Multiple sequence alignment - TraesCS4A01G077700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G077700 chr4A 100.000 9424 0 0 1 9424 76932420 76941843 0.000000e+00 17403.0
1 TraesCS4A01G077700 chr4A 81.383 188 31 3 9231 9416 595418759 595418574 5.900000e-32 150.0
2 TraesCS4A01G077700 chr4D 91.434 3899 212 48 323 4175 395372965 395376787 0.000000e+00 5238.0
3 TraesCS4A01G077700 chr4D 93.935 2539 107 22 4299 6810 395376965 395379483 0.000000e+00 3792.0
4 TraesCS4A01G077700 chr4D 93.826 2300 86 24 7146 9424 395379912 395382176 0.000000e+00 3410.0
5 TraesCS4A01G077700 chr4D 95.395 152 6 1 1 151 395372810 395372961 3.400000e-59 241.0
6 TraesCS4A01G077700 chr4D 80.423 189 31 5 9231 9416 7897617 7897802 1.280000e-28 139.0
7 TraesCS4A01G077700 chr4D 95.238 42 1 1 6843 6883 395379487 395379528 2.200000e-06 65.8
8 TraesCS4A01G077700 chr4B 92.825 3596 149 48 5104 8652 486280065 486283598 0.000000e+00 5110.0
9 TraesCS4A01G077700 chr4B 91.864 3724 203 47 512 4197 486274975 486278636 0.000000e+00 5107.0
10 TraesCS4A01G077700 chr4B 94.005 784 31 10 8651 9424 486283681 486284458 0.000000e+00 1173.0
11 TraesCS4A01G077700 chr4B 95.620 548 22 1 4422 4969 486279148 486279693 0.000000e+00 878.0
12 TraesCS4A01G077700 chr4B 96.403 139 2 1 4968 5106 486279817 486279952 9.520000e-55 226.0
13 TraesCS4A01G077700 chr4B 92.857 154 8 2 1 153 486271811 486271962 4.430000e-53 220.0
14 TraesCS4A01G077700 chr4B 90.909 121 11 0 323 443 486271964 486272084 7.570000e-36 163.0
15 TraesCS4A01G077700 chr4B 82.540 189 27 5 9231 9416 14267367 14267182 2.720000e-35 161.0
16 TraesCS4A01G077700 chr4B 97.297 37 1 0 513 549 486274277 486274313 7.900000e-06 63.9
17 TraesCS4A01G077700 chr5A 86.592 179 12 7 147 324 422444298 422444465 4.490000e-43 187.0
18 TraesCS4A01G077700 chr3B 87.356 174 9 6 156 328 269251993 269252154 4.490000e-43 187.0
19 TraesCS4A01G077700 chr5D 87.059 170 11 8 156 324 26906341 26906500 2.090000e-41 182.0
20 TraesCS4A01G077700 chr5D 89.535 86 9 0 7344 7429 464070948 464070863 1.000000e-19 110.0
21 TraesCS4A01G077700 chr3A 84.916 179 15 7 147 324 452657199 452657032 4.530000e-38 171.0
22 TraesCS4A01G077700 chr3A 84.270 178 18 7 147 324 343808682 343808515 2.110000e-36 165.0
23 TraesCS4A01G077700 chr3A 87.356 87 11 0 7343 7429 151644683 151644769 6.020000e-17 100.0
24 TraesCS4A01G077700 chr3A 75.333 150 23 11 156 301 435805084 435805223 1.020000e-04 60.2
25 TraesCS4A01G077700 chr5B 85.294 170 16 5 158 326 247348145 247347984 5.850000e-37 167.0
26 TraesCS4A01G077700 chr5B 84.795 171 14 8 156 325 407219551 407219392 2.720000e-35 161.0
27 TraesCS4A01G077700 chr5B 83.799 179 18 6 156 333 650159652 650159820 9.800000e-35 159.0
28 TraesCS4A01G077700 chr5B 93.750 96 4 2 677 772 70271996 70272089 9.860000e-30 143.0
29 TraesCS4A01G077700 chr2B 84.444 180 17 6 156 334 512624246 512624077 5.850000e-37 167.0
30 TraesCS4A01G077700 chr2B 90.476 84 8 0 7343 7426 386315318 386315401 2.780000e-20 111.0
31 TraesCS4A01G077700 chr1B 93.750 96 5 1 673 767 38911780 38911875 9.860000e-30 143.0
32 TraesCS4A01G077700 chr1B 93.478 92 5 1 676 766 38906803 38906894 1.650000e-27 135.0
33 TraesCS4A01G077700 chr1A 95.556 90 3 1 676 765 24303434 24303346 9.860000e-30 143.0
34 TraesCS4A01G077700 chr1A 94.505 91 4 1 677 766 23905649 23905559 1.280000e-28 139.0
35 TraesCS4A01G077700 chr1A 93.478 92 6 0 675 766 24130872 24130781 4.590000e-28 137.0
36 TraesCS4A01G077700 chr1A 85.567 97 8 3 7341 7437 501030191 501030281 7.790000e-16 97.1
37 TraesCS4A01G077700 chr1D 98.701 77 1 0 690 766 22888991 22888915 4.590000e-28 137.0
38 TraesCS4A01G077700 chr1D 88.764 89 10 0 7340 7428 279101464 279101376 1.000000e-19 110.0
39 TraesCS4A01G077700 chr2D 76.030 267 29 27 351 596 203522522 203522774 1.290000e-18 106.0
40 TraesCS4A01G077700 chr2D 87.778 90 9 2 7339 7428 425742656 425742569 4.660000e-18 104.0
41 TraesCS4A01G077700 chr7B 83.962 106 11 3 7344 7449 450642116 450642215 7.790000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G077700 chr4A 76932420 76941843 9423 False 17403.0000 17403 100.0000 1 9424 1 chr4A.!!$F1 9423
1 TraesCS4A01G077700 chr4D 395372810 395382176 9366 False 2549.3600 5238 93.9656 1 9424 5 chr4D.!!$F2 9423
2 TraesCS4A01G077700 chr4B 486271811 486284458 12647 False 1617.6125 5110 93.9725 1 9424 8 chr4B.!!$F1 9423

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
880 3726 0.037232 CTCTCCCAACTTCCGTGGTC 60.037 60.0 0.00 0.00 0.00 4.02 F
1622 4476 0.108424 AGAATGTCGCTCCTGCTGAC 60.108 55.0 0.00 0.00 40.44 3.51 F
2045 4907 0.926155 CACATGCAATCTCGAGTCCG 59.074 55.0 13.13 2.89 37.07 4.79 F
3474 6337 1.055338 GCATGAGCTTTGTTCGTTGC 58.945 50.0 0.00 0.00 37.91 4.17 F
4240 7115 0.322098 TTTGTATCTGCACCCGGTGG 60.322 55.0 19.41 3.60 33.64 4.61 F
4390 7542 0.969149 GCTTTGCAGGGTTAGCCTTT 59.031 50.0 0.00 0.00 34.45 3.11 F
5185 8591 0.452987 CCTGCACATTTGTCCGATGG 59.547 55.0 0.00 0.00 0.00 3.51 F
5188 8594 0.887933 GCACATTTGTCCGATGGGTT 59.112 50.0 0.00 0.00 30.54 4.11 F
6947 10381 0.036671 CCCCCGAGTCTACAACAACC 60.037 60.0 0.00 0.00 0.00 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1875 4729 1.265365 GCCAGAACAAGTGCTGACTTC 59.735 52.381 9.80 0.00 40.68 3.01 R
3304 6167 2.064762 CTGCAGAGAAAACTCGACAGG 58.935 52.381 8.42 0.00 31.85 4.00 R
4029 6903 0.670854 GGTGAACTTGGAGAGGACGC 60.671 60.000 0.00 0.00 0.00 5.19 R
4546 7710 0.174845 CTTTGGATGGCATGGCAGTG 59.825 55.000 27.02 9.35 0.00 3.66 R
5183 8589 2.969262 TCTGTCATGTGTACTGAACCCA 59.031 45.455 0.00 0.00 0.00 4.51 R
5734 9147 4.160642 ACCAATAGCATCATCAGCTTCA 57.839 40.909 0.00 0.00 43.25 3.02 R
6773 10207 1.146263 GACTCCAATGTAGGGGGCG 59.854 63.158 0.00 0.00 31.56 6.13 R
7142 10583 1.308047 GCATGGTCTTGTGTGTGTGA 58.692 50.000 0.00 0.00 0.00 3.58 R
8488 12060 0.865769 ACGATCGTGCTGTTTTGGTC 59.134 50.000 22.06 0.00 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 65 6.421801 GCACAGTTAATTTCTGAGCATGTTTT 59.578 34.615 19.31 0.00 44.49 2.43
153 156 5.616270 TCTGCTAGTCGAATCTCTCACTAT 58.384 41.667 0.00 0.00 0.00 2.12
154 157 6.058833 TCTGCTAGTCGAATCTCTCACTATT 58.941 40.000 0.00 0.00 0.00 1.73
155 158 6.544197 TCTGCTAGTCGAATCTCTCACTATTT 59.456 38.462 0.00 0.00 0.00 1.40
156 159 6.730175 TGCTAGTCGAATCTCTCACTATTTC 58.270 40.000 0.00 0.00 0.00 2.17
157 160 6.146898 GCTAGTCGAATCTCTCACTATTTCC 58.853 44.000 0.00 0.00 0.00 3.13
158 161 5.523438 AGTCGAATCTCTCACTATTTCCC 57.477 43.478 0.00 0.00 0.00 3.97
159 162 5.205056 AGTCGAATCTCTCACTATTTCCCT 58.795 41.667 0.00 0.00 0.00 4.20
160 163 5.300792 AGTCGAATCTCTCACTATTTCCCTC 59.699 44.000 0.00 0.00 0.00 4.30
161 164 5.300792 GTCGAATCTCTCACTATTTCCCTCT 59.699 44.000 0.00 0.00 0.00 3.69
162 165 5.300539 TCGAATCTCTCACTATTTCCCTCTG 59.699 44.000 0.00 0.00 0.00 3.35
163 166 5.068460 CGAATCTCTCACTATTTCCCTCTGT 59.932 44.000 0.00 0.00 0.00 3.41
164 167 6.406400 CGAATCTCTCACTATTTCCCTCTGTT 60.406 42.308 0.00 0.00 0.00 3.16
165 168 6.882768 ATCTCTCACTATTTCCCTCTGTTT 57.117 37.500 0.00 0.00 0.00 2.83
166 169 6.287589 TCTCTCACTATTTCCCTCTGTTTC 57.712 41.667 0.00 0.00 0.00 2.78
167 170 6.019748 TCTCTCACTATTTCCCTCTGTTTCT 58.980 40.000 0.00 0.00 0.00 2.52
168 171 7.182760 TCTCTCACTATTTCCCTCTGTTTCTA 58.817 38.462 0.00 0.00 0.00 2.10
169 172 7.674348 TCTCTCACTATTTCCCTCTGTTTCTAA 59.326 37.037 0.00 0.00 0.00 2.10
170 173 8.202461 TCTCACTATTTCCCTCTGTTTCTAAA 57.798 34.615 0.00 0.00 0.00 1.85
171 174 8.826765 TCTCACTATTTCCCTCTGTTTCTAAAT 58.173 33.333 0.00 0.00 0.00 1.40
173 176 9.886132 TCACTATTTCCCTCTGTTTCTAAATAC 57.114 33.333 0.00 0.00 0.00 1.89
174 177 9.667107 CACTATTTCCCTCTGTTTCTAAATACA 57.333 33.333 0.00 0.00 0.00 2.29
178 181 8.617290 TTTCCCTCTGTTTCTAAATACAAGTC 57.383 34.615 0.00 0.00 0.00 3.01
179 182 7.554959 TCCCTCTGTTTCTAAATACAAGTCT 57.445 36.000 0.00 0.00 0.00 3.24
180 183 7.974504 TCCCTCTGTTTCTAAATACAAGTCTT 58.025 34.615 0.00 0.00 0.00 3.01
181 184 8.437575 TCCCTCTGTTTCTAAATACAAGTCTTT 58.562 33.333 0.00 0.00 0.00 2.52
182 185 9.067986 CCCTCTGTTTCTAAATACAAGTCTTTT 57.932 33.333 0.00 0.00 0.00 2.27
218 221 8.780846 AGACTATTCATAGACTACATACGGAG 57.219 38.462 0.63 0.00 34.49 4.63
219 222 7.334921 AGACTATTCATAGACTACATACGGAGC 59.665 40.741 0.63 0.00 34.49 4.70
220 223 6.940867 ACTATTCATAGACTACATACGGAGCA 59.059 38.462 0.63 0.00 34.50 4.26
221 224 6.650427 ATTCATAGACTACATACGGAGCAA 57.350 37.500 0.00 0.00 0.00 3.91
222 225 6.459670 TTCATAGACTACATACGGAGCAAA 57.540 37.500 0.00 0.00 0.00 3.68
223 226 6.459670 TCATAGACTACATACGGAGCAAAA 57.540 37.500 0.00 0.00 0.00 2.44
224 227 7.050970 TCATAGACTACATACGGAGCAAAAT 57.949 36.000 0.00 0.00 0.00 1.82
225 228 6.923508 TCATAGACTACATACGGAGCAAAATG 59.076 38.462 0.00 0.00 0.00 2.32
226 229 5.339008 AGACTACATACGGAGCAAAATGA 57.661 39.130 0.00 0.00 0.00 2.57
227 230 5.730550 AGACTACATACGGAGCAAAATGAA 58.269 37.500 0.00 0.00 0.00 2.57
228 231 6.349300 AGACTACATACGGAGCAAAATGAAT 58.651 36.000 0.00 0.00 0.00 2.57
229 232 7.497595 AGACTACATACGGAGCAAAATGAATA 58.502 34.615 0.00 0.00 0.00 1.75
230 233 7.985184 AGACTACATACGGAGCAAAATGAATAA 59.015 33.333 0.00 0.00 0.00 1.40
231 234 8.500753 ACTACATACGGAGCAAAATGAATAAA 57.499 30.769 0.00 0.00 0.00 1.40
232 235 9.120538 ACTACATACGGAGCAAAATGAATAAAT 57.879 29.630 0.00 0.00 0.00 1.40
233 236 9.599322 CTACATACGGAGCAAAATGAATAAATC 57.401 33.333 0.00 0.00 0.00 2.17
234 237 8.225603 ACATACGGAGCAAAATGAATAAATCT 57.774 30.769 0.00 0.00 0.00 2.40
235 238 9.337396 ACATACGGAGCAAAATGAATAAATCTA 57.663 29.630 0.00 0.00 0.00 1.98
236 239 9.599322 CATACGGAGCAAAATGAATAAATCTAC 57.401 33.333 0.00 0.00 0.00 2.59
237 240 7.624360 ACGGAGCAAAATGAATAAATCTACA 57.376 32.000 0.00 0.00 0.00 2.74
238 241 7.472543 ACGGAGCAAAATGAATAAATCTACAC 58.527 34.615 0.00 0.00 0.00 2.90
239 242 7.336931 ACGGAGCAAAATGAATAAATCTACACT 59.663 33.333 0.00 0.00 0.00 3.55
240 243 7.852945 CGGAGCAAAATGAATAAATCTACACTC 59.147 37.037 0.00 0.00 0.00 3.51
241 244 8.897752 GGAGCAAAATGAATAAATCTACACTCT 58.102 33.333 0.00 0.00 0.00 3.24
263 266 9.149225 ACTCTAAACTACGTCTATATACATCCG 57.851 37.037 0.00 0.00 0.00 4.18
264 267 9.149225 CTCTAAACTACGTCTATATACATCCGT 57.851 37.037 0.00 0.00 0.00 4.69
280 283 6.911250 ACATCCGTATGTAGTCCATATTGA 57.089 37.500 0.00 0.00 44.66 2.57
281 284 7.297936 ACATCCGTATGTAGTCCATATTGAA 57.702 36.000 0.00 0.00 44.66 2.69
282 285 7.907389 ACATCCGTATGTAGTCCATATTGAAT 58.093 34.615 0.00 0.00 44.66 2.57
283 286 8.375506 ACATCCGTATGTAGTCCATATTGAATT 58.624 33.333 0.00 0.00 44.66 2.17
284 287 8.873830 CATCCGTATGTAGTCCATATTGAATTC 58.126 37.037 0.00 0.00 38.29 2.17
285 288 8.190326 TCCGTATGTAGTCCATATTGAATTCT 57.810 34.615 7.05 0.00 38.29 2.40
286 289 8.088365 TCCGTATGTAGTCCATATTGAATTCTG 58.912 37.037 7.05 0.00 38.29 3.02
287 290 7.872993 CCGTATGTAGTCCATATTGAATTCTGT 59.127 37.037 7.05 0.00 38.29 3.41
288 291 9.908152 CGTATGTAGTCCATATTGAATTCTGTA 57.092 33.333 7.05 0.15 38.29 2.74
295 298 9.606631 AGTCCATATTGAATTCTGTAGAAAGAC 57.393 33.333 7.05 4.83 37.61 3.01
296 299 9.606631 GTCCATATTGAATTCTGTAGAAAGACT 57.393 33.333 7.05 0.00 37.61 3.24
318 321 8.804204 AGACTTGTATATATTTAGGAACGGAGG 58.196 37.037 0.00 0.00 0.00 4.30
319 322 7.904205 ACTTGTATATATTTAGGAACGGAGGG 58.096 38.462 0.00 0.00 0.00 4.30
320 323 7.731688 ACTTGTATATATTTAGGAACGGAGGGA 59.268 37.037 0.00 0.00 0.00 4.20
321 324 7.713734 TGTATATATTTAGGAACGGAGGGAG 57.286 40.000 0.00 0.00 0.00 4.30
335 338 3.477530 GGAGGGAGTATACACAAATGCC 58.522 50.000 5.50 0.00 0.00 4.40
349 352 3.780357 TGCCATGCATGCTTGTGT 58.220 50.000 26.41 3.98 31.71 3.72
399 402 3.904717 TGGAGCCTTTACTTTGGAAACA 58.095 40.909 0.00 0.00 39.83 2.83
472 2570 8.380099 TGGATGTACATTACTCTGTAAAGGTTT 58.620 33.333 10.30 0.00 33.59 3.27
473 2571 8.880750 GGATGTACATTACTCTGTAAAGGTTTC 58.119 37.037 10.30 0.00 33.59 2.78
474 2572 9.431887 GATGTACATTACTCTGTAAAGGTTTCA 57.568 33.333 10.30 0.00 33.59 2.69
475 2573 9.959721 ATGTACATTACTCTGTAAAGGTTTCAT 57.040 29.630 1.41 0.00 33.59 2.57
477 2575 7.687941 ACATTACTCTGTAAAGGTTTCATGG 57.312 36.000 0.00 0.00 0.00 3.66
478 2576 6.151144 ACATTACTCTGTAAAGGTTTCATGGC 59.849 38.462 0.00 0.00 0.00 4.40
479 2577 3.074412 ACTCTGTAAAGGTTTCATGGCG 58.926 45.455 0.00 0.00 0.00 5.69
486 3284 5.473846 TGTAAAGGTTTCATGGCGAAATACA 59.526 36.000 0.00 0.00 45.21 2.29
497 3295 6.696583 TCATGGCGAAATACATTTTTATGCTG 59.303 34.615 0.00 0.00 0.00 4.41
499 3297 5.126222 TGGCGAAATACATTTTTATGCTGGA 59.874 36.000 0.00 0.00 0.00 3.86
501 3299 6.533367 GGCGAAATACATTTTTATGCTGGAAA 59.467 34.615 0.00 0.00 0.00 3.13
502 3300 7.254084 GGCGAAATACATTTTTATGCTGGAAAG 60.254 37.037 0.00 0.00 0.00 2.62
504 3302 9.781834 CGAAATACATTTTTATGCTGGAAAGTA 57.218 29.630 0.00 0.00 0.00 2.24
509 3307 8.121305 ACATTTTTATGCTGGAAAGTACATGA 57.879 30.769 0.00 0.00 0.00 3.07
577 3421 6.739112 TCACACACATCTAGTATGCATCTAC 58.261 40.000 0.19 0.00 0.00 2.59
779 3625 9.840427 AATGGATTTGTGAAAATAAGTACTTCG 57.160 29.630 12.39 0.00 0.00 3.79
785 3631 8.891671 TTGTGAAAATAAGTACTTCGTTACCT 57.108 30.769 12.39 0.00 0.00 3.08
836 3682 0.463833 CAAGCCTATTCCCACGGTCC 60.464 60.000 0.00 0.00 0.00 4.46
838 3684 1.049289 AGCCTATTCCCACGGTCCTC 61.049 60.000 0.00 0.00 0.00 3.71
880 3726 0.037232 CTCTCCCAACTTCCGTGGTC 60.037 60.000 0.00 0.00 0.00 4.02
1094 3941 4.856607 GCTCGCCGTCTCCCGAAG 62.857 72.222 0.00 0.00 39.56 3.79
1108 3955 3.773117 CGAAGGGTACGTACGTGTT 57.227 52.632 30.25 17.24 0.00 3.32
1109 3956 1.606606 CGAAGGGTACGTACGTGTTC 58.393 55.000 30.25 22.53 0.00 3.18
1110 3957 1.197721 CGAAGGGTACGTACGTGTTCT 59.802 52.381 30.25 19.61 0.00 3.01
1111 3958 2.589014 GAAGGGTACGTACGTGTTCTG 58.411 52.381 30.25 0.00 0.00 3.02
1112 3959 0.242017 AGGGTACGTACGTGTTCTGC 59.758 55.000 30.25 12.51 0.00 4.26
1113 3960 1.067199 GGGTACGTACGTGTTCTGCG 61.067 60.000 30.25 0.00 0.00 5.18
1114 3961 1.668253 GGTACGTACGTGTTCTGCGC 61.668 60.000 30.25 0.00 0.00 6.09
1138 3985 1.592400 CTTCTCTGGTACCCGACGCA 61.592 60.000 10.07 0.00 0.00 5.24
1144 3991 2.643232 GGTACCCGACGCACTCCTT 61.643 63.158 0.00 0.00 0.00 3.36
1156 4003 0.600255 CACTCCTTCTCGCACGGTTT 60.600 55.000 0.00 0.00 0.00 3.27
1158 4005 1.291877 CTCCTTCTCGCACGGTTTGG 61.292 60.000 0.00 0.00 0.00 3.28
1169 4016 1.606313 CGGTTTGGCAGATTGGGGT 60.606 57.895 0.00 0.00 0.00 4.95
1180 4027 1.544917 ATTGGGGTTGGAGAGGGCT 60.545 57.895 0.00 0.00 0.00 5.19
1181 4028 1.149133 ATTGGGGTTGGAGAGGGCTT 61.149 55.000 0.00 0.00 0.00 4.35
1212 4065 5.488561 AGAAAAATAGGGGAATGCCACATTT 59.511 36.000 0.00 0.00 41.39 2.32
1214 4067 6.882768 AAAATAGGGGAATGCCACATTTAA 57.117 33.333 0.00 0.00 41.39 1.52
1216 4069 7.450323 AAATAGGGGAATGCCACATTTAATT 57.550 32.000 0.00 0.00 41.39 1.40
1217 4070 8.560124 AAATAGGGGAATGCCACATTTAATTA 57.440 30.769 0.00 0.00 41.39 1.40
1218 4071 7.781324 ATAGGGGAATGCCACATTTAATTAG 57.219 36.000 0.00 0.00 41.39 1.73
1221 4074 4.503123 GGGAATGCCACATTTAATTAGCCC 60.503 45.833 0.00 0.00 35.15 5.19
1222 4075 4.344968 GGAATGCCACATTTAATTAGCCCT 59.655 41.667 0.00 0.00 0.00 5.19
1223 4076 5.538433 GGAATGCCACATTTAATTAGCCCTA 59.462 40.000 0.00 0.00 0.00 3.53
1224 4077 6.294731 GGAATGCCACATTTAATTAGCCCTAG 60.295 42.308 0.00 0.00 0.00 3.02
1225 4078 5.124036 TGCCACATTTAATTAGCCCTAGT 57.876 39.130 0.00 0.00 0.00 2.57
1226 4079 6.255294 TGCCACATTTAATTAGCCCTAGTA 57.745 37.500 0.00 0.00 0.00 1.82
1261 4114 1.468520 CTTCGGCGAACATTCCATTGT 59.531 47.619 19.83 0.00 0.00 2.71
1360 4213 1.165270 CGGCTCAACCCTTTTTCGAT 58.835 50.000 0.00 0.00 33.26 3.59
1387 4240 8.805175 TCAAAATGATAGTGATTCATGTGGTTT 58.195 29.630 0.00 0.00 34.14 3.27
1418 4272 6.436843 ACCCTTAATGTTTTCTATTGCGAG 57.563 37.500 0.00 0.00 0.00 5.03
1421 4275 7.773690 ACCCTTAATGTTTTCTATTGCGAGTAT 59.226 33.333 0.00 0.00 0.00 2.12
1422 4276 8.621286 CCCTTAATGTTTTCTATTGCGAGTATT 58.379 33.333 0.00 0.00 0.00 1.89
1454 4308 4.755123 ACTGGTCCTATTTTGTCTTTGACG 59.245 41.667 0.00 0.00 34.95 4.35
1457 4311 4.464112 GTCCTATTTTGTCTTTGACGCAC 58.536 43.478 0.00 0.00 34.95 5.34
1482 4336 1.827399 TTTCTCGGGGCAGTCAGTCC 61.827 60.000 0.00 0.00 43.09 3.85
1499 4353 0.247460 TCCTGCCAGTCACTGATTCG 59.753 55.000 6.30 0.00 32.44 3.34
1500 4354 0.247460 CCTGCCAGTCACTGATTCGA 59.753 55.000 6.30 0.00 32.44 3.71
1520 4374 3.614150 CGATCGAGAGTTTTCAAGGACCA 60.614 47.826 10.26 0.00 0.00 4.02
1622 4476 0.108424 AGAATGTCGCTCCTGCTGAC 60.108 55.000 0.00 0.00 40.44 3.51
1717 4571 1.003866 GTGTTTTCCTCGTGCACTCAC 60.004 52.381 16.19 7.26 39.78 3.51
1787 4641 6.681777 ACGGTAAGTTTATGTCTAGAAACGT 58.318 36.000 0.00 0.00 41.59 3.99
1817 4671 3.244215 TGACAGTCACCTCTTTGTGATCC 60.244 47.826 0.00 0.00 46.20 3.36
1818 4672 2.975489 ACAGTCACCTCTTTGTGATCCT 59.025 45.455 0.00 0.00 46.20 3.24
1819 4673 3.007398 ACAGTCACCTCTTTGTGATCCTC 59.993 47.826 0.00 0.00 46.20 3.71
1820 4674 3.007290 CAGTCACCTCTTTGTGATCCTCA 59.993 47.826 0.00 0.00 46.20 3.86
1821 4675 3.843027 AGTCACCTCTTTGTGATCCTCAT 59.157 43.478 0.00 0.00 46.20 2.90
1822 4676 4.288105 AGTCACCTCTTTGTGATCCTCATT 59.712 41.667 0.00 0.00 46.20 2.57
1823 4677 4.633565 GTCACCTCTTTGTGATCCTCATTC 59.366 45.833 0.00 0.00 46.20 2.67
1875 4729 7.040755 TGGTAAGTTGTCTTGGAACATGTATTG 60.041 37.037 0.00 0.00 39.30 1.90
2002 4856 3.021695 TGTCGTTATCCTAGACACTGGG 58.978 50.000 0.00 0.00 39.63 4.45
2045 4907 0.926155 CACATGCAATCTCGAGTCCG 59.074 55.000 13.13 2.89 37.07 4.79
2160 5022 7.757526 TGTATTGTTTATCCTGTAATGTGCAC 58.242 34.615 10.75 10.75 0.00 4.57
2161 5023 6.832520 ATTGTTTATCCTGTAATGTGCACA 57.167 33.333 24.08 24.08 0.00 4.57
2162 5024 6.832520 TTGTTTATCCTGTAATGTGCACAT 57.167 33.333 26.61 26.61 38.41 3.21
2163 5025 6.435430 TGTTTATCCTGTAATGTGCACATC 57.565 37.500 31.45 20.45 35.10 3.06
2164 5026 5.356751 TGTTTATCCTGTAATGTGCACATCC 59.643 40.000 31.45 23.78 35.10 3.51
2165 5027 3.650281 ATCCTGTAATGTGCACATCCA 57.350 42.857 31.45 26.56 35.10 3.41
2166 5028 3.650281 TCCTGTAATGTGCACATCCAT 57.350 42.857 31.45 19.07 35.10 3.41
2167 5029 3.966979 TCCTGTAATGTGCACATCCATT 58.033 40.909 31.45 19.38 35.10 3.16
2211 5073 3.124578 TGAACTGTGTGCTATGCTTGA 57.875 42.857 0.00 0.00 0.00 3.02
2219 5081 4.520111 TGTGTGCTATGCTTGAACAGAAAT 59.480 37.500 0.00 0.00 0.00 2.17
2235 5097 5.892348 ACAGAAATTCCTAACCAATGTCCT 58.108 37.500 0.00 0.00 0.00 3.85
2360 5222 7.014326 ACCTGTTTGAGAAATTTACTCTTTCCC 59.986 37.037 14.59 0.00 33.93 3.97
2411 5273 7.872113 ACACCTCATCTATTCTTTTTCCATC 57.128 36.000 0.00 0.00 0.00 3.51
2511 5373 2.894126 CTGTCACTGGTGAGTAGGACTT 59.106 50.000 3.47 0.00 40.75 3.01
2512 5374 4.079970 CTGTCACTGGTGAGTAGGACTTA 58.920 47.826 3.47 0.00 40.75 2.24
2513 5375 4.476297 TGTCACTGGTGAGTAGGACTTAA 58.524 43.478 3.47 0.00 40.75 1.85
2514 5376 5.084519 TGTCACTGGTGAGTAGGACTTAAT 58.915 41.667 3.47 0.00 40.75 1.40
2515 5377 5.047306 TGTCACTGGTGAGTAGGACTTAATG 60.047 44.000 3.47 0.00 40.75 1.90
2516 5378 5.185249 GTCACTGGTGAGTAGGACTTAATGA 59.815 44.000 3.47 0.00 40.75 2.57
2517 5379 5.778241 TCACTGGTGAGTAGGACTTAATGAA 59.222 40.000 0.00 0.00 34.14 2.57
2548 5410 5.382618 AGCTTTGAAATGACATCCTCAAC 57.617 39.130 10.83 3.83 30.60 3.18
2549 5411 4.828939 AGCTTTGAAATGACATCCTCAACA 59.171 37.500 10.83 4.74 30.60 3.33
2598 5460 2.890945 GGTCTTGCAGTTATGGGTTGTT 59.109 45.455 0.00 0.00 0.00 2.83
2621 5483 5.651172 TCATGTAGAGTTTGTGTGAAACG 57.349 39.130 0.00 0.00 42.39 3.60
2687 5549 3.454375 GTGTAGTGAATACGGTCCATGG 58.546 50.000 4.97 4.97 37.17 3.66
2764 5626 1.271926 CCAACAAGTAGGAACCAGGGG 60.272 57.143 0.00 0.00 0.00 4.79
2805 5667 4.503714 AGGTCAGGAAAGTTGAGAAACA 57.496 40.909 0.00 0.00 0.00 2.83
2992 5855 4.844655 ACCATTAAGGCGGATCTTATAGGT 59.155 41.667 0.00 0.00 43.14 3.08
2993 5856 5.046520 ACCATTAAGGCGGATCTTATAGGTC 60.047 44.000 0.00 0.00 43.14 3.85
2994 5857 5.046591 CCATTAAGGCGGATCTTATAGGTCA 60.047 44.000 0.00 0.00 0.00 4.02
3057 5920 9.778993 CCTATTTCAGAGTTGTGATGTTTATTG 57.221 33.333 0.00 0.00 0.00 1.90
3097 5960 5.163395 CCTCAGTTGGTATTAGTCCCTTCTC 60.163 48.000 0.00 0.00 0.00 2.87
3098 5961 5.338632 TCAGTTGGTATTAGTCCCTTCTCA 58.661 41.667 0.00 0.00 0.00 3.27
3154 6017 7.373493 ACTGTGGCTTTGAAGAAAATATTCAG 58.627 34.615 0.00 0.00 37.91 3.02
3207 6070 1.260544 ACCTTTTGCCTCCATGCTTC 58.739 50.000 0.00 0.00 0.00 3.86
3304 6167 5.457140 TGATCCTTTGTTGCGATTTGTAAC 58.543 37.500 0.00 0.00 42.79 2.50
3351 6214 2.224769 TGACATGTTGGAGTTCCTTCCC 60.225 50.000 0.00 0.00 36.35 3.97
3417 6280 6.758254 ACTGGCAGTGCTTATTTATTTTTGT 58.242 32.000 21.37 0.00 0.00 2.83
3470 6333 5.912360 TCTATATGCATGAGCTTTGTTCG 57.088 39.130 10.16 0.00 42.74 3.95
3474 6337 1.055338 GCATGAGCTTTGTTCGTTGC 58.945 50.000 0.00 0.00 37.91 4.17
3494 6357 8.508062 TCGTTGCTAACTGCTTATCAATTTAAA 58.492 29.630 0.00 0.00 43.37 1.52
3498 6361 8.249638 TGCTAACTGCTTATCAATTTAAATGCA 58.750 29.630 0.39 5.09 43.37 3.96
3570 6433 2.557869 AGGGGCCAACTGTAGATAACA 58.442 47.619 4.39 0.00 36.42 2.41
3634 6497 7.765819 GCCTTTAATAATCATTTGGCACTTTCT 59.234 33.333 0.00 0.00 35.59 2.52
3684 6547 9.936759 TGTGATACATCATTACAGAAACTACAA 57.063 29.630 0.00 0.00 39.30 2.41
3690 6553 9.897744 ACATCATTACAGAAACTACAATTTGTG 57.102 29.630 12.30 5.10 38.47 3.33
3691 6554 9.897744 CATCATTACAGAAACTACAATTTGTGT 57.102 29.630 12.30 6.33 45.19 3.72
3762 6632 6.966021 TGACCACTTATGTTGCTTTAAACTC 58.034 36.000 0.00 0.00 0.00 3.01
3800 6670 1.227764 CCATGATGGTGAGCTCCGG 60.228 63.158 12.15 0.00 31.35 5.14
3813 6683 2.203938 TCCGGGCCTGTCTCCTTT 60.204 61.111 11.58 0.00 0.00 3.11
3901 6775 4.976224 TCATTCTTGAATGCACATCCAG 57.024 40.909 16.09 0.00 0.00 3.86
3912 6786 9.571816 TTGAATGCACATCCAGTTCATATAATA 57.428 29.630 0.00 0.00 32.77 0.98
3937 6811 8.836268 ATCAATTTGCATAGTTTTCAACACAT 57.164 26.923 0.00 0.00 0.00 3.21
4076 6950 2.628657 GACATGTAGCGTTCTCCCCTAT 59.371 50.000 0.00 0.00 0.00 2.57
4133 7008 9.621629 TTCTCTGGTTTATTCTTTTAGTTGTCA 57.378 29.630 0.00 0.00 0.00 3.58
4197 7072 3.002791 GCGATCCATCTTGTTCTGTTGA 58.997 45.455 0.00 0.00 0.00 3.18
4198 7073 3.436704 GCGATCCATCTTGTTCTGTTGAA 59.563 43.478 0.00 0.00 0.00 2.69
4199 7074 4.083324 GCGATCCATCTTGTTCTGTTGAAA 60.083 41.667 0.00 0.00 33.52 2.69
4200 7075 5.392380 GCGATCCATCTTGTTCTGTTGAAAT 60.392 40.000 0.00 0.00 33.52 2.17
4201 7076 6.183360 GCGATCCATCTTGTTCTGTTGAAATA 60.183 38.462 0.00 0.00 33.52 1.40
4202 7077 7.467811 GCGATCCATCTTGTTCTGTTGAAATAT 60.468 37.037 0.00 0.00 33.52 1.28
4203 7078 9.045223 CGATCCATCTTGTTCTGTTGAAATATA 57.955 33.333 0.00 0.00 33.52 0.86
4232 7107 9.734984 ATGATCTATGAATGATTTGTATCTGCA 57.265 29.630 0.00 0.00 0.00 4.41
4233 7108 8.996271 TGATCTATGAATGATTTGTATCTGCAC 58.004 33.333 0.00 0.00 0.00 4.57
4234 7109 7.734924 TCTATGAATGATTTGTATCTGCACC 57.265 36.000 0.00 0.00 0.00 5.01
4235 7110 5.779529 ATGAATGATTTGTATCTGCACCC 57.220 39.130 0.00 0.00 0.00 4.61
4236 7111 3.627123 TGAATGATTTGTATCTGCACCCG 59.373 43.478 0.00 0.00 0.00 5.28
4237 7112 2.036958 TGATTTGTATCTGCACCCGG 57.963 50.000 0.00 0.00 0.00 5.73
4238 7113 1.280710 TGATTTGTATCTGCACCCGGT 59.719 47.619 0.00 0.00 0.00 5.28
4239 7114 1.670811 GATTTGTATCTGCACCCGGTG 59.329 52.381 13.71 13.71 36.51 4.94
4240 7115 0.322098 TTTGTATCTGCACCCGGTGG 60.322 55.000 19.41 3.60 33.64 4.61
4299 7214 6.978024 CAATGGTGCAAATTCAAACAAATG 57.022 33.333 0.00 0.00 0.00 2.32
4303 7218 7.244166 TGGTGCAAATTCAAACAAATGTTAG 57.756 32.000 0.00 0.00 37.25 2.34
4308 7237 8.494347 TGCAAATTCAAACAAATGTTAGCATAC 58.506 29.630 0.00 0.00 37.25 2.39
4315 7244 8.503196 TCAAACAAATGTTAGCATACTAGTGTG 58.497 33.333 14.80 14.80 37.25 3.82
4333 7262 6.903883 AGTGTGTGTAACTCAACTTAACAG 57.096 37.500 0.00 0.00 42.52 3.16
4341 7270 7.280652 GTGTAACTCAACTTAACAGGTTTGGTA 59.719 37.037 0.00 0.00 0.00 3.25
4386 7538 2.877691 CGGCTTTGCAGGGTTAGC 59.122 61.111 0.00 0.00 0.00 3.09
4390 7542 0.969149 GCTTTGCAGGGTTAGCCTTT 59.031 50.000 0.00 0.00 34.45 3.11
4411 7563 7.664758 CCTTTTCTGTTTGGATTTCTTCATCT 58.335 34.615 0.00 0.00 0.00 2.90
4542 7706 1.704641 TCAGGAGTCCCATATGGTCG 58.295 55.000 20.46 6.34 34.77 4.79
4546 7710 2.963782 AGGAGTCCCATATGGTCGTTAC 59.036 50.000 20.46 9.96 34.77 2.50
4549 7713 3.371965 AGTCCCATATGGTCGTTACACT 58.628 45.455 20.46 7.37 34.77 3.55
4591 7755 3.191371 GTCACATGGCAAAAGGTAAGAGG 59.809 47.826 0.00 0.00 0.00 3.69
4684 7850 4.404073 TCTCACTTTCTAGGCAGATCCTTC 59.596 45.833 0.00 0.00 44.75 3.46
4719 7885 4.381292 GGCAAAAGATGGTCTGGATCAAAG 60.381 45.833 0.00 0.00 0.00 2.77
4905 8071 4.462483 TCCATAGGAAGCACCATTTTGTTC 59.538 41.667 2.96 0.00 42.04 3.18
4947 8113 7.495606 CCAAAATTACTATGGATTTGCTTTCCC 59.504 37.037 0.00 0.00 36.27 3.97
5081 8372 6.586082 GTGCCACCAAACAACTTCTATTATTG 59.414 38.462 0.00 0.00 0.00 1.90
5183 8589 2.425143 ATCCTGCACATTTGTCCGAT 57.575 45.000 0.00 0.00 0.00 4.18
5185 8591 0.452987 CCTGCACATTTGTCCGATGG 59.547 55.000 0.00 0.00 0.00 3.51
5188 8594 0.887933 GCACATTTGTCCGATGGGTT 59.112 50.000 0.00 0.00 30.54 4.11
5219 8625 7.984050 ACACATGACAGAACCTCATTTCTATAG 59.016 37.037 0.00 0.00 33.89 1.31
5344 8751 9.399403 GAAACAATTCAACTCTAGTCCATTTTC 57.601 33.333 0.00 0.00 35.54 2.29
5345 8752 7.454260 ACAATTCAACTCTAGTCCATTTTCC 57.546 36.000 0.00 0.00 0.00 3.13
5346 8753 6.434340 ACAATTCAACTCTAGTCCATTTTCCC 59.566 38.462 0.00 0.00 0.00 3.97
5402 8809 7.464358 AGCTCTGCATTTATTAAAGTAACACG 58.536 34.615 0.00 0.00 0.00 4.49
5456 8869 9.547753 TGTTCTTAGCAGTTATCTCCAATATTC 57.452 33.333 0.00 0.00 0.00 1.75
5460 8873 9.995003 CTTAGCAGTTATCTCCAATATTCTCTT 57.005 33.333 0.00 0.00 0.00 2.85
5463 8876 9.373450 AGCAGTTATCTCCAATATTCTCTTCTA 57.627 33.333 0.00 0.00 0.00 2.10
5672 9085 6.924111 AGCAGTTGTATATTTGGTTTGAAGG 58.076 36.000 0.00 0.00 0.00 3.46
5734 9147 4.657814 ATCAATGTAGGTTCCAGGTGTT 57.342 40.909 0.00 0.00 0.00 3.32
5900 9314 7.543359 TTTTTGGATCATTGACTGGATTTCT 57.457 32.000 0.00 0.00 0.00 2.52
5987 9401 1.490490 TGGCTGGAGTTAAGGGCTATG 59.510 52.381 0.00 0.00 0.00 2.23
5989 9403 2.565841 GCTGGAGTTAAGGGCTATGTG 58.434 52.381 0.00 0.00 0.00 3.21
6014 9428 5.010617 AGCATTTCTTGGTTTTTGTACCGAT 59.989 36.000 0.00 0.00 41.28 4.18
6080 9497 7.816995 GCTAAAGTCTGATGGATTCGATATCTT 59.183 37.037 0.34 0.00 0.00 2.40
6081 9498 9.352784 CTAAAGTCTGATGGATTCGATATCTTC 57.647 37.037 0.34 0.00 0.00 2.87
6082 9499 7.537596 AAGTCTGATGGATTCGATATCTTCT 57.462 36.000 0.34 0.00 0.00 2.85
6163 9580 1.410004 TGAAGGTCCGTGTTGTCTCT 58.590 50.000 0.00 0.00 0.00 3.10
6286 9703 6.619801 AAGTGTCACTGGAAATGTCTAAAC 57.380 37.500 6.18 0.00 0.00 2.01
6369 9786 6.040391 TGGTTTCATTTGGAGTCGAAGATTTT 59.960 34.615 0.00 0.00 40.67 1.82
6468 9885 2.552315 ACCAGGTATTGTTTCTGTTGCG 59.448 45.455 0.00 0.00 0.00 4.85
6479 9896 5.057819 TGTTTCTGTTGCGGTTGTATCTTA 58.942 37.500 0.00 0.00 0.00 2.10
6508 9925 7.418025 CCATTTTAGTTAGGGGTCAACAAAACA 60.418 37.037 0.00 0.00 0.00 2.83
6541 9973 3.699038 GCCAGCCCAACTGTATATGAAAA 59.301 43.478 0.00 0.00 45.68 2.29
6699 10133 1.527433 GGGTGAGGTGGCTGCTTTTC 61.527 60.000 0.00 0.00 0.00 2.29
6750 10184 1.001974 TGATGTTGTCACCCTTCTCCG 59.998 52.381 0.00 0.00 0.00 4.63
6773 10207 2.541346 GCAACCAAAGAAAGCAAGAAGC 59.459 45.455 0.00 0.00 46.19 3.86
6800 10234 0.700564 ACATTGGAGTCCATGGCTGT 59.299 50.000 14.00 11.47 31.53 4.40
6810 10244 1.712018 CCATGGCTGTGACGATGCTG 61.712 60.000 0.00 0.00 0.00 4.41
6813 10247 2.747822 GGCTGTGACGATGCTGCAG 61.748 63.158 10.11 10.11 0.00 4.41
6924 10358 2.617274 AAAACTGGCTCGCCGCTTC 61.617 57.895 3.14 0.00 39.42 3.86
6939 10373 2.036098 TTCGTGCCCCCGAGTCTA 59.964 61.111 0.00 0.00 38.23 2.59
6947 10381 0.036671 CCCCCGAGTCTACAACAACC 60.037 60.000 0.00 0.00 0.00 3.77
6975 10409 1.623359 CTCTCCGCTCGTCTTTTCTG 58.377 55.000 0.00 0.00 0.00 3.02
6978 10412 0.959553 TCCGCTCGTCTTTTCTGTCT 59.040 50.000 0.00 0.00 0.00 3.41
7005 10439 4.828704 CTTTCAAGCTTTGCAACACAATG 58.171 39.130 0.00 0.00 38.31 2.82
7006 10440 2.823984 TCAAGCTTTGCAACACAATGG 58.176 42.857 0.00 0.00 38.31 3.16
7008 10442 0.464870 AGCTTTGCAACACAATGGCA 59.535 45.000 0.00 0.00 38.80 4.92
7009 10443 1.071071 AGCTTTGCAACACAATGGCAT 59.929 42.857 0.00 0.00 38.80 4.40
7010 10444 2.299582 AGCTTTGCAACACAATGGCATA 59.700 40.909 0.00 0.00 38.80 3.14
7011 10445 2.412770 GCTTTGCAACACAATGGCATAC 59.587 45.455 0.00 0.00 38.31 2.39
7012 10446 3.651206 CTTTGCAACACAATGGCATACA 58.349 40.909 0.00 0.00 38.31 2.29
7013 10447 3.957591 TTGCAACACAATGGCATACAT 57.042 38.095 0.00 0.00 43.07 2.29
7014 10448 3.507103 TGCAACACAATGGCATACATC 57.493 42.857 0.00 0.00 39.40 3.06
7015 10449 3.090790 TGCAACACAATGGCATACATCT 58.909 40.909 0.00 0.00 39.40 2.90
7016 10450 3.129113 TGCAACACAATGGCATACATCTC 59.871 43.478 0.00 0.00 39.40 2.75
7017 10451 3.129113 GCAACACAATGGCATACATCTCA 59.871 43.478 0.00 0.00 39.40 3.27
7018 10452 4.202080 GCAACACAATGGCATACATCTCAT 60.202 41.667 0.00 0.00 39.40 2.90
7019 10453 5.680408 GCAACACAATGGCATACATCTCATT 60.680 40.000 0.00 0.00 39.40 2.57
7020 10454 6.459985 GCAACACAATGGCATACATCTCATTA 60.460 38.462 0.00 0.00 39.40 1.90
7021 10455 7.654568 CAACACAATGGCATACATCTCATTAT 58.345 34.615 0.00 0.00 39.40 1.28
7022 10456 7.444629 ACACAATGGCATACATCTCATTATC 57.555 36.000 0.00 0.00 39.40 1.75
7023 10457 6.148315 ACACAATGGCATACATCTCATTATCG 59.852 38.462 0.00 0.00 39.40 2.92
7024 10458 6.369615 CACAATGGCATACATCTCATTATCGA 59.630 38.462 0.00 0.00 39.40 3.59
7025 10459 6.369890 ACAATGGCATACATCTCATTATCGAC 59.630 38.462 0.00 0.00 39.40 4.20
7026 10460 5.728637 TGGCATACATCTCATTATCGACT 57.271 39.130 0.00 0.00 0.00 4.18
7027 10461 5.714047 TGGCATACATCTCATTATCGACTC 58.286 41.667 0.00 0.00 0.00 3.36
7028 10462 5.478332 TGGCATACATCTCATTATCGACTCT 59.522 40.000 0.00 0.00 0.00 3.24
7029 10463 6.659242 TGGCATACATCTCATTATCGACTCTA 59.341 38.462 0.00 0.00 0.00 2.43
7030 10464 6.970043 GGCATACATCTCATTATCGACTCTAC 59.030 42.308 0.00 0.00 0.00 2.59
7031 10465 7.362142 GGCATACATCTCATTATCGACTCTACA 60.362 40.741 0.00 0.00 0.00 2.74
7032 10466 7.483375 GCATACATCTCATTATCGACTCTACAC 59.517 40.741 0.00 0.00 0.00 2.90
7033 10467 8.726068 CATACATCTCATTATCGACTCTACACT 58.274 37.037 0.00 0.00 0.00 3.55
7034 10468 6.964908 ACATCTCATTATCGACTCTACACTG 58.035 40.000 0.00 0.00 0.00 3.66
7035 10469 6.768381 ACATCTCATTATCGACTCTACACTGA 59.232 38.462 0.00 0.00 0.00 3.41
7036 10470 7.446931 ACATCTCATTATCGACTCTACACTGAT 59.553 37.037 0.00 0.00 0.00 2.90
7103 10537 7.552687 ACATTTATGAACCCACTGTATGTGTAG 59.447 37.037 0.00 0.00 44.81 2.74
7130 10571 9.506018 TGAACCCTAGTAAGTTTAATTAACACC 57.494 33.333 0.00 0.00 39.30 4.16
7170 10730 4.624024 CACACAAGACCATGCATTCAATTC 59.376 41.667 0.00 0.00 0.00 2.17
7186 10746 9.321562 GCATTCAATTCAAATTCATGACCTATT 57.678 29.630 0.00 0.00 0.00 1.73
7253 10816 5.337578 TTTGTTTTTCAGGAGTTGAAGGG 57.662 39.130 0.00 0.00 46.01 3.95
7398 10962 9.515020 TTTTTGACAATATGACAGTTTCAGAAC 57.485 29.630 0.00 0.00 37.77 3.01
7401 10965 6.765512 TGACAATATGACAGTTTCAGAACACA 59.234 34.615 0.00 0.00 37.77 3.72
7471 11035 3.018149 GAGGACGGTAGCCTATAGGATG 58.982 54.545 23.61 7.14 35.44 3.51
7473 11037 2.754002 GGACGGTAGCCTATAGGATGTC 59.246 54.545 23.61 18.33 37.39 3.06
7511 11076 8.443937 GTTTTAGTTTATTGACTGATCGAGCTT 58.556 33.333 0.90 0.00 0.00 3.74
7574 11139 9.994432 GAGTTAAAGATGACTAATGTTCCATTG 57.006 33.333 0.00 0.00 0.00 2.82
7599 11164 4.545823 ATTCACCAGTGTTGTTGTTACG 57.454 40.909 0.00 0.00 0.00 3.18
7654 11223 4.576463 ACGGCATTATCAGAAACCTTGATC 59.424 41.667 0.00 0.00 36.68 2.92
7669 11238 6.405278 ACCTTGATCGAAAATTGTCCTTTT 57.595 33.333 0.00 0.00 0.00 2.27
7763 11332 4.353777 ACAGGTAAGAGCAGACCATTCTA 58.646 43.478 0.00 0.00 38.27 2.10
7769 11339 6.704050 GGTAAGAGCAGACCATTCTAAATCTC 59.296 42.308 0.00 0.00 35.65 2.75
7842 11412 6.732154 ACCATCTTCTTGATTATTGATTGCG 58.268 36.000 0.00 0.00 32.05 4.85
7850 11420 8.044060 TCTTGATTATTGATTGCGTTTTCTCT 57.956 30.769 0.00 0.00 0.00 3.10
7883 11453 4.016444 TCAACTTATGGTCTCCCAAATGC 58.984 43.478 0.00 0.00 46.04 3.56
7925 11496 4.742012 AGAGTTCTTCCCTACTGTTCTCA 58.258 43.478 0.00 0.00 0.00 3.27
7926 11497 4.525100 AGAGTTCTTCCCTACTGTTCTCAC 59.475 45.833 0.00 0.00 0.00 3.51
8019 11590 2.944129 ACTCTGCAAAAGCCTGGTAAA 58.056 42.857 0.00 0.00 0.00 2.01
8073 11644 6.575162 ACTGAATTCCACCATCTTTTGTAC 57.425 37.500 2.27 0.00 0.00 2.90
8402 11974 8.675504 CAAATCATCAGAAGAGCTTTGTATCTT 58.324 33.333 0.00 0.00 38.46 2.40
8406 11978 5.248640 TCAGAAGAGCTTTGTATCTTTGGG 58.751 41.667 0.00 0.00 35.93 4.12
8434 12006 4.141459 ACTTGAGTCATGATGATGCCAGAT 60.141 41.667 12.65 0.00 0.00 2.90
8462 12034 7.946655 TTCAGTAGTGACTTACAAGAATGTG 57.053 36.000 0.00 0.00 35.28 3.21
8488 12060 0.532862 ATTGCGCGGGAAGATAGGTG 60.533 55.000 8.83 0.00 0.00 4.00
8550 12124 1.839994 TCAGCCATACCCAAGGAGAAG 59.160 52.381 0.00 0.00 0.00 2.85
8571 12145 2.979676 TCTTGTTGCTGGCTGCCG 60.980 61.111 14.98 10.05 42.00 5.69
8733 12391 0.990374 AGAGAGATGCAAGGTGGCTT 59.010 50.000 0.00 0.00 34.04 4.35
8812 12470 5.163622 CCGGTGAATTCTTATGCACAAAGAT 60.164 40.000 12.72 1.36 41.46 2.40
8815 12473 8.131100 CGGTGAATTCTTATGCACAAAGATAAT 58.869 33.333 12.72 3.86 41.46 1.28
8818 12477 8.970020 TGAATTCTTATGCACAAAGATAATGGT 58.030 29.630 12.72 0.00 33.17 3.55
8860 12530 4.388773 CGAGTTCCATTCAGAAAACGATCA 59.611 41.667 0.00 0.00 32.27 2.92
8861 12531 5.063944 CGAGTTCCATTCAGAAAACGATCAT 59.936 40.000 0.00 0.00 32.27 2.45
8862 12532 6.428385 AGTTCCATTCAGAAAACGATCATC 57.572 37.500 0.00 0.00 0.00 2.92
8863 12533 6.176183 AGTTCCATTCAGAAAACGATCATCT 58.824 36.000 0.00 0.00 0.00 2.90
8864 12534 7.331026 AGTTCCATTCAGAAAACGATCATCTA 58.669 34.615 0.00 0.00 0.00 1.98
8865 12535 7.989741 AGTTCCATTCAGAAAACGATCATCTAT 59.010 33.333 0.00 0.00 0.00 1.98
8866 12536 7.719778 TCCATTCAGAAAACGATCATCTATG 57.280 36.000 0.00 0.00 0.00 2.23
8867 12537 6.203530 TCCATTCAGAAAACGATCATCTATGC 59.796 38.462 0.00 0.00 0.00 3.14
8868 12538 6.017687 CCATTCAGAAAACGATCATCTATGCA 60.018 38.462 0.00 0.00 0.00 3.96
8869 12539 6.594284 TTCAGAAAACGATCATCTATGCAG 57.406 37.500 0.00 0.00 0.00 4.41
8870 12540 5.664457 TCAGAAAACGATCATCTATGCAGT 58.336 37.500 0.00 0.00 0.00 4.40
8871 12541 5.750547 TCAGAAAACGATCATCTATGCAGTC 59.249 40.000 0.00 0.00 0.00 3.51
9230 12909 1.876714 CCCGATGTCGTAGTTGGCG 60.877 63.158 1.44 0.00 37.74 5.69
9272 12951 3.264866 GAACGACCGCTCCGACACT 62.265 63.158 0.00 0.00 0.00 3.55
9332 13011 3.936203 GTGTCCACCGACCTGCCA 61.936 66.667 0.00 0.00 38.32 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 65 9.241919 ACACCATAACATATTTCATTTGAGACA 57.758 29.630 0.00 0.00 0.00 3.41
101 103 4.321452 CCACACATTTTACAGCAGCAAGAT 60.321 41.667 0.00 0.00 0.00 2.40
102 104 3.004629 CCACACATTTTACAGCAGCAAGA 59.995 43.478 0.00 0.00 0.00 3.02
153 156 8.437575 AGACTTGTATTTAGAAACAGAGGGAAA 58.562 33.333 0.00 0.00 0.00 3.13
154 157 7.974504 AGACTTGTATTTAGAAACAGAGGGAA 58.025 34.615 0.00 0.00 0.00 3.97
155 158 7.554959 AGACTTGTATTTAGAAACAGAGGGA 57.445 36.000 0.00 0.00 0.00 4.20
156 159 8.622948 AAAGACTTGTATTTAGAAACAGAGGG 57.377 34.615 0.00 0.00 0.00 4.30
192 195 9.872721 CTCCGTATGTAGTCTATGAATAGTCTA 57.127 37.037 0.00 1.63 32.46 2.59
193 196 7.334921 GCTCCGTATGTAGTCTATGAATAGTCT 59.665 40.741 3.23 3.23 34.15 3.24
194 197 7.119407 TGCTCCGTATGTAGTCTATGAATAGTC 59.881 40.741 0.00 0.00 0.00 2.59
195 198 6.940867 TGCTCCGTATGTAGTCTATGAATAGT 59.059 38.462 0.00 0.00 0.00 2.12
196 199 7.379098 TGCTCCGTATGTAGTCTATGAATAG 57.621 40.000 0.00 0.00 0.00 1.73
197 200 7.754851 TTGCTCCGTATGTAGTCTATGAATA 57.245 36.000 0.00 0.00 0.00 1.75
198 201 6.650427 TTGCTCCGTATGTAGTCTATGAAT 57.350 37.500 0.00 0.00 0.00 2.57
199 202 6.459670 TTTGCTCCGTATGTAGTCTATGAA 57.540 37.500 0.00 0.00 0.00 2.57
200 203 6.459670 TTTTGCTCCGTATGTAGTCTATGA 57.540 37.500 0.00 0.00 0.00 2.15
201 204 6.923508 TCATTTTGCTCCGTATGTAGTCTATG 59.076 38.462 0.00 0.00 0.00 2.23
202 205 7.050970 TCATTTTGCTCCGTATGTAGTCTAT 57.949 36.000 0.00 0.00 0.00 1.98
203 206 6.459670 TCATTTTGCTCCGTATGTAGTCTA 57.540 37.500 0.00 0.00 0.00 2.59
204 207 5.339008 TCATTTTGCTCCGTATGTAGTCT 57.661 39.130 0.00 0.00 0.00 3.24
205 208 6.604735 ATTCATTTTGCTCCGTATGTAGTC 57.395 37.500 0.00 0.00 0.00 2.59
206 209 8.500753 TTTATTCATTTTGCTCCGTATGTAGT 57.499 30.769 0.00 0.00 0.00 2.73
207 210 9.599322 GATTTATTCATTTTGCTCCGTATGTAG 57.401 33.333 0.00 0.00 0.00 2.74
208 211 9.337396 AGATTTATTCATTTTGCTCCGTATGTA 57.663 29.630 0.00 0.00 0.00 2.29
209 212 8.225603 AGATTTATTCATTTTGCTCCGTATGT 57.774 30.769 0.00 0.00 0.00 2.29
210 213 9.599322 GTAGATTTATTCATTTTGCTCCGTATG 57.401 33.333 0.00 0.00 0.00 2.39
211 214 9.337396 TGTAGATTTATTCATTTTGCTCCGTAT 57.663 29.630 0.00 0.00 0.00 3.06
212 215 8.609176 GTGTAGATTTATTCATTTTGCTCCGTA 58.391 33.333 0.00 0.00 0.00 4.02
213 216 7.336931 AGTGTAGATTTATTCATTTTGCTCCGT 59.663 33.333 0.00 0.00 0.00 4.69
214 217 7.697691 AGTGTAGATTTATTCATTTTGCTCCG 58.302 34.615 0.00 0.00 0.00 4.63
215 218 8.897752 AGAGTGTAGATTTATTCATTTTGCTCC 58.102 33.333 0.00 0.00 0.00 4.70
242 245 9.224267 ACATACGGATGTATATAGACGTAGTTT 57.776 33.333 12.79 0.00 43.41 2.66
243 246 8.783833 ACATACGGATGTATATAGACGTAGTT 57.216 34.615 12.79 0.00 43.41 2.24
244 247 9.526713 CTACATACGGATGTATATAGACGTAGT 57.473 37.037 20.64 11.55 45.77 2.73
245 248 9.526713 ACTACATACGGATGTATATAGACGTAG 57.473 37.037 20.64 9.36 45.42 3.51
246 249 9.521503 GACTACATACGGATGTATATAGACGTA 57.478 37.037 20.64 9.65 45.42 3.57
247 250 7.493971 GGACTACATACGGATGTATATAGACGT 59.506 40.741 20.64 12.85 45.42 4.34
248 251 7.493645 TGGACTACATACGGATGTATATAGACG 59.506 40.741 20.64 9.79 45.42 4.18
249 252 8.728337 TGGACTACATACGGATGTATATAGAC 57.272 38.462 20.64 10.95 45.42 2.59
254 257 9.689501 TCAATATGGACTACATACGGATGTATA 57.310 33.333 20.64 11.30 45.42 1.47
255 258 8.589701 TCAATATGGACTACATACGGATGTAT 57.410 34.615 20.64 9.39 45.42 2.29
256 259 8.411991 TTCAATATGGACTACATACGGATGTA 57.588 34.615 19.32 19.32 44.77 2.29
258 261 8.777865 AATTCAATATGGACTACATACGGATG 57.222 34.615 5.94 5.94 44.41 3.51
259 262 8.816894 AGAATTCAATATGGACTACATACGGAT 58.183 33.333 8.44 0.00 44.41 4.18
260 263 8.088365 CAGAATTCAATATGGACTACATACGGA 58.912 37.037 8.44 0.00 44.41 4.69
261 264 7.872993 ACAGAATTCAATATGGACTACATACGG 59.127 37.037 8.44 0.00 44.41 4.02
262 265 8.818141 ACAGAATTCAATATGGACTACATACG 57.182 34.615 8.44 0.00 44.41 3.06
269 272 9.606631 GTCTTTCTACAGAATTCAATATGGACT 57.393 33.333 8.44 0.00 33.54 3.85
270 273 9.606631 AGTCTTTCTACAGAATTCAATATGGAC 57.393 33.333 8.44 6.34 33.54 4.02
292 295 8.804204 CCTCCGTTCCTAAATATATACAAGTCT 58.196 37.037 0.00 0.00 0.00 3.24
293 296 8.033626 CCCTCCGTTCCTAAATATATACAAGTC 58.966 40.741 0.00 0.00 0.00 3.01
294 297 7.731688 TCCCTCCGTTCCTAAATATATACAAGT 59.268 37.037 0.00 0.00 0.00 3.16
295 298 8.130671 TCCCTCCGTTCCTAAATATATACAAG 57.869 38.462 0.00 0.00 0.00 3.16
296 299 7.731688 ACTCCCTCCGTTCCTAAATATATACAA 59.268 37.037 0.00 0.00 0.00 2.41
297 300 7.243824 ACTCCCTCCGTTCCTAAATATATACA 58.756 38.462 0.00 0.00 0.00 2.29
298 301 7.715266 ACTCCCTCCGTTCCTAAATATATAC 57.285 40.000 0.00 0.00 0.00 1.47
300 303 9.418839 GTATACTCCCTCCGTTCCTAAATATAT 57.581 37.037 0.00 0.00 0.00 0.86
301 304 8.393259 TGTATACTCCCTCCGTTCCTAAATATA 58.607 37.037 4.17 0.00 0.00 0.86
302 305 7.178097 GTGTATACTCCCTCCGTTCCTAAATAT 59.822 40.741 4.17 0.00 0.00 1.28
303 306 6.491403 GTGTATACTCCCTCCGTTCCTAAATA 59.509 42.308 4.17 0.00 0.00 1.40
304 307 5.303845 GTGTATACTCCCTCCGTTCCTAAAT 59.696 44.000 4.17 0.00 0.00 1.40
305 308 4.646492 GTGTATACTCCCTCCGTTCCTAAA 59.354 45.833 4.17 0.00 0.00 1.85
306 309 4.210331 GTGTATACTCCCTCCGTTCCTAA 58.790 47.826 4.17 0.00 0.00 2.69
307 310 3.202818 TGTGTATACTCCCTCCGTTCCTA 59.797 47.826 4.17 0.00 0.00 2.94
308 311 2.024655 TGTGTATACTCCCTCCGTTCCT 60.025 50.000 4.17 0.00 0.00 3.36
309 312 2.381911 TGTGTATACTCCCTCCGTTCC 58.618 52.381 4.17 0.00 0.00 3.62
310 313 4.460948 TTTGTGTATACTCCCTCCGTTC 57.539 45.455 4.17 0.00 0.00 3.95
311 314 4.766375 CATTTGTGTATACTCCCTCCGTT 58.234 43.478 4.17 0.00 0.00 4.44
312 315 3.431766 GCATTTGTGTATACTCCCTCCGT 60.432 47.826 4.17 0.00 0.00 4.69
313 316 3.131396 GCATTTGTGTATACTCCCTCCG 58.869 50.000 4.17 0.00 0.00 4.63
314 317 3.118038 TGGCATTTGTGTATACTCCCTCC 60.118 47.826 4.17 0.00 0.00 4.30
315 318 4.150897 TGGCATTTGTGTATACTCCCTC 57.849 45.455 4.17 0.00 0.00 4.30
316 319 4.464008 CATGGCATTTGTGTATACTCCCT 58.536 43.478 0.00 0.00 0.00 4.20
317 320 3.004734 GCATGGCATTTGTGTATACTCCC 59.995 47.826 0.00 0.00 0.00 4.30
318 321 3.631686 TGCATGGCATTTGTGTATACTCC 59.368 43.478 0.00 0.00 31.71 3.85
319 322 4.898829 TGCATGGCATTTGTGTATACTC 57.101 40.909 0.00 0.83 31.71 2.59
335 338 2.442212 TTTCCACACAAGCATGCATG 57.558 45.000 22.70 22.70 0.00 4.06
456 2554 4.693566 CGCCATGAAACCTTTACAGAGTAA 59.306 41.667 0.00 0.00 0.00 2.24
472 2570 6.696583 CAGCATAAAAATGTATTTCGCCATGA 59.303 34.615 0.00 0.00 0.00 3.07
473 2571 6.074195 CCAGCATAAAAATGTATTTCGCCATG 60.074 38.462 0.00 0.00 0.00 3.66
474 2572 5.984926 CCAGCATAAAAATGTATTTCGCCAT 59.015 36.000 0.00 0.00 0.00 4.40
475 2573 5.126222 TCCAGCATAAAAATGTATTTCGCCA 59.874 36.000 0.00 0.00 0.00 5.69
477 2575 7.275560 ACTTTCCAGCATAAAAATGTATTTCGC 59.724 33.333 0.00 0.00 0.00 4.70
478 2576 8.687824 ACTTTCCAGCATAAAAATGTATTTCG 57.312 30.769 0.00 0.00 0.00 3.46
516 3342 7.962373 CGAAATACATTTTGATGTGAGCTGTAA 59.038 33.333 0.00 0.00 36.08 2.41
682 3528 5.234752 GTTCAAATCCCGGCAATTTAAACT 58.765 37.500 14.70 0.00 0.00 2.66
683 3529 4.390603 GGTTCAAATCCCGGCAATTTAAAC 59.609 41.667 14.04 14.04 0.00 2.01
686 3532 2.498078 GGGTTCAAATCCCGGCAATTTA 59.502 45.455 11.39 0.00 35.27 1.40
687 3533 1.277842 GGGTTCAAATCCCGGCAATTT 59.722 47.619 0.00 1.03 35.27 1.82
688 3534 0.901827 GGGTTCAAATCCCGGCAATT 59.098 50.000 0.00 0.00 35.27 2.32
794 3640 5.125417 TGGCTGTGTTGCTCCTAAATTTATC 59.875 40.000 0.00 0.00 0.00 1.75
795 3641 5.016173 TGGCTGTGTTGCTCCTAAATTTAT 58.984 37.500 0.00 0.00 0.00 1.40
902 3748 0.769247 AGTTTGTAGGCGGTTCCCTT 59.231 50.000 0.00 0.00 36.41 3.95
915 3761 1.528309 CCGTGGGCAAGGAGTTTGT 60.528 57.895 0.00 0.00 39.08 2.83
1094 3941 1.067199 CGCAGAACACGTACGTACCC 61.067 60.000 22.34 12.32 0.00 3.69
1138 3985 0.600255 CAAACCGTGCGAGAAGGAGT 60.600 55.000 0.00 0.00 0.00 3.85
1144 3991 2.449031 ATCTGCCAAACCGTGCGAGA 62.449 55.000 0.00 0.00 0.00 4.04
1156 4003 1.139498 TCTCCAACCCCAATCTGCCA 61.139 55.000 0.00 0.00 0.00 4.92
1158 4005 0.394899 CCTCTCCAACCCCAATCTGC 60.395 60.000 0.00 0.00 0.00 4.26
1169 4016 2.043115 TCTCTCTACAAGCCCTCTCCAA 59.957 50.000 0.00 0.00 0.00 3.53
1180 4027 6.828785 GCATTCCCCTATTTTTCTCTCTACAA 59.171 38.462 0.00 0.00 0.00 2.41
1181 4028 6.357367 GCATTCCCCTATTTTTCTCTCTACA 58.643 40.000 0.00 0.00 0.00 2.74
1212 4065 9.092338 TCACCGATTTTATACTAGGGCTAATTA 57.908 33.333 0.00 0.00 0.00 1.40
1214 4067 7.549147 TCACCGATTTTATACTAGGGCTAAT 57.451 36.000 0.00 0.00 0.00 1.73
1216 4069 6.517864 GCTTCACCGATTTTATACTAGGGCTA 60.518 42.308 0.00 0.00 0.00 3.93
1217 4070 5.742255 GCTTCACCGATTTTATACTAGGGCT 60.742 44.000 0.00 0.00 0.00 5.19
1218 4071 4.451435 GCTTCACCGATTTTATACTAGGGC 59.549 45.833 0.00 0.00 0.00 5.19
1221 4074 6.144080 CCGAAGCTTCACCGATTTTATACTAG 59.856 42.308 25.47 3.47 0.00 2.57
1222 4075 5.981315 CCGAAGCTTCACCGATTTTATACTA 59.019 40.000 25.47 0.00 0.00 1.82
1223 4076 4.809426 CCGAAGCTTCACCGATTTTATACT 59.191 41.667 25.47 0.00 0.00 2.12
1224 4077 4.552184 GCCGAAGCTTCACCGATTTTATAC 60.552 45.833 25.47 0.00 35.50 1.47
1225 4078 3.558418 GCCGAAGCTTCACCGATTTTATA 59.442 43.478 25.47 0.00 35.50 0.98
1226 4079 2.354821 GCCGAAGCTTCACCGATTTTAT 59.645 45.455 25.47 0.00 35.50 1.40
1236 4089 0.796312 GAATGTTCGCCGAAGCTTCA 59.204 50.000 25.47 5.74 36.60 3.02
1250 4103 5.007682 GTGGTACAGGTAACAATGGAATGT 58.992 41.667 0.00 0.00 41.80 2.71
1255 4108 4.380444 GCAATGTGGTACAGGTAACAATGG 60.380 45.833 0.00 0.00 41.80 3.16
1261 4114 2.910319 AGAGGCAATGTGGTACAGGTAA 59.090 45.455 0.00 0.00 41.80 2.85
1335 4188 2.579410 AAAGGGTTGAGCCGTACAAT 57.421 45.000 0.00 0.00 38.44 2.71
1339 4192 1.070445 TCGAAAAAGGGTTGAGCCGTA 59.930 47.619 0.00 0.00 38.44 4.02
1341 4194 1.165270 ATCGAAAAAGGGTTGAGCCG 58.835 50.000 0.00 0.00 38.44 5.52
1342 4195 2.556622 TGAATCGAAAAAGGGTTGAGCC 59.443 45.455 0.00 0.00 0.00 4.70
1360 4213 8.352137 ACCACATGAATCACTATCATTTTGAA 57.648 30.769 0.00 0.00 35.38 2.69
1389 4242 9.181061 GCAATAGAAAACATTAAGGGTAGGTTA 57.819 33.333 0.00 0.00 0.00 2.85
1390 4243 7.148137 CGCAATAGAAAACATTAAGGGTAGGTT 60.148 37.037 0.00 0.00 0.00 3.50
1391 4244 6.317893 CGCAATAGAAAACATTAAGGGTAGGT 59.682 38.462 0.00 0.00 0.00 3.08
1392 4245 6.540914 TCGCAATAGAAAACATTAAGGGTAGG 59.459 38.462 0.00 0.00 0.00 3.18
1393 4246 7.280205 ACTCGCAATAGAAAACATTAAGGGTAG 59.720 37.037 0.00 0.00 0.00 3.18
1396 4249 6.436843 ACTCGCAATAGAAAACATTAAGGG 57.563 37.500 0.00 0.00 0.00 3.95
1412 4265 7.225931 GGACCAGTAATTAATCAATACTCGCAA 59.774 37.037 0.00 0.00 0.00 4.85
1435 4289 4.213482 AGTGCGTCAAAGACAAAATAGGAC 59.787 41.667 0.00 0.00 32.09 3.85
1449 4303 1.336517 CGAGAAACCCTAGTGCGTCAA 60.337 52.381 0.00 0.00 0.00 3.18
1454 4308 1.221021 CCCCGAGAAACCCTAGTGC 59.779 63.158 0.00 0.00 0.00 4.40
1457 4311 1.265454 ACTGCCCCGAGAAACCCTAG 61.265 60.000 0.00 0.00 0.00 3.02
1482 4336 2.200067 GATCGAATCAGTGACTGGCAG 58.800 52.381 14.16 14.16 31.51 4.85
1499 4353 3.926616 TGGTCCTTGAAAACTCTCGATC 58.073 45.455 0.00 0.00 0.00 3.69
1500 4354 4.020218 TGATGGTCCTTGAAAACTCTCGAT 60.020 41.667 0.00 0.00 0.00 3.59
1520 4374 2.636644 TGGGGCATGATCCACTGAT 58.363 52.632 0.00 0.00 0.00 2.90
1550 4404 0.833287 AGGGCAAGCTGTCGTCATAT 59.167 50.000 0.00 0.00 0.00 1.78
1622 4476 5.435291 AGCATGATTCTACTCTTTGAAGGG 58.565 41.667 0.00 0.00 0.00 3.95
1717 4571 7.765307 AGCAAAATGACAAGATGTACCAATAG 58.235 34.615 0.00 0.00 0.00 1.73
1817 4671 5.869753 AACGAAATGTCTTGAGGAATGAG 57.130 39.130 0.00 0.00 0.00 2.90
1818 4672 5.762711 TGAAACGAAATGTCTTGAGGAATGA 59.237 36.000 0.00 0.00 0.00 2.57
1819 4673 6.000891 TGAAACGAAATGTCTTGAGGAATG 57.999 37.500 0.00 0.00 0.00 2.67
1820 4674 6.824305 ATGAAACGAAATGTCTTGAGGAAT 57.176 33.333 0.00 0.00 0.00 3.01
1821 4675 7.626240 GCATATGAAACGAAATGTCTTGAGGAA 60.626 37.037 6.97 0.00 0.00 3.36
1822 4676 6.183360 GCATATGAAACGAAATGTCTTGAGGA 60.183 38.462 6.97 0.00 0.00 3.71
1823 4677 5.967674 GCATATGAAACGAAATGTCTTGAGG 59.032 40.000 6.97 0.00 0.00 3.86
1875 4729 1.265365 GCCAGAACAAGTGCTGACTTC 59.735 52.381 9.80 0.00 40.68 3.01
2002 4856 9.076596 GTGTGGAAGCATGTAATATTTCTTTTC 57.923 33.333 0.00 0.00 0.00 2.29
2045 4907 5.643379 AATGTCCCATGTCATGTTGTTAC 57.357 39.130 11.84 3.42 0.00 2.50
2160 5022 6.102897 AGACGGATTAGAAGGTAATGGATG 57.897 41.667 0.00 0.00 0.00 3.51
2161 5023 7.896496 AGATAGACGGATTAGAAGGTAATGGAT 59.104 37.037 0.00 0.00 0.00 3.41
2162 5024 7.176865 CAGATAGACGGATTAGAAGGTAATGGA 59.823 40.741 0.00 0.00 0.00 3.41
2163 5025 7.316640 CAGATAGACGGATTAGAAGGTAATGG 58.683 42.308 0.00 0.00 0.00 3.16
2164 5026 7.039644 ACCAGATAGACGGATTAGAAGGTAATG 60.040 40.741 0.00 0.00 0.00 1.90
2165 5027 7.011382 ACCAGATAGACGGATTAGAAGGTAAT 58.989 38.462 0.00 0.00 0.00 1.89
2166 5028 6.371278 ACCAGATAGACGGATTAGAAGGTAA 58.629 40.000 0.00 0.00 0.00 2.85
2167 5029 5.950023 ACCAGATAGACGGATTAGAAGGTA 58.050 41.667 0.00 0.00 0.00 3.08
2211 5073 6.314917 AGGACATTGGTTAGGAATTTCTGTT 58.685 36.000 0.00 0.00 0.00 3.16
2219 5081 6.727231 TCTGTACTAAGGACATTGGTTAGGAA 59.273 38.462 0.00 0.00 34.05 3.36
2360 5222 3.694734 ACAACACTGAAAACGAGCAATG 58.305 40.909 0.00 0.00 0.00 2.82
2517 5379 9.807649 GGATGTCATTTCAAAGCTACAAATAAT 57.192 29.630 0.00 0.00 0.00 1.28
2573 5435 2.301346 CCCATAACTGCAAGACCCATC 58.699 52.381 0.00 0.00 37.43 3.51
2580 5442 4.582701 TGAAACAACCCATAACTGCAAG 57.417 40.909 0.00 0.00 42.29 4.01
2598 5460 5.503357 GCGTTTCACACAAACTCTACATGAA 60.503 40.000 0.00 0.00 0.00 2.57
2666 5528 3.118884 ACCATGGACCGTATTCACTACAC 60.119 47.826 21.47 0.00 0.00 2.90
2788 5650 6.572519 TCCAAAATGTTTCTCAACTTTCCTG 58.427 36.000 0.00 0.00 30.85 3.86
2830 5693 3.966979 TCCAGTACAATGTGCCATTGAT 58.033 40.909 25.31 15.78 33.51 2.57
2953 5816 4.574674 AATGGTCAAAGATGCCTACTGA 57.425 40.909 0.00 0.00 0.00 3.41
2992 5855 8.477419 AATATTGTCTTTTCCCAAAACTCTGA 57.523 30.769 0.00 0.00 0.00 3.27
2993 5856 8.579863 AGAATATTGTCTTTTCCCAAAACTCTG 58.420 33.333 0.00 0.00 0.00 3.35
2994 5857 8.579863 CAGAATATTGTCTTTTCCCAAAACTCT 58.420 33.333 0.00 0.00 0.00 3.24
3057 5920 6.438763 CAACTGAGGATAAACTTTTGTGGTC 58.561 40.000 0.00 0.00 0.00 4.02
3097 5960 7.930325 ACATATTGACACATTCTCTATGGACTG 59.070 37.037 0.00 0.00 38.64 3.51
3098 5961 8.027524 ACATATTGACACATTCTCTATGGACT 57.972 34.615 0.00 0.00 38.64 3.85
3154 6017 6.887376 TTAATGATTGAACAGCGAGAGTAC 57.113 37.500 0.00 0.00 0.00 2.73
3276 6139 7.322664 ACAAATCGCAACAAAGGATCATAAAT 58.677 30.769 0.00 0.00 0.00 1.40
3294 6157 4.985044 AAACTCGACAGGTTACAAATCG 57.015 40.909 0.00 0.00 0.00 3.34
3304 6167 2.064762 CTGCAGAGAAAACTCGACAGG 58.935 52.381 8.42 0.00 31.85 4.00
3351 6214 2.892374 TGACATACCGCAACATGAGAG 58.108 47.619 0.00 0.00 0.00 3.20
3433 6296 6.054941 TGCATATAGATCACCAAAATGTCGT 58.945 36.000 0.00 0.00 0.00 4.34
3434 6297 6.544038 TGCATATAGATCACCAAAATGTCG 57.456 37.500 0.00 0.00 0.00 4.35
3435 6298 8.102800 TCATGCATATAGATCACCAAAATGTC 57.897 34.615 0.00 0.00 0.00 3.06
3474 6337 9.571810 TGTGCATTTAAATTGATAAGCAGTTAG 57.428 29.630 8.42 0.00 0.00 2.34
3547 6410 4.724798 TGTTATCTACAGTTGGCCCCTAAT 59.275 41.667 0.00 0.00 31.68 1.73
3603 6466 8.510505 GTGCCAAATGATTATTAAAGGCAAAAA 58.489 29.630 18.95 2.14 43.85 1.94
3634 6497 8.311836 ACAGCTCAGTATTTACAGCTTAGTTTA 58.688 33.333 1.07 0.00 40.33 2.01
3708 6571 9.040939 GGCTAAGAGCAAAACAAATAAAAGAAA 57.959 29.630 0.21 0.00 44.75 2.52
3725 6595 1.552792 AGTGGTCAGAAGGCTAAGAGC 59.447 52.381 0.00 0.00 41.46 4.09
3762 6632 3.319755 GGTCAAACACCATCTGCAAATG 58.680 45.455 0.00 0.00 45.98 2.32
3798 6668 2.045926 CCAAAGGAGACAGGCCCG 60.046 66.667 0.00 0.00 0.00 6.13
3813 6683 5.860648 AAAAGAGTTAGGGGAATTCTCCA 57.139 39.130 26.38 9.62 44.51 3.86
3858 6732 7.587037 TGATAGCAAGGATTTGATTAAAGGG 57.413 36.000 0.00 0.00 36.36 3.95
3953 6827 8.634475 AAGACAAATGCTTAAAGAAAACAGAC 57.366 30.769 0.00 0.00 0.00 3.51
4007 6881 8.547967 ACGCTACATGTCCAAATATAAATAGG 57.452 34.615 0.00 0.00 0.00 2.57
4029 6903 0.670854 GGTGAACTTGGAGAGGACGC 60.671 60.000 0.00 0.00 0.00 5.19
4076 6950 3.333029 TCATGAGCAGGAACGATCAAA 57.667 42.857 0.00 0.00 0.00 2.69
4133 7008 6.953101 AGGAAAATACCACTTTGTTTGGTTT 58.047 32.000 0.00 0.00 45.62 3.27
4206 7081 9.734984 TGCAGATACAAATCATTCATAGATCAT 57.265 29.630 0.00 0.00 34.28 2.45
4207 7082 8.996271 GTGCAGATACAAATCATTCATAGATCA 58.004 33.333 0.00 0.00 34.28 2.92
4208 7083 8.449397 GGTGCAGATACAAATCATTCATAGATC 58.551 37.037 0.00 0.00 34.28 2.75
4209 7084 7.392673 GGGTGCAGATACAAATCATTCATAGAT 59.607 37.037 0.00 0.00 34.28 1.98
4210 7085 6.712095 GGGTGCAGATACAAATCATTCATAGA 59.288 38.462 0.00 0.00 34.28 1.98
4211 7086 6.347969 CGGGTGCAGATACAAATCATTCATAG 60.348 42.308 0.00 0.00 34.28 2.23
4212 7087 5.469760 CGGGTGCAGATACAAATCATTCATA 59.530 40.000 0.00 0.00 34.28 2.15
4213 7088 4.276678 CGGGTGCAGATACAAATCATTCAT 59.723 41.667 0.00 0.00 34.28 2.57
4214 7089 3.627123 CGGGTGCAGATACAAATCATTCA 59.373 43.478 0.00 0.00 34.28 2.57
4215 7090 3.003689 CCGGGTGCAGATACAAATCATTC 59.996 47.826 0.00 0.00 34.28 2.67
4216 7091 2.951642 CCGGGTGCAGATACAAATCATT 59.048 45.455 0.00 0.00 34.28 2.57
4217 7092 2.092429 ACCGGGTGCAGATACAAATCAT 60.092 45.455 6.32 0.00 34.28 2.45
4218 7093 1.280710 ACCGGGTGCAGATACAAATCA 59.719 47.619 6.32 0.00 34.28 2.57
4219 7094 1.670811 CACCGGGTGCAGATACAAATC 59.329 52.381 15.29 0.00 0.00 2.17
4220 7095 1.681780 CCACCGGGTGCAGATACAAAT 60.682 52.381 21.88 0.00 31.34 2.32
4221 7096 0.322098 CCACCGGGTGCAGATACAAA 60.322 55.000 21.88 0.00 31.34 2.83
4222 7097 1.298340 CCACCGGGTGCAGATACAA 59.702 57.895 21.88 0.00 31.34 2.41
4223 7098 2.665089 CCCACCGGGTGCAGATACA 61.665 63.158 21.88 0.00 38.25 2.29
4224 7099 2.189521 CCCACCGGGTGCAGATAC 59.810 66.667 21.88 0.00 38.25 2.24
4266 7141 4.054825 CACCATTGCACCACGCCC 62.055 66.667 0.00 0.00 41.33 6.13
4299 7214 7.310664 TGAGTTACACACACTAGTATGCTAAC 58.689 38.462 0.00 7.51 0.00 2.34
4303 7218 6.157211 AGTTGAGTTACACACACTAGTATGC 58.843 40.000 0.00 0.00 0.00 3.14
4308 7237 7.169308 CCTGTTAAGTTGAGTTACACACACTAG 59.831 40.741 0.00 0.00 0.00 2.57
4313 7242 6.673154 AACCTGTTAAGTTGAGTTACACAC 57.327 37.500 0.00 0.00 0.00 3.82
4315 7244 6.094464 ACCAAACCTGTTAAGTTGAGTTACAC 59.906 38.462 0.00 0.00 0.00 2.90
4386 7538 7.664758 AGATGAAGAAATCCAAACAGAAAAGG 58.335 34.615 0.00 0.00 0.00 3.11
4390 7542 5.711976 GGGAGATGAAGAAATCCAAACAGAA 59.288 40.000 0.00 0.00 33.24 3.02
4411 7563 5.633655 TCACAAACTAGTAAACAAGGGGA 57.366 39.130 0.00 0.00 0.00 4.81
4509 7673 5.359860 GGGACTCCTGAAAAGAAAAGTTTGA 59.640 40.000 0.00 0.00 0.00 2.69
4542 7706 0.740737 GGATGGCATGGCAGTGTAAC 59.259 55.000 27.02 12.90 0.00 2.50
4546 7710 0.174845 CTTTGGATGGCATGGCAGTG 59.825 55.000 27.02 9.35 0.00 3.66
4549 7713 1.483004 CATTCTTTGGATGGCATGGCA 59.517 47.619 25.52 25.52 0.00 4.92
4696 7862 2.726821 TGATCCAGACCATCTTTTGCC 58.273 47.619 0.00 0.00 0.00 4.52
4708 7874 2.760634 TACGCTTGCTTTGATCCAGA 57.239 45.000 0.00 0.00 0.00 3.86
4719 7885 5.685841 TCACTCTTATTGTTTTACGCTTGC 58.314 37.500 0.00 0.00 0.00 4.01
4751 7917 9.005777 AGCCTTAAACATCGTATTCTACAAAAA 57.994 29.630 0.00 0.00 0.00 1.94
4752 7918 8.556213 AGCCTTAAACATCGTATTCTACAAAA 57.444 30.769 0.00 0.00 0.00 2.44
4765 7931 6.500684 TTGTGAGATGAAGCCTTAAACATC 57.499 37.500 0.00 0.00 39.24 3.06
4905 8071 0.253044 TTGGAGGGCTCATTCCTTCG 59.747 55.000 0.00 0.00 32.48 3.79
5081 8372 4.240096 CAAAGATTGGGAACACAGCAATC 58.760 43.478 0.00 0.00 42.67 2.67
5183 8589 2.969262 TCTGTCATGTGTACTGAACCCA 59.031 45.455 0.00 0.00 0.00 4.51
5185 8591 4.992381 GTTCTGTCATGTGTACTGAACC 57.008 45.455 17.73 6.85 43.96 3.62
5188 8594 3.895041 TGAGGTTCTGTCATGTGTACTGA 59.105 43.478 0.00 0.00 0.00 3.41
5219 8625 4.277174 TCCAAATGTACACACCACATGAAC 59.723 41.667 0.00 0.00 36.74 3.18
5345 8752 4.176120 AGAGAAGATAGCAAAATGGGGG 57.824 45.455 0.00 0.00 0.00 5.40
5346 8753 5.762218 CAGTAGAGAAGATAGCAAAATGGGG 59.238 44.000 0.00 0.00 0.00 4.96
5358 8765 9.342308 GCAGAGCTATATATCAGTAGAGAAGAT 57.658 37.037 0.00 0.00 0.00 2.40
5379 8786 9.262472 GTTCGTGTTACTTTAATAAATGCAGAG 57.738 33.333 0.00 0.00 0.00 3.35
5395 8802 6.358822 GCAAACCTAAATTCAGTTCGTGTTAC 59.641 38.462 0.00 0.00 0.00 2.50
5402 8809 7.637709 AAAATCGCAAACCTAAATTCAGTTC 57.362 32.000 0.00 0.00 0.00 3.01
5438 8851 9.988815 TTAGAAGAGAATATTGGAGATAACTGC 57.011 33.333 0.00 0.00 35.03 4.40
5496 8909 5.825593 AGTCATTCCTAGGAGAACACAAA 57.174 39.130 12.26 0.00 0.00 2.83
5646 9059 8.184192 CCTTCAAACCAAATATACAACTGCTAG 58.816 37.037 0.00 0.00 0.00 3.42
5734 9147 4.160642 ACCAATAGCATCATCAGCTTCA 57.839 40.909 0.00 0.00 43.25 3.02
5842 9255 9.070149 GTGCATCTAAGATTCATGAAGAAAAAC 57.930 33.333 14.54 2.06 40.22 2.43
5846 9259 6.541278 CCAGTGCATCTAAGATTCATGAAGAA 59.459 38.462 14.54 0.00 41.28 2.52
5884 9298 5.875224 TGTTACCAGAAATCCAGTCAATGA 58.125 37.500 0.00 0.00 0.00 2.57
5886 9300 6.153340 CCATTGTTACCAGAAATCCAGTCAAT 59.847 38.462 0.00 0.00 0.00 2.57
5987 9401 5.462068 GGTACAAAAACCAAGAAATGCTCAC 59.538 40.000 0.00 0.00 39.50 3.51
5989 9403 4.679654 CGGTACAAAAACCAAGAAATGCTC 59.320 41.667 0.00 0.00 39.71 4.26
6002 9416 5.761234 ACTTCTTGCACTATCGGTACAAAAA 59.239 36.000 0.00 0.00 31.61 1.94
6014 9428 6.230472 TCAGCTAATTTCACTTCTTGCACTA 58.770 36.000 0.00 0.00 0.00 2.74
6080 9497 6.665992 AGATAACAACCAGAGTACACAAGA 57.334 37.500 0.00 0.00 0.00 3.02
6081 9498 8.873830 CAATAGATAACAACCAGAGTACACAAG 58.126 37.037 0.00 0.00 0.00 3.16
6082 9499 7.333423 GCAATAGATAACAACCAGAGTACACAA 59.667 37.037 0.00 0.00 0.00 3.33
6270 9687 7.823745 AATGAACTGTTTAGACATTTCCAGT 57.176 32.000 12.19 0.00 41.92 4.00
6369 9786 6.484643 GCTTTAATGCTCCATATCTCTTCACA 59.515 38.462 6.10 0.00 0.00 3.58
6479 9896 7.034967 TGTTGACCCCTAACTAAAATGGTAT 57.965 36.000 0.00 0.00 0.00 2.73
6522 9954 5.360714 CCATGTTTTCATATACAGTTGGGCT 59.639 40.000 0.00 0.00 38.64 5.19
6541 9973 6.893020 AGGGTAAAAAGAGATCTACCATGT 57.107 37.500 11.34 0.00 36.34 3.21
6699 10133 1.476891 TCTCAGGCTAACTTGGCTACG 59.523 52.381 0.00 0.00 41.04 3.51
6750 10184 3.163630 TCTTGCTTTCTTTGGTTGCAC 57.836 42.857 0.00 0.00 33.13 4.57
6773 10207 1.146263 GACTCCAATGTAGGGGGCG 59.854 63.158 0.00 0.00 31.56 6.13
6813 10247 1.968540 AGTTTGCTCAGGCGGCTTC 60.969 57.895 9.66 1.79 42.25 3.86
6846 10280 4.722193 GCTGCAAGGTAGAGGCAA 57.278 55.556 0.00 0.00 37.06 4.52
6876 10310 1.625818 AGAAGCGGACAGAGTTTGGAT 59.374 47.619 0.00 0.00 0.00 3.41
6924 10358 2.642254 TTGTAGACTCGGGGGCACG 61.642 63.158 0.00 0.00 0.00 5.34
6933 10367 1.792949 CACTGCGGTTGTTGTAGACTC 59.207 52.381 0.00 0.00 0.00 3.36
6937 10371 1.852067 GCCCACTGCGGTTGTTGTAG 61.852 60.000 0.00 0.00 0.00 2.74
6939 10373 3.216292 GCCCACTGCGGTTGTTGT 61.216 61.111 0.00 0.00 0.00 3.32
6966 10400 6.604735 TTGAAAGCACTAGACAGAAAAGAC 57.395 37.500 0.00 0.00 0.00 3.01
6978 10412 8.721571 TTGTGTTGCAAAGCTTGAAAGCACTA 62.722 38.462 16.86 10.93 42.40 2.74
6992 10426 3.740631 TGTATGCCATTGTGTTGCAAA 57.259 38.095 0.00 0.00 40.91 3.68
6999 10433 6.369615 TCGATAATGAGATGTATGCCATTGTG 59.630 38.462 0.00 0.00 32.56 3.33
7000 10434 6.369890 GTCGATAATGAGATGTATGCCATTGT 59.630 38.462 0.00 0.00 32.56 2.71
7001 10435 6.592994 AGTCGATAATGAGATGTATGCCATTG 59.407 38.462 0.00 0.00 32.56 2.82
7002 10436 6.705302 AGTCGATAATGAGATGTATGCCATT 58.295 36.000 0.00 0.00 32.56 3.16
7003 10437 6.154192 AGAGTCGATAATGAGATGTATGCCAT 59.846 38.462 0.00 0.00 36.13 4.40
7004 10438 5.478332 AGAGTCGATAATGAGATGTATGCCA 59.522 40.000 0.00 0.00 0.00 4.92
7005 10439 5.960113 AGAGTCGATAATGAGATGTATGCC 58.040 41.667 0.00 0.00 0.00 4.40
7006 10440 7.483375 GTGTAGAGTCGATAATGAGATGTATGC 59.517 40.741 0.00 0.00 0.00 3.14
7008 10442 8.726068 CAGTGTAGAGTCGATAATGAGATGTAT 58.274 37.037 0.00 0.00 0.00 2.29
7009 10443 7.931948 TCAGTGTAGAGTCGATAATGAGATGTA 59.068 37.037 0.00 0.00 0.00 2.29
7010 10444 6.768381 TCAGTGTAGAGTCGATAATGAGATGT 59.232 38.462 0.00 0.00 0.00 3.06
7011 10445 7.195839 TCAGTGTAGAGTCGATAATGAGATG 57.804 40.000 0.00 0.00 0.00 2.90
7012 10446 7.994425 ATCAGTGTAGAGTCGATAATGAGAT 57.006 36.000 6.34 0.00 0.00 2.75
7019 10453 9.945904 ACATCTTATATCAGTGTAGAGTCGATA 57.054 33.333 0.00 0.00 0.00 2.92
7020 10454 8.856153 ACATCTTATATCAGTGTAGAGTCGAT 57.144 34.615 0.00 0.00 0.00 3.59
7021 10455 9.205719 GTACATCTTATATCAGTGTAGAGTCGA 57.794 37.037 0.00 0.00 0.00 4.20
7022 10456 9.210329 AGTACATCTTATATCAGTGTAGAGTCG 57.790 37.037 0.00 0.00 0.00 4.18
7024 10458 8.788806 GCAGTACATCTTATATCAGTGTAGAGT 58.211 37.037 0.00 0.00 0.00 3.24
7025 10459 8.787852 TGCAGTACATCTTATATCAGTGTAGAG 58.212 37.037 0.00 0.00 0.00 2.43
7026 10460 8.691661 TGCAGTACATCTTATATCAGTGTAGA 57.308 34.615 0.00 0.00 0.00 2.59
7027 10461 9.920133 ATTGCAGTACATCTTATATCAGTGTAG 57.080 33.333 0.00 0.00 0.00 2.74
7029 10463 9.618890 AAATTGCAGTACATCTTATATCAGTGT 57.381 29.630 0.00 0.00 0.00 3.55
7030 10464 9.874215 CAAATTGCAGTACATCTTATATCAGTG 57.126 33.333 0.00 0.00 0.00 3.66
7031 10465 9.836864 TCAAATTGCAGTACATCTTATATCAGT 57.163 29.630 0.00 0.00 0.00 3.41
7066 10500 5.861787 GGGTTCATAAATGTGTTTGCTGTAC 59.138 40.000 0.00 0.00 0.00 2.90
7141 10582 1.675483 GCATGGTCTTGTGTGTGTGAA 59.325 47.619 0.00 0.00 0.00 3.18
7142 10583 1.308047 GCATGGTCTTGTGTGTGTGA 58.692 50.000 0.00 0.00 0.00 3.58
7186 10746 1.353022 AGCAGGTCCCCGTAATGAAAA 59.647 47.619 0.00 0.00 0.00 2.29
7207 10767 5.227569 TGACCAGTCATACAATGTCAGTT 57.772 39.130 0.00 0.00 34.14 3.16
7253 10816 8.462016 AGTTTTACTGCATTAACATCTCCAATC 58.538 33.333 0.00 0.00 0.00 2.67
7398 10962 9.914131 TCTCTCCGTATCAAAATATAAGATGTG 57.086 33.333 0.00 0.00 0.00 3.21
7422 10986 9.290988 AGTGATCGATAGTTTGATACATACTCT 57.709 33.333 0.00 0.00 37.40 3.24
7511 11076 3.650942 ACCTCCTTTCAGATTGTGTACCA 59.349 43.478 0.00 0.00 0.00 3.25
7563 11128 5.481473 ACTGGTGAATTAGCAATGGAACATT 59.519 36.000 0.00 0.00 36.34 2.71
7574 11139 4.568152 ACAACAACACTGGTGAATTAGC 57.432 40.909 0.00 0.00 43.55 3.09
7654 11223 6.843069 ATTCCAACAAAAGGACAATTTTCG 57.157 33.333 0.00 0.00 34.19 3.46
7669 11238 6.442952 CAACGAACCTATTCAAATTCCAACA 58.557 36.000 0.00 0.00 34.14 3.33
7842 11412 7.497925 AGTTGACATACTTTCCAGAGAAAAC 57.502 36.000 0.00 0.00 41.40 2.43
7850 11420 7.016153 AGACCATAAGTTGACATACTTTCCA 57.984 36.000 7.88 0.00 39.08 3.53
7883 11453 7.052142 ACTCTACTGGAATAAATTACTCGGG 57.948 40.000 0.00 0.00 0.00 5.14
7925 11496 3.633986 CAGCTTCTCAACCTTTTCCTTGT 59.366 43.478 0.00 0.00 0.00 3.16
7926 11497 3.633986 ACAGCTTCTCAACCTTTTCCTTG 59.366 43.478 0.00 0.00 0.00 3.61
8019 11590 6.996282 TGAAAGAAGACGGTTAGGAAGAAAAT 59.004 34.615 0.00 0.00 0.00 1.82
8073 11644 3.072184 ACTCATCCCTTAGCAGGCTAATG 59.928 47.826 13.62 10.96 39.20 1.90
8402 11974 4.163441 TCATGACTCAAGTTTGTCCCAA 57.837 40.909 0.00 0.00 32.67 4.12
8406 11978 5.330295 GCATCATCATGACTCAAGTTTGTC 58.670 41.667 0.00 0.00 30.57 3.18
8450 12022 4.797868 GCAATTATGCGCACATTCTTGTAA 59.202 37.500 14.90 5.08 43.83 2.41
8451 12023 4.350346 GCAATTATGCGCACATTCTTGTA 58.650 39.130 14.90 0.00 43.83 2.41
8453 12025 3.829066 GCAATTATGCGCACATTCTTG 57.171 42.857 14.90 13.48 43.83 3.02
8477 12049 3.440522 GCTGTTTTGGTCACCTATCTTCC 59.559 47.826 0.00 0.00 0.00 3.46
8478 12050 4.072131 TGCTGTTTTGGTCACCTATCTTC 58.928 43.478 0.00 0.00 0.00 2.87
8488 12060 0.865769 ACGATCGTGCTGTTTTGGTC 59.134 50.000 22.06 0.00 0.00 4.02
8550 12124 1.571460 CAGCCAGCAACAAGACGTC 59.429 57.895 7.70 7.70 0.00 4.34
8571 12145 2.895062 CTTCAGCAAAACGCAAAATGC 58.105 42.857 0.00 0.00 46.13 3.56
8702 12360 6.461788 CCTTGCATCTCTCTACCCTTAGTTAC 60.462 46.154 0.00 0.00 0.00 2.50
8754 12412 2.706339 AAATGGCCAAACTTGCACAA 57.294 40.000 10.96 0.00 0.00 3.33
8812 12470 3.632604 TGACTTTTGGAACGCAACCATTA 59.367 39.130 0.00 0.00 37.26 1.90
8815 12473 1.464734 TGACTTTTGGAACGCAACCA 58.535 45.000 0.00 0.00 35.47 3.67
8818 12477 1.599171 CGCATGACTTTTGGAACGCAA 60.599 47.619 0.00 0.00 0.00 4.85
8860 12530 5.777802 CCGAAAGTAGATGACTGCATAGAT 58.222 41.667 0.00 0.00 38.87 1.98
8861 12531 4.499865 GCCGAAAGTAGATGACTGCATAGA 60.500 45.833 0.00 0.00 38.87 1.98
8862 12532 3.738282 GCCGAAAGTAGATGACTGCATAG 59.262 47.826 0.00 0.00 38.87 2.23
8863 12533 3.492656 GGCCGAAAGTAGATGACTGCATA 60.493 47.826 0.00 0.00 38.87 3.14
8864 12534 2.555199 GCCGAAAGTAGATGACTGCAT 58.445 47.619 0.00 0.00 38.87 3.96
8865 12535 1.405526 GGCCGAAAGTAGATGACTGCA 60.406 52.381 0.00 0.00 38.87 4.41
8866 12536 1.291132 GGCCGAAAGTAGATGACTGC 58.709 55.000 0.00 0.00 38.87 4.40
8867 12537 2.271800 GTGGCCGAAAGTAGATGACTG 58.728 52.381 0.00 0.00 38.87 3.51
8868 12538 1.207329 GGTGGCCGAAAGTAGATGACT 59.793 52.381 0.00 0.00 41.56 3.41
8869 12539 1.066430 TGGTGGCCGAAAGTAGATGAC 60.066 52.381 0.00 0.00 0.00 3.06
8870 12540 1.271856 TGGTGGCCGAAAGTAGATGA 58.728 50.000 0.00 0.00 0.00 2.92
8871 12541 2.332063 ATGGTGGCCGAAAGTAGATG 57.668 50.000 0.00 0.00 0.00 2.90
8953 12623 4.329545 TCCCGGGAACAGCAGCAC 62.330 66.667 24.50 0.00 0.00 4.40
9230 12909 2.682494 TACCAGGCCGACCTCACC 60.682 66.667 0.00 0.00 46.34 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.