 GTTGCCACGCCCCACTTT 61.224 61.111 0.00 0.00 0.00 2.66
94 95 2.443016 TTGCCACGCCCCACTTTT 60.443 55.556 0.00 0.00 0.00 2.27
95 96 2.790791 TTGCCACGCCCCACTTTTG 61.791 57.895 0.00 0.00 0.00 2.44
96 97 3.989787 GCCACGCCCCACTTTTGG 61.990 66.667 0.00 0.00 43.50 3.28
97 98 3.989787 CCACGCCCCACTTTTGGC 61.990 66.667 0.00 0.00 42.35 4.52
98 99 2.912025 CACGCCCCACTTTTGGCT 60.912 61.111 0.00 0.00 45.71 4.75
120 129 4.268767 ACAAAAGGAAGAAACGAACGAC 57.731 40.909 0.14 0.00 0.00 4.34
136 145 1.272769 ACGACGGGGAGAAGAAAGAAG 59.727 52.381 0.00 0.00 0.00 2.85
149 158 1.447317 AAAGAAGCACACACCGGCTG 61.447 55.000 0.00 1.20 40.93 4.85
221 233 9.830975 TTTAATCGTAATGATGAGATGAAGGAA 57.169 29.630 0.00 0.00 37.39 3.36
235 247 0.109153 AAGGAACCCACCCGTGTAAC 59.891 55.000 0.00 0.00 0.00 2.50
271 288 5.067023 ACTTTTGCAGTTCTTCTTCTCAAGG 59.933 40.000 0.00 0.00 27.32 3.61
284 311 8.045507 TCTTCTTCTCAAGGAGTACGTATAGAA 58.954 37.037 0.00 0.05 35.50 2.10
339 367 8.940924 GGATACTTATTTGTTTTATTTCGACGC 58.059 33.333 0.00 0.00 0.00 5.19
340 368 6.826227 ACTTATTTGTTTTATTTCGACGCG 57.174 33.333 3.53 3.53 0.00 6.01
341 369 6.365050 ACTTATTTGTTTTATTTCGACGCGT 58.635 32.000 13.85 13.85 0.00 6.01
342 370 6.852345 ACTTATTTGTTTTATTTCGACGCGTT 59.148 30.769 15.53 0.00 0.00 4.84
343 371 4.915250 TTTGTTTTATTTCGACGCGTTG 57.085 36.364 20.76 20.76 0.00 4.10
344 372 3.856104 TGTTTTATTTCGACGCGTTGA 57.144 38.095 25.09 25.09 0.00 3.18
345 373 4.193021 TGTTTTATTTCGACGCGTTGAA 57.807 36.364 32.76 32.76 0.00 2.69
346 374 3.961240 TGTTTTATTTCGACGCGTTGAAC 59.039 39.130 35.42 25.33 33.01 3.18
347 375 3.856104 TTTATTTCGACGCGTTGAACA 57.144 38.095 35.42 26.38 33.01 3.18
348 376 4.392619 TTTATTTCGACGCGTTGAACAT 57.607 36.364 35.42 29.65 33.01 2.71
349 377 5.512573 TTTATTTCGACGCGTTGAACATA 57.487 34.783 35.42 28.83 33.01 2.29
350 378 2.841070 TTTCGACGCGTTGAACATAC 57.159 45.000 35.42 10.67 33.01 2.39
356 384 3.215244 GACGCGTTGAACATACAAGTTG 58.785 45.455 15.53 0.00 0.00 3.16
361 389 4.211389 CGTTGAACATACAAGTTGCAGAC 58.789 43.478 1.81 0.00 0.00 3.51
363 391 5.444122 GTTGAACATACAAGTTGCAGACTC 58.556 41.667 1.81 0.00 37.72 3.36
377 405 4.654915 TGCAGACTCATCCTCAAATTTGA 58.345 39.130 19.45 19.45 35.57 2.69
378 406 5.072055 TGCAGACTCATCCTCAAATTTGAA 58.928 37.500 20.82 8.56 36.64 2.69
406 434 2.036346 AGAAAGTAAACCTGTACGGCGT 59.964 45.455 19.64 19.64 35.61 5.68
546 574 9.739276 AAAAGGAAAAAGGAAAATGGGATTATC 57.261 29.630 0.00 0.00 0.00 1.75
666 703 2.675371 GGAACGGAGGGGAAAGGG 59.325 66.667 0.00 0.00 0.00 3.95
729 766 0.179111 TCTCCTCAAATGTAGCGCCG 60.179 55.000 2.29 0.00 0.00 6.46
730 767 1.153449 TCCTCAAATGTAGCGCCGG 60.153 57.895 2.29 0.00 0.00 6.13
731 768 2.180204 CCTCAAATGTAGCGCCGGG 61.180 63.158 2.29 0.00 0.00 5.73
732 769 2.124901 TCAAATGTAGCGCCGGGG 60.125 61.111 15.40 15.40 0.00 5.73
733 770 2.124901 CAAATGTAGCGCCGGGGA 60.125 61.111 24.68 0.36 0.00 4.81
734 771 1.747367 CAAATGTAGCGCCGGGGAA 60.747 57.895 24.68 6.27 0.00 3.97
765 802 1.476845 AACCAAACCAAATCGCCCCC 61.477 55.000 0.00 0.00 0.00 5.40
782 819 1.072015 CCCCCAATCAAGCAAAGCAAA 59.928 47.619 0.00 0.00 0.00 3.68
786 823 3.626670 CCCAATCAAGCAAAGCAAACAAA 59.373 39.130 0.00 0.00 0.00 2.83
791 828 5.280328 TCAAGCAAAGCAAACAAACAAAG 57.720 34.783 0.00 0.00 0.00 2.77
801 838 4.843448 GCAAACAAACAAAGAAACAAACCG 59.157 37.500 0.00 0.00 0.00 4.44
886 923 2.034179 AGAAAACGGGAAGCGGAAAAAG 59.966 45.455 0.00 0.00 0.00 2.27
900 937 0.030603 AAAAAGGGCCCTCCAAACCA 60.031 50.000 28.84 0.00 38.24 3.67
902 939 0.030603 AAAGGGCCCTCCAAACCAAA 60.031 50.000 28.84 0.00 38.24 3.28
903 940 0.762842 AAGGGCCCTCCAAACCAAAC 60.763 55.000 28.84 0.00 38.24 2.93
904 941 2.214216 GGGCCCTCCAAACCAAACC 61.214 63.158 17.04 0.00 35.00 3.27
905 942 2.214216 GGCCCTCCAAACCAAACCC 61.214 63.158 0.00 0.00 0.00 4.11
906 943 1.458588 GCCCTCCAAACCAAACCCA 60.459 57.895 0.00 0.00 0.00 4.51
907 944 1.471829 GCCCTCCAAACCAAACCCAG 61.472 60.000 0.00 0.00 0.00 4.45
908 945 0.831711 CCCTCCAAACCAAACCCAGG 60.832 60.000 0.00 0.00 0.00 4.45
909 946 0.831711 CCTCCAAACCAAACCCAGGG 60.832 60.000 2.85 2.85 0.00 4.45
910 947 0.831711 CTCCAAACCAAACCCAGGGG 60.832 60.000 11.37 6.87 42.03 4.79
911 948 1.234529 CCAAACCAAACCCAGGGGA 59.765 57.895 11.37 0.00 38.96 4.81
912 949 0.831711 CCAAACCAAACCCAGGGGAG 60.832 60.000 11.37 0.00 38.96 4.30
913 950 0.831711 CAAACCAAACCCAGGGGAGG 60.832 60.000 11.37 11.01 38.96 4.30
922 959 4.505970 CAGGGGAGGGGAGGGGAG 62.506 77.778 0.00 0.00 0.00 4.30
960 1000 1.072159 CCAATCCCGAGATCCAGCC 59.928 63.158 0.00 0.00 0.00 4.85
963 1003 2.049627 AATCCCGAGATCCAGCCAGC 62.050 60.000 0.00 0.00 0.00 4.85
964 1004 4.247380 CCCGAGATCCAGCCAGCC 62.247 72.222 0.00 0.00 0.00 4.85
965 1005 3.473647 CCGAGATCCAGCCAGCCA 61.474 66.667 0.00 0.00 0.00 4.75
966 1006 2.108566 CGAGATCCAGCCAGCCAG 59.891 66.667 0.00 0.00 0.00 4.85
967 1007 2.509916 GAGATCCAGCCAGCCAGG 59.490 66.667 0.00 0.00 41.84 4.45
968 1008 3.095163 AGATCCAGCCAGCCAGGG 61.095 66.667 0.00 0.00 38.09 4.45
1165 1205 3.827898 GGTCCGTCTGCTCCCTCG 61.828 72.222 0.00 0.00 0.00 4.63
1644 1723 2.507547 TATGTGCGGGCGAACGTC 60.508 61.111 0.00 0.00 35.98 4.34
1656 1735 4.719369 AACGTCGCTGGGCTCGTC 62.719 66.667 12.73 0.00 36.32 4.20
1791 1870 2.708255 CGACCCGCGTCTCTCTAC 59.292 66.667 4.92 0.00 36.82 2.59
2037 2116 7.503566 ACCTACATTGATGATATTGTGAAAGGG 59.496 37.037 0.00 0.00 0.00 3.95
2319 2398 2.294512 CCAAACAGGGCTCAAGAAGTTC 59.705 50.000 0.00 0.00 0.00 3.01
2443 2522 3.134401 AGCGCAAGATGACTGACTG 57.866 52.632 11.47 0.00 43.02 3.51
2569 2648 4.204978 GTGAAACGAAACAAGCATGAAGTG 59.795 41.667 0.00 0.00 0.00 3.16
2818 2898 9.958234 CTTCGATCAATATTTAGTTCTCTCTGA 57.042 33.333 0.00 0.00 0.00 3.27
2930 3010 9.294030 CTTTGCCATGACAATCTTAAAATCTAC 57.706 33.333 0.00 0.00 0.00 2.59
2951 3031 4.721132 ACCTTTTCCTTTGTGGATACGAA 58.279 39.130 0.00 0.00 45.68 3.85
2961 3041 6.038603 CCTTTGTGGATACGAATCATGTGATT 59.961 38.462 7.91 7.91 42.01 2.57
2962 3042 7.389803 TTTGTGGATACGAATCATGTGATTT 57.610 32.000 9.42 0.00 44.14 2.17
3048 3128 4.093998 GGATTTGTGAGTGCTACTGTGATG 59.906 45.833 0.00 0.00 0.00 3.07
3076 3156 9.490379 AACTTTTCTGAGACAGATTAAACGTAT 57.510 29.630 2.30 0.00 40.39 3.06
3077 3157 8.926710 ACTTTTCTGAGACAGATTAAACGTATG 58.073 33.333 2.30 0.00 40.39 2.39
3089 3169 1.519408 AACGTATGCGCTTCTTTGGT 58.481 45.000 9.73 0.00 42.83 3.67
3090 3170 1.076332 ACGTATGCGCTTCTTTGGTC 58.924 50.000 9.73 0.00 42.83 4.02
3091 3171 1.075542 CGTATGCGCTTCTTTGGTCA 58.924 50.000 9.73 0.00 0.00 4.02
3092 3172 1.665679 CGTATGCGCTTCTTTGGTCAT 59.334 47.619 9.73 0.00 0.00 3.06
3093 3173 2.095853 CGTATGCGCTTCTTTGGTCATT 59.904 45.455 9.73 0.00 0.00 2.57
3094 3174 2.642139 ATGCGCTTCTTTGGTCATTG 57.358 45.000 9.73 0.00 0.00 2.82
3095 3175 0.597568 TGCGCTTCTTTGGTCATTGG 59.402 50.000 9.73 0.00 0.00 3.16
3096 3176 0.598065 GCGCTTCTTTGGTCATTGGT 59.402 50.000 0.00 0.00 0.00 3.67
3097 3177 1.810151 GCGCTTCTTTGGTCATTGGTA 59.190 47.619 0.00 0.00 0.00 3.25
3098 3178 2.423538 GCGCTTCTTTGGTCATTGGTAT 59.576 45.455 0.00 0.00 0.00 2.73
3099 3179 3.625764 GCGCTTCTTTGGTCATTGGTATA 59.374 43.478 0.00 0.00 0.00 1.47
3100 3180 4.260784 GCGCTTCTTTGGTCATTGGTATAG 60.261 45.833 0.00 0.00 0.00 1.31
3101 3181 4.260784 CGCTTCTTTGGTCATTGGTATAGC 60.261 45.833 0.00 0.00 0.00 2.97
3102 3182 4.884164 GCTTCTTTGGTCATTGGTATAGCT 59.116 41.667 3.20 0.00 0.00 3.32
3103 3183 5.220931 GCTTCTTTGGTCATTGGTATAGCTG 60.221 44.000 0.00 0.00 0.00 4.24
3104 3184 5.692115 TCTTTGGTCATTGGTATAGCTGA 57.308 39.130 0.00 0.00 0.00 4.26
3105 3185 6.252599 TCTTTGGTCATTGGTATAGCTGAT 57.747 37.500 0.00 0.00 0.00 2.90
3106 3186 7.373617 TCTTTGGTCATTGGTATAGCTGATA 57.626 36.000 0.00 0.00 0.00 2.15
3107 3187 7.977818 TCTTTGGTCATTGGTATAGCTGATAT 58.022 34.615 0.00 0.00 0.00 1.63
3108 3188 8.439971 TCTTTGGTCATTGGTATAGCTGATATT 58.560 33.333 0.00 0.00 0.00 1.28
3109 3189 9.725019 CTTTGGTCATTGGTATAGCTGATATTA 57.275 33.333 0.00 0.00 0.00 0.98
3114 3194 9.994432 GTCATTGGTATAGCTGATATTATTTGC 57.006 33.333 0.00 0.00 0.00 3.68
3115 3195 9.737844 TCATTGGTATAGCTGATATTATTTGCA 57.262 29.630 0.00 0.00 0.00 4.08
3120 3200 9.294030 GGTATAGCTGATATTATTTGCAATTGC 57.706 33.333 23.69 23.69 42.50 3.56
3133 3213 2.343101 GCAATTGCAATGTGCTCATGT 58.657 42.857 25.36 4.51 45.31 3.21
3134 3214 2.347452 GCAATTGCAATGTGCTCATGTC 59.653 45.455 25.36 9.82 45.31 3.06
3135 3215 2.927477 CAATTGCAATGTGCTCATGTCC 59.073 45.455 13.82 0.00 45.31 4.02
3136 3216 1.618487 TTGCAATGTGCTCATGTCCA 58.382 45.000 1.29 0.00 45.31 4.02
3137 3217 1.842052 TGCAATGTGCTCATGTCCAT 58.158 45.000 1.29 0.00 45.31 3.41
3138 3218 1.746787 TGCAATGTGCTCATGTCCATC 59.253 47.619 1.29 0.00 45.31 3.51
3139 3219 2.022195 GCAATGTGCTCATGTCCATCT 58.978 47.619 1.29 0.00 40.96 2.90
3140 3220 2.223502 GCAATGTGCTCATGTCCATCTG 60.224 50.000 1.29 0.00 40.96 2.90
3141 3221 1.676746 ATGTGCTCATGTCCATCTGC 58.323 50.000 0.00 0.00 32.51 4.26
3142 3222 0.616891 TGTGCTCATGTCCATCTGCT 59.383 50.000 0.00 0.00 0.00 4.24
3143 3223 1.003928 TGTGCTCATGTCCATCTGCTT 59.996 47.619 0.00 0.00 0.00 3.91
3144 3224 1.400846 GTGCTCATGTCCATCTGCTTG 59.599 52.381 0.00 0.00 0.00 4.01
3145 3225 1.279846 TGCTCATGTCCATCTGCTTGA 59.720 47.619 0.00 0.00 0.00 3.02
3146 3226 2.290450 TGCTCATGTCCATCTGCTTGAA 60.290 45.455 0.00 0.00 0.00 2.69
3147 3227 2.097142 GCTCATGTCCATCTGCTTGAAC 59.903 50.000 0.00 0.00 0.00 3.18
3148 3228 3.607741 CTCATGTCCATCTGCTTGAACT 58.392 45.455 0.00 0.00 0.00 3.01
3149 3229 4.008330 CTCATGTCCATCTGCTTGAACTT 58.992 43.478 0.00 0.00 0.00 2.66
3150 3230 4.401022 TCATGTCCATCTGCTTGAACTTT 58.599 39.130 0.00 0.00 0.00 2.66
3151 3231 4.216902 TCATGTCCATCTGCTTGAACTTTG 59.783 41.667 0.00 0.00 0.00 2.77
3152 3232 2.886523 TGTCCATCTGCTTGAACTTTGG 59.113 45.455 0.00 0.00 0.00 3.28
3185 3265 9.294030 GTATAGCTGATATTATTTGCAATTGCC 57.706 33.333 26.94 10.18 41.18 4.52
3208 3288 2.353323 GTGCTCATGTTCATCTGCTCA 58.647 47.619 0.00 0.00 0.00 4.26
3244 3324 7.849804 TTGGCTTTCTCATTATGAACTACTC 57.150 36.000 0.00 0.00 0.00 2.59
3245 3325 6.349300 TGGCTTTCTCATTATGAACTACTCC 58.651 40.000 0.00 0.00 0.00 3.85
3246 3326 5.760743 GGCTTTCTCATTATGAACTACTCCC 59.239 44.000 0.00 0.00 0.00 4.30
3247 3327 6.408662 GGCTTTCTCATTATGAACTACTCCCT 60.409 42.308 0.00 0.00 0.00 4.20
3248 3328 6.704050 GCTTTCTCATTATGAACTACTCCCTC 59.296 42.308 0.00 0.00 0.00 4.30
3249 3329 7.418483 GCTTTCTCATTATGAACTACTCCCTCT 60.418 40.741 0.00 0.00 0.00 3.69
3250 3330 6.968263 TCTCATTATGAACTACTCCCTCTG 57.032 41.667 0.00 0.00 0.00 3.35
3251 3331 6.436027 TCTCATTATGAACTACTCCCTCTGT 58.564 40.000 0.00 0.00 0.00 3.41
3252 3332 7.583625 TCTCATTATGAACTACTCCCTCTGTA 58.416 38.462 0.00 0.00 0.00 2.74
3253 3333 8.059461 TCTCATTATGAACTACTCCCTCTGTAA 58.941 37.037 0.00 0.00 0.00 2.41
3254 3334 8.603898 TCATTATGAACTACTCCCTCTGTAAA 57.396 34.615 0.00 0.00 0.00 2.01
3255 3335 8.475639 TCATTATGAACTACTCCCTCTGTAAAC 58.524 37.037 0.00 0.00 0.00 2.01
3256 3336 8.478877 CATTATGAACTACTCCCTCTGTAAACT 58.521 37.037 0.00 0.00 0.00 2.66
3257 3337 6.936968 ATGAACTACTCCCTCTGTAAACTT 57.063 37.500 0.00 0.00 0.00 2.66
3258 3338 6.742559 TGAACTACTCCCTCTGTAAACTTT 57.257 37.500 0.00 0.00 0.00 2.66
3259 3339 7.133133 TGAACTACTCCCTCTGTAAACTTTT 57.867 36.000 0.00 0.00 0.00 2.27
3260 3340 8.253867 TGAACTACTCCCTCTGTAAACTTTTA 57.746 34.615 0.00 0.00 0.00 1.52
3261 3341 8.877195 TGAACTACTCCCTCTGTAAACTTTTAT 58.123 33.333 0.00 0.00 0.00 1.40
3267 3347 8.041919 ACTCCCTCTGTAAACTTTTATAAGAGC 58.958 37.037 13.76 0.00 36.27 4.09
3268 3348 7.039882 TCCCTCTGTAAACTTTTATAAGAGCG 58.960 38.462 13.76 9.07 36.27 5.03
3269 3349 6.817140 CCCTCTGTAAACTTTTATAAGAGCGT 59.183 38.462 13.76 0.00 36.27 5.07
3270 3350 7.333672 CCCTCTGTAAACTTTTATAAGAGCGTT 59.666 37.037 13.76 1.38 36.27 4.84
3271 3351 8.718734 CCTCTGTAAACTTTTATAAGAGCGTTT 58.281 33.333 13.76 6.02 36.27 3.60
3279 3359 9.654663 AACTTTTATAAGAGCGTTTAGATCACT 57.345 29.630 3.00 0.00 37.82 3.41
3286 3366 9.953697 ATAAGAGCGTTTAGATCACTAAAGTAG 57.046 33.333 0.00 0.00 45.42 2.57
3287 3367 7.393841 AGAGCGTTTAGATCACTAAAGTAGT 57.606 36.000 0.00 0.00 45.42 2.73
3301 3381 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
3302 3382 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
3303 3383 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
3304 3384 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
3311 3391 9.601217 AGTGATCTAAACGCTCTTATATTTGTT 57.399 29.630 0.00 0.00 0.00 2.83
3319 3399 7.772332 ACGCTCTTATATTTGTTTACAGAGG 57.228 36.000 0.00 0.00 0.00 3.69
3320 3400 6.761714 ACGCTCTTATATTTGTTTACAGAGGG 59.238 38.462 8.36 8.36 38.95 4.30
3321 3401 6.984474 CGCTCTTATATTTGTTTACAGAGGGA 59.016 38.462 4.76 0.00 36.40 4.20
3322 3402 7.169982 CGCTCTTATATTTGTTTACAGAGGGAG 59.830 40.741 4.76 0.00 36.40 4.30
3323 3403 7.988028 GCTCTTATATTTGTTTACAGAGGGAGT 59.012 37.037 0.00 0.00 0.00 3.85
3332 3412 6.971340 TGTTTACAGAGGGAGTACTAGATCT 58.029 40.000 0.00 0.00 0.00 2.75
3416 3496 6.208599 TGGGAATCACCAATTGTCTAGAAAAC 59.791 38.462 4.43 0.00 41.20 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.782691 TGTTGGGGAATCTCTCACATTAGA 59.217 41.667 0.00 0.00 0.00 2.10
6 7 2.224769 TGGTTGTTGGGGAATCTCTCAC 60.225 50.000 0.00 0.00 0.00 3.51
13 14 1.715931 TCATCCTGGTTGTTGGGGAAT 59.284 47.619 4.76 0.00 0.00 3.01
31 32 1.964223 AGGAGACGAGAGTTTGCTTCA 59.036 47.619 0.00 0.00 44.28 3.02
33 34 1.001406 CCAGGAGACGAGAGTTTGCTT 59.999 52.381 0.00 0.00 44.28 3.91
37 38 2.448453 CCTACCAGGAGACGAGAGTTT 58.552 52.381 0.00 0.00 41.30 2.66
40 41 1.104577 GGCCTACCAGGAGACGAGAG 61.105 65.000 0.00 0.00 37.67 3.20
91 92 5.125739 TCGTTTCTTCCTTTTGTAGCCAAAA 59.874 36.000 1.68 1.68 45.76 2.44
93 94 4.200874 TCGTTTCTTCCTTTTGTAGCCAA 58.799 39.130 0.00 0.00 0.00 4.52
94 95 3.811083 TCGTTTCTTCCTTTTGTAGCCA 58.189 40.909 0.00 0.00 0.00 4.75
95 96 4.534168 GTTCGTTTCTTCCTTTTGTAGCC 58.466 43.478 0.00 0.00 0.00 3.93
96 97 4.025480 TCGTTCGTTTCTTCCTTTTGTAGC 60.025 41.667 0.00 0.00 0.00 3.58
97 98 5.429615 GTCGTTCGTTTCTTCCTTTTGTAG 58.570 41.667 0.00 0.00 0.00 2.74
98 99 4.026640 CGTCGTTCGTTTCTTCCTTTTGTA 60.027 41.667 0.00 0.00 34.52 2.41
120 129 1.270839 TGTGCTTCTTTCTTCTCCCCG 60.271 52.381 0.00 0.00 0.00 5.73
121 130 2.155279 GTGTGCTTCTTTCTTCTCCCC 58.845 52.381 0.00 0.00 0.00 4.81
136 145 3.595758 AAAGCAGCCGGTGTGTGC 61.596 61.111 1.90 7.74 37.48 4.57
149 158 1.036707 TTACAGGGTGGTTGCAAAGC 58.963 50.000 0.00 0.00 46.39 3.51
219 231 0.179051 TGTGTTACACGGGTGGGTTC 60.179 55.000 11.07 0.00 37.14 3.62
221 233 1.146707 GTGTGTTACACGGGTGGGT 59.853 57.895 11.07 0.00 39.53 4.51
235 247 0.040425 GCAAAAGTAGCCCGTGTGTG 60.040 55.000 0.00 0.00 0.00 3.82
242 254 3.149981 AGAAGAACTGCAAAAGTAGCCC 58.850 45.455 0.00 0.00 38.56 5.19
337 365 1.969256 GCAACTTGTATGTTCAACGCG 59.031 47.619 3.53 3.53 0.00 6.01
339 367 4.024893 AGTCTGCAACTTGTATGTTCAACG 60.025 41.667 0.00 0.00 33.03 4.10
340 368 5.007626 TGAGTCTGCAACTTGTATGTTCAAC 59.992 40.000 3.56 0.00 38.74 3.18
341 369 5.122519 TGAGTCTGCAACTTGTATGTTCAA 58.877 37.500 3.56 0.00 38.74 2.69
342 370 4.702831 TGAGTCTGCAACTTGTATGTTCA 58.297 39.130 3.56 0.00 38.74 3.18
343 371 5.163814 GGATGAGTCTGCAACTTGTATGTTC 60.164 44.000 3.56 0.00 38.74 3.18
344 372 4.697352 GGATGAGTCTGCAACTTGTATGTT 59.303 41.667 3.56 0.00 38.74 2.71
345 373 4.019860 AGGATGAGTCTGCAACTTGTATGT 60.020 41.667 3.56 0.00 38.74 2.29
346 374 4.511527 AGGATGAGTCTGCAACTTGTATG 58.488 43.478 3.56 0.00 38.74 2.39
347 375 4.223700 TGAGGATGAGTCTGCAACTTGTAT 59.776 41.667 3.56 0.80 38.74 2.29
348 376 3.578282 TGAGGATGAGTCTGCAACTTGTA 59.422 43.478 3.56 0.00 38.74 2.41
349 377 2.369860 TGAGGATGAGTCTGCAACTTGT 59.630 45.455 3.56 0.00 38.74 3.16
350 378 3.049708 TGAGGATGAGTCTGCAACTTG 57.950 47.619 3.56 0.00 38.74 3.16
356 384 5.397326 GTTCAAATTTGAGGATGAGTCTGC 58.603 41.667 19.64 0.00 38.61 4.26
361 389 4.154737 TCTGCGTTCAAATTTGAGGATGAG 59.845 41.667 19.64 13.25 38.61 2.90
363 391 4.424061 TCTGCGTTCAAATTTGAGGATG 57.576 40.909 19.64 13.03 38.61 3.51
377 405 4.196971 ACAGGTTTACTTTCTTCTGCGTT 58.803 39.130 0.00 0.00 0.00 4.84
378 406 3.805207 ACAGGTTTACTTTCTTCTGCGT 58.195 40.909 0.00 0.00 0.00 5.24
551 579 7.491682 TGACGGGTATAATGAAGGTAAACTAC 58.508 38.462 0.00 0.00 0.00 2.73
552 580 7.658525 TGACGGGTATAATGAAGGTAAACTA 57.341 36.000 0.00 0.00 0.00 2.24
553 581 6.549433 TGACGGGTATAATGAAGGTAAACT 57.451 37.500 0.00 0.00 0.00 2.66
554 582 7.614124 TTTGACGGGTATAATGAAGGTAAAC 57.386 36.000 0.00 0.00 0.00 2.01
555 583 7.884354 ACTTTTGACGGGTATAATGAAGGTAAA 59.116 33.333 0.00 0.00 0.00 2.01
556 584 7.396418 ACTTTTGACGGGTATAATGAAGGTAA 58.604 34.615 0.00 0.00 0.00 2.85
557 585 6.949715 ACTTTTGACGGGTATAATGAAGGTA 58.050 36.000 0.00 0.00 0.00 3.08
558 586 5.812286 ACTTTTGACGGGTATAATGAAGGT 58.188 37.500 0.00 0.00 0.00 3.50
559 587 6.019318 CGTACTTTTGACGGGTATAATGAAGG 60.019 42.308 0.00 0.00 36.66 3.46
560 588 6.753279 TCGTACTTTTGACGGGTATAATGAAG 59.247 38.462 0.00 0.00 40.70 3.02
561 589 6.629128 TCGTACTTTTGACGGGTATAATGAA 58.371 36.000 0.00 0.00 40.70 2.57
562 590 6.206395 TCGTACTTTTGACGGGTATAATGA 57.794 37.500 0.00 0.00 40.70 2.57
563 591 6.890663 TTCGTACTTTTGACGGGTATAATG 57.109 37.500 0.00 0.00 40.70 1.90
571 603 1.196127 GGGCTTTCGTACTTTTGACGG 59.804 52.381 0.00 0.00 40.70 4.79
659 696 0.186143 GGATGGATGGACCCCTTTCC 59.814 60.000 0.00 0.00 38.00 3.13
666 703 1.005215 GGATGGATGGATGGATGGACC 59.995 57.143 0.00 0.00 39.54 4.46
729 766 0.252103 GTTTCCCTTTCCCCTTCCCC 60.252 60.000 0.00 0.00 0.00 4.81
730 767 0.252103 GGTTTCCCTTTCCCCTTCCC 60.252 60.000 0.00 0.00 0.00 3.97
731 768 0.485543 TGGTTTCCCTTTCCCCTTCC 59.514 55.000 0.00 0.00 0.00 3.46
732 769 2.367567 GTTTGGTTTCCCTTTCCCCTTC 59.632 50.000 0.00 0.00 0.00 3.46
733 770 2.404559 GTTTGGTTTCCCTTTCCCCTT 58.595 47.619 0.00 0.00 0.00 3.95
734 771 1.413953 GGTTTGGTTTCCCTTTCCCCT 60.414 52.381 0.00 0.00 0.00 4.79
741 778 1.343142 GCGATTTGGTTTGGTTTCCCT 59.657 47.619 0.00 0.00 0.00 4.20
765 802 4.094590 TGTTTGTTTGCTTTGCTTGATTGG 59.905 37.500 0.00 0.00 0.00 3.16
766 803 5.219226 TGTTTGTTTGCTTTGCTTGATTG 57.781 34.783 0.00 0.00 0.00 2.67
767 804 5.876612 TTGTTTGTTTGCTTTGCTTGATT 57.123 30.435 0.00 0.00 0.00 2.57
768 805 5.642919 TCTTTGTTTGTTTGCTTTGCTTGAT 59.357 32.000 0.00 0.00 0.00 2.57
769 806 4.993584 TCTTTGTTTGTTTGCTTTGCTTGA 59.006 33.333 0.00 0.00 0.00 3.02
770 807 5.280328 TCTTTGTTTGTTTGCTTTGCTTG 57.720 34.783 0.00 0.00 0.00 4.01
771 808 5.938438 TTCTTTGTTTGTTTGCTTTGCTT 57.062 30.435 0.00 0.00 0.00 3.91
772 809 5.238214 TGTTTCTTTGTTTGTTTGCTTTGCT 59.762 32.000 0.00 0.00 0.00 3.91
773 810 5.447573 TGTTTCTTTGTTTGTTTGCTTTGC 58.552 33.333 0.00 0.00 0.00 3.68
774 811 7.096681 GGTTTGTTTCTTTGTTTGTTTGCTTTG 60.097 33.333 0.00 0.00 0.00 2.77
775 812 6.915300 GGTTTGTTTCTTTGTTTGTTTGCTTT 59.085 30.769 0.00 0.00 0.00 3.51
776 813 6.434596 GGTTTGTTTCTTTGTTTGTTTGCTT 58.565 32.000 0.00 0.00 0.00 3.91
777 814 5.333721 CGGTTTGTTTCTTTGTTTGTTTGCT 60.334 36.000 0.00 0.00 0.00 3.91
778 815 4.843448 CGGTTTGTTTCTTTGTTTGTTTGC 59.157 37.500 0.00 0.00 0.00 3.68
779 816 6.216750 TCGGTTTGTTTCTTTGTTTGTTTG 57.783 33.333 0.00 0.00 0.00 2.93
782 819 5.107798 CGTTTCGGTTTGTTTCTTTGTTTGT 60.108 36.000 0.00 0.00 0.00 2.83
786 823 4.422546 TCGTTTCGGTTTGTTTCTTTGT 57.577 36.364 0.00 0.00 0.00 2.83
791 828 2.103388 CGGTTCGTTTCGGTTTGTTTC 58.897 47.619 0.00 0.00 0.00 2.78
801 838 0.038526 TGCTCTCCTCGGTTCGTTTC 60.039 55.000 0.00 0.00 0.00 2.78
836 873 4.873129 TCGATTCGCCTCGCCTGC 62.873 66.667 0.00 0.00 38.52 4.85
886 923 2.214216 GGTTTGGTTTGGAGGGCCC 61.214 63.158 16.46 16.46 0.00 5.80
900 937 2.204306 CTCCCCTCCCCTGGGTTT 60.204 66.667 12.71 0.00 45.70 3.27
905 942 4.505970 CTCCCCTCCCCTCCCCTG 62.506 77.778 0.00 0.00 0.00 4.45
910 947 4.179599 CTCCCCTCCCCTCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
1875 1954 1.301401 CCACGGCCCATATACGGTG 60.301 63.158 0.00 0.00 37.00 4.94
2037 2116 3.561143 TGTATCCAATGCCCCAATACAC 58.439 45.455 0.00 0.00 30.13 2.90
2319 2398 0.108804 ACTCAAGATACCACCGCACG 60.109 55.000 0.00 0.00 0.00 5.34
2443 2522 1.177401 GGGCCATCCAGAAACTGAAC 58.823 55.000 4.39 0.00 32.44 3.18
2569 2648 4.993905 AGCAACAGTTTTCAACACTAACC 58.006 39.130 0.00 0.00 0.00 2.85
3026 3106 4.436584 GCATCACAGTAGCACTCACAAATC 60.437 45.833 0.00 0.00 0.00 2.17
3030 3110 1.344114 TGCATCACAGTAGCACTCACA 59.656 47.619 0.00 0.00 32.55 3.58
3048 3128 6.575201 CGTTTAATCTGTCTCAGAAAAGTTGC 59.425 38.462 3.58 0.00 44.04 4.17
3076 3156 0.597568 CCAATGACCAAAGAAGCGCA 59.402 50.000 11.47 0.00 0.00 6.09
3077 3157 0.598065 ACCAATGACCAAAGAAGCGC 59.402 50.000 0.00 0.00 0.00 5.92
3089 3169 9.737844 TGCAAATAATATCAGCTATACCAATGA 57.262 29.630 0.00 0.00 0.00 2.57
3094 3174 9.294030 GCAATTGCAAATAATATCAGCTATACC 57.706 33.333 25.36 0.00 41.59 2.73
3119 3199 2.022195 AGATGGACATGAGCACATTGC 58.978 47.619 0.00 0.00 45.46 3.56
3120 3200 2.223502 GCAGATGGACATGAGCACATTG 60.224 50.000 0.00 0.00 34.15 2.82
3121 3201 2.022195 GCAGATGGACATGAGCACATT 58.978 47.619 0.00 0.00 34.15 2.71
3122 3202 1.212195 AGCAGATGGACATGAGCACAT 59.788 47.619 0.00 0.00 37.19 3.21
3123 3203 0.616891 AGCAGATGGACATGAGCACA 59.383 50.000 0.00 0.00 0.00 4.57
3124 3204 1.400846 CAAGCAGATGGACATGAGCAC 59.599 52.381 0.00 0.00 0.00 4.40
3125 3205 1.279846 TCAAGCAGATGGACATGAGCA 59.720 47.619 0.00 0.00 0.00 4.26
3126 3206 2.034104 TCAAGCAGATGGACATGAGC 57.966 50.000 0.00 0.00 0.00 4.26
3127 3207 3.607741 AGTTCAAGCAGATGGACATGAG 58.392 45.455 0.00 0.00 30.72 2.90
3128 3208 3.708403 AGTTCAAGCAGATGGACATGA 57.292 42.857 0.00 0.00 30.72 3.07
3129 3209 4.482386 CAAAGTTCAAGCAGATGGACATG 58.518 43.478 0.00 0.00 30.72 3.21
3130 3210 3.508793 CCAAAGTTCAAGCAGATGGACAT 59.491 43.478 0.00 0.00 30.72 3.06
3131 3211 2.886523 CCAAAGTTCAAGCAGATGGACA 59.113 45.455 0.00 0.00 30.72 4.02
3132 3212 2.887152 ACCAAAGTTCAAGCAGATGGAC 59.113 45.455 0.00 0.00 0.00 4.02
3133 3213 3.149196 GACCAAAGTTCAAGCAGATGGA 58.851 45.455 0.00 0.00 0.00 3.41
3134 3214 2.886523 TGACCAAAGTTCAAGCAGATGG 59.113 45.455 0.00 0.00 0.00 3.51
3135 3215 3.567164 AGTGACCAAAGTTCAAGCAGATG 59.433 43.478 0.00 0.00 0.00 2.90
3136 3216 3.567164 CAGTGACCAAAGTTCAAGCAGAT 59.433 43.478 0.00 0.00 0.00 2.90
3137 3217 2.945008 CAGTGACCAAAGTTCAAGCAGA 59.055 45.455 0.00 0.00 0.00 4.26
3138 3218 2.033801 CCAGTGACCAAAGTTCAAGCAG 59.966 50.000 0.00 0.00 0.00 4.24
3139 3219 2.023673 CCAGTGACCAAAGTTCAAGCA 58.976 47.619 0.00 0.00 0.00 3.91
3140 3220 2.024414 ACCAGTGACCAAAGTTCAAGC 58.976 47.619 0.00 0.00 0.00 4.01
3141 3221 5.122396 GCTATACCAGTGACCAAAGTTCAAG 59.878 44.000 0.00 0.00 0.00 3.02
3142 3222 5.001232 GCTATACCAGTGACCAAAGTTCAA 58.999 41.667 0.00 0.00 0.00 2.69
3143 3223 4.286032 AGCTATACCAGTGACCAAAGTTCA 59.714 41.667 0.00 0.00 0.00 3.18
3144 3224 4.631813 CAGCTATACCAGTGACCAAAGTTC 59.368 45.833 0.00 0.00 0.00 3.01
3145 3225 4.286032 TCAGCTATACCAGTGACCAAAGTT 59.714 41.667 0.00 0.00 0.00 2.66
3146 3226 3.838317 TCAGCTATACCAGTGACCAAAGT 59.162 43.478 0.00 0.00 0.00 2.66
3147 3227 4.471904 TCAGCTATACCAGTGACCAAAG 57.528 45.455 0.00 0.00 0.00 2.77
3148 3228 6.747414 ATATCAGCTATACCAGTGACCAAA 57.253 37.500 0.00 0.00 0.00 3.28
3149 3229 6.747414 AATATCAGCTATACCAGTGACCAA 57.253 37.500 0.00 0.00 0.00 3.67
3150 3230 8.435931 AATAATATCAGCTATACCAGTGACCA 57.564 34.615 0.00 0.00 0.00 4.02
3151 3231 9.155975 CAAATAATATCAGCTATACCAGTGACC 57.844 37.037 0.00 0.00 0.00 4.02
3152 3232 8.660373 GCAAATAATATCAGCTATACCAGTGAC 58.340 37.037 0.00 0.00 0.00 3.67
3185 3265 1.201998 GCAGATGAACATGAGCACGTG 60.202 52.381 12.28 12.28 38.80 4.49
3208 3288 6.409524 TGAGAAAGCCAAATCAGACAATTT 57.590 33.333 0.00 0.00 0.00 1.82
3244 3324 6.817140 ACGCTCTTATAAAAGTTTACAGAGGG 59.183 38.462 22.31 22.31 43.34 4.30
3245 3325 7.829378 ACGCTCTTATAAAAGTTTACAGAGG 57.171 36.000 16.49 11.85 35.69 3.69
3253 3333 9.654663 AGTGATCTAAACGCTCTTATAAAAGTT 57.345 29.630 0.00 0.00 34.13 2.66
3260 3340 9.953697 CTACTTTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 40.05 1.73
3261 3341 8.954350 ACTACTTTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 40.05 2.10
3262 3342 7.828712 ACTACTTTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 40.05 2.85
3263 3343 7.393841 ACTACTTTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 40.05 4.09
3277 3357 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
3278 3358 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
3285 3365 9.601217 AACAAATATAAGAGCGTTTAGATCACT 57.399 29.630 0.00 0.00 37.82 3.41
3293 3373 8.665685 CCTCTGTAAACAAATATAAGAGCGTTT 58.334 33.333 0.00 0.00 0.00 3.60
3294 3374 7.280205 CCCTCTGTAAACAAATATAAGAGCGTT 59.720 37.037 0.00 0.00 0.00 4.84
3295 3375 6.761714 CCCTCTGTAAACAAATATAAGAGCGT 59.238 38.462 0.00 0.00 0.00 5.07
3296 3376 6.984474 TCCCTCTGTAAACAAATATAAGAGCG 59.016 38.462 0.00 0.00 0.00 5.03
3297 3377 7.988028 ACTCCCTCTGTAAACAAATATAAGAGC 59.012 37.037 0.00 0.00 0.00 4.09
3303 3383 9.710818 TCTAGTACTCCCTCTGTAAACAAATAT 57.289 33.333 0.00 0.00 0.00 1.28
3304 3384 9.710818 ATCTAGTACTCCCTCTGTAAACAAATA 57.289 33.333 0.00 0.00 0.00 1.40
3305 3385 8.611051 ATCTAGTACTCCCTCTGTAAACAAAT 57.389 34.615 0.00 0.00 0.00 2.32
3306 3386 7.894364 AGATCTAGTACTCCCTCTGTAAACAAA 59.106 37.037 0.00 0.00 0.00 2.83
3307 3387 7.411808 AGATCTAGTACTCCCTCTGTAAACAA 58.588 38.462 0.00 0.00 0.00 2.83
3308 3388 6.971340 AGATCTAGTACTCCCTCTGTAAACA 58.029 40.000 0.00 0.00 0.00 2.83
3309 3389 9.577222 AATAGATCTAGTACTCCCTCTGTAAAC 57.423 37.037 8.70 0.00 0.00 2.01
3338 3418 9.719355 TCAAAAGTATAAGTAGCATCAGTTCAA 57.281 29.630 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.