Multiple sequence alignment - TraesCS4A01G074800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G074800 chr4A 100.000 3794 0 0 1 3794 74153908 74150115 0.000000e+00 7007.0
1 TraesCS4A01G074800 chr4A 93.269 312 20 1 431 741 613414209 613414520 3.450000e-125 459.0
2 TraesCS4A01G074800 chr4A 92.500 320 22 2 432 750 76168847 76168529 1.240000e-124 457.0
3 TraesCS4A01G074800 chr4A 92.500 320 22 2 432 750 123977864 123978182 1.240000e-124 457.0
4 TraesCS4A01G074800 chr4D 90.008 2442 95 48 752 3128 392728842 392726485 0.000000e+00 3020.0
5 TraesCS4A01G074800 chr4D 91.358 243 15 3 150 392 392729146 392728910 1.020000e-85 327.0
6 TraesCS4A01G074800 chr4D 81.967 244 21 11 3304 3544 392726389 392726166 6.470000e-43 185.0
7 TraesCS4A01G074800 chr4D 94.186 86 4 1 3174 3259 392726484 392726400 3.080000e-26 130.0
8 TraesCS4A01G074800 chr4D 90.000 80 4 1 33 112 392729221 392729146 2.410000e-17 100.0
9 TraesCS4A01G074800 chr4D 96.154 52 1 1 382 432 392728897 392728846 2.430000e-12 84.2
10 TraesCS4A01G074800 chr4B 90.274 1203 69 16 751 1917 482646938 482645748 0.000000e+00 1530.0
11 TraesCS4A01G074800 chr4B 89.858 1055 49 31 1922 2943 482645704 482644675 0.000000e+00 1303.0
12 TraesCS4A01G074800 chr4B 85.242 393 22 6 2 389 482647379 482647018 4.630000e-99 372.0
13 TraesCS4A01G074800 chr4B 90.574 244 16 4 3400 3643 482643886 482643650 2.200000e-82 316.0
14 TraesCS4A01G074800 chr4B 88.703 239 18 6 3062 3296 482644642 482644409 2.230000e-72 283.0
15 TraesCS4A01G074800 chr4B 92.982 57 3 1 3650 3705 482642256 482642200 8.730000e-12 82.4
16 TraesCS4A01G074800 chr4B 92.308 52 3 1 382 432 482646996 482646945 5.260000e-09 73.1
17 TraesCS4A01G074800 chr6A 93.671 316 18 2 432 746 519236189 519236503 4.440000e-129 472.0
18 TraesCS4A01G074800 chr6A 93.891 311 16 3 440 748 420569984 420569675 2.060000e-127 466.0
19 TraesCS4A01G074800 chr6A 92.500 320 21 3 432 750 86014696 86015013 4.470000e-124 455.0
20 TraesCS4A01G074800 chr2A 93.333 315 21 0 432 746 701663922 701664236 2.060000e-127 466.0
21 TraesCS4A01G074800 chr1A 93.016 315 20 2 431 744 396863689 396864002 3.450000e-125 459.0
22 TraesCS4A01G074800 chr1A 92.500 320 22 2 432 750 189532544 189532862 1.240000e-124 457.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G074800 chr4A 74150115 74153908 3793 True 7007.000000 7007 100.000000 1 3794 1 chr4A.!!$R1 3793
1 TraesCS4A01G074800 chr4D 392726166 392729221 3055 True 641.033333 3020 90.612167 33 3544 6 chr4D.!!$R1 3511
2 TraesCS4A01G074800 chr4B 482642200 482647379 5179 True 565.642857 1530 89.991571 2 3705 7 chr4B.!!$R1 3703

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
440 475 0.036294 GCGTCAGACTAGGCCCTTTT 60.036 55.0 0.00 0.0 0.00 2.27 F
513 548 0.175989 TTTTGCCAAACGGACCCAAC 59.824 50.0 0.00 0.0 0.00 3.77 F
516 551 0.183014 TGCCAAACGGACCCAACTTA 59.817 50.0 0.00 0.0 0.00 2.24 F
743 778 0.190815 ATTGGAACCAAACAGGCCCT 59.809 50.0 10.36 0.0 43.14 5.19 F
2284 2416 0.321671 CACCGTCAATCAGGTCACCT 59.678 55.0 0.00 0.0 39.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2232 2364 0.033991 CGAAGGAGAGGAGGGTCTCA 60.034 60.000 3.44 0.00 44.29 3.27 R
2378 2515 0.604578 CACCTCCACCTGCAAAATGG 59.395 55.000 4.50 4.50 34.58 3.16 R
2520 2657 3.453070 GATCTCCTGCAGGACGCCC 62.453 68.421 32.00 16.34 39.78 6.13 R
2673 2810 4.504916 CTGCGGTGCTCCTCCTCG 62.505 72.222 2.85 0.00 0.00 4.63 R
3763 5745 0.037232 GCGTTTCTAGGCAGTCACCT 60.037 55.000 0.00 0.00 44.31 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 1.202510 GCAAAACCATGGTCAAGCACA 60.203 47.619 20.07 0.00 0.00 4.57
71 73 9.753674 AGGTCCTCTTATTTATTTGTTCATTCA 57.246 29.630 0.00 0.00 0.00 2.57
117 119 7.791029 TGGTACAGATTACAGAAGCAATCATA 58.209 34.615 0.00 0.00 34.28 2.15
139 141 9.123902 TCATAATGTAGGAAATGTCAAATCTGG 57.876 33.333 0.00 0.00 0.00 3.86
140 142 6.780457 AATGTAGGAAATGTCAAATCTGGG 57.220 37.500 0.00 0.00 0.00 4.45
141 143 4.016444 TGTAGGAAATGTCAAATCTGGGC 58.984 43.478 0.00 0.00 0.00 5.36
142 144 3.463048 AGGAAATGTCAAATCTGGGCT 57.537 42.857 0.00 0.00 0.00 5.19
143 145 4.591321 AGGAAATGTCAAATCTGGGCTA 57.409 40.909 0.00 0.00 0.00 3.93
144 146 4.934356 AGGAAATGTCAAATCTGGGCTAA 58.066 39.130 0.00 0.00 0.00 3.09
145 147 5.332743 AGGAAATGTCAAATCTGGGCTAAA 58.667 37.500 0.00 0.00 0.00 1.85
146 148 5.960202 AGGAAATGTCAAATCTGGGCTAAAT 59.040 36.000 0.00 0.00 0.00 1.40
147 149 6.044682 GGAAATGTCAAATCTGGGCTAAATG 58.955 40.000 0.00 0.00 0.00 2.32
148 150 6.351286 GGAAATGTCAAATCTGGGCTAAATGT 60.351 38.462 0.00 0.00 0.00 2.71
149 151 7.147915 GGAAATGTCAAATCTGGGCTAAATGTA 60.148 37.037 0.00 0.00 0.00 2.29
150 152 6.699575 ATGTCAAATCTGGGCTAAATGTAC 57.300 37.500 0.00 0.00 0.00 2.90
151 153 5.565509 TGTCAAATCTGGGCTAAATGTACA 58.434 37.500 0.00 0.00 0.00 2.90
152 154 5.647658 TGTCAAATCTGGGCTAAATGTACAG 59.352 40.000 0.33 0.00 0.00 2.74
153 155 5.648092 GTCAAATCTGGGCTAAATGTACAGT 59.352 40.000 0.33 0.00 0.00 3.55
154 156 5.880332 TCAAATCTGGGCTAAATGTACAGTC 59.120 40.000 0.33 0.00 0.00 3.51
187 189 7.230309 AGAGAAAAAGGAAAACATGAAGGAGAG 59.770 37.037 0.00 0.00 0.00 3.20
197 199 8.729805 AAAACATGAAGGAGAGATCAATACTC 57.270 34.615 0.00 0.00 34.95 2.59
198 200 7.673641 AACATGAAGGAGAGATCAATACTCT 57.326 36.000 0.00 0.00 45.74 3.24
199 201 8.774546 AACATGAAGGAGAGATCAATACTCTA 57.225 34.615 0.00 0.00 43.55 2.43
228 230 2.386661 ACACTGGCGACATCTTTAGG 57.613 50.000 0.00 0.00 41.51 2.69
251 253 5.759763 GGAAAATGCCATGGAATTAATGGAC 59.240 40.000 18.91 12.53 46.44 4.02
345 347 2.711922 CCTCGTGCCGGTTCTAGCT 61.712 63.158 1.90 0.00 0.00 3.32
431 466 2.126463 GCACGCTGCGTCAGACTA 60.126 61.111 26.49 0.00 38.32 2.59
432 467 2.155194 GCACGCTGCGTCAGACTAG 61.155 63.158 26.49 13.27 38.32 2.57
433 468 1.515088 CACGCTGCGTCAGACTAGG 60.515 63.158 26.49 7.64 38.32 3.02
434 469 2.580867 CGCTGCGTCAGACTAGGC 60.581 66.667 14.93 0.00 32.44 3.93
435 470 2.202810 GCTGCGTCAGACTAGGCC 60.203 66.667 10.46 0.00 32.44 5.19
436 471 2.496817 CTGCGTCAGACTAGGCCC 59.503 66.667 0.00 0.00 32.44 5.80
437 472 2.037367 TGCGTCAGACTAGGCCCT 59.963 61.111 0.00 0.00 0.00 5.19
438 473 1.608717 CTGCGTCAGACTAGGCCCTT 61.609 60.000 0.00 0.00 32.44 3.95
439 474 1.192146 TGCGTCAGACTAGGCCCTTT 61.192 55.000 0.00 0.00 0.00 3.11
440 475 0.036294 GCGTCAGACTAGGCCCTTTT 60.036 55.000 0.00 0.00 0.00 2.27
441 476 1.610886 GCGTCAGACTAGGCCCTTTTT 60.611 52.381 0.00 0.00 0.00 1.94
442 477 2.076863 CGTCAGACTAGGCCCTTTTTG 58.923 52.381 0.00 0.00 0.00 2.44
443 478 2.437413 GTCAGACTAGGCCCTTTTTGG 58.563 52.381 0.00 0.00 0.00 3.28
444 479 2.062636 TCAGACTAGGCCCTTTTTGGT 58.937 47.619 0.00 0.00 0.00 3.67
445 480 2.445525 TCAGACTAGGCCCTTTTTGGTT 59.554 45.455 0.00 0.00 0.00 3.67
446 481 3.117284 TCAGACTAGGCCCTTTTTGGTTT 60.117 43.478 0.00 0.00 0.00 3.27
447 482 3.255888 CAGACTAGGCCCTTTTTGGTTTC 59.744 47.826 0.00 0.00 0.00 2.78
448 483 3.117284 AGACTAGGCCCTTTTTGGTTTCA 60.117 43.478 0.00 0.00 0.00 2.69
449 484 3.639561 GACTAGGCCCTTTTTGGTTTCAA 59.360 43.478 0.00 0.00 0.00 2.69
450 485 4.034410 ACTAGGCCCTTTTTGGTTTCAAA 58.966 39.130 0.00 0.00 40.71 2.69
451 486 4.658435 ACTAGGCCCTTTTTGGTTTCAAAT 59.342 37.500 0.00 0.00 41.84 2.32
452 487 5.841783 ACTAGGCCCTTTTTGGTTTCAAATA 59.158 36.000 0.00 0.00 41.84 1.40
453 488 5.638530 AGGCCCTTTTTGGTTTCAAATAA 57.361 34.783 0.00 0.00 41.84 1.40
454 489 5.620206 AGGCCCTTTTTGGTTTCAAATAAG 58.380 37.500 0.00 0.00 41.84 1.73
455 490 5.131977 AGGCCCTTTTTGGTTTCAAATAAGT 59.868 36.000 0.00 0.00 41.84 2.24
456 491 5.468746 GGCCCTTTTTGGTTTCAAATAAGTC 59.531 40.000 0.00 0.00 41.84 3.01
457 492 6.052360 GCCCTTTTTGGTTTCAAATAAGTCA 58.948 36.000 0.00 0.00 41.84 3.41
458 493 6.018262 GCCCTTTTTGGTTTCAAATAAGTCAC 60.018 38.462 0.00 0.00 41.84 3.67
459 494 6.481976 CCCTTTTTGGTTTCAAATAAGTCACC 59.518 38.462 0.00 0.00 41.84 4.02
460 495 7.044798 CCTTTTTGGTTTCAAATAAGTCACCA 58.955 34.615 0.00 0.00 41.84 4.17
461 496 7.550906 CCTTTTTGGTTTCAAATAAGTCACCAA 59.449 33.333 0.00 0.00 41.84 3.67
462 497 9.108284 CTTTTTGGTTTCAAATAAGTCACCAAT 57.892 29.630 2.54 0.00 42.44 3.16
463 498 9.454859 TTTTTGGTTTCAAATAAGTCACCAATT 57.545 25.926 2.54 0.00 42.44 2.32
464 499 9.454859 TTTTGGTTTCAAATAAGTCACCAATTT 57.545 25.926 2.54 0.00 42.44 1.82
478 513 8.617290 AGTCACCAATTTATAAGTCGAAAAGT 57.383 30.769 0.00 0.00 0.00 2.66
479 514 8.504005 AGTCACCAATTTATAAGTCGAAAAGTG 58.496 33.333 0.00 0.00 0.00 3.16
480 515 7.270579 GTCACCAATTTATAAGTCGAAAAGTGC 59.729 37.037 2.33 0.00 29.41 4.40
481 516 7.041030 TCACCAATTTATAAGTCGAAAAGTGCA 60.041 33.333 2.33 0.00 29.41 4.57
482 517 7.593273 CACCAATTTATAAGTCGAAAAGTGCAA 59.407 33.333 0.00 0.00 29.41 4.08
483 518 8.138712 ACCAATTTATAAGTCGAAAAGTGCAAA 58.861 29.630 0.00 0.00 29.41 3.68
484 519 8.973378 CCAATTTATAAGTCGAAAAGTGCAAAA 58.027 29.630 0.00 0.00 29.41 2.44
485 520 9.993881 CAATTTATAAGTCGAAAAGTGCAAAAG 57.006 29.630 0.00 0.00 0.00 2.27
486 521 8.742554 ATTTATAAGTCGAAAAGTGCAAAAGG 57.257 30.769 0.00 0.00 0.00 3.11
487 522 5.767816 ATAAGTCGAAAAGTGCAAAAGGT 57.232 34.783 0.00 0.00 0.00 3.50
488 523 3.420839 AGTCGAAAAGTGCAAAAGGTG 57.579 42.857 0.00 0.00 0.00 4.00
489 524 3.013921 AGTCGAAAAGTGCAAAAGGTGA 58.986 40.909 0.00 0.00 0.00 4.02
490 525 3.105937 GTCGAAAAGTGCAAAAGGTGAC 58.894 45.455 0.00 0.00 0.00 3.67
505 540 4.237349 AGGTGACTTATTTTGCCAAACG 57.763 40.909 0.00 0.00 37.44 3.60
506 541 3.005367 AGGTGACTTATTTTGCCAAACGG 59.995 43.478 0.00 0.00 37.44 4.44
507 542 3.004944 GGTGACTTATTTTGCCAAACGGA 59.995 43.478 0.00 0.00 0.00 4.69
508 543 3.978855 GTGACTTATTTTGCCAAACGGAC 59.021 43.478 0.00 0.00 0.00 4.79
509 544 3.004944 TGACTTATTTTGCCAAACGGACC 59.995 43.478 0.00 0.00 0.00 4.46
510 545 2.297880 ACTTATTTTGCCAAACGGACCC 59.702 45.455 0.00 0.00 0.00 4.46
511 546 1.996798 TATTTTGCCAAACGGACCCA 58.003 45.000 0.00 0.00 0.00 4.51
512 547 1.123928 ATTTTGCCAAACGGACCCAA 58.876 45.000 0.00 0.00 0.00 4.12
513 548 0.175989 TTTTGCCAAACGGACCCAAC 59.824 50.000 0.00 0.00 0.00 3.77
514 549 0.684805 TTTGCCAAACGGACCCAACT 60.685 50.000 0.00 0.00 0.00 3.16
515 550 0.684805 TTGCCAAACGGACCCAACTT 60.685 50.000 0.00 0.00 0.00 2.66
516 551 0.183014 TGCCAAACGGACCCAACTTA 59.817 50.000 0.00 0.00 0.00 2.24
517 552 1.202952 TGCCAAACGGACCCAACTTAT 60.203 47.619 0.00 0.00 0.00 1.73
518 553 2.040012 TGCCAAACGGACCCAACTTATA 59.960 45.455 0.00 0.00 0.00 0.98
519 554 3.083293 GCCAAACGGACCCAACTTATAA 58.917 45.455 0.00 0.00 0.00 0.98
520 555 3.128068 GCCAAACGGACCCAACTTATAAG 59.872 47.826 11.05 11.05 0.00 1.73
521 556 4.329392 CCAAACGGACCCAACTTATAAGT 58.671 43.478 12.50 12.50 42.04 2.24
522 557 4.393990 CCAAACGGACCCAACTTATAAGTC 59.606 45.833 18.28 5.98 38.57 3.01
523 558 4.895668 AACGGACCCAACTTATAAGTCA 57.104 40.909 18.28 0.00 38.57 3.41
524 559 5.431179 AACGGACCCAACTTATAAGTCAT 57.569 39.130 18.28 1.19 38.57 3.06
525 560 5.019785 ACGGACCCAACTTATAAGTCATC 57.980 43.478 18.28 12.52 38.57 2.92
526 561 4.141779 ACGGACCCAACTTATAAGTCATCC 60.142 45.833 18.28 18.48 38.57 3.51
527 562 4.715713 GGACCCAACTTATAAGTCATCCC 58.284 47.826 18.28 11.96 38.57 3.85
528 563 4.165372 GGACCCAACTTATAAGTCATCCCA 59.835 45.833 18.28 0.00 38.57 4.37
529 564 5.339695 GGACCCAACTTATAAGTCATCCCAA 60.340 44.000 18.28 0.00 38.57 4.12
530 565 5.506708 ACCCAACTTATAAGTCATCCCAAC 58.493 41.667 18.28 0.00 38.57 3.77
531 566 5.253096 ACCCAACTTATAAGTCATCCCAACT 59.747 40.000 18.28 0.00 38.57 3.16
532 567 6.187682 CCCAACTTATAAGTCATCCCAACTT 58.812 40.000 18.28 0.00 38.57 2.66
533 568 7.037153 ACCCAACTTATAAGTCATCCCAACTTA 60.037 37.037 18.28 0.00 41.91 2.24
534 569 7.998964 CCCAACTTATAAGTCATCCCAACTTAT 59.001 37.037 18.28 11.86 46.48 1.73
556 591 8.718102 TTATAAGTCATAAGTTGCTTCACTCC 57.282 34.615 0.00 0.00 0.00 3.85
557 592 4.623932 AGTCATAAGTTGCTTCACTCCA 57.376 40.909 0.00 0.00 0.00 3.86
558 593 4.973168 AGTCATAAGTTGCTTCACTCCAA 58.027 39.130 0.00 0.00 0.00 3.53
559 594 4.757149 AGTCATAAGTTGCTTCACTCCAAC 59.243 41.667 0.00 0.00 41.13 3.77
566 601 5.891451 AGTTGCTTCACTCCAACTTAAAAC 58.109 37.500 0.56 0.00 46.86 2.43
567 602 5.652452 AGTTGCTTCACTCCAACTTAAAACT 59.348 36.000 0.56 0.00 46.86 2.66
568 603 6.152831 AGTTGCTTCACTCCAACTTAAAACTT 59.847 34.615 0.56 0.00 46.86 2.66
569 604 7.338449 AGTTGCTTCACTCCAACTTAAAACTTA 59.662 33.333 0.56 0.00 46.86 2.24
570 605 7.817418 TGCTTCACTCCAACTTAAAACTTAT 57.183 32.000 0.00 0.00 0.00 1.73
571 606 8.911918 TGCTTCACTCCAACTTAAAACTTATA 57.088 30.769 0.00 0.00 0.00 0.98
572 607 9.344772 TGCTTCACTCCAACTTAAAACTTATAA 57.655 29.630 0.00 0.00 0.00 0.98
573 608 9.827411 GCTTCACTCCAACTTAAAACTTATAAG 57.173 33.333 11.05 11.05 36.62 1.73
589 624 7.404671 ACTTATAAGTTACCCCTTTTGCATG 57.595 36.000 12.50 0.00 35.21 4.06
590 625 6.379988 ACTTATAAGTTACCCCTTTTGCATGG 59.620 38.462 12.50 0.00 35.21 3.66
591 626 1.937191 AGTTACCCCTTTTGCATGGG 58.063 50.000 11.68 11.68 45.34 4.00
594 629 3.712287 CCCCTTTTGCATGGGTCC 58.288 61.111 15.82 0.00 41.82 4.46
595 630 1.989508 CCCCTTTTGCATGGGTCCC 60.990 63.158 15.82 0.00 41.82 4.46
596 631 1.229145 CCCTTTTGCATGGGTCCCA 60.229 57.895 14.64 14.64 38.65 4.37
597 632 0.618393 CCCTTTTGCATGGGTCCCAT 60.618 55.000 18.56 18.56 46.37 4.00
598 633 0.826062 CCTTTTGCATGGGTCCCATC 59.174 55.000 21.49 15.47 43.15 3.51
599 634 1.559368 CTTTTGCATGGGTCCCATCA 58.441 50.000 21.49 17.75 43.15 3.07
600 635 1.205417 CTTTTGCATGGGTCCCATCAC 59.795 52.381 21.49 16.04 43.15 3.06
601 636 0.614415 TTTGCATGGGTCCCATCACC 60.614 55.000 21.49 12.40 43.15 4.02
602 637 1.508667 TTGCATGGGTCCCATCACCT 61.509 55.000 21.49 0.00 43.15 4.00
603 638 1.307647 GCATGGGTCCCATCACCTT 59.692 57.895 21.49 0.00 43.15 3.50
604 639 0.324645 GCATGGGTCCCATCACCTTT 60.325 55.000 21.49 0.00 43.15 3.11
605 640 1.064017 GCATGGGTCCCATCACCTTTA 60.064 52.381 21.49 0.00 43.15 1.85
606 641 2.654863 CATGGGTCCCATCACCTTTAC 58.345 52.381 21.49 0.00 43.15 2.01
607 642 1.748732 TGGGTCCCATCACCTTTACA 58.251 50.000 6.47 0.00 36.57 2.41
608 643 2.283834 TGGGTCCCATCACCTTTACAT 58.716 47.619 6.47 0.00 36.57 2.29
609 644 3.465832 TGGGTCCCATCACCTTTACATA 58.534 45.455 6.47 0.00 36.57 2.29
610 645 3.853181 TGGGTCCCATCACCTTTACATAA 59.147 43.478 6.47 0.00 36.57 1.90
611 646 4.292571 TGGGTCCCATCACCTTTACATAAA 59.707 41.667 6.47 0.00 36.57 1.40
612 647 5.222358 TGGGTCCCATCACCTTTACATAAAA 60.222 40.000 6.47 0.00 36.57 1.52
613 648 5.717654 GGGTCCCATCACCTTTACATAAAAA 59.282 40.000 1.78 0.00 36.57 1.94
636 671 7.750229 AAAACAAGATAGAAAGATGTGCTCA 57.250 32.000 0.00 0.00 0.00 4.26
637 672 6.981762 AACAAGATAGAAAGATGTGCTCAG 57.018 37.500 0.00 0.00 0.00 3.35
638 673 6.291648 ACAAGATAGAAAGATGTGCTCAGA 57.708 37.500 0.00 0.00 0.00 3.27
639 674 6.887013 ACAAGATAGAAAGATGTGCTCAGAT 58.113 36.000 0.00 0.00 0.00 2.90
640 675 6.762187 ACAAGATAGAAAGATGTGCTCAGATG 59.238 38.462 0.00 0.00 0.00 2.90
641 676 6.728089 AGATAGAAAGATGTGCTCAGATGA 57.272 37.500 0.00 0.00 0.00 2.92
642 677 6.514947 AGATAGAAAGATGTGCTCAGATGAC 58.485 40.000 0.00 0.00 0.00 3.06
643 678 4.822685 AGAAAGATGTGCTCAGATGACT 57.177 40.909 0.00 0.00 0.00 3.41
644 679 5.163281 AGAAAGATGTGCTCAGATGACTT 57.837 39.130 0.00 0.00 0.00 3.01
645 680 6.291648 AGAAAGATGTGCTCAGATGACTTA 57.708 37.500 0.00 0.00 0.00 2.24
646 681 6.887013 AGAAAGATGTGCTCAGATGACTTAT 58.113 36.000 0.00 0.00 0.00 1.73
647 682 8.016301 AGAAAGATGTGCTCAGATGACTTATA 57.984 34.615 0.00 0.00 0.00 0.98
648 683 8.481314 AGAAAGATGTGCTCAGATGACTTATAA 58.519 33.333 0.00 0.00 0.00 0.98
649 684 8.659925 AAAGATGTGCTCAGATGACTTATAAG 57.340 34.615 11.05 11.05 0.00 1.73
650 685 7.358770 AGATGTGCTCAGATGACTTATAAGT 57.641 36.000 18.05 18.05 43.16 2.24
670 705 4.900635 GTCAGATGACAACCAAACAAGT 57.099 40.909 8.09 0.00 44.18 3.16
671 706 4.601019 GTCAGATGACAACCAAACAAGTG 58.399 43.478 8.09 0.00 44.18 3.16
672 707 4.096382 GTCAGATGACAACCAAACAAGTGT 59.904 41.667 8.09 0.00 44.18 3.55
673 708 4.096231 TCAGATGACAACCAAACAAGTGTG 59.904 41.667 0.00 0.00 0.00 3.82
674 709 4.096231 CAGATGACAACCAAACAAGTGTGA 59.904 41.667 0.00 0.00 0.00 3.58
675 710 3.840890 TGACAACCAAACAAGTGTGAC 57.159 42.857 0.00 0.00 0.00 3.67
676 711 3.417101 TGACAACCAAACAAGTGTGACT 58.583 40.909 0.00 0.00 0.00 3.41
677 712 3.823873 TGACAACCAAACAAGTGTGACTT 59.176 39.130 0.00 0.00 39.39 3.01
678 713 5.004448 TGACAACCAAACAAGTGTGACTTA 58.996 37.500 0.00 0.00 36.03 2.24
679 714 5.650266 TGACAACCAAACAAGTGTGACTTAT 59.350 36.000 0.00 0.00 36.03 1.73
680 715 6.824196 TGACAACCAAACAAGTGTGACTTATA 59.176 34.615 0.00 0.00 36.03 0.98
681 716 7.337184 TGACAACCAAACAAGTGTGACTTATAA 59.663 33.333 0.00 0.00 36.03 0.98
682 717 7.703328 ACAACCAAACAAGTGTGACTTATAAG 58.297 34.615 11.05 11.05 36.03 1.73
683 718 7.338449 ACAACCAAACAAGTGTGACTTATAAGT 59.662 33.333 18.05 18.05 43.16 2.24
703 738 6.867662 AAGTCACTGATTTTAAGTCACCTG 57.132 37.500 0.00 0.00 0.00 4.00
704 739 6.174720 AGTCACTGATTTTAAGTCACCTGA 57.825 37.500 0.00 0.00 0.00 3.86
705 740 5.992217 AGTCACTGATTTTAAGTCACCTGAC 59.008 40.000 12.02 12.02 45.08 3.51
734 769 9.762381 ATAAGTTAGGTGAATTATTGGAACCAA 57.238 29.630 8.75 8.75 40.47 3.67
735 770 8.485578 AAGTTAGGTGAATTATTGGAACCAAA 57.514 30.769 10.36 0.00 39.55 3.28
736 771 7.892609 AGTTAGGTGAATTATTGGAACCAAAC 58.107 34.615 10.36 3.26 39.55 2.93
737 772 7.507616 AGTTAGGTGAATTATTGGAACCAAACA 59.492 33.333 10.36 0.94 39.55 2.83
738 773 6.345096 AGGTGAATTATTGGAACCAAACAG 57.655 37.500 10.36 0.00 39.55 3.16
739 774 5.245977 AGGTGAATTATTGGAACCAAACAGG 59.754 40.000 10.36 0.00 45.67 4.00
740 775 4.929211 GTGAATTATTGGAACCAAACAGGC 59.071 41.667 10.36 2.16 43.14 4.85
741 776 4.020662 TGAATTATTGGAACCAAACAGGCC 60.021 41.667 10.36 0.00 43.14 5.19
742 777 1.931635 TATTGGAACCAAACAGGCCC 58.068 50.000 10.36 0.00 43.14 5.80
743 778 0.190815 ATTGGAACCAAACAGGCCCT 59.809 50.000 10.36 0.00 43.14 5.19
746 781 1.254026 GGAACCAAACAGGCCCTAAC 58.746 55.000 0.00 0.00 43.14 2.34
749 784 0.850784 ACCAAACAGGCCCTAACACT 59.149 50.000 0.00 0.00 43.14 3.55
845 882 3.973267 GAGCCGAGGCACGTCTCAC 62.973 68.421 17.18 0.00 44.76 3.51
1313 1368 4.603946 GTACGGCGCCCATCTCCC 62.604 72.222 23.46 0.00 0.00 4.30
1350 1411 6.549912 TTTCGCTTGGATCTCATGATAATG 57.450 37.500 0.00 0.00 32.19 1.90
1373 1436 2.904131 GCCTGTGCTCTAGGGTCC 59.096 66.667 0.00 0.00 35.80 4.46
1397 1460 3.560481 TCGTGTAGCACTGAGATAGTAGC 59.440 47.826 0.00 0.00 37.60 3.58
1438 1501 8.998377 GTTTGTGATTAATTGTGGCCTAAAAAT 58.002 29.630 3.32 4.39 0.00 1.82
1458 1521 7.910441 AAAATCATGGAACCAATTGTCAATC 57.090 32.000 4.43 0.00 0.00 2.67
1467 1530 6.587608 GGAACCAATTGTCAATCTGAACAATC 59.412 38.462 4.43 0.00 31.69 2.67
1487 1550 0.811281 GCCGCTGAAGCAAAACCTAT 59.189 50.000 2.79 0.00 42.21 2.57
1559 1628 9.436957 AATACTACATGGTACTAATTGCATAGC 57.563 33.333 0.00 0.00 0.00 2.97
1560 1629 5.926542 ACTACATGGTACTAATTGCATAGCG 59.073 40.000 0.00 0.00 0.00 4.26
1561 1630 4.703897 ACATGGTACTAATTGCATAGCGT 58.296 39.130 0.00 0.00 0.00 5.07
1562 1631 5.849510 ACATGGTACTAATTGCATAGCGTA 58.150 37.500 0.00 0.00 0.00 4.42
1579 1648 1.808945 CGTAGTACTCCAACTGACCGT 59.191 52.381 0.00 0.00 0.00 4.83
1601 1674 6.395629 CGTTGAAAATCACTAGGAAGGAGTA 58.604 40.000 0.00 0.00 0.00 2.59
1609 1682 4.080526 TCACTAGGAAGGAGTAAAATGGGC 60.081 45.833 0.00 0.00 0.00 5.36
1631 1704 2.272146 CAGGCATGCCGGGTACTT 59.728 61.111 30.50 8.98 41.95 2.24
1641 1730 1.033746 CCGGGTACTTCGCTGGTCTA 61.034 60.000 0.00 0.00 0.00 2.59
1743 1832 2.925724 AGTTCCAACAAACGTGGATCA 58.074 42.857 0.00 0.00 44.62 2.92
1757 1846 3.005554 GTGGATCATTCTCACACACCAG 58.994 50.000 0.00 0.00 32.58 4.00
1810 1899 3.262420 CCCAGTAGAAATTCACTGTCGG 58.738 50.000 17.61 12.00 40.47 4.79
1841 1933 2.489329 ACATTGCAATTCCCAGAAGACG 59.511 45.455 9.83 0.00 0.00 4.18
1910 2002 3.056179 TCAAATCAGTCCTGTCGTGCATA 60.056 43.478 0.00 0.00 0.00 3.14
2067 2199 1.742268 GAGTACGTGGACCTGTACCTC 59.258 57.143 18.33 13.29 41.42 3.85
2232 2364 3.257624 CCAATTTCTCCTGCAAGAAGCTT 59.742 43.478 0.00 0.00 45.94 3.74
2284 2416 0.321671 CACCGTCAATCAGGTCACCT 59.678 55.000 0.00 0.00 39.00 4.00
2287 2419 2.635915 ACCGTCAATCAGGTCACCTTAA 59.364 45.455 0.00 0.00 35.50 1.85
2288 2420 3.000727 CCGTCAATCAGGTCACCTTAAC 58.999 50.000 0.00 0.00 0.00 2.01
2292 2424 4.020128 GTCAATCAGGTCACCTTAACTCCT 60.020 45.833 0.00 0.00 0.00 3.69
2303 2440 6.985059 GTCACCTTAACTCCTTACATACATCC 59.015 42.308 0.00 0.00 0.00 3.51
2306 2443 7.280205 CACCTTAACTCCTTACATACATCCAAC 59.720 40.741 0.00 0.00 0.00 3.77
2308 2445 8.701895 CCTTAACTCCTTACATACATCCAACTA 58.298 37.037 0.00 0.00 0.00 2.24
2311 2448 8.964476 AACTCCTTACATACATCCAACTAATG 57.036 34.615 0.00 0.00 0.00 1.90
2343 2480 6.872628 AAACAATGCAGATCGATCATACAT 57.127 33.333 26.47 21.17 0.00 2.29
2349 2486 6.196079 TGCAGATCGATCATACATACTACC 57.804 41.667 26.47 0.00 0.00 3.18
2351 2488 6.030849 GCAGATCGATCATACATACTACCAC 58.969 44.000 26.47 0.00 0.00 4.16
2353 2490 6.092259 CAGATCGATCATACATACTACCACGA 59.908 42.308 26.47 0.00 0.00 4.35
2354 2491 6.653740 AGATCGATCATACATACTACCACGAA 59.346 38.462 26.47 0.00 0.00 3.85
2355 2492 6.237313 TCGATCATACATACTACCACGAAG 57.763 41.667 0.00 0.00 0.00 3.79
2371 2508 2.427453 ACGAAGTGACAAGTGAGTGACT 59.573 45.455 0.00 0.00 42.51 3.41
2378 2515 2.478134 GACAAGTGAGTGACTGATGTGC 59.522 50.000 0.00 0.00 34.02 4.57
2559 2696 4.021925 GCGTCCAGGGGCAAGAGT 62.022 66.667 0.00 0.00 0.00 3.24
2673 2810 4.459089 GACGGCTGGGAGCTCACC 62.459 72.222 14.84 13.64 41.99 4.02
2784 2921 2.363147 GAGGAGCTCTGGGACGGT 60.363 66.667 14.64 0.00 35.30 4.83
2796 2933 2.031870 TGGGACGGTGAGATATGAGTG 58.968 52.381 0.00 0.00 0.00 3.51
2797 2934 2.307768 GGGACGGTGAGATATGAGTGA 58.692 52.381 0.00 0.00 0.00 3.41
2798 2935 2.894126 GGGACGGTGAGATATGAGTGAT 59.106 50.000 0.00 0.00 0.00 3.06
2801 2938 4.541779 GACGGTGAGATATGAGTGATCAC 58.458 47.826 18.47 18.47 39.59 3.06
2811 2948 1.272928 TGAGTGATCACTGGAGAGGCT 60.273 52.381 32.50 5.57 42.66 4.58
2813 2950 0.177604 GTGATCACTGGAGAGGCTGG 59.822 60.000 18.83 0.00 0.00 4.85
2837 2974 2.280592 GGTGCGACGGGTTCTGTT 60.281 61.111 0.00 0.00 0.00 3.16
2840 2977 3.047877 GCGACGGGTTCTGTTGGG 61.048 66.667 0.00 0.00 0.00 4.12
2841 2978 2.424302 CGACGGGTTCTGTTGGGT 59.576 61.111 0.00 0.00 0.00 4.51
2933 3096 6.645827 TGCATTGTGTTTCAGTGAATAAATGG 59.354 34.615 20.39 7.79 36.12 3.16
2949 3112 7.713507 TGAATAAATGGAGATGTTTACTACCGG 59.286 37.037 0.00 0.00 0.00 5.28
2965 3128 6.462552 ACTACCGGATTTAAGGAGAGTTAC 57.537 41.667 9.46 0.00 0.00 2.50
3027 3190 5.830991 ACTTTCCTGGCAATGTAAGTTGTTA 59.169 36.000 3.78 0.00 0.00 2.41
3041 3204 5.590530 AAGTTGTTACAATGGCAGAACAA 57.409 34.783 0.00 12.81 38.97 2.83
3044 3207 6.402222 AGTTGTTACAATGGCAGAACAAAAA 58.598 32.000 16.44 0.00 41.89 1.94
3045 3208 6.534793 AGTTGTTACAATGGCAGAACAAAAAG 59.465 34.615 16.44 0.00 41.89 2.27
3048 3211 6.756074 TGTTACAATGGCAGAACAAAAAGAAG 59.244 34.615 0.00 0.00 0.00 2.85
3049 3212 4.696455 ACAATGGCAGAACAAAAAGAAGG 58.304 39.130 0.00 0.00 0.00 3.46
3050 3213 4.162131 ACAATGGCAGAACAAAAAGAAGGT 59.838 37.500 0.00 0.00 0.00 3.50
3051 3214 3.799281 TGGCAGAACAAAAAGAAGGTG 57.201 42.857 0.00 0.00 0.00 4.00
3052 3215 3.096092 TGGCAGAACAAAAAGAAGGTGT 58.904 40.909 0.00 0.00 0.00 4.16
3053 3216 4.274147 TGGCAGAACAAAAAGAAGGTGTA 58.726 39.130 0.00 0.00 0.00 2.90
3148 3323 0.883833 GGACATGACCAAGCAACTGG 59.116 55.000 9.48 0.00 42.68 4.00
3165 3340 3.741476 GACCGCTTGCCAGGCTTG 61.741 66.667 14.15 6.44 0.00 4.01
3168 3343 4.093952 CGCTTGCCAGGCTTGTCG 62.094 66.667 14.15 7.25 0.00 4.35
3171 3346 1.026718 GCTTGCCAGGCTTGTCGTAT 61.027 55.000 14.15 0.00 0.00 3.06
3172 3347 0.729116 CTTGCCAGGCTTGTCGTATG 59.271 55.000 14.15 0.00 0.00 2.39
3173 3348 0.323302 TTGCCAGGCTTGTCGTATGA 59.677 50.000 14.15 0.00 0.00 2.15
3286 3461 1.134250 AGCCCTTTAGCTAGCTCTTGC 60.134 52.381 23.26 17.17 42.70 4.01
3301 3476 5.323371 GCTCTTGCTTCTCTCTCTCTAAA 57.677 43.478 0.00 0.00 36.03 1.85
3302 3477 5.719173 GCTCTTGCTTCTCTCTCTCTAAAA 58.281 41.667 0.00 0.00 36.03 1.52
3327 3502 1.734137 GGTAGCTCTTGATCGGCGA 59.266 57.895 13.87 13.87 0.00 5.54
3328 3503 0.102481 GGTAGCTCTTGATCGGCGAA 59.898 55.000 15.93 0.00 0.00 4.70
3455 4049 8.316214 ACGAATCCCAAAAATTCAGTACTACTA 58.684 33.333 0.00 0.00 33.60 1.82
3504 4098 1.138266 GGCACCTGAAATACTCCGCTA 59.862 52.381 0.00 0.00 0.00 4.26
3534 4128 5.177696 GTCCATGTCTGTTAGTTCTGAACAC 59.822 44.000 21.50 12.61 33.35 3.32
3550 4144 3.493129 TGAACACTCCGAGAATTCAAACG 59.507 43.478 8.44 10.01 0.00 3.60
3566 4160 3.886505 TCAAACGAAAAAGGGCATACACT 59.113 39.130 0.00 0.00 0.00 3.55
3575 4169 7.475137 AAAAAGGGCATACACTAAGCATAAA 57.525 32.000 0.00 0.00 0.00 1.40
3591 4185 6.442513 AGCATAAATCTTTGCTAGTTCCAC 57.557 37.500 0.00 0.00 46.92 4.02
3602 4196 2.554032 GCTAGTTCCACTGCACATTTGT 59.446 45.455 0.00 0.00 0.00 2.83
3639 4233 1.153469 CCTCAAGAGGCCGAGAAGC 60.153 63.158 2.68 0.00 42.44 3.86
3648 4242 2.457080 GCCGAGAAGCCAGTGTAAC 58.543 57.895 0.00 0.00 0.00 2.50
3681 5662 2.638363 ACTCCAAGGTCCAAACTAGGTC 59.362 50.000 0.00 0.00 0.00 3.85
3705 5687 3.453353 CCCCTTAATCGTCTGGGACTTAA 59.547 47.826 0.00 0.00 42.11 1.85
3706 5688 4.102681 CCCCTTAATCGTCTGGGACTTAAT 59.897 45.833 0.00 0.00 42.11 1.40
3707 5689 5.397559 CCCCTTAATCGTCTGGGACTTAATT 60.398 44.000 0.00 0.00 42.11 1.40
3708 5690 6.183361 CCCCTTAATCGTCTGGGACTTAATTA 60.183 42.308 0.00 0.00 42.11 1.40
3709 5691 6.704937 CCCTTAATCGTCTGGGACTTAATTAC 59.295 42.308 0.00 0.00 42.11 1.89
3710 5692 7.418712 CCCTTAATCGTCTGGGACTTAATTACT 60.419 40.741 0.00 0.00 42.11 2.24
3711 5693 7.652507 CCTTAATCGTCTGGGACTTAATTACTC 59.347 40.741 0.00 0.00 0.00 2.59
3712 5694 6.540438 AATCGTCTGGGACTTAATTACTCA 57.460 37.500 0.00 0.00 0.00 3.41
3713 5695 5.988310 TCGTCTGGGACTTAATTACTCAA 57.012 39.130 0.00 0.00 0.00 3.02
3714 5696 5.962433 TCGTCTGGGACTTAATTACTCAAG 58.038 41.667 0.00 0.00 0.00 3.02
3715 5697 5.479375 TCGTCTGGGACTTAATTACTCAAGT 59.521 40.000 0.00 0.00 37.69 3.16
3716 5698 6.014840 TCGTCTGGGACTTAATTACTCAAGTT 60.015 38.462 0.00 0.00 35.17 2.66
3717 5699 7.177216 TCGTCTGGGACTTAATTACTCAAGTTA 59.823 37.037 0.00 0.00 35.17 2.24
3718 5700 7.275123 CGTCTGGGACTTAATTACTCAAGTTAC 59.725 40.741 0.00 0.00 35.17 2.50
3719 5701 8.312564 GTCTGGGACTTAATTACTCAAGTTACT 58.687 37.037 0.00 0.00 35.17 2.24
3720 5702 8.311836 TCTGGGACTTAATTACTCAAGTTACTG 58.688 37.037 0.00 0.00 35.17 2.74
3721 5703 8.197592 TGGGACTTAATTACTCAAGTTACTGA 57.802 34.615 0.00 0.00 35.17 3.41
3722 5704 8.653191 TGGGACTTAATTACTCAAGTTACTGAA 58.347 33.333 0.00 0.00 35.17 3.02
3723 5705 9.668497 GGGACTTAATTACTCAAGTTACTGAAT 57.332 33.333 0.00 0.00 35.17 2.57
3743 5725 9.630098 ACTGAATACATTCAAAAGTAAGCATTG 57.370 29.630 6.15 0.00 45.26 2.82
3744 5726 8.984891 TGAATACATTCAAAAGTAAGCATTGG 57.015 30.769 2.15 0.00 43.26 3.16
3745 5727 8.034215 TGAATACATTCAAAAGTAAGCATTGGG 58.966 33.333 2.15 0.00 43.26 4.12
3746 5728 5.806654 ACATTCAAAAGTAAGCATTGGGT 57.193 34.783 0.00 0.00 0.00 4.51
3747 5729 6.173427 ACATTCAAAAGTAAGCATTGGGTT 57.827 33.333 0.00 0.00 38.49 4.11
3748 5730 5.990996 ACATTCAAAAGTAAGCATTGGGTTG 59.009 36.000 0.00 0.00 35.99 3.77
3749 5731 3.988819 TCAAAAGTAAGCATTGGGTTGC 58.011 40.909 0.00 0.00 43.09 4.17
3757 5739 2.531522 GCATTGGGTTGCTTCAGTTT 57.468 45.000 0.00 0.00 39.57 2.66
3758 5740 2.137523 GCATTGGGTTGCTTCAGTTTG 58.862 47.619 0.00 0.00 39.57 2.93
3759 5741 2.758009 CATTGGGTTGCTTCAGTTTGG 58.242 47.619 0.00 0.00 0.00 3.28
3760 5742 1.118838 TTGGGTTGCTTCAGTTTGGG 58.881 50.000 0.00 0.00 0.00 4.12
3761 5743 0.758685 TGGGTTGCTTCAGTTTGGGG 60.759 55.000 0.00 0.00 0.00 4.96
3762 5744 0.469144 GGGTTGCTTCAGTTTGGGGA 60.469 55.000 0.00 0.00 0.00 4.81
3763 5745 1.408969 GGTTGCTTCAGTTTGGGGAA 58.591 50.000 0.00 0.00 0.00 3.97
3764 5746 1.341209 GGTTGCTTCAGTTTGGGGAAG 59.659 52.381 0.00 0.00 42.62 3.46
3765 5747 1.341209 GTTGCTTCAGTTTGGGGAAGG 59.659 52.381 0.00 0.00 40.61 3.46
3766 5748 0.555769 TGCTTCAGTTTGGGGAAGGT 59.444 50.000 0.00 0.00 40.61 3.50
3767 5749 0.961753 GCTTCAGTTTGGGGAAGGTG 59.038 55.000 0.00 0.00 40.61 4.00
3768 5750 1.478654 GCTTCAGTTTGGGGAAGGTGA 60.479 52.381 0.00 0.00 40.61 4.02
3769 5751 2.230660 CTTCAGTTTGGGGAAGGTGAC 58.769 52.381 0.00 0.00 37.46 3.67
3771 5753 1.142870 TCAGTTTGGGGAAGGTGACTG 59.857 52.381 0.00 0.00 42.68 3.51
3772 5754 0.178990 AGTTTGGGGAAGGTGACTGC 60.179 55.000 0.00 0.00 42.68 4.40
3781 5763 2.338500 GAAGGTGACTGCCTAGAAACG 58.662 52.381 0.00 0.00 42.68 3.60
3782 5764 0.037232 AGGTGACTGCCTAGAAACGC 60.037 55.000 0.00 0.00 41.13 4.84
3783 5765 1.019805 GGTGACTGCCTAGAAACGCC 61.020 60.000 0.00 0.00 0.00 5.68
3784 5766 0.320421 GTGACTGCCTAGAAACGCCA 60.320 55.000 0.00 0.00 0.00 5.69
3785 5767 0.394938 TGACTGCCTAGAAACGCCAA 59.605 50.000 0.00 0.00 0.00 4.52
3786 5768 1.079503 GACTGCCTAGAAACGCCAAG 58.920 55.000 0.00 0.00 0.00 3.61
3787 5769 0.955919 ACTGCCTAGAAACGCCAAGC 60.956 55.000 0.00 0.00 0.00 4.01
3788 5770 0.674895 CTGCCTAGAAACGCCAAGCT 60.675 55.000 0.00 0.00 0.00 3.74
3789 5771 0.673644 TGCCTAGAAACGCCAAGCTC 60.674 55.000 0.00 0.00 0.00 4.09
3790 5772 0.391793 GCCTAGAAACGCCAAGCTCT 60.392 55.000 0.00 0.00 0.00 4.09
3791 5773 1.946283 GCCTAGAAACGCCAAGCTCTT 60.946 52.381 0.00 0.00 0.00 2.85
3792 5774 2.427506 CCTAGAAACGCCAAGCTCTTT 58.572 47.619 0.00 0.00 0.00 2.52
3793 5775 2.814336 CCTAGAAACGCCAAGCTCTTTT 59.186 45.455 0.00 0.00 0.00 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.068333 GCAAACCAGCGATGACAACAT 60.068 47.619 0.06 0.00 39.67 2.71
1 2 0.310543 GCAAACCAGCGATGACAACA 59.689 50.000 0.06 0.00 0.00 3.33
2 3 0.310543 TGCAAACCAGCGATGACAAC 59.689 50.000 0.06 0.00 37.31 3.32
4 5 1.028130 TTTGCAAACCAGCGATGACA 58.972 45.000 8.05 0.00 37.31 3.58
5 6 1.786579 GTTTTGCAAACCAGCGATGAC 59.213 47.619 12.39 0.00 37.31 3.06
6 7 1.269517 GGTTTTGCAAACCAGCGATGA 60.270 47.619 12.39 0.00 40.03 2.92
7 8 1.139163 GGTTTTGCAAACCAGCGATG 58.861 50.000 12.39 0.00 40.03 3.84
8 9 0.749649 TGGTTTTGCAAACCAGCGAT 59.250 45.000 21.93 0.00 44.74 4.58
9 10 2.193532 TGGTTTTGCAAACCAGCGA 58.806 47.368 21.93 2.69 44.74 4.93
10 11 4.823276 TGGTTTTGCAAACCAGCG 57.177 50.000 21.93 0.00 44.74 5.18
29 30 2.079925 GACCTTCAGATGTGCTTGACC 58.920 52.381 0.00 0.00 0.00 4.02
31 32 1.980765 AGGACCTTCAGATGTGCTTGA 59.019 47.619 0.00 0.00 27.70 3.02
39 40 9.981460 AACAAATAAATAAGAGGACCTTCAGAT 57.019 29.630 0.00 0.00 36.34 2.90
88 90 9.109393 GATTGCTTCTGTAATCTGTACCAATTA 57.891 33.333 0.00 0.00 40.55 1.40
89 91 7.611467 TGATTGCTTCTGTAATCTGTACCAATT 59.389 33.333 7.97 0.00 42.95 2.32
92 94 6.048732 TGATTGCTTCTGTAATCTGTACCA 57.951 37.500 7.97 0.00 42.95 3.25
117 119 5.127682 GCCCAGATTTGACATTTCCTACATT 59.872 40.000 0.00 0.00 0.00 2.71
138 140 8.179509 TCTCTAATAGACTGTACATTTAGCCC 57.820 38.462 0.00 0.00 0.00 5.19
139 141 9.069082 TCTCTCTAATAGACTGTACATTTAGCC 57.931 37.037 0.00 0.00 0.00 3.93
146 148 9.529823 TCCTTTTTCTCTCTAATAGACTGTACA 57.470 33.333 0.00 0.00 0.00 2.90
179 181 7.001674 TGGAGTAGAGTATTGATCTCTCCTTC 58.998 42.308 15.82 3.91 41.66 3.46
187 189 8.634444 AGTGTAACATGGAGTAGAGTATTGATC 58.366 37.037 0.00 0.00 41.43 2.92
197 199 2.165641 TCGCCAGTGTAACATGGAGTAG 59.834 50.000 0.00 0.00 41.43 2.57
198 200 2.094390 GTCGCCAGTGTAACATGGAGTA 60.094 50.000 0.00 0.00 41.43 2.59
199 201 0.973632 TCGCCAGTGTAACATGGAGT 59.026 50.000 0.00 0.00 41.43 3.85
201 203 0.682292 TGTCGCCAGTGTAACATGGA 59.318 50.000 0.00 0.00 41.43 3.41
202 204 1.665679 GATGTCGCCAGTGTAACATGG 59.334 52.381 0.00 0.00 41.43 3.66
203 205 2.621338 AGATGTCGCCAGTGTAACATG 58.379 47.619 6.92 0.00 41.43 3.21
204 206 3.334583 AAGATGTCGCCAGTGTAACAT 57.665 42.857 2.86 2.86 41.43 2.71
228 230 6.585416 AGTCCATTAATTCCATGGCATTTTC 58.415 36.000 15.03 1.12 41.10 2.29
251 253 4.612259 GCAGCAGTTGAAATGTCACACTAG 60.612 45.833 0.00 0.00 31.90 2.57
345 347 1.895231 GCGCTGATCATGCCATCCA 60.895 57.895 0.00 0.00 0.00 3.41
426 461 3.117284 TGAAACCAAAAAGGGCCTAGTCT 60.117 43.478 6.41 0.00 43.89 3.24
427 462 3.227614 TGAAACCAAAAAGGGCCTAGTC 58.772 45.455 6.41 0.00 43.89 2.59
428 463 3.322191 TGAAACCAAAAAGGGCCTAGT 57.678 42.857 6.41 0.00 43.89 2.57
429 464 4.681074 TTTGAAACCAAAAAGGGCCTAG 57.319 40.909 6.41 0.00 43.89 3.02
430 465 6.327887 ACTTATTTGAAACCAAAAAGGGCCTA 59.672 34.615 6.41 0.00 43.89 3.93
431 466 5.131977 ACTTATTTGAAACCAAAAAGGGCCT 59.868 36.000 0.00 0.00 43.89 5.19
432 467 5.373222 ACTTATTTGAAACCAAAAAGGGCC 58.627 37.500 0.00 0.00 43.89 5.80
433 468 6.018262 GTGACTTATTTGAAACCAAAAAGGGC 60.018 38.462 0.00 0.00 43.89 5.19
434 469 6.481976 GGTGACTTATTTGAAACCAAAAAGGG 59.518 38.462 0.00 0.00 43.89 3.95
435 470 7.044798 TGGTGACTTATTTGAAACCAAAAAGG 58.955 34.615 0.00 0.00 45.67 3.11
436 471 8.485976 TTGGTGACTTATTTGAAACCAAAAAG 57.514 30.769 2.71 0.00 42.94 2.27
452 487 9.063615 ACTTTTCGACTTATAAATTGGTGACTT 57.936 29.630 0.00 0.00 0.00 3.01
453 488 8.504005 CACTTTTCGACTTATAAATTGGTGACT 58.496 33.333 0.00 0.00 0.00 3.41
454 489 7.270579 GCACTTTTCGACTTATAAATTGGTGAC 59.729 37.037 0.00 0.00 0.00 3.67
455 490 7.041030 TGCACTTTTCGACTTATAAATTGGTGA 60.041 33.333 0.00 0.00 0.00 4.02
456 491 7.081349 TGCACTTTTCGACTTATAAATTGGTG 58.919 34.615 0.00 0.00 0.00 4.17
457 492 7.209471 TGCACTTTTCGACTTATAAATTGGT 57.791 32.000 0.00 0.00 0.00 3.67
458 493 8.514136 TTTGCACTTTTCGACTTATAAATTGG 57.486 30.769 0.00 0.00 0.00 3.16
459 494 9.993881 CTTTTGCACTTTTCGACTTATAAATTG 57.006 29.630 0.00 0.00 0.00 2.32
460 495 9.191995 CCTTTTGCACTTTTCGACTTATAAATT 57.808 29.630 0.00 0.00 0.00 1.82
461 496 8.357402 ACCTTTTGCACTTTTCGACTTATAAAT 58.643 29.630 0.00 0.00 0.00 1.40
462 497 7.646130 CACCTTTTGCACTTTTCGACTTATAAA 59.354 33.333 0.00 0.00 0.00 1.40
463 498 7.012515 TCACCTTTTGCACTTTTCGACTTATAA 59.987 33.333 0.00 0.00 0.00 0.98
464 499 6.483974 TCACCTTTTGCACTTTTCGACTTATA 59.516 34.615 0.00 0.00 0.00 0.98
465 500 5.298276 TCACCTTTTGCACTTTTCGACTTAT 59.702 36.000 0.00 0.00 0.00 1.73
466 501 4.636648 TCACCTTTTGCACTTTTCGACTTA 59.363 37.500 0.00 0.00 0.00 2.24
467 502 3.442273 TCACCTTTTGCACTTTTCGACTT 59.558 39.130 0.00 0.00 0.00 3.01
468 503 3.013921 TCACCTTTTGCACTTTTCGACT 58.986 40.909 0.00 0.00 0.00 4.18
469 504 3.105937 GTCACCTTTTGCACTTTTCGAC 58.894 45.455 0.00 0.00 0.00 4.20
470 505 3.013921 AGTCACCTTTTGCACTTTTCGA 58.986 40.909 0.00 0.00 0.00 3.71
471 506 3.420839 AGTCACCTTTTGCACTTTTCG 57.579 42.857 0.00 0.00 0.00 3.46
472 507 7.770801 AAATAAGTCACCTTTTGCACTTTTC 57.229 32.000 0.00 0.00 31.80 2.29
473 508 7.973601 CAAAATAAGTCACCTTTTGCACTTTT 58.026 30.769 0.00 0.00 34.30 2.27
474 509 7.538303 CAAAATAAGTCACCTTTTGCACTTT 57.462 32.000 0.00 0.00 34.30 2.66
480 515 6.509358 CGTTTGGCAAAATAAGTCACCTTTTG 60.509 38.462 15.29 0.00 40.89 2.44
481 516 5.522097 CGTTTGGCAAAATAAGTCACCTTTT 59.478 36.000 15.29 0.00 31.89 2.27
482 517 5.047188 CGTTTGGCAAAATAAGTCACCTTT 58.953 37.500 15.29 0.00 31.89 3.11
483 518 4.500716 CCGTTTGGCAAAATAAGTCACCTT 60.501 41.667 15.29 0.00 34.56 3.50
484 519 3.005367 CCGTTTGGCAAAATAAGTCACCT 59.995 43.478 15.29 0.00 0.00 4.00
485 520 3.004944 TCCGTTTGGCAAAATAAGTCACC 59.995 43.478 15.29 0.00 34.14 4.02
486 521 3.978855 GTCCGTTTGGCAAAATAAGTCAC 59.021 43.478 15.29 0.00 34.14 3.67
487 522 3.004944 GGTCCGTTTGGCAAAATAAGTCA 59.995 43.478 15.29 0.00 34.14 3.41
488 523 3.571571 GGTCCGTTTGGCAAAATAAGTC 58.428 45.455 15.29 0.00 34.14 3.01
489 524 2.297880 GGGTCCGTTTGGCAAAATAAGT 59.702 45.455 15.29 0.00 34.14 2.24
490 525 2.297597 TGGGTCCGTTTGGCAAAATAAG 59.702 45.455 15.29 6.63 34.14 1.73
491 526 2.317040 TGGGTCCGTTTGGCAAAATAA 58.683 42.857 15.29 0.00 34.14 1.40
492 527 1.996798 TGGGTCCGTTTGGCAAAATA 58.003 45.000 15.29 0.00 34.14 1.40
493 528 1.123928 TTGGGTCCGTTTGGCAAAAT 58.876 45.000 15.29 0.00 34.14 1.82
494 529 0.175989 GTTGGGTCCGTTTGGCAAAA 59.824 50.000 15.29 0.00 34.14 2.44
495 530 0.684805 AGTTGGGTCCGTTTGGCAAA 60.685 50.000 8.93 8.93 34.14 3.68
496 531 0.684805 AAGTTGGGTCCGTTTGGCAA 60.685 50.000 0.00 0.00 34.14 4.52
497 532 0.183014 TAAGTTGGGTCCGTTTGGCA 59.817 50.000 0.00 0.00 34.14 4.92
498 533 1.541379 ATAAGTTGGGTCCGTTTGGC 58.459 50.000 0.00 0.00 34.14 4.52
499 534 4.329392 ACTTATAAGTTGGGTCCGTTTGG 58.671 43.478 12.50 0.00 35.21 3.28
500 535 4.998672 TGACTTATAAGTTGGGTCCGTTTG 59.001 41.667 18.96 0.00 39.88 2.93
501 536 5.231702 TGACTTATAAGTTGGGTCCGTTT 57.768 39.130 18.96 0.00 39.88 3.60
502 537 4.895668 TGACTTATAAGTTGGGTCCGTT 57.104 40.909 18.96 0.00 39.88 4.44
503 538 4.141779 GGATGACTTATAAGTTGGGTCCGT 60.142 45.833 18.96 6.84 39.88 4.69
504 539 4.377897 GGATGACTTATAAGTTGGGTCCG 58.622 47.826 18.96 0.00 39.88 4.79
505 540 4.165372 TGGGATGACTTATAAGTTGGGTCC 59.835 45.833 18.96 19.75 39.88 4.46
506 541 5.367945 TGGGATGACTTATAAGTTGGGTC 57.632 43.478 18.96 13.47 39.88 4.46
507 542 5.253096 AGTTGGGATGACTTATAAGTTGGGT 59.747 40.000 18.96 6.21 39.88 4.51
508 543 5.755849 AGTTGGGATGACTTATAAGTTGGG 58.244 41.667 18.96 0.00 39.88 4.12
509 544 8.980481 ATAAGTTGGGATGACTTATAAGTTGG 57.020 34.615 18.96 0.00 44.36 3.77
518 553 9.838339 CTTATGACTTATAAGTTGGGATGACTT 57.162 33.333 18.96 5.26 42.11 3.01
531 566 8.318412 TGGAGTGAAGCAACTTATGACTTATAA 58.682 33.333 0.00 0.00 0.00 0.98
532 567 7.847096 TGGAGTGAAGCAACTTATGACTTATA 58.153 34.615 0.00 0.00 0.00 0.98
533 568 6.711277 TGGAGTGAAGCAACTTATGACTTAT 58.289 36.000 0.00 0.00 0.00 1.73
534 569 6.109156 TGGAGTGAAGCAACTTATGACTTA 57.891 37.500 0.00 0.00 0.00 2.24
535 570 4.973168 TGGAGTGAAGCAACTTATGACTT 58.027 39.130 0.00 0.00 0.00 3.01
536 571 4.623932 TGGAGTGAAGCAACTTATGACT 57.376 40.909 0.00 0.00 0.00 3.41
537 572 4.757149 AGTTGGAGTGAAGCAACTTATGAC 59.243 41.667 0.00 0.00 34.63 3.06
538 573 4.973168 AGTTGGAGTGAAGCAACTTATGA 58.027 39.130 0.00 0.00 34.63 2.15
539 574 5.695851 AAGTTGGAGTGAAGCAACTTATG 57.304 39.130 0.32 0.00 43.44 1.90
540 575 7.817418 TTTAAGTTGGAGTGAAGCAACTTAT 57.183 32.000 6.91 0.00 44.43 1.73
541 576 7.338449 AGTTTTAAGTTGGAGTGAAGCAACTTA 59.662 33.333 3.95 3.95 43.44 2.24
542 577 6.152831 AGTTTTAAGTTGGAGTGAAGCAACTT 59.847 34.615 5.21 5.21 45.92 2.66
543 578 5.652452 AGTTTTAAGTTGGAGTGAAGCAACT 59.348 36.000 0.00 0.00 39.27 3.16
544 579 5.891451 AGTTTTAAGTTGGAGTGAAGCAAC 58.109 37.500 0.00 0.00 0.00 4.17
545 580 6.524101 AAGTTTTAAGTTGGAGTGAAGCAA 57.476 33.333 0.00 0.00 0.00 3.91
546 581 7.817418 ATAAGTTTTAAGTTGGAGTGAAGCA 57.183 32.000 0.00 0.00 0.00 3.91
547 582 9.827411 CTTATAAGTTTTAAGTTGGAGTGAAGC 57.173 33.333 4.18 0.00 0.00 3.86
554 589 9.519191 GGGGTAACTTATAAGTTTTAAGTTGGA 57.481 33.333 30.41 14.99 46.52 3.53
555 590 9.524496 AGGGGTAACTTATAAGTTTTAAGTTGG 57.476 33.333 30.41 5.54 46.52 3.77
561 596 9.364653 TGCAAAAGGGGTAACTTATAAGTTTTA 57.635 29.630 30.41 14.91 46.52 1.52
562 597 8.252624 TGCAAAAGGGGTAACTTATAAGTTTT 57.747 30.769 30.41 18.01 46.52 2.43
563 598 7.842887 TGCAAAAGGGGTAACTTATAAGTTT 57.157 32.000 30.41 17.24 46.52 2.66
565 600 6.379988 CCATGCAAAAGGGGTAACTTATAAGT 59.620 38.462 12.50 12.50 42.04 2.24
566 601 6.183360 CCCATGCAAAAGGGGTAACTTATAAG 60.183 42.308 11.05 11.05 45.54 1.73
567 602 5.659079 CCCATGCAAAAGGGGTAACTTATAA 59.341 40.000 13.05 0.00 45.54 0.98
568 603 5.205056 CCCATGCAAAAGGGGTAACTTATA 58.795 41.667 13.05 0.00 45.54 0.98
569 604 4.030216 CCCATGCAAAAGGGGTAACTTAT 58.970 43.478 13.05 0.00 45.54 1.73
570 605 3.436243 CCCATGCAAAAGGGGTAACTTA 58.564 45.455 13.05 0.00 45.54 2.24
571 606 2.256306 CCCATGCAAAAGGGGTAACTT 58.744 47.619 13.05 0.00 45.54 2.66
572 607 1.937191 CCCATGCAAAAGGGGTAACT 58.063 50.000 13.05 0.00 45.54 2.24
578 613 2.577749 GATGGGACCCATGCAAAAGGG 61.578 57.143 31.39 17.86 45.26 3.95
579 614 0.826062 GATGGGACCCATGCAAAAGG 59.174 55.000 31.39 0.00 45.26 3.11
580 615 1.205417 GTGATGGGACCCATGCAAAAG 59.795 52.381 31.39 0.00 45.26 2.27
581 616 1.265236 GTGATGGGACCCATGCAAAA 58.735 50.000 31.39 7.95 45.26 2.44
582 617 0.614415 GGTGATGGGACCCATGCAAA 60.614 55.000 31.39 10.49 45.26 3.68
583 618 1.000233 GGTGATGGGACCCATGCAA 60.000 57.895 31.39 13.08 45.26 4.08
584 619 1.508667 AAGGTGATGGGACCCATGCA 61.509 55.000 31.39 22.86 45.26 3.96
585 620 0.324645 AAAGGTGATGGGACCCATGC 60.325 55.000 31.39 21.14 45.26 4.06
586 621 2.025416 TGTAAAGGTGATGGGACCCATG 60.025 50.000 31.39 0.00 45.26 3.66
588 623 1.748732 TGTAAAGGTGATGGGACCCA 58.251 50.000 17.73 17.73 36.56 4.51
589 624 4.513406 TTATGTAAAGGTGATGGGACCC 57.487 45.455 2.45 2.45 36.56 4.46
590 625 6.844097 TTTTTATGTAAAGGTGATGGGACC 57.156 37.500 0.00 0.00 36.09 4.46
611 646 8.169977 TGAGCACATCTTTCTATCTTGTTTTT 57.830 30.769 0.00 0.00 0.00 1.94
612 647 7.663081 TCTGAGCACATCTTTCTATCTTGTTTT 59.337 33.333 0.00 0.00 0.00 2.43
613 648 7.164122 TCTGAGCACATCTTTCTATCTTGTTT 58.836 34.615 0.00 0.00 0.00 2.83
614 649 6.705302 TCTGAGCACATCTTTCTATCTTGTT 58.295 36.000 0.00 0.00 0.00 2.83
615 650 6.291648 TCTGAGCACATCTTTCTATCTTGT 57.708 37.500 0.00 0.00 0.00 3.16
616 651 6.985059 TCATCTGAGCACATCTTTCTATCTTG 59.015 38.462 0.00 0.00 0.00 3.02
617 652 6.985645 GTCATCTGAGCACATCTTTCTATCTT 59.014 38.462 0.00 0.00 0.00 2.40
618 653 6.324512 AGTCATCTGAGCACATCTTTCTATCT 59.675 38.462 0.00 0.00 0.00 1.98
619 654 6.514947 AGTCATCTGAGCACATCTTTCTATC 58.485 40.000 0.00 0.00 0.00 2.08
620 655 6.482898 AGTCATCTGAGCACATCTTTCTAT 57.517 37.500 0.00 0.00 0.00 1.98
621 656 5.929058 AGTCATCTGAGCACATCTTTCTA 57.071 39.130 0.00 0.00 0.00 2.10
622 657 4.822685 AGTCATCTGAGCACATCTTTCT 57.177 40.909 0.00 0.00 0.00 2.52
623 658 8.654230 TTATAAGTCATCTGAGCACATCTTTC 57.346 34.615 0.00 0.00 0.00 2.62
624 659 8.263640 ACTTATAAGTCATCTGAGCACATCTTT 58.736 33.333 12.50 0.00 32.86 2.52
625 660 7.790027 ACTTATAAGTCATCTGAGCACATCTT 58.210 34.615 12.50 0.00 32.86 2.40
626 661 7.358770 ACTTATAAGTCATCTGAGCACATCT 57.641 36.000 12.50 0.00 32.86 2.90
641 676 7.936847 TGTTTGGTTGTCATCTGACTTATAAGT 59.063 33.333 18.05 18.05 44.99 2.24
642 677 8.322906 TGTTTGGTTGTCATCTGACTTATAAG 57.677 34.615 11.05 11.05 44.99 1.73
643 678 8.684386 TTGTTTGGTTGTCATCTGACTTATAA 57.316 30.769 11.35 0.00 44.99 0.98
644 679 7.936847 ACTTGTTTGGTTGTCATCTGACTTATA 59.063 33.333 11.35 0.00 44.99 0.98
645 680 6.772716 ACTTGTTTGGTTGTCATCTGACTTAT 59.227 34.615 11.35 0.00 44.99 1.73
646 681 6.038161 CACTTGTTTGGTTGTCATCTGACTTA 59.962 38.462 11.35 0.00 44.99 2.24
647 682 4.949856 ACTTGTTTGGTTGTCATCTGACTT 59.050 37.500 11.35 0.00 44.99 3.01
648 683 4.336433 CACTTGTTTGGTTGTCATCTGACT 59.664 41.667 11.35 0.00 44.99 3.41
649 684 4.096382 ACACTTGTTTGGTTGTCATCTGAC 59.904 41.667 3.34 3.34 44.97 3.51
650 685 4.096231 CACACTTGTTTGGTTGTCATCTGA 59.904 41.667 0.00 0.00 0.00 3.27
651 686 4.096231 TCACACTTGTTTGGTTGTCATCTG 59.904 41.667 0.00 0.00 0.00 2.90
652 687 4.096382 GTCACACTTGTTTGGTTGTCATCT 59.904 41.667 0.00 0.00 0.00 2.90
653 688 4.096382 AGTCACACTTGTTTGGTTGTCATC 59.904 41.667 0.00 0.00 0.00 2.92
654 689 4.016444 AGTCACACTTGTTTGGTTGTCAT 58.984 39.130 0.00 0.00 0.00 3.06
655 690 3.417101 AGTCACACTTGTTTGGTTGTCA 58.583 40.909 0.00 0.00 0.00 3.58
656 691 4.434713 AAGTCACACTTGTTTGGTTGTC 57.565 40.909 0.00 0.00 37.00 3.18
657 692 7.338449 ACTTATAAGTCACACTTGTTTGGTTGT 59.662 33.333 12.50 0.00 39.11 3.32
658 693 7.703328 ACTTATAAGTCACACTTGTTTGGTTG 58.297 34.615 12.50 0.00 39.11 3.77
659 694 7.875327 ACTTATAAGTCACACTTGTTTGGTT 57.125 32.000 12.50 0.00 39.11 3.67
677 712 9.653287 CAGGTGACTTAAAATCAGTGACTTATA 57.347 33.333 0.00 0.00 40.21 0.98
678 713 8.375506 TCAGGTGACTTAAAATCAGTGACTTAT 58.624 33.333 0.00 0.00 40.21 1.73
679 714 7.656137 GTCAGGTGACTTAAAATCAGTGACTTA 59.344 37.037 16.19 0.00 41.65 2.24
680 715 6.483640 GTCAGGTGACTTAAAATCAGTGACTT 59.516 38.462 16.19 0.00 41.65 3.01
681 716 5.992217 GTCAGGTGACTTAAAATCAGTGACT 59.008 40.000 16.19 0.00 41.65 3.41
682 717 6.229561 GTCAGGTGACTTAAAATCAGTGAC 57.770 41.667 0.00 12.02 41.65 3.67
708 743 9.762381 TTGGTTCCAATAATTCACCTAACTTAT 57.238 29.630 0.00 0.00 0.00 1.73
709 744 9.589461 TTTGGTTCCAATAATTCACCTAACTTA 57.411 29.630 5.06 0.00 0.00 2.24
710 745 8.364894 GTTTGGTTCCAATAATTCACCTAACTT 58.635 33.333 5.06 0.00 39.04 2.66
711 746 7.507616 TGTTTGGTTCCAATAATTCACCTAACT 59.492 33.333 12.85 0.00 41.22 2.24
712 747 7.662897 TGTTTGGTTCCAATAATTCACCTAAC 58.337 34.615 5.06 6.92 41.10 2.34
713 748 7.039363 CCTGTTTGGTTCCAATAATTCACCTAA 60.039 37.037 5.06 0.00 0.00 2.69
714 749 6.435904 CCTGTTTGGTTCCAATAATTCACCTA 59.564 38.462 5.06 0.00 0.00 3.08
715 750 5.245977 CCTGTTTGGTTCCAATAATTCACCT 59.754 40.000 5.06 0.00 0.00 4.00
716 751 5.478407 CCTGTTTGGTTCCAATAATTCACC 58.522 41.667 5.06 0.00 0.00 4.02
717 752 4.929211 GCCTGTTTGGTTCCAATAATTCAC 59.071 41.667 5.06 0.71 38.35 3.18
718 753 4.020662 GGCCTGTTTGGTTCCAATAATTCA 60.021 41.667 5.06 1.06 38.35 2.57
719 754 4.503910 GGCCTGTTTGGTTCCAATAATTC 58.496 43.478 5.06 0.00 38.35 2.17
720 755 3.263170 GGGCCTGTTTGGTTCCAATAATT 59.737 43.478 0.84 0.00 38.35 1.40
721 756 2.837591 GGGCCTGTTTGGTTCCAATAAT 59.162 45.455 0.84 0.00 38.35 1.28
722 757 2.158234 AGGGCCTGTTTGGTTCCAATAA 60.158 45.455 4.50 0.00 38.35 1.40
723 758 1.431243 AGGGCCTGTTTGGTTCCAATA 59.569 47.619 4.50 0.00 38.35 1.90
724 759 0.190815 AGGGCCTGTTTGGTTCCAAT 59.809 50.000 4.50 0.00 38.35 3.16
725 760 0.854218 TAGGGCCTGTTTGGTTCCAA 59.146 50.000 18.53 0.00 38.35 3.53
726 761 0.854218 TTAGGGCCTGTTTGGTTCCA 59.146 50.000 18.53 0.00 38.35 3.53
727 762 1.254026 GTTAGGGCCTGTTTGGTTCC 58.746 55.000 18.53 0.00 38.35 3.62
728 763 1.611977 GTGTTAGGGCCTGTTTGGTTC 59.388 52.381 18.53 0.00 38.35 3.62
729 764 1.216930 AGTGTTAGGGCCTGTTTGGTT 59.783 47.619 18.53 0.00 38.35 3.67
730 765 0.850784 AGTGTTAGGGCCTGTTTGGT 59.149 50.000 18.53 0.00 38.35 3.67
731 766 1.534729 GAGTGTTAGGGCCTGTTTGG 58.465 55.000 18.53 0.00 39.35 3.28
732 767 1.534729 GGAGTGTTAGGGCCTGTTTG 58.465 55.000 18.53 0.00 0.00 2.93
733 768 0.404426 GGGAGTGTTAGGGCCTGTTT 59.596 55.000 18.53 0.00 0.00 2.83
734 769 0.770557 TGGGAGTGTTAGGGCCTGTT 60.771 55.000 18.53 0.00 0.00 3.16
735 770 0.770557 TTGGGAGTGTTAGGGCCTGT 60.771 55.000 18.53 0.00 0.00 4.00
736 771 0.404040 TTTGGGAGTGTTAGGGCCTG 59.596 55.000 18.53 0.00 0.00 4.85
737 772 1.154430 TTTTGGGAGTGTTAGGGCCT 58.846 50.000 12.58 12.58 0.00 5.19
738 773 2.231716 ATTTTGGGAGTGTTAGGGCC 57.768 50.000 0.00 0.00 0.00 5.80
739 774 3.056107 GGAAATTTTGGGAGTGTTAGGGC 60.056 47.826 0.00 0.00 0.00 5.19
740 775 3.192633 CGGAAATTTTGGGAGTGTTAGGG 59.807 47.826 0.00 0.00 0.00 3.53
741 776 3.366985 GCGGAAATTTTGGGAGTGTTAGG 60.367 47.826 0.00 0.00 0.00 2.69
742 777 3.254657 TGCGGAAATTTTGGGAGTGTTAG 59.745 43.478 0.00 0.00 0.00 2.34
743 778 3.223435 TGCGGAAATTTTGGGAGTGTTA 58.777 40.909 0.00 0.00 0.00 2.41
746 781 2.493278 AGATGCGGAAATTTTGGGAGTG 59.507 45.455 0.00 0.00 0.00 3.51
749 784 5.730296 TTAAAGATGCGGAAATTTTGGGA 57.270 34.783 0.00 0.00 0.00 4.37
889 936 4.332683 AATACTGTGGGAGTCCAGTCTA 57.667 45.455 12.30 0.00 45.05 2.59
1111 1166 1.140375 CGAAGTGGCGGTACCCTAC 59.860 63.158 6.25 7.51 37.83 3.18
1218 1273 1.558756 AGCTTGGAGGTGATGAAGAGG 59.441 52.381 0.00 0.00 0.00 3.69
1313 1368 0.926846 GCGAAATCTGAGGAAGAGCG 59.073 55.000 0.00 0.00 38.67 5.03
1314 1369 2.307934 AGCGAAATCTGAGGAAGAGC 57.692 50.000 0.00 0.00 38.67 4.09
1373 1436 2.352034 ACTATCTCAGTGCTACACGACG 59.648 50.000 0.00 0.00 39.64 5.12
1438 1501 5.323581 TCAGATTGACAATTGGTTCCATGA 58.676 37.500 10.83 4.64 0.00 3.07
1458 1521 0.095935 CTTCAGCGGCGATTGTTCAG 59.904 55.000 12.98 2.95 0.00 3.02
1467 1530 1.573829 TAGGTTTTGCTTCAGCGGCG 61.574 55.000 0.51 0.51 45.83 6.46
1499 1562 9.504708 AGCGTAGTAGTATTATGTATGTCTCTT 57.495 33.333 0.00 0.00 0.00 2.85
1545 1614 6.487668 TGGAGTACTACGCTATGCAATTAGTA 59.512 38.462 0.00 0.00 0.00 1.82
1548 1617 5.777850 TGGAGTACTACGCTATGCAATTA 57.222 39.130 0.00 0.00 0.00 1.40
1559 1628 1.808945 ACGGTCAGTTGGAGTACTACG 59.191 52.381 0.00 0.00 0.00 3.51
1560 1629 3.930634 AACGGTCAGTTGGAGTACTAC 57.069 47.619 0.00 0.00 42.39 2.73
1579 1648 9.807921 ATTTTACTCCTTCCTAGTGATTTTCAA 57.192 29.630 0.00 0.00 0.00 2.69
1581 1650 8.678199 CCATTTTACTCCTTCCTAGTGATTTTC 58.322 37.037 0.00 0.00 0.00 2.29
1582 1651 7.615757 CCCATTTTACTCCTTCCTAGTGATTTT 59.384 37.037 0.00 0.00 0.00 1.82
1586 1655 4.080526 GCCCATTTTACTCCTTCCTAGTGA 60.081 45.833 0.00 0.00 0.00 3.41
1588 1657 4.112331 AGCCCATTTTACTCCTTCCTAGT 58.888 43.478 0.00 0.00 0.00 2.57
1601 1674 1.276989 CATGCCTGTCAAGCCCATTTT 59.723 47.619 0.00 0.00 0.00 1.82
1609 1682 2.535485 TACCCGGCATGCCTGTCAAG 62.535 60.000 33.07 16.90 0.00 3.02
1631 1704 2.261430 TACGGCCTCTAGACCAGCGA 62.261 60.000 0.00 0.00 0.00 4.93
1641 1730 2.180276 AGTGACAATCTTACGGCCTCT 58.820 47.619 0.00 0.00 0.00 3.69
1743 1832 3.837146 AGATCAGTCTGGTGTGTGAGAAT 59.163 43.478 0.00 0.00 32.13 2.40
1757 1846 4.159321 TCAGGTTGTCAGATCAGATCAGTC 59.841 45.833 13.14 3.35 0.00 3.51
1810 1899 3.684305 GGAATTGCAATGTTGGCTTTACC 59.316 43.478 13.82 1.11 39.84 2.85
1864 1956 4.061596 CTGTATTTGGAGCTAGCTAAGGC 58.938 47.826 19.38 4.74 39.06 4.35
1865 1957 5.537300 TCTGTATTTGGAGCTAGCTAAGG 57.463 43.478 19.38 1.56 0.00 2.69
1866 1958 6.753180 TGATCTGTATTTGGAGCTAGCTAAG 58.247 40.000 19.38 5.64 0.00 2.18
1867 1959 6.731292 TGATCTGTATTTGGAGCTAGCTAA 57.269 37.500 19.38 9.24 0.00 3.09
1868 1960 6.731292 TTGATCTGTATTTGGAGCTAGCTA 57.269 37.500 19.38 1.43 0.00 3.32
1869 1961 5.620738 TTGATCTGTATTTGGAGCTAGCT 57.379 39.130 19.45 19.45 0.00 3.32
1910 2002 0.109272 ACAGTGCACGTCGATCGATT 60.109 50.000 22.50 8.80 42.86 3.34
1990 2122 0.887247 TGCGCCGTGGTTAAGTAGTA 59.113 50.000 4.18 0.00 0.00 1.82
1991 2123 0.248289 ATGCGCCGTGGTTAAGTAGT 59.752 50.000 4.18 0.00 0.00 2.73
1992 2124 0.928229 GATGCGCCGTGGTTAAGTAG 59.072 55.000 4.18 0.00 0.00 2.57
2232 2364 0.033991 CGAAGGAGAGGAGGGTCTCA 60.034 60.000 3.44 0.00 44.29 3.27
2287 2419 8.090788 ACATTAGTTGGATGTATGTAAGGAGT 57.909 34.615 0.00 0.00 36.04 3.85
2288 2420 8.964476 AACATTAGTTGGATGTATGTAAGGAG 57.036 34.615 0.00 0.00 36.76 3.69
2317 2454 9.657419 ATGTATGATCGATCTGCATTGTTTATA 57.343 29.630 25.02 8.50 0.00 0.98
2323 2460 7.221645 GGTAGTATGTATGATCGATCTGCATTG 59.778 40.741 25.02 0.00 0.00 2.82
2327 2464 6.030849 GTGGTAGTATGTATGATCGATCTGC 58.969 44.000 25.02 15.15 0.00 4.26
2330 2467 6.418585 TCGTGGTAGTATGTATGATCGATC 57.581 41.667 18.72 18.72 0.00 3.69
2331 2468 6.430308 ACTTCGTGGTAGTATGTATGATCGAT 59.570 38.462 0.00 0.00 0.00 3.59
2333 2470 5.851703 CACTTCGTGGTAGTATGTATGATCG 59.148 44.000 0.00 0.00 0.00 3.69
2343 2480 3.884693 TCACTTGTCACTTCGTGGTAGTA 59.115 43.478 0.00 0.00 33.87 1.82
2349 2486 2.535984 GTCACTCACTTGTCACTTCGTG 59.464 50.000 0.00 0.00 34.45 4.35
2351 2488 2.791560 CAGTCACTCACTTGTCACTTCG 59.208 50.000 0.00 0.00 30.26 3.79
2353 2490 4.141846 ACATCAGTCACTCACTTGTCACTT 60.142 41.667 0.00 0.00 30.26 3.16
2354 2491 3.386078 ACATCAGTCACTCACTTGTCACT 59.614 43.478 0.00 0.00 30.26 3.41
2355 2492 3.492383 CACATCAGTCACTCACTTGTCAC 59.508 47.826 0.00 0.00 30.26 3.67
2356 2493 3.721035 CACATCAGTCACTCACTTGTCA 58.279 45.455 0.00 0.00 30.26 3.58
2357 2494 2.478134 GCACATCAGTCACTCACTTGTC 59.522 50.000 0.00 0.00 30.26 3.18
2358 2495 2.487934 GCACATCAGTCACTCACTTGT 58.512 47.619 0.00 0.00 30.26 3.16
2359 2496 1.802960 GGCACATCAGTCACTCACTTG 59.197 52.381 0.00 0.00 30.26 3.16
2378 2515 0.604578 CACCTCCACCTGCAAAATGG 59.395 55.000 4.50 4.50 34.58 3.16
2520 2657 3.453070 GATCTCCTGCAGGACGCCC 62.453 68.421 32.00 16.34 39.78 6.13
2673 2810 4.504916 CTGCGGTGCTCCTCCTCG 62.505 72.222 2.85 0.00 0.00 4.63
2697 2834 4.838152 TTGCGCTGCGGGATCTCC 62.838 66.667 24.61 5.38 0.00 3.71
2784 2921 5.699143 TCTCCAGTGATCACTCATATCTCA 58.301 41.667 25.58 1.97 40.20 3.27
2796 2933 1.145819 GCCAGCCTCTCCAGTGATC 59.854 63.158 0.00 0.00 0.00 2.92
2797 2934 1.306825 AGCCAGCCTCTCCAGTGAT 60.307 57.895 0.00 0.00 0.00 3.06
2798 2935 2.121385 AGCCAGCCTCTCCAGTGA 59.879 61.111 0.00 0.00 0.00 3.41
2801 2938 4.486503 GCCAGCCAGCCTCTCCAG 62.487 72.222 0.00 0.00 0.00 3.86
2822 2959 2.280524 CCAACAGAACCCGTCGCA 60.281 61.111 0.00 0.00 0.00 5.10
2825 2962 0.464916 ACAACCCAACAGAACCCGTC 60.465 55.000 0.00 0.00 0.00 4.79
2829 2966 1.886542 GGATGACAACCCAACAGAACC 59.113 52.381 0.00 0.00 0.00 3.62
2832 2969 2.488891 CCAAGGATGACAACCCAACAGA 60.489 50.000 0.00 0.00 0.00 3.41
2833 2970 1.888512 CCAAGGATGACAACCCAACAG 59.111 52.381 0.00 0.00 0.00 3.16
2834 2971 1.993956 CCAAGGATGACAACCCAACA 58.006 50.000 0.00 0.00 0.00 3.33
2835 2972 0.603065 GCCAAGGATGACAACCCAAC 59.397 55.000 0.00 0.00 0.00 3.77
2837 2974 1.076549 GGCCAAGGATGACAACCCA 59.923 57.895 0.00 0.00 0.00 4.51
2840 2977 0.819582 CCATGGCCAAGGATGACAAC 59.180 55.000 22.97 0.00 0.00 3.32
2841 2978 0.703488 TCCATGGCCAAGGATGACAA 59.297 50.000 25.76 2.31 0.00 3.18
2933 3096 7.495055 TCCTTAAATCCGGTAGTAAACATCTC 58.505 38.462 0.00 0.00 0.00 2.75
2945 3108 6.894103 TCTTAGTAACTCTCCTTAAATCCGGT 59.106 38.462 0.00 0.00 0.00 5.28
2965 3128 7.242322 TGATGAGATGATCCCAATCTCTTAG 57.758 40.000 17.70 0.00 40.92 2.18
2974 3137 7.555195 GCATAATAACATGATGAGATGATCCCA 59.445 37.037 0.00 0.00 0.00 4.37
3027 3190 4.162131 ACCTTCTTTTTGTTCTGCCATTGT 59.838 37.500 0.00 0.00 0.00 2.71
3031 3194 3.096092 ACACCTTCTTTTTGTTCTGCCA 58.904 40.909 0.00 0.00 0.00 4.92
3044 3207 8.090788 TGCCTCTCTTTATTTATACACCTTCT 57.909 34.615 0.00 0.00 0.00 2.85
3045 3208 7.041712 GCTGCCTCTCTTTATTTATACACCTTC 60.042 40.741 0.00 0.00 0.00 3.46
3048 3211 5.177696 CGCTGCCTCTCTTTATTTATACACC 59.822 44.000 0.00 0.00 0.00 4.16
3049 3212 5.177696 CCGCTGCCTCTCTTTATTTATACAC 59.822 44.000 0.00 0.00 0.00 2.90
3050 3213 5.297547 CCGCTGCCTCTCTTTATTTATACA 58.702 41.667 0.00 0.00 0.00 2.29
3051 3214 4.152580 GCCGCTGCCTCTCTTTATTTATAC 59.847 45.833 0.00 0.00 0.00 1.47
3052 3215 4.315803 GCCGCTGCCTCTCTTTATTTATA 58.684 43.478 0.00 0.00 0.00 0.98
3053 3216 3.142174 GCCGCTGCCTCTCTTTATTTAT 58.858 45.455 0.00 0.00 0.00 1.40
3128 3303 1.608055 CAGTTGCTTGGTCATGTCCA 58.392 50.000 7.66 7.66 35.49 4.02
3133 3308 0.606401 CGGTCCAGTTGCTTGGTCAT 60.606 55.000 3.06 0.00 39.35 3.06
3137 3312 1.898574 AAGCGGTCCAGTTGCTTGG 60.899 57.895 1.36 0.00 46.46 3.61
3148 3323 3.741476 CAAGCCTGGCAAGCGGTC 61.741 66.667 22.65 0.00 34.64 4.79
3164 3339 2.436173 TGCCACCCATTATCATACGACA 59.564 45.455 0.00 0.00 0.00 4.35
3165 3340 3.067106 CTGCCACCCATTATCATACGAC 58.933 50.000 0.00 0.00 0.00 4.34
3168 3343 3.077359 GCTCTGCCACCCATTATCATAC 58.923 50.000 0.00 0.00 0.00 2.39
3171 3346 0.918258 TGCTCTGCCACCCATTATCA 59.082 50.000 0.00 0.00 0.00 2.15
3172 3347 1.602311 CTGCTCTGCCACCCATTATC 58.398 55.000 0.00 0.00 0.00 1.75
3173 3348 0.466922 GCTGCTCTGCCACCCATTAT 60.467 55.000 0.00 0.00 0.00 1.28
3308 3483 1.300233 CGCCGATCAAGAGCTACCC 60.300 63.158 0.00 0.00 0.00 3.69
3327 3502 1.288127 GTCGTGCTAGTCACCCGTT 59.712 57.895 10.44 0.00 42.69 4.44
3328 3503 2.633509 GGTCGTGCTAGTCACCCGT 61.634 63.158 10.44 0.00 42.69 5.28
3425 4019 9.020731 AGTACTGAATTTTTGGGATTCGTTTAT 57.979 29.630 0.00 0.00 36.52 1.40
3455 4049 4.453751 GGTAGTAGTAGCAGACTAGCAGT 58.546 47.826 1.82 0.00 43.16 4.40
3458 4052 3.818180 TGGGTAGTAGTAGCAGACTAGC 58.182 50.000 8.94 3.28 41.47 3.42
3504 4098 5.247110 AGAACTAACAGACATGGACATCAGT 59.753 40.000 0.00 0.00 0.00 3.41
3534 4128 5.147162 CCTTTTTCGTTTGAATTCTCGGAG 58.853 41.667 7.05 0.00 33.20 4.63
3550 4144 5.582689 ATGCTTAGTGTATGCCCTTTTTC 57.417 39.130 0.00 0.00 0.00 2.29
3633 4227 4.515191 TGATTTGTGTTACACTGGCTTCTC 59.485 41.667 16.79 4.86 35.11 2.87
3635 4229 4.829064 TGATTTGTGTTACACTGGCTTC 57.171 40.909 16.79 7.17 35.11 3.86
3639 4233 7.040755 TGGAGTATTTGATTTGTGTTACACTGG 60.041 37.037 16.79 0.00 35.11 4.00
3643 4237 7.504238 ACCTTGGAGTATTTGATTTGTGTTACA 59.496 33.333 0.00 0.00 0.00 2.41
3644 4238 7.882179 ACCTTGGAGTATTTGATTTGTGTTAC 58.118 34.615 0.00 0.00 0.00 2.50
3645 4239 7.175990 GGACCTTGGAGTATTTGATTTGTGTTA 59.824 37.037 0.00 0.00 0.00 2.41
3646 4240 6.015434 GGACCTTGGAGTATTTGATTTGTGTT 60.015 38.462 0.00 0.00 0.00 3.32
3648 4242 5.476599 TGGACCTTGGAGTATTTGATTTGTG 59.523 40.000 0.00 0.00 0.00 3.33
3686 5667 8.195436 TGAGTAATTAAGTCCCAGACGATTAAG 58.805 37.037 0.00 0.00 37.67 1.85
3688 5670 7.649533 TGAGTAATTAAGTCCCAGACGATTA 57.350 36.000 0.00 0.00 37.67 1.75
3717 5699 9.630098 CAATGCTTACTTTTGAATGTATTCAGT 57.370 29.630 7.30 5.59 46.34 3.41
3718 5700 9.079833 CCAATGCTTACTTTTGAATGTATTCAG 57.920 33.333 7.30 0.34 46.34 3.02
3719 5701 8.034215 CCCAATGCTTACTTTTGAATGTATTCA 58.966 33.333 3.28 3.28 44.42 2.57
3720 5702 8.034804 ACCCAATGCTTACTTTTGAATGTATTC 58.965 33.333 0.00 0.00 37.31 1.75
3721 5703 7.906327 ACCCAATGCTTACTTTTGAATGTATT 58.094 30.769 0.00 0.00 0.00 1.89
3722 5704 7.480760 ACCCAATGCTTACTTTTGAATGTAT 57.519 32.000 0.00 0.00 0.00 2.29
3723 5705 6.909550 ACCCAATGCTTACTTTTGAATGTA 57.090 33.333 0.00 0.00 0.00 2.29
3724 5706 5.806654 ACCCAATGCTTACTTTTGAATGT 57.193 34.783 0.00 0.00 0.00 2.71
3725 5707 5.106987 GCAACCCAATGCTTACTTTTGAATG 60.107 40.000 0.00 0.00 43.06 2.67
3726 5708 4.996758 GCAACCCAATGCTTACTTTTGAAT 59.003 37.500 0.00 0.00 43.06 2.57
3727 5709 4.376146 GCAACCCAATGCTTACTTTTGAA 58.624 39.130 0.00 0.00 43.06 2.69
3728 5710 3.988819 GCAACCCAATGCTTACTTTTGA 58.011 40.909 0.00 0.00 43.06 2.69
3738 5720 2.137523 CAAACTGAAGCAACCCAATGC 58.862 47.619 0.00 0.00 46.78 3.56
3739 5721 2.548493 CCCAAACTGAAGCAACCCAATG 60.548 50.000 0.00 0.00 0.00 2.82
3740 5722 1.693606 CCCAAACTGAAGCAACCCAAT 59.306 47.619 0.00 0.00 0.00 3.16
3741 5723 1.118838 CCCAAACTGAAGCAACCCAA 58.881 50.000 0.00 0.00 0.00 4.12
3742 5724 0.758685 CCCCAAACTGAAGCAACCCA 60.759 55.000 0.00 0.00 0.00 4.51
3743 5725 0.469144 TCCCCAAACTGAAGCAACCC 60.469 55.000 0.00 0.00 0.00 4.11
3744 5726 1.341209 CTTCCCCAAACTGAAGCAACC 59.659 52.381 0.00 0.00 32.37 3.77
3745 5727 1.341209 CCTTCCCCAAACTGAAGCAAC 59.659 52.381 0.00 0.00 37.29 4.17
3746 5728 1.063266 ACCTTCCCCAAACTGAAGCAA 60.063 47.619 0.00 0.00 37.29 3.91
3747 5729 0.555769 ACCTTCCCCAAACTGAAGCA 59.444 50.000 0.00 0.00 37.29 3.91
3748 5730 0.961753 CACCTTCCCCAAACTGAAGC 59.038 55.000 0.00 0.00 37.29 3.86
3749 5731 2.158608 AGTCACCTTCCCCAAACTGAAG 60.159 50.000 0.00 0.00 38.14 3.02
3750 5732 1.850345 AGTCACCTTCCCCAAACTGAA 59.150 47.619 0.00 0.00 0.00 3.02
3751 5733 1.142870 CAGTCACCTTCCCCAAACTGA 59.857 52.381 0.00 0.00 36.99 3.41
3752 5734 1.609208 CAGTCACCTTCCCCAAACTG 58.391 55.000 0.00 0.00 0.00 3.16
3753 5735 0.178990 GCAGTCACCTTCCCCAAACT 60.179 55.000 0.00 0.00 0.00 2.66
3754 5736 1.179174 GGCAGTCACCTTCCCCAAAC 61.179 60.000 0.00 0.00 0.00 2.93
3755 5737 1.152830 GGCAGTCACCTTCCCCAAA 59.847 57.895 0.00 0.00 0.00 3.28
3756 5738 0.474854 TAGGCAGTCACCTTCCCCAA 60.475 55.000 0.00 0.00 41.50 4.12
3757 5739 0.909610 CTAGGCAGTCACCTTCCCCA 60.910 60.000 0.00 0.00 41.50 4.96
3758 5740 0.617820 TCTAGGCAGTCACCTTCCCC 60.618 60.000 0.00 0.00 41.50 4.81
3759 5741 1.276622 TTCTAGGCAGTCACCTTCCC 58.723 55.000 0.00 0.00 41.50 3.97
3760 5742 2.701107 GTTTCTAGGCAGTCACCTTCC 58.299 52.381 0.00 0.00 41.50 3.46
3761 5743 2.338500 CGTTTCTAGGCAGTCACCTTC 58.662 52.381 0.00 0.00 41.50 3.46
3762 5744 1.608283 GCGTTTCTAGGCAGTCACCTT 60.608 52.381 0.00 0.00 41.50 3.50
3763 5745 0.037232 GCGTTTCTAGGCAGTCACCT 60.037 55.000 0.00 0.00 44.31 4.00
3764 5746 1.019805 GGCGTTTCTAGGCAGTCACC 61.020 60.000 0.00 0.00 36.89 4.02
3765 5747 0.320421 TGGCGTTTCTAGGCAGTCAC 60.320 55.000 0.00 0.00 39.30 3.67
3766 5748 0.394938 TTGGCGTTTCTAGGCAGTCA 59.605 50.000 0.00 0.00 44.87 3.41
3767 5749 1.079503 CTTGGCGTTTCTAGGCAGTC 58.920 55.000 0.00 0.00 44.87 3.51
3768 5750 0.955919 GCTTGGCGTTTCTAGGCAGT 60.956 55.000 0.00 0.00 44.87 4.40
3769 5751 0.674895 AGCTTGGCGTTTCTAGGCAG 60.675 55.000 0.00 0.00 44.87 4.85
3770 5752 0.673644 GAGCTTGGCGTTTCTAGGCA 60.674 55.000 0.00 0.00 42.55 4.75
3771 5753 0.391793 AGAGCTTGGCGTTTCTAGGC 60.392 55.000 0.00 0.00 34.46 3.93
3772 5754 2.100605 AAGAGCTTGGCGTTTCTAGG 57.899 50.000 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.