Multiple sequence alignment - TraesCS4A01G076600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G076600 chr4A 100.000 3368 0 0 1 3368 75460593 75463960 0.000000e+00 6220.0
1 TraesCS4A01G076600 chr4D 91.949 1416 63 22 994 2406 394357947 394359314 0.000000e+00 1936.0
2 TraesCS4A01G076600 chr4D 92.936 453 26 5 281 731 394357221 394357669 0.000000e+00 654.0
3 TraesCS4A01G076600 chr4D 80.755 530 67 15 2842 3365 394359810 394360310 6.820000e-102 381.0
4 TraesCS4A01G076600 chr4D 90.873 252 17 3 2 253 394356976 394357221 1.940000e-87 333.0
5 TraesCS4A01G076600 chr4D 82.637 311 17 16 2444 2753 394359399 394359673 1.210000e-59 241.0
6 TraesCS4A01G076600 chr4D 84.507 71 9 2 3233 3303 480309186 480309118 6.030000e-08 69.4
7 TraesCS4A01G076600 chr4D 90.196 51 5 0 1183 1233 498949328 498949378 2.170000e-07 67.6
8 TraesCS4A01G076600 chr4D 100.000 28 0 0 1945 1972 297072957 297072984 6.000000e-03 52.8
9 TraesCS4A01G076600 chr4B 90.419 1075 76 12 789 1858 483946494 483947546 0.000000e+00 1389.0
10 TraesCS4A01G076600 chr4B 90.909 1001 45 19 1859 2848 483947667 483948632 0.000000e+00 1303.0
11 TraesCS4A01G076600 chr4B 91.600 500 39 2 2 498 483945564 483946063 0.000000e+00 688.0
12 TraesCS4A01G076600 chr4B 95.000 300 14 1 505 804 483946175 483946473 1.410000e-128 470.0
13 TraesCS4A01G076600 chr4B 87.500 264 26 4 2847 3108 483948695 483948953 7.060000e-77 298.0
14 TraesCS4A01G076600 chr2A 94.643 56 3 0 1176 1231 58824656 58824711 1.660000e-13 87.9
15 TraesCS4A01G076600 chr2D 90.476 63 6 0 1169 1231 59627157 59627219 2.150000e-12 84.2
16 TraesCS4A01G076600 chr6D 89.062 64 7 0 1169 1232 90922792 90922855 2.790000e-11 80.5
17 TraesCS4A01G076600 chr6B 89.062 64 7 0 1169 1232 173391851 173391914 2.790000e-11 80.5
18 TraesCS4A01G076600 chr6A 87.500 64 8 0 1169 1232 109135814 109135877 1.300000e-09 75.0
19 TraesCS4A01G076600 chr2B 89.474 57 6 0 1175 1231 92995602 92995658 4.660000e-09 73.1
20 TraesCS4A01G076600 chr5A 78.505 107 17 5 3199 3303 169304699 169304597 7.800000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G076600 chr4A 75460593 75463960 3367 False 6220.0 6220 100.0000 1 3368 1 chr4A.!!$F1 3367
1 TraesCS4A01G076600 chr4D 394356976 394360310 3334 False 709.0 1936 87.8300 2 3365 5 chr4D.!!$F3 3363
2 TraesCS4A01G076600 chr4B 483945564 483948953 3389 False 829.6 1389 91.0856 2 3108 5 chr4B.!!$F1 3106

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
680 795 0.512952 CAGTGCACGTTTAGTCAGCC 59.487 55.0 12.01 0.0 0.00 4.85 F
1253 1472 0.241749 TCTCCGTAACACGCATCGTT 59.758 50.0 0.00 0.0 40.91 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1595 1824 0.041576 GTTCTTTCGGGTGCACGTTC 60.042 55.0 11.45 2.01 34.94 3.95 R
2389 2746 0.179124 GACTCTTCACCGGCTAGCTG 60.179 60.0 17.14 17.14 0.00 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
191 195 2.812011 GGCAGACACTATTCGTTGGTTT 59.188 45.455 0.00 0.00 0.00 3.27
329 333 7.386059 TCATGTTGCTTCAGACTCTAACAATA 58.614 34.615 0.00 0.00 32.58 1.90
367 371 5.292101 CCAACTCTCATCTCAAACGTAATCC 59.708 44.000 0.00 0.00 0.00 3.01
458 462 3.716006 CCAACACCAGTGCTCGCG 61.716 66.667 0.00 0.00 0.00 5.87
509 623 2.127869 CGGCTGCCTGACCTAGCTA 61.128 63.158 17.92 0.00 37.58 3.32
510 624 1.745264 GGCTGCCTGACCTAGCTAG 59.255 63.158 14.20 14.20 37.58 3.42
511 625 1.068921 GCTGCCTGACCTAGCTAGC 59.931 63.158 15.74 6.62 34.70 3.42
512 626 1.680522 GCTGCCTGACCTAGCTAGCA 61.681 60.000 18.83 8.96 34.99 3.49
529 643 1.515519 CAAGATGCATGCACCGCAC 60.516 57.895 25.37 12.03 43.04 5.34
536 650 0.861450 GCATGCACCGCACGTTAATC 60.861 55.000 14.21 0.00 43.04 1.75
564 678 1.792057 CATCGCCGAAACGTGCAAC 60.792 57.895 0.00 0.00 0.00 4.17
624 738 0.810648 ATTATGCACGCACCACTTGG 59.189 50.000 0.00 0.00 42.17 3.61
680 795 0.512952 CAGTGCACGTTTAGTCAGCC 59.487 55.000 12.01 0.00 0.00 4.85
695 810 3.058160 GCCAGTTGAGCCATGCGT 61.058 61.111 0.00 0.00 0.00 5.24
804 955 2.082366 GCACGTTGCCATTTGCTCG 61.082 57.895 0.00 0.00 42.00 5.03
848 1004 9.832445 ATGAATATTTATACGAGTCCAACTTGT 57.168 29.630 5.38 5.38 44.61 3.16
850 1006 9.916397 GAATATTTATACGAGTCCAACTTGTTG 57.084 33.333 5.36 6.52 39.77 3.33
851 1007 5.600908 TTTATACGAGTCCAACTTGTTGC 57.399 39.130 7.89 0.00 39.77 4.17
852 1008 2.902705 TACGAGTCCAACTTGTTGCT 57.097 45.000 7.89 1.32 39.77 3.91
853 1009 2.902705 ACGAGTCCAACTTGTTGCTA 57.097 45.000 7.89 0.00 39.77 3.49
854 1010 2.755650 ACGAGTCCAACTTGTTGCTAG 58.244 47.619 7.89 4.44 39.77 3.42
855 1011 1.461127 CGAGTCCAACTTGTTGCTAGC 59.539 52.381 8.10 8.10 0.00 3.42
858 1014 3.929610 GAGTCCAACTTGTTGCTAGCTAG 59.070 47.826 16.84 16.84 0.00 3.42
896 1060 7.438459 ACTTTAAGCTGTCTATATAACCTTGCG 59.562 37.037 0.00 0.00 0.00 4.85
978 1197 1.103398 GCGGCAGTGCTGGGATATTT 61.103 55.000 25.02 0.00 35.15 1.40
980 1199 1.066002 CGGCAGTGCTGGGATATTTTG 59.934 52.381 16.66 0.00 0.00 2.44
983 1202 3.316308 GGCAGTGCTGGGATATTTTGTAG 59.684 47.826 16.11 0.00 0.00 2.74
989 1208 5.067674 GTGCTGGGATATTTTGTAGCATCAA 59.932 40.000 0.00 0.00 42.32 2.57
990 1209 5.067674 TGCTGGGATATTTTGTAGCATCAAC 59.932 40.000 0.00 0.00 36.37 3.18
991 1210 5.749596 TGGGATATTTTGTAGCATCAACG 57.250 39.130 0.00 0.00 0.00 4.10
1023 1242 1.001181 GAGCCTCTCAGAGATCATGGC 59.999 57.143 17.21 17.21 39.19 4.40
1044 1263 1.647629 GAGCTGCTTGCCGATGATG 59.352 57.895 2.53 0.00 44.23 3.07
1246 1465 1.510623 CGTCCGTCTCCGTAACACG 60.511 63.158 0.00 0.00 42.11 4.49
1249 1468 1.153901 CCGTCTCCGTAACACGCAT 60.154 57.895 0.00 0.00 40.91 4.73
1250 1469 1.138047 CCGTCTCCGTAACACGCATC 61.138 60.000 0.00 0.00 40.91 3.91
1251 1470 1.461317 CGTCTCCGTAACACGCATCG 61.461 60.000 0.00 0.00 40.91 3.84
1252 1471 0.455633 GTCTCCGTAACACGCATCGT 60.456 55.000 0.00 0.00 40.91 3.73
1253 1472 0.241749 TCTCCGTAACACGCATCGTT 59.758 50.000 0.00 0.00 40.91 3.85
1254 1473 1.468127 TCTCCGTAACACGCATCGTTA 59.532 47.619 0.00 0.00 40.91 3.18
1255 1474 2.097954 TCTCCGTAACACGCATCGTTAT 59.902 45.455 0.00 0.00 40.91 1.89
1256 1475 2.855963 CTCCGTAACACGCATCGTTATT 59.144 45.455 0.00 0.00 40.91 1.40
1257 1476 4.026293 TCCGTAACACGCATCGTTATTA 57.974 40.909 0.00 0.00 40.91 0.98
1258 1477 3.790820 TCCGTAACACGCATCGTTATTAC 59.209 43.478 10.72 10.72 40.91 1.89
1261 1480 0.925466 ACACGCATCGTTATTACCGC 59.075 50.000 0.00 0.00 38.32 5.68
1274 1493 5.558273 CGTTATTACCGCATGCTTTCTTAGG 60.558 44.000 17.13 10.04 0.00 2.69
1279 1502 1.329906 CGCATGCTTTCTTAGGCTCTG 59.670 52.381 17.13 0.00 0.00 3.35
1293 1516 1.996191 GGCTCTGAAGTGAACATCGTC 59.004 52.381 0.00 0.00 0.00 4.20
1294 1517 1.651138 GCTCTGAAGTGAACATCGTCG 59.349 52.381 0.00 0.00 0.00 5.12
1295 1518 2.922758 GCTCTGAAGTGAACATCGTCGT 60.923 50.000 0.00 0.00 0.00 4.34
1296 1519 2.658802 CTCTGAAGTGAACATCGTCGTG 59.341 50.000 0.00 0.00 0.00 4.35
1297 1520 1.721389 CTGAAGTGAACATCGTCGTGG 59.279 52.381 0.00 0.00 0.00 4.94
1298 1521 1.338655 TGAAGTGAACATCGTCGTGGA 59.661 47.619 0.00 0.00 0.00 4.02
1299 1522 1.719780 GAAGTGAACATCGTCGTGGAC 59.280 52.381 0.00 0.00 0.00 4.02
1309 1532 2.805277 GTCGTGGACGTACTTGTGG 58.195 57.895 0.00 0.00 40.80 4.17
1402 1625 4.113617 CTCAACTCGGTGAGGGGA 57.886 61.111 4.04 0.00 41.21 4.81
1532 1755 1.066071 GTTCCTTCCTTCCTTCCCTCG 60.066 57.143 0.00 0.00 0.00 4.63
1533 1756 0.412244 TCCTTCCTTCCTTCCCTCGA 59.588 55.000 0.00 0.00 0.00 4.04
1548 1772 1.588404 CCTCGATCGAATTCACAACCG 59.412 52.381 19.92 3.01 0.00 4.44
1571 1800 4.571176 GCTCCAACATAGCTAACCAACTAC 59.429 45.833 0.00 0.00 37.01 2.73
1572 1801 5.730550 CTCCAACATAGCTAACCAACTACA 58.269 41.667 0.00 0.00 0.00 2.74
1573 1802 5.730550 TCCAACATAGCTAACCAACTACAG 58.269 41.667 0.00 0.00 0.00 2.74
1574 1803 5.247564 TCCAACATAGCTAACCAACTACAGT 59.752 40.000 0.00 0.00 0.00 3.55
1575 1804 6.438108 TCCAACATAGCTAACCAACTACAGTA 59.562 38.462 0.00 0.00 0.00 2.74
1576 1805 6.534079 CCAACATAGCTAACCAACTACAGTAC 59.466 42.308 0.00 0.00 0.00 2.73
1595 1824 8.561738 ACAGTACCTACCAAATAATTCAGTTG 57.438 34.615 0.00 0.00 31.96 3.16
1596 1825 8.380099 ACAGTACCTACCAAATAATTCAGTTGA 58.620 33.333 0.00 0.00 34.06 3.18
1597 1826 9.226606 CAGTACCTACCAAATAATTCAGTTGAA 57.773 33.333 0.00 0.00 34.06 2.69
1598 1827 9.227777 AGTACCTACCAAATAATTCAGTTGAAC 57.772 33.333 0.00 0.00 34.06 3.18
1646 1875 4.335416 ACCGTACTACCAGTACTGCTTTA 58.665 43.478 17.86 7.07 46.68 1.85
1647 1876 4.156739 ACCGTACTACCAGTACTGCTTTAC 59.843 45.833 17.86 13.03 46.68 2.01
1648 1877 4.439289 CCGTACTACCAGTACTGCTTTACC 60.439 50.000 17.86 2.91 46.68 2.85
1654 1883 2.029290 CCAGTACTGCTTTACCGAGTGT 60.029 50.000 17.86 0.00 0.00 3.55
1659 1888 4.431661 ACTGCTTTACCGAGTGTAGTAC 57.568 45.455 0.00 0.00 0.00 2.73
1660 1889 3.120060 ACTGCTTTACCGAGTGTAGTACG 60.120 47.826 0.00 0.00 0.00 3.67
1661 1890 2.180397 GCTTTACCGAGTGTAGTACGC 58.820 52.381 5.68 5.68 0.00 4.42
1667 1896 2.068839 CGAGTGTAGTACGCGTACTG 57.931 55.000 45.70 30.93 45.73 2.74
1689 1918 2.798976 TTTGTTGGCATGTTCAGAGC 57.201 45.000 0.00 0.00 0.00 4.09
1704 1933 2.760385 AGCGGAGGGCCTGACTAC 60.760 66.667 12.95 0.00 45.17 2.73
1794 2023 0.160813 CGTTCGACAACATCACCGTG 59.839 55.000 0.00 0.00 32.14 4.94
1821 2050 1.737008 GAGGTTCAAGGACGTCGGC 60.737 63.158 9.92 0.00 0.00 5.54
1885 2234 5.421277 TCTACTAGACTGAGCACTACTGTC 58.579 45.833 0.00 0.00 36.79 3.51
1924 2277 0.953471 TACGCAACGAAAGCCAGCAT 60.953 50.000 0.00 0.00 0.00 3.79
1942 2295 3.645884 GCATATCCAACCATGCATGAAC 58.354 45.455 28.31 0.00 45.51 3.18
1943 2296 3.553508 GCATATCCAACCATGCATGAACC 60.554 47.826 28.31 0.00 45.51 3.62
1944 2297 1.105457 ATCCAACCATGCATGAACCG 58.895 50.000 28.31 13.38 0.00 4.44
1945 2298 1.153784 CCAACCATGCATGAACCGC 60.154 57.895 28.31 0.00 0.00 5.68
1946 2299 1.585517 CAACCATGCATGAACCGCA 59.414 52.632 28.31 0.00 44.94 5.69
2184 2541 1.764454 GAAGGGCCTCCTCTCCTCC 60.764 68.421 6.46 0.00 44.07 4.30
2281 2638 4.996976 GCTTCCTCTGCGACTTCA 57.003 55.556 0.00 0.00 0.00 3.02
2296 2653 3.950794 TTCAGCGACGCCATGGTCC 62.951 63.158 17.79 1.81 33.30 4.46
2411 2826 1.804372 GCTAGCCGGTGAAGAGTCATG 60.804 57.143 2.29 0.00 35.80 3.07
2418 2833 1.337260 GGTGAAGAGTCATGTCGTGCT 60.337 52.381 0.00 0.00 35.80 4.40
2421 2836 2.802247 TGAAGAGTCATGTCGTGCTTTG 59.198 45.455 0.00 0.00 0.00 2.77
2422 2837 1.151668 AGAGTCATGTCGTGCTTTGC 58.848 50.000 0.00 0.00 0.00 3.68
2423 2838 0.867746 GAGTCATGTCGTGCTTTGCA 59.132 50.000 0.00 0.00 35.60 4.08
2432 2847 4.542075 TGCTTTGCACGTGTACCA 57.458 50.000 18.38 7.05 31.71 3.25
2433 2848 3.014037 TGCTTTGCACGTGTACCAT 57.986 47.368 18.38 0.00 31.71 3.55
2434 2849 0.590682 TGCTTTGCACGTGTACCATG 59.409 50.000 18.38 2.24 31.71 3.66
2435 2850 0.109781 GCTTTGCACGTGTACCATGG 60.110 55.000 18.38 11.19 0.00 3.66
2436 2851 1.234821 CTTTGCACGTGTACCATGGT 58.765 50.000 23.55 23.55 0.00 3.55
2437 2852 1.196808 CTTTGCACGTGTACCATGGTC 59.803 52.381 23.76 13.76 0.00 4.02
2438 2853 0.106894 TTGCACGTGTACCATGGTCA 59.893 50.000 23.76 16.33 0.00 4.02
2453 2874 1.000394 TGGTCAGGATGTGTACGTGTG 60.000 52.381 0.00 0.00 37.40 3.82
2480 2901 2.795470 GTGTGAAAGTTGTCCTCTCGTC 59.205 50.000 0.00 0.00 0.00 4.20
2481 2902 2.693591 TGTGAAAGTTGTCCTCTCGTCT 59.306 45.455 0.00 0.00 0.00 4.18
2482 2903 3.132289 TGTGAAAGTTGTCCTCTCGTCTT 59.868 43.478 0.00 0.00 0.00 3.01
2485 2906 3.372660 AAGTTGTCCTCTCGTCTTGTC 57.627 47.619 0.00 0.00 0.00 3.18
2491 2912 1.002888 TCCTCTCGTCTTGTCTACCGT 59.997 52.381 0.00 0.00 0.00 4.83
2492 2913 1.811359 CCTCTCGTCTTGTCTACCGTT 59.189 52.381 0.00 0.00 0.00 4.44
2493 2914 2.228343 CCTCTCGTCTTGTCTACCGTTT 59.772 50.000 0.00 0.00 0.00 3.60
2494 2915 3.490399 CTCTCGTCTTGTCTACCGTTTC 58.510 50.000 0.00 0.00 0.00 2.78
2499 2920 4.037208 TCGTCTTGTCTACCGTTTCTTTCT 59.963 41.667 0.00 0.00 0.00 2.52
2530 2951 2.158325 AGCTAGCTAGGATTCTCCAGCT 60.158 50.000 17.69 17.91 45.83 4.24
2557 2978 0.749649 ATAAGCTGGCTCGTCCTCTG 59.250 55.000 0.00 0.00 35.26 3.35
2560 2981 1.446966 GCTGGCTCGTCCTCTGAAC 60.447 63.158 0.00 0.00 35.26 3.18
2587 3008 3.503363 GCATCGCAGTGGGACAGC 61.503 66.667 12.67 15.27 41.80 4.40
2632 3068 1.619332 GGTAGTACCTATCAGGGCTGC 59.381 57.143 12.41 0.00 40.58 5.25
2672 3112 8.139989 GCAAAATGAATAATGGAATCTGTAGCT 58.860 33.333 0.00 0.00 0.00 3.32
2675 3115 8.558973 AATGAATAATGGAATCTGTAGCTAGC 57.441 34.615 6.62 6.62 0.00 3.42
2680 3120 1.492720 GAATCTGTAGCTAGCCGCAC 58.507 55.000 12.13 7.93 42.61 5.34
2702 3142 1.521681 GTCTGCATCGTGCCCTACC 60.522 63.158 7.38 0.00 44.23 3.18
2733 3173 3.811497 TGATGTGCACTTGAAGTCTTGAG 59.189 43.478 19.41 0.00 0.00 3.02
2755 3195 3.429881 GCAAGCAAGTTCAGTTAAATGCC 59.570 43.478 0.00 0.00 34.33 4.40
2756 3196 3.942130 AGCAAGTTCAGTTAAATGCCC 57.058 42.857 0.00 0.00 34.33 5.36
2772 3212 3.644861 CCCAACGGCTCCTTAAGTT 57.355 52.632 0.97 0.00 0.00 2.66
2797 3237 1.540363 GGACTTTCAGGTCTTGCGTCA 60.540 52.381 0.00 0.00 36.55 4.35
2798 3238 2.210116 GACTTTCAGGTCTTGCGTCAA 58.790 47.619 0.00 0.00 33.81 3.18
2839 3283 3.945434 CGTGGCTCATGATGCGGC 61.945 66.667 1.67 1.67 0.00 6.53
2840 3284 2.825387 GTGGCTCATGATGCGGCA 60.825 61.111 7.62 7.62 35.23 5.69
2844 3352 0.953727 GGCTCATGATGCGGCAATTA 59.046 50.000 6.82 0.00 0.00 1.40
2861 3369 1.286354 TTAGCGTTGCCGTACTGTGC 61.286 55.000 0.00 0.00 36.15 4.57
2866 3374 1.957186 TTGCCGTACTGTGCCGAAC 60.957 57.895 3.68 0.00 0.00 3.95
2909 3417 1.154727 GCAAAAGACCGTACGTGCG 60.155 57.895 19.61 19.61 0.00 5.34
2939 3448 2.975410 TCTTGCTGCTGAATTTGACG 57.025 45.000 0.00 0.00 0.00 4.35
2991 3500 1.535462 CAGGTTGTCCGGTGTTCATTC 59.465 52.381 0.00 0.00 39.05 2.67
3006 3515 0.676466 CATTCAAGGGCGTGGCTACA 60.676 55.000 0.00 0.00 0.00 2.74
3022 3531 3.259064 GCTACATGCCAGTCGTCTAAAA 58.741 45.455 0.00 0.00 35.15 1.52
3023 3532 3.682858 GCTACATGCCAGTCGTCTAAAAA 59.317 43.478 0.00 0.00 35.15 1.94
3070 3583 1.739093 GCACGATGCGAAATCGACGA 61.739 55.000 22.69 0.00 43.59 4.20
3079 3592 1.004200 AAATCGACGACCCCGCTTT 60.004 52.632 0.00 0.00 39.95 3.51
3080 3593 1.017701 AAATCGACGACCCCGCTTTC 61.018 55.000 0.00 0.00 39.95 2.62
3086 3599 0.108019 ACGACCCCGCTTTCTTCTTT 59.892 50.000 0.00 0.00 39.95 2.52
3087 3600 0.517316 CGACCCCGCTTTCTTCTTTG 59.483 55.000 0.00 0.00 0.00 2.77
3117 3630 0.114560 TCCTTCTCCCTTCTCCACGT 59.885 55.000 0.00 0.00 0.00 4.49
3124 3637 0.107831 CCCTTCTCCACGTTGAACCA 59.892 55.000 0.00 0.00 0.00 3.67
3128 3641 1.599797 CTCCACGTTGAACCACCCC 60.600 63.158 0.00 0.00 0.00 4.95
3131 3644 3.868985 ACGTTGAACCACCCCGCT 61.869 61.111 0.00 0.00 0.00 5.52
3184 3698 4.648626 GCTGCTGGTGCTCCCACA 62.649 66.667 1.59 0.00 43.88 4.17
3218 3732 2.683933 TCCTCTCTGGAACCGCCC 60.684 66.667 0.00 0.00 42.94 6.13
3234 3748 2.358247 CCCCCAACGTCGGTCTTG 60.358 66.667 0.00 0.00 0.00 3.02
3236 3750 3.047877 CCCAACGTCGGTCTTGCC 61.048 66.667 0.00 0.00 0.00 4.52
3263 3777 3.253061 GGCCATCCCTCTAGCCCC 61.253 72.222 0.00 0.00 39.60 5.80
3266 3780 3.631046 CATCCCTCTAGCCCCGGC 61.631 72.222 0.00 0.00 42.33 6.13
3284 3798 1.137404 CGCCGGCCAAGATTTTCTG 59.863 57.895 23.46 0.00 0.00 3.02
3285 3799 1.586154 CGCCGGCCAAGATTTTCTGT 61.586 55.000 23.46 0.00 0.00 3.41
3304 3818 3.276846 GCGAAGTTGCACCACCGT 61.277 61.111 0.00 0.00 34.15 4.83
3313 3827 4.562425 CACCACCGTGCCACCACT 62.562 66.667 0.00 0.00 39.86 4.00
3314 3828 4.562425 ACCACCGTGCCACCACTG 62.562 66.667 0.00 0.00 39.86 3.66
3334 3848 4.636435 CCCACCACCGCCGTTCTT 62.636 66.667 0.00 0.00 0.00 2.52
3335 3849 3.047877 CCACCACCGCCGTTCTTC 61.048 66.667 0.00 0.00 0.00 2.87
3336 3850 2.030562 CACCACCGCCGTTCTTCT 59.969 61.111 0.00 0.00 0.00 2.85
3337 3851 2.030562 ACCACCGCCGTTCTTCTG 59.969 61.111 0.00 0.00 0.00 3.02
3338 3852 3.423154 CCACCGCCGTTCTTCTGC 61.423 66.667 0.00 0.00 0.00 4.26
3351 3865 4.470581 TCTGCCCCCATCCCCCAT 62.471 66.667 0.00 0.00 0.00 4.00
3352 3866 3.907130 CTGCCCCCATCCCCCATC 61.907 72.222 0.00 0.00 0.00 3.51
3365 3879 6.212773 CCATCCCCCATCCTAAGATAGATAA 58.787 44.000 0.00 0.00 0.00 1.75
3366 3880 6.853983 CCATCCCCCATCCTAAGATAGATAAT 59.146 42.308 0.00 0.00 0.00 1.28
3367 3881 8.019050 CCATCCCCCATCCTAAGATAGATAATA 58.981 40.741 0.00 0.00 0.00 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 127 3.716353 ACCCTCATACACATTGATAGGCA 59.284 43.478 0.00 0.00 0.00 4.75
135 136 1.559682 GTCCACCACCCTCATACACAT 59.440 52.381 0.00 0.00 0.00 3.21
165 166 0.462047 CGAATAGTGTCTGCCACCCC 60.462 60.000 0.00 0.00 45.74 4.95
166 167 0.249398 ACGAATAGTGTCTGCCACCC 59.751 55.000 0.00 0.00 45.74 4.61
167 168 1.732259 CAACGAATAGTGTCTGCCACC 59.268 52.381 0.00 0.00 45.74 4.61
175 179 5.529430 TGATGTGAAAACCAACGAATAGTGT 59.471 36.000 0.00 0.00 0.00 3.55
191 195 3.673323 CGTCGGATCTTCAGTGATGTGAA 60.673 47.826 5.97 0.00 35.16 3.18
256 260 0.321564 TCGTTGGATTGGCTGTCCAG 60.322 55.000 10.50 2.73 45.85 3.86
308 312 6.398918 TCCTATTGTTAGAGTCTGAAGCAAC 58.601 40.000 1.86 0.00 0.00 4.17
329 333 2.204291 TTGGGGCCTGACCATCCT 60.204 61.111 0.84 0.00 42.05 3.24
367 371 4.556104 GCAAGATTGACATGAATGGGATCG 60.556 45.833 0.00 0.00 0.00 3.69
425 429 2.224281 TGTTGGTGTGTTAGGCAGAGAG 60.224 50.000 0.00 0.00 0.00 3.20
463 467 3.250323 CGTGACAGAGATGCGGCG 61.250 66.667 0.51 0.51 0.00 6.46
499 504 2.110578 TGCATCTTGCTAGCTAGGTCA 58.889 47.619 23.20 15.84 45.31 4.02
500 505 2.898729 TGCATCTTGCTAGCTAGGTC 57.101 50.000 23.20 13.85 45.31 3.85
509 623 3.060020 GCGGTGCATGCATCTTGCT 62.060 57.895 27.49 0.00 45.31 3.91
510 624 2.581409 GCGGTGCATGCATCTTGC 60.581 61.111 27.49 20.49 45.29 4.01
511 625 1.515519 GTGCGGTGCATGCATCTTG 60.516 57.895 27.49 14.79 45.34 3.02
512 626 2.879907 GTGCGGTGCATGCATCTT 59.120 55.556 27.49 0.00 45.34 2.40
536 650 0.800683 TTCGGCGATGCAAGTCTACG 60.801 55.000 11.76 0.00 0.00 3.51
580 694 5.084818 AGCACCAACCAAATTAATTAGGC 57.915 39.130 0.01 0.00 0.00 3.93
624 738 5.631096 GCTGCTAATTTTCTGTTCTGAAACC 59.369 40.000 0.00 0.00 35.91 3.27
680 795 2.177531 GCACGCATGGCTCAACTG 59.822 61.111 0.00 0.00 0.00 3.16
706 821 1.006832 GGATTACTGCGATTGTGCGT 58.993 50.000 0.00 0.00 37.81 5.24
800 915 0.158928 CGTTTGACTGTTCGTCGAGC 59.841 55.000 1.65 1.65 45.87 5.03
804 955 5.756950 TTCATATCGTTTGACTGTTCGTC 57.243 39.130 0.00 0.00 43.14 4.20
829 985 5.302360 AGCAACAAGTTGGACTCGTATAAA 58.698 37.500 14.16 0.00 40.74 1.40
846 1002 4.098044 GGTGAGTGATACTAGCTAGCAACA 59.902 45.833 20.91 10.25 0.00 3.33
848 1004 4.098044 GTGGTGAGTGATACTAGCTAGCAA 59.902 45.833 20.91 9.70 0.00 3.91
850 1006 3.886505 AGTGGTGAGTGATACTAGCTAGC 59.113 47.826 20.91 6.62 0.00 3.42
851 1007 6.458232 AAAGTGGTGAGTGATACTAGCTAG 57.542 41.667 19.44 19.44 0.00 3.42
852 1008 7.416438 GCTTAAAGTGGTGAGTGATACTAGCTA 60.416 40.741 0.00 0.00 0.00 3.32
853 1009 6.628398 GCTTAAAGTGGTGAGTGATACTAGCT 60.628 42.308 0.00 0.00 0.00 3.32
854 1010 5.520649 GCTTAAAGTGGTGAGTGATACTAGC 59.479 44.000 0.00 0.00 0.00 3.42
855 1011 6.754209 CAGCTTAAAGTGGTGAGTGATACTAG 59.246 42.308 0.00 0.00 35.20 2.57
858 1014 5.238583 ACAGCTTAAAGTGGTGAGTGATAC 58.761 41.667 0.00 0.00 36.81 2.24
896 1060 1.022735 TCGATCTCTCCGTGCTTACC 58.977 55.000 0.00 0.00 0.00 2.85
904 1068 1.600663 CCCGTTTGATCGATCTCTCCG 60.601 57.143 25.02 19.44 0.00 4.63
960 1179 1.066002 CAAAATATCCCAGCACTGCCG 59.934 52.381 0.00 0.00 0.00 5.69
978 1197 6.037062 CCATTTCTGATACGTTGATGCTACAA 59.963 38.462 0.00 0.00 0.00 2.41
980 1199 5.753438 TCCATTTCTGATACGTTGATGCTAC 59.247 40.000 0.00 0.00 0.00 3.58
983 1202 4.553547 GCTCCATTTCTGATACGTTGATGC 60.554 45.833 0.00 0.00 0.00 3.91
989 1208 3.034635 AGAGGCTCCATTTCTGATACGT 58.965 45.455 11.71 0.00 0.00 3.57
990 1209 3.068732 TGAGAGGCTCCATTTCTGATACG 59.931 47.826 11.71 0.00 0.00 3.06
991 1210 4.343526 TCTGAGAGGCTCCATTTCTGATAC 59.656 45.833 11.71 0.00 0.00 2.24
1037 1256 1.197036 GCAGCACCATGATCATCATCG 59.803 52.381 4.86 0.00 34.28 3.84
1044 1263 1.432251 GCACAGCAGCACCATGATC 59.568 57.895 0.00 0.00 0.00 2.92
1078 1297 4.687215 GTCGCTCAGCTGGCCACA 62.687 66.667 15.13 0.00 0.00 4.17
1171 1390 4.301027 GGAGGCGCCCATCCGTAG 62.301 72.222 26.15 0.00 0.00 3.51
1246 1465 1.531149 AGCATGCGGTAATAACGATGC 59.469 47.619 19.67 19.67 41.08 3.91
1249 1468 3.527533 AGAAAGCATGCGGTAATAACGA 58.472 40.909 13.01 0.00 0.00 3.85
1250 1469 3.944422 AGAAAGCATGCGGTAATAACG 57.056 42.857 13.01 0.00 0.00 3.18
1251 1470 5.748592 CCTAAGAAAGCATGCGGTAATAAC 58.251 41.667 13.01 0.00 0.00 1.89
1252 1471 4.274950 GCCTAAGAAAGCATGCGGTAATAA 59.725 41.667 13.01 0.00 0.00 1.40
1253 1472 3.813166 GCCTAAGAAAGCATGCGGTAATA 59.187 43.478 13.01 3.85 0.00 0.98
1254 1473 2.618709 GCCTAAGAAAGCATGCGGTAAT 59.381 45.455 13.01 2.76 0.00 1.89
1255 1474 2.014128 GCCTAAGAAAGCATGCGGTAA 58.986 47.619 13.01 0.00 0.00 2.85
1256 1475 1.209504 AGCCTAAGAAAGCATGCGGTA 59.790 47.619 13.01 0.62 0.00 4.02
1257 1476 0.035056 AGCCTAAGAAAGCATGCGGT 60.035 50.000 13.01 3.59 0.00 5.68
1258 1477 0.659957 GAGCCTAAGAAAGCATGCGG 59.340 55.000 13.01 6.61 0.00 5.69
1261 1480 4.094590 CACTTCAGAGCCTAAGAAAGCATG 59.905 45.833 0.00 0.00 0.00 4.06
1274 1493 1.651138 CGACGATGTTCACTTCAGAGC 59.349 52.381 0.00 0.00 0.00 4.09
1279 1502 1.719780 GTCCACGACGATGTTCACTTC 59.280 52.381 0.00 0.00 0.00 3.01
1293 1516 0.669318 ATGCCACAAGTACGTCCACG 60.669 55.000 0.00 0.00 46.33 4.94
1294 1517 0.796312 CATGCCACAAGTACGTCCAC 59.204 55.000 0.00 0.00 0.00 4.02
1295 1518 0.953471 GCATGCCACAAGTACGTCCA 60.953 55.000 6.36 0.00 0.00 4.02
1296 1519 0.953471 TGCATGCCACAAGTACGTCC 60.953 55.000 16.68 0.00 0.00 4.79
1297 1520 1.086696 ATGCATGCCACAAGTACGTC 58.913 50.000 16.68 0.00 0.00 4.34
1298 1521 0.804364 CATGCATGCCACAAGTACGT 59.196 50.000 14.93 0.00 0.00 3.57
1299 1522 3.609604 CATGCATGCCACAAGTACG 57.390 52.632 14.93 0.00 0.00 3.67
1532 1755 1.327764 GGAGCGGTTGTGAATTCGATC 59.672 52.381 0.04 0.00 37.32 3.69
1533 1756 1.338674 TGGAGCGGTTGTGAATTCGAT 60.339 47.619 0.04 0.00 0.00 3.59
1548 1772 3.610911 AGTTGGTTAGCTATGTTGGAGC 58.389 45.455 0.00 0.00 40.42 4.70
1571 1800 8.786826 TCAACTGAATTATTTGGTAGGTACTG 57.213 34.615 0.00 0.00 41.52 2.74
1572 1801 9.227777 GTTCAACTGAATTATTTGGTAGGTACT 57.772 33.333 0.00 0.00 38.38 2.73
1573 1802 8.173130 CGTTCAACTGAATTATTTGGTAGGTAC 58.827 37.037 0.00 0.00 36.33 3.34
1574 1803 7.879160 ACGTTCAACTGAATTATTTGGTAGGTA 59.121 33.333 0.00 0.00 36.33 3.08
1575 1804 6.713450 ACGTTCAACTGAATTATTTGGTAGGT 59.287 34.615 0.00 0.00 36.33 3.08
1576 1805 7.021196 CACGTTCAACTGAATTATTTGGTAGG 58.979 38.462 0.00 0.00 36.33 3.18
1595 1824 0.041576 GTTCTTTCGGGTGCACGTTC 60.042 55.000 11.45 2.01 34.94 3.95
1596 1825 0.463116 AGTTCTTTCGGGTGCACGTT 60.463 50.000 11.45 0.00 34.94 3.99
1597 1826 1.145377 AGTTCTTTCGGGTGCACGT 59.855 52.632 11.45 0.00 34.94 4.49
1598 1827 1.157870 ACAGTTCTTTCGGGTGCACG 61.158 55.000 11.45 0.00 0.00 5.34
1646 1875 0.721718 GTACGCGTACTACACTCGGT 59.278 55.000 35.66 2.03 39.67 4.69
1647 1876 1.002366 AGTACGCGTACTACACTCGG 58.998 55.000 42.04 0.00 43.98 4.63
1648 1877 1.655597 TCAGTACGCGTACTACACTCG 59.344 52.381 41.99 30.51 43.98 4.18
1654 1883 4.622313 CCAACAAAATCAGTACGCGTACTA 59.378 41.667 41.99 30.94 43.98 1.82
1659 1888 1.069568 TGCCAACAAAATCAGTACGCG 60.070 47.619 3.53 3.53 0.00 6.01
1660 1889 2.697431 TGCCAACAAAATCAGTACGC 57.303 45.000 0.00 0.00 0.00 4.42
1661 1890 4.159377 ACATGCCAACAAAATCAGTACG 57.841 40.909 0.00 0.00 0.00 3.67
1667 1896 3.676646 GCTCTGAACATGCCAACAAAATC 59.323 43.478 0.00 0.00 0.00 2.17
1689 1918 1.828660 ATCGTAGTCAGGCCCTCCG 60.829 63.158 0.00 0.00 37.47 4.63
1794 2023 4.142138 ACGTCCTTGAACCTCTGTATGATC 60.142 45.833 0.00 0.00 0.00 2.92
1821 2050 2.542595 GACCACGTCTGTTGTGTTAAGG 59.457 50.000 0.00 0.00 35.56 2.69
1863 2212 5.424757 AGACAGTAGTGCTCAGTCTAGTAG 58.575 45.833 0.00 0.00 37.75 2.57
1885 2234 6.906678 TGCGTACAATACAACGTGTACTATAG 59.093 38.462 11.07 0.00 45.16 1.31
1924 2277 2.296792 CGGTTCATGCATGGTTGGATA 58.703 47.619 25.97 2.13 31.94 2.59
1944 2297 3.446570 GTGTGGGCTCCTGCATGC 61.447 66.667 11.82 11.82 41.91 4.06
1945 2298 2.881539 ATCGTGTGGGCTCCTGCATG 62.882 60.000 0.00 0.00 41.91 4.06
1946 2299 2.599645 GATCGTGTGGGCTCCTGCAT 62.600 60.000 0.00 0.00 41.91 3.96
1947 2300 3.315142 GATCGTGTGGGCTCCTGCA 62.315 63.158 0.00 0.00 41.91 4.41
2184 2541 3.827898 GAGACGAGGCCCTGGTCG 61.828 72.222 18.69 10.33 42.56 4.79
2389 2746 0.179124 GACTCTTCACCGGCTAGCTG 60.179 60.000 17.14 17.14 0.00 4.24
2427 2842 3.737047 CGTACACATCCTGACCATGGTAC 60.737 52.174 19.80 12.18 31.40 3.34
2428 2843 2.429250 CGTACACATCCTGACCATGGTA 59.571 50.000 19.80 1.52 0.00 3.25
2429 2844 1.207089 CGTACACATCCTGACCATGGT 59.793 52.381 19.89 19.89 0.00 3.55
2430 2845 1.207089 ACGTACACATCCTGACCATGG 59.793 52.381 11.19 11.19 0.00 3.66
2431 2846 2.270923 CACGTACACATCCTGACCATG 58.729 52.381 0.00 0.00 0.00 3.66
2432 2847 1.899814 ACACGTACACATCCTGACCAT 59.100 47.619 0.00 0.00 0.00 3.55
2433 2848 1.000394 CACACGTACACATCCTGACCA 60.000 52.381 0.00 0.00 0.00 4.02
2434 2849 1.710013 CACACGTACACATCCTGACC 58.290 55.000 0.00 0.00 0.00 4.02
2435 2850 1.068474 GCACACGTACACATCCTGAC 58.932 55.000 0.00 0.00 0.00 3.51
2436 2851 0.388006 CGCACACGTACACATCCTGA 60.388 55.000 0.00 0.00 33.53 3.86
2437 2852 2.070049 CGCACACGTACACATCCTG 58.930 57.895 0.00 0.00 33.53 3.86
2438 2853 4.571250 CGCACACGTACACATCCT 57.429 55.556 0.00 0.00 33.53 3.24
2453 2874 1.593793 GGACAACTTTCACACGAACGC 60.594 52.381 0.00 0.00 0.00 4.84
2480 2901 4.150098 CCGAAGAAAGAAACGGTAGACAAG 59.850 45.833 0.00 0.00 40.42 3.16
2481 2902 4.053295 CCGAAGAAAGAAACGGTAGACAA 58.947 43.478 0.00 0.00 40.42 3.18
2482 2903 3.553508 CCCGAAGAAAGAAACGGTAGACA 60.554 47.826 0.00 0.00 43.22 3.41
2485 2906 3.036075 ACCCGAAGAAAGAAACGGTAG 57.964 47.619 0.00 0.00 43.22 3.18
2491 2912 3.551846 AGCTTGAACCCGAAGAAAGAAA 58.448 40.909 0.00 0.00 0.00 2.52
2492 2913 3.208747 AGCTTGAACCCGAAGAAAGAA 57.791 42.857 0.00 0.00 0.00 2.52
2493 2914 2.930826 AGCTTGAACCCGAAGAAAGA 57.069 45.000 0.00 0.00 0.00 2.52
2494 2915 2.416893 GCTAGCTTGAACCCGAAGAAAG 59.583 50.000 7.70 0.00 0.00 2.62
2499 2920 1.480954 CCTAGCTAGCTTGAACCCGAA 59.519 52.381 24.88 0.00 0.00 4.30
2530 2951 3.563223 ACGAGCCAGCTTATTACTCCTA 58.437 45.455 0.00 0.00 0.00 2.94
2587 3008 1.954146 CCGTCAACCGACACACTGG 60.954 63.158 0.00 0.00 42.74 4.00
2632 3068 0.643310 TTTTGCGCGCTACTATCACG 59.357 50.000 33.29 0.00 0.00 4.35
2672 3112 2.126071 GCAGACTTCGTGCGGCTA 60.126 61.111 0.00 0.00 0.00 3.93
2673 3113 3.596066 ATGCAGACTTCGTGCGGCT 62.596 57.895 0.00 0.00 44.35 5.52
2674 3114 3.088500 GATGCAGACTTCGTGCGGC 62.089 63.158 0.00 0.00 44.35 6.53
2675 3115 2.792290 CGATGCAGACTTCGTGCGG 61.792 63.158 0.00 0.00 44.35 5.69
2702 3142 2.414994 AGTGCACATCATTCAGGGAG 57.585 50.000 21.04 0.00 0.00 4.30
2733 3173 3.429881 GGCATTTAACTGAACTTGCTTGC 59.570 43.478 0.00 0.00 30.48 4.01
2755 3195 2.500229 TGAAACTTAAGGAGCCGTTGG 58.500 47.619 7.53 0.00 0.00 3.77
2756 3196 3.058224 CCTTGAAACTTAAGGAGCCGTTG 60.058 47.826 7.53 0.00 46.08 4.10
2770 3210 4.498177 GCAAGACCTGAAAGTCCTTGAAAC 60.498 45.833 0.00 0.00 41.18 2.78
2772 3212 3.214328 GCAAGACCTGAAAGTCCTTGAA 58.786 45.455 0.00 0.00 41.18 2.69
2797 3237 3.183793 ACCGGAAAGTTCGTTACAGTT 57.816 42.857 9.46 0.00 0.00 3.16
2798 3238 2.896745 ACCGGAAAGTTCGTTACAGT 57.103 45.000 9.46 0.00 0.00 3.55
2850 3358 3.475774 CGTTCGGCACAGTACGGC 61.476 66.667 0.00 0.00 32.53 5.68
2909 3417 0.308993 GCAGCAAGATGATAACCGCC 59.691 55.000 0.00 0.00 0.00 6.13
2991 3500 2.764314 GCATGTAGCCACGCCCTTG 61.764 63.158 0.00 0.00 37.23 3.61
3053 3566 1.138047 GGTCGTCGATTTCGCATCGT 61.138 55.000 14.19 0.00 41.77 3.73
3066 3579 0.320508 AAGAAGAAAGCGGGGTCGTC 60.321 55.000 0.00 0.00 38.89 4.20
3070 3583 1.605753 GTCAAAGAAGAAAGCGGGGT 58.394 50.000 0.00 0.00 0.00 4.95
3079 3592 1.002087 GAAGCGGGAGGTCAAAGAAGA 59.998 52.381 0.00 0.00 41.46 2.87
3080 3593 1.443802 GAAGCGGGAGGTCAAAGAAG 58.556 55.000 0.00 0.00 41.46 2.85
3086 3599 1.229209 AGAAGGAAGCGGGAGGTCA 60.229 57.895 0.00 0.00 41.46 4.02
3087 3600 1.518302 GAGAAGGAAGCGGGAGGTC 59.482 63.158 0.00 0.00 41.46 3.85
3117 3630 4.966787 GGCAGCGGGGTGGTTCAA 62.967 66.667 0.00 0.00 0.00 2.69
3142 3655 2.345991 GGTGGTCGCAGGCAGTTA 59.654 61.111 0.00 0.00 0.00 2.24
3177 3691 4.767255 GGCGAGGCTGTGTGGGAG 62.767 72.222 0.00 0.00 0.00 4.30
3218 3732 3.047877 GCAAGACCGACGTTGGGG 61.048 66.667 25.74 12.78 0.00 4.96
3246 3760 3.253061 GGGGCTAGAGGGATGGCC 61.253 72.222 0.00 0.00 45.59 5.36
3266 3780 1.137404 CAGAAAATCTTGGCCGGCG 59.863 57.895 22.54 6.96 0.00 6.46
3271 3785 0.881118 TCGCCACAGAAAATCTTGGC 59.119 50.000 16.71 16.71 42.20 4.52
3273 3787 3.904136 ACTTCGCCACAGAAAATCTTG 57.096 42.857 0.00 0.00 0.00 3.02
3274 3788 3.550842 GCAACTTCGCCACAGAAAATCTT 60.551 43.478 0.00 0.00 0.00 2.40
3285 3799 2.904866 GGTGGTGCAACTTCGCCA 60.905 61.111 2.04 0.00 43.71 5.69
3327 3841 1.452108 GATGGGGGCAGAAGAACGG 60.452 63.158 0.00 0.00 0.00 4.44
3328 3842 1.452108 GGATGGGGGCAGAAGAACG 60.452 63.158 0.00 0.00 0.00 3.95
3329 3843 1.076705 GGGATGGGGGCAGAAGAAC 60.077 63.158 0.00 0.00 0.00 3.01
3334 3848 4.470581 ATGGGGGATGGGGGCAGA 62.471 66.667 0.00 0.00 0.00 4.26
3335 3849 3.907130 GATGGGGGATGGGGGCAG 61.907 72.222 0.00 0.00 0.00 4.85
3337 3851 3.829311 TAGGATGGGGGATGGGGGC 62.829 68.421 0.00 0.00 0.00 5.80
3338 3852 1.072222 TTAGGATGGGGGATGGGGG 60.072 63.158 0.00 0.00 0.00 5.40
3341 3855 4.080313 TCTATCTTAGGATGGGGGATGG 57.920 50.000 0.00 0.00 32.31 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.