Multiple sequence alignment - TraesCS4A01G071400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G071400 chr4A 100.000 3911 0 0 1 3911 68688176 68692086 0.000000e+00 7223.0
1 TraesCS4A01G071400 chr4A 95.476 420 14 5 3494 3911 545941016 545941432 0.000000e+00 665.0
2 TraesCS4A01G071400 chr4A 84.672 137 11 6 494 620 654143949 654143813 1.140000e-25 128.0
3 TraesCS4A01G071400 chr4B 84.696 3620 241 139 1 3483 475810025 475813468 0.000000e+00 3326.0
4 TraesCS4A01G071400 chr4B 85.926 135 11 4 494 620 1803562 1803428 1.900000e-28 137.0
5 TraesCS4A01G071400 chr4D 90.332 1986 96 45 1488 3411 387442028 387443979 0.000000e+00 2516.0
6 TraesCS4A01G071400 chr4D 86.787 1438 83 38 1 1375 387440565 387441958 0.000000e+00 1504.0
7 TraesCS4A01G071400 chr4D 95.204 417 13 4 3501 3911 357123623 357123208 0.000000e+00 652.0
8 TraesCS4A01G071400 chr4D 93.990 416 17 5 3501 3911 357116438 357116026 1.190000e-174 623.0
9 TraesCS4A01G071400 chr3D 96.386 415 11 4 3501 3911 383623538 383623952 0.000000e+00 680.0
10 TraesCS4A01G071400 chr3D 95.683 417 12 4 3501 3911 533437591 533438007 0.000000e+00 665.0
11 TraesCS4A01G071400 chr1A 94.762 420 18 4 3494 3911 153511006 153511423 0.000000e+00 651.0
12 TraesCS4A01G071400 chr1A 94.484 417 14 7 3502 3911 38522476 38522890 5.510000e-178 634.0
13 TraesCS4A01G071400 chr2D 94.903 412 18 2 3501 3911 115991426 115991017 3.290000e-180 641.0
14 TraesCS4A01G071400 chr2D 81.319 182 30 4 1189 1368 523028585 523028764 1.130000e-30 145.0
15 TraesCS4A01G071400 chr3A 94.258 418 15 7 3501 3911 630875273 630874858 7.130000e-177 630.0
16 TraesCS4A01G071400 chr6B 85.644 404 28 13 238 620 33444286 33444680 7.870000e-107 398.0
17 TraesCS4A01G071400 chr6B 85.926 135 11 4 494 620 97522203 97522069 1.900000e-28 137.0
18 TraesCS4A01G071400 chr6B 84.211 95 15 0 1275 1369 502484242 502484148 4.160000e-15 93.5
19 TraesCS4A01G071400 chr7B 82.921 404 39 11 238 620 618473290 618473684 1.740000e-88 337.0
20 TraesCS4A01G071400 chr7B 85.926 135 11 4 494 620 63521013 63520879 1.900000e-28 137.0
21 TraesCS4A01G071400 chr2A 81.319 182 30 4 1189 1368 668242838 668243017 1.130000e-30 145.0
22 TraesCS4A01G071400 chr3B 85.926 135 11 6 494 620 527366646 527366512 1.900000e-28 137.0
23 TraesCS4A01G071400 chr2B 80.328 183 30 5 1189 1368 616934686 616934865 2.450000e-27 134.0
24 TraesCS4A01G071400 chr6A 85.263 95 14 0 1275 1369 457686099 457686193 8.940000e-17 99.0
25 TraesCS4A01G071400 chr6D 83.908 87 14 0 1283 1369 320228345 320228431 2.500000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G071400 chr4A 68688176 68692086 3910 False 7223 7223 100.0000 1 3911 1 chr4A.!!$F1 3910
1 TraesCS4A01G071400 chr4B 475810025 475813468 3443 False 3326 3326 84.6960 1 3483 1 chr4B.!!$F1 3482
2 TraesCS4A01G071400 chr4D 387440565 387443979 3414 False 2010 2516 88.5595 1 3411 2 chr4D.!!$F1 3410

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
163 181 0.113190 CTCTTTCACCTTTGCCCCCT 59.887 55.0 0.00 0.0 0.0 4.79 F
1439 1553 0.179156 GTTCACCGCCGAATCGAGTA 60.179 55.0 3.36 0.0 0.0 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1507 1626 0.035152 AGAAACCATCCAGCATCGCA 60.035 50.0 0.0 0.0 0.0 5.10 R
3270 3472 0.110486 ACCCAGAGCAATCAACCGTT 59.890 50.0 0.0 0.0 0.0 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.335729 TGCGCACCAGCAAATGTG 59.664 55.556 5.66 0.00 45.06 3.21
83 84 3.668656 CGAGGAAAAACGGAAAAAGCATC 59.331 43.478 0.00 0.00 0.00 3.91
95 96 1.859302 AAAGCATCGAGGAGAGGAGT 58.141 50.000 0.00 0.00 31.12 3.85
99 114 1.826054 ATCGAGGAGAGGAGTGCCG 60.826 63.158 0.00 0.00 39.96 5.69
140 155 2.753369 GGCAAATGGCGAATTGGTG 58.247 52.632 0.00 0.00 46.16 4.17
141 156 0.246086 GGCAAATGGCGAATTGGTGA 59.754 50.000 0.00 0.00 46.16 4.02
144 159 2.867429 CAAATGGCGAATTGGTGAGAC 58.133 47.619 0.00 0.00 0.00 3.36
146 161 2.029838 ATGGCGAATTGGTGAGACTC 57.970 50.000 0.00 0.00 0.00 3.36
150 168 2.416893 GGCGAATTGGTGAGACTCTTTC 59.583 50.000 3.68 0.00 0.00 2.62
159 177 2.550180 GTGAGACTCTTTCACCTTTGCC 59.450 50.000 3.68 0.00 39.17 4.52
162 180 0.178961 ACTCTTTCACCTTTGCCCCC 60.179 55.000 0.00 0.00 0.00 5.40
163 181 0.113190 CTCTTTCACCTTTGCCCCCT 59.887 55.000 0.00 0.00 0.00 4.79
164 182 0.560688 TCTTTCACCTTTGCCCCCTT 59.439 50.000 0.00 0.00 0.00 3.95
165 183 0.969149 CTTTCACCTTTGCCCCCTTC 59.031 55.000 0.00 0.00 0.00 3.46
166 184 0.560688 TTTCACCTTTGCCCCCTTCT 59.439 50.000 0.00 0.00 0.00 2.85
167 185 0.560688 TTCACCTTTGCCCCCTTCTT 59.439 50.000 0.00 0.00 0.00 2.52
211 248 3.788766 GCACGCACGGGTCATGAC 61.789 66.667 17.91 17.91 0.00 3.06
265 303 0.815615 GTAGCTTCTTCCATGCCCCG 60.816 60.000 0.00 0.00 0.00 5.73
372 417 1.060937 GACGATGATTGCACGCCAC 59.939 57.895 0.00 0.00 0.00 5.01
414 459 0.666274 TGGCGTGTCACATCTTCGTC 60.666 55.000 3.42 0.00 0.00 4.20
433 478 4.806775 TCGTCATATTAACGGGTGAATGTG 59.193 41.667 7.38 0.50 40.45 3.21
434 479 4.806775 CGTCATATTAACGGGTGAATGTGA 59.193 41.667 4.70 4.70 36.51 3.58
435 480 5.465390 CGTCATATTAACGGGTGAATGTGAT 59.535 40.000 10.41 0.00 36.15 3.06
436 481 6.018262 CGTCATATTAACGGGTGAATGTGATT 60.018 38.462 10.41 0.00 36.15 2.57
437 482 7.170151 CGTCATATTAACGGGTGAATGTGATTA 59.830 37.037 10.41 0.00 36.15 1.75
438 483 8.999431 GTCATATTAACGGGTGAATGTGATTAT 58.001 33.333 10.41 0.00 36.15 1.28
439 484 8.998377 TCATATTAACGGGTGAATGTGATTATG 58.002 33.333 4.70 0.00 30.88 1.90
440 485 8.783093 CATATTAACGGGTGAATGTGATTATGT 58.217 33.333 0.61 0.00 0.00 2.29
450 495 3.666883 TGTGATTATGTAAAAGGCGCG 57.333 42.857 0.00 0.00 0.00 6.86
453 498 2.286833 TGATTATGTAAAAGGCGCGCTC 59.713 45.455 32.29 20.89 0.00 5.03
455 500 1.948104 TATGTAAAAGGCGCGCTCAT 58.052 45.000 32.29 23.58 0.00 2.90
462 507 0.463654 AAGGCGCGCTCATTGGATAA 60.464 50.000 32.29 0.00 0.00 1.75
463 508 0.882042 AGGCGCGCTCATTGGATAAG 60.882 55.000 32.29 0.00 0.00 1.73
467 512 1.261619 CGCGCTCATTGGATAAGAACC 59.738 52.381 5.56 0.00 0.00 3.62
503 554 0.817229 GGTGGAGCAATCTAGGCAGC 60.817 60.000 0.00 0.00 0.00 5.25
553 608 8.370940 TCCATTCACTTGTTCAGATATCTATCC 58.629 37.037 4.54 0.00 33.17 2.59
557 612 8.996651 TCACTTGTTCAGATATCTATCCAGTA 57.003 34.615 4.54 0.00 33.17 2.74
576 631 7.514721 TCCAGTACAAAGTAACAAGAATTCCT 58.485 34.615 0.65 0.00 0.00 3.36
590 646 9.996554 AACAAGAATTCCTTATTTGTAAAAGGG 57.003 29.630 9.62 0.00 42.20 3.95
694 767 2.044946 GGCATGTGTGGGAGGGAC 60.045 66.667 0.00 0.00 0.00 4.46
713 786 3.642503 CCCGTACCCCCAGTTGCA 61.643 66.667 0.00 0.00 0.00 4.08
714 787 2.674754 CCGTACCCCCAGTTGCAT 59.325 61.111 0.00 0.00 0.00 3.96
715 788 1.001393 CCGTACCCCCAGTTGCATT 60.001 57.895 0.00 0.00 0.00 3.56
716 789 0.610785 CCGTACCCCCAGTTGCATTT 60.611 55.000 0.00 0.00 0.00 2.32
717 790 0.525761 CGTACCCCCAGTTGCATTTG 59.474 55.000 0.00 0.00 0.00 2.32
718 791 0.246360 GTACCCCCAGTTGCATTTGC 59.754 55.000 0.00 0.00 42.50 3.68
743 816 5.423886 TCCTCGCCTTTTCATTTTGTTTTT 58.576 33.333 0.00 0.00 0.00 1.94
785 858 2.736400 CGAATGGAATTTTGGGCTGCTC 60.736 50.000 0.00 0.00 36.07 4.26
867 944 0.471022 GGACCAAACCCACACCCATT 60.471 55.000 0.00 0.00 0.00 3.16
868 945 1.203075 GGACCAAACCCACACCCATTA 60.203 52.381 0.00 0.00 0.00 1.90
869 946 1.890489 GACCAAACCCACACCCATTAC 59.110 52.381 0.00 0.00 0.00 1.89
870 947 1.218196 ACCAAACCCACACCCATTACA 59.782 47.619 0.00 0.00 0.00 2.41
871 948 2.320781 CCAAACCCACACCCATTACAA 58.679 47.619 0.00 0.00 0.00 2.41
872 949 2.298729 CCAAACCCACACCCATTACAAG 59.701 50.000 0.00 0.00 0.00 3.16
873 950 2.298729 CAAACCCACACCCATTACAAGG 59.701 50.000 0.00 0.00 0.00 3.61
874 951 0.251608 ACCCACACCCATTACAAGGC 60.252 55.000 0.00 0.00 0.00 4.35
917 1008 2.252260 CCTCAAGCAACCAACGCG 59.748 61.111 3.53 3.53 0.00 6.01
950 1041 2.309504 CCCCTCCCTTCTTCCACCC 61.310 68.421 0.00 0.00 0.00 4.61
951 1042 1.541368 CCCTCCCTTCTTCCACCCA 60.541 63.158 0.00 0.00 0.00 4.51
952 1043 1.685820 CCTCCCTTCTTCCACCCAC 59.314 63.158 0.00 0.00 0.00 4.61
953 1044 1.685820 CTCCCTTCTTCCACCCACC 59.314 63.158 0.00 0.00 0.00 4.61
967 1058 2.797278 CCACCGATCCTTCCCTCCG 61.797 68.421 0.00 0.00 0.00 4.63
980 1071 2.762234 CCTCCGTTCCTCGTCCTCG 61.762 68.421 0.00 0.00 37.94 4.63
1028 1119 4.216411 TGGCTTACAAGATGGTAAGGAC 57.784 45.455 13.20 0.45 46.56 3.85
1042 1133 2.276740 GGACCCATCCAGGCCTTG 59.723 66.667 0.00 0.00 45.47 3.61
1061 1152 3.431725 CCACCGCCGCTTTCCTTC 61.432 66.667 0.00 0.00 0.00 3.46
1065 1156 3.041940 CGCCGCTTTCCTTCACGT 61.042 61.111 0.00 0.00 0.00 4.49
1074 1165 0.761323 TTCCTTCACGTGTCTGGGGA 60.761 55.000 16.51 13.26 0.00 4.81
1075 1166 1.185618 TCCTTCACGTGTCTGGGGAG 61.186 60.000 16.51 3.70 0.00 4.30
1076 1167 1.185618 CCTTCACGTGTCTGGGGAGA 61.186 60.000 16.51 0.00 0.00 3.71
1077 1168 0.679505 CTTCACGTGTCTGGGGAGAA 59.320 55.000 16.51 0.00 0.00 2.87
1079 1170 1.348064 TCACGTGTCTGGGGAGAAAT 58.652 50.000 16.51 0.00 0.00 2.17
1080 1171 1.697432 TCACGTGTCTGGGGAGAAATT 59.303 47.619 16.51 0.00 0.00 1.82
1081 1172 2.105821 TCACGTGTCTGGGGAGAAATTT 59.894 45.455 16.51 0.00 0.00 1.82
1082 1173 2.226437 CACGTGTCTGGGGAGAAATTTG 59.774 50.000 7.58 0.00 0.00 2.32
1084 1175 3.146066 CGTGTCTGGGGAGAAATTTGAA 58.854 45.455 0.00 0.00 0.00 2.69
1085 1176 3.568007 CGTGTCTGGGGAGAAATTTGAAA 59.432 43.478 0.00 0.00 0.00 2.69
1086 1177 4.556699 CGTGTCTGGGGAGAAATTTGAAAC 60.557 45.833 0.00 0.00 0.00 2.78
1087 1178 3.568007 TGTCTGGGGAGAAATTTGAAACG 59.432 43.478 0.00 0.00 0.00 3.60
1088 1179 3.818773 GTCTGGGGAGAAATTTGAAACGA 59.181 43.478 0.00 0.00 0.00 3.85
1090 1181 2.888414 TGGGGAGAAATTTGAAACGACC 59.112 45.455 0.00 0.00 0.00 4.79
1098 1212 0.589223 TTTGAAACGACCGATGGTGC 59.411 50.000 0.00 0.00 35.25 5.01
1371 1485 5.991328 TCTTCTTCATCGCATGGTAATTC 57.009 39.130 0.00 0.00 0.00 2.17
1375 1489 4.507756 TCTTCATCGCATGGTAATTCTTCG 59.492 41.667 0.00 0.00 0.00 3.79
1377 1491 1.295792 TCGCATGGTAATTCTTCGCC 58.704 50.000 0.00 0.00 0.00 5.54
1378 1492 1.134521 TCGCATGGTAATTCTTCGCCT 60.135 47.619 0.00 0.00 0.00 5.52
1379 1493 1.003545 CGCATGGTAATTCTTCGCCTG 60.004 52.381 0.00 0.00 0.00 4.85
1380 1494 1.334869 GCATGGTAATTCTTCGCCTGG 59.665 52.381 0.00 0.00 0.00 4.45
1381 1495 2.917933 CATGGTAATTCTTCGCCTGGA 58.082 47.619 0.00 0.00 0.00 3.86
1382 1496 3.480470 CATGGTAATTCTTCGCCTGGAT 58.520 45.455 0.00 0.00 0.00 3.41
1383 1497 3.194005 TGGTAATTCTTCGCCTGGATC 57.806 47.619 0.00 0.00 0.00 3.36
1384 1498 2.158813 TGGTAATTCTTCGCCTGGATCC 60.159 50.000 4.20 4.20 0.00 3.36
1385 1499 2.495084 GTAATTCTTCGCCTGGATCCC 58.505 52.381 9.90 0.00 0.00 3.85
1386 1500 1.216990 AATTCTTCGCCTGGATCCCT 58.783 50.000 9.90 0.00 0.00 4.20
1387 1501 0.761802 ATTCTTCGCCTGGATCCCTC 59.238 55.000 9.90 0.00 0.00 4.30
1388 1502 1.338136 TTCTTCGCCTGGATCCCTCC 61.338 60.000 9.90 0.00 42.45 4.30
1389 1503 2.768344 TTCGCCTGGATCCCTCCC 60.768 66.667 9.90 0.00 41.29 4.30
1390 1504 3.332393 TTCGCCTGGATCCCTCCCT 62.332 63.158 9.90 0.00 41.29 4.20
1391 1505 2.770048 CGCCTGGATCCCTCCCTT 60.770 66.667 9.90 0.00 41.29 3.95
1392 1506 1.459539 CGCCTGGATCCCTCCCTTA 60.460 63.158 9.90 0.00 41.29 2.69
1393 1507 1.054406 CGCCTGGATCCCTCCCTTAA 61.054 60.000 9.90 0.00 41.29 1.85
1394 1508 1.450360 GCCTGGATCCCTCCCTTAAT 58.550 55.000 9.90 0.00 41.29 1.40
1395 1509 1.783365 GCCTGGATCCCTCCCTTAATT 59.217 52.381 9.90 0.00 41.29 1.40
1396 1510 2.224892 GCCTGGATCCCTCCCTTAATTC 60.225 54.545 9.90 0.00 41.29 2.17
1397 1511 2.376855 CCTGGATCCCTCCCTTAATTCC 59.623 54.545 9.90 0.00 41.29 3.01
1398 1512 3.056080 CTGGATCCCTCCCTTAATTCCA 58.944 50.000 9.90 0.00 41.29 3.53
1399 1513 2.783510 TGGATCCCTCCCTTAATTCCAC 59.216 50.000 9.90 0.00 41.29 4.02
1400 1514 3.056832 GGATCCCTCCCTTAATTCCACT 58.943 50.000 0.00 0.00 35.28 4.00
1401 1515 3.073209 GGATCCCTCCCTTAATTCCACTC 59.927 52.174 0.00 0.00 35.28 3.51
1402 1516 3.214694 TCCCTCCCTTAATTCCACTCA 57.785 47.619 0.00 0.00 0.00 3.41
1403 1517 2.844348 TCCCTCCCTTAATTCCACTCAC 59.156 50.000 0.00 0.00 0.00 3.51
1404 1518 2.846827 CCCTCCCTTAATTCCACTCACT 59.153 50.000 0.00 0.00 0.00 3.41
1405 1519 3.118223 CCCTCCCTTAATTCCACTCACTC 60.118 52.174 0.00 0.00 0.00 3.51
1406 1520 3.118223 CCTCCCTTAATTCCACTCACTCC 60.118 52.174 0.00 0.00 0.00 3.85
1407 1521 2.844348 TCCCTTAATTCCACTCACTCCC 59.156 50.000 0.00 0.00 0.00 4.30
1408 1522 2.846827 CCCTTAATTCCACTCACTCCCT 59.153 50.000 0.00 0.00 0.00 4.20
1409 1523 3.267031 CCCTTAATTCCACTCACTCCCTT 59.733 47.826 0.00 0.00 0.00 3.95
1410 1524 4.518249 CCTTAATTCCACTCACTCCCTTC 58.482 47.826 0.00 0.00 0.00 3.46
1420 1534 3.243907 ACTCACTCCCTTCTTCTCGTTTG 60.244 47.826 0.00 0.00 0.00 2.93
1421 1535 2.698797 TCACTCCCTTCTTCTCGTTTGT 59.301 45.455 0.00 0.00 0.00 2.83
1423 1537 3.495001 CACTCCCTTCTTCTCGTTTGTTC 59.505 47.826 0.00 0.00 0.00 3.18
1426 1540 2.548480 CCCTTCTTCTCGTTTGTTCACC 59.452 50.000 0.00 0.00 0.00 4.02
1427 1541 2.221055 CCTTCTTCTCGTTTGTTCACCG 59.779 50.000 0.00 0.00 0.00 4.94
1428 1542 1.214367 TCTTCTCGTTTGTTCACCGC 58.786 50.000 0.00 0.00 0.00 5.68
1429 1543 0.234884 CTTCTCGTTTGTTCACCGCC 59.765 55.000 0.00 0.00 0.00 6.13
1430 1544 1.492319 TTCTCGTTTGTTCACCGCCG 61.492 55.000 0.00 0.00 0.00 6.46
1431 1545 1.952133 CTCGTTTGTTCACCGCCGA 60.952 57.895 0.00 0.00 0.00 5.54
1432 1546 1.492319 CTCGTTTGTTCACCGCCGAA 61.492 55.000 0.00 0.00 0.00 4.30
1433 1547 0.881159 TCGTTTGTTCACCGCCGAAT 60.881 50.000 0.00 0.00 0.00 3.34
1434 1548 0.452122 CGTTTGTTCACCGCCGAATC 60.452 55.000 0.00 0.00 0.00 2.52
1435 1549 0.452122 GTTTGTTCACCGCCGAATCG 60.452 55.000 0.00 0.00 0.00 3.34
1437 1551 1.011968 TTGTTCACCGCCGAATCGAG 61.012 55.000 3.36 0.00 0.00 4.04
1438 1552 1.445582 GTTCACCGCCGAATCGAGT 60.446 57.895 3.36 0.00 0.00 4.18
1439 1553 0.179156 GTTCACCGCCGAATCGAGTA 60.179 55.000 3.36 0.00 0.00 2.59
1451 1570 3.362986 CGAATCGAGTAAAATCATGGCGG 60.363 47.826 0.00 0.00 0.00 6.13
1459 1578 1.602311 AAATCATGGCGGCTGATCTC 58.398 50.000 19.02 0.00 32.22 2.75
1461 1580 2.446142 ATCATGGCGGCTGATCTCGG 62.446 60.000 11.43 0.00 0.00 4.63
1473 1592 5.073311 GCTGATCTCGGTTATTAGCCATA 57.927 43.478 0.00 0.00 31.61 2.74
1474 1593 4.865365 GCTGATCTCGGTTATTAGCCATAC 59.135 45.833 0.00 0.00 31.61 2.39
1475 1594 5.336849 GCTGATCTCGGTTATTAGCCATACT 60.337 44.000 0.00 0.00 31.61 2.12
1476 1595 6.025749 TGATCTCGGTTATTAGCCATACTG 57.974 41.667 0.00 0.00 0.00 2.74
1477 1596 5.773176 TGATCTCGGTTATTAGCCATACTGA 59.227 40.000 0.00 0.00 0.00 3.41
1478 1597 6.437477 TGATCTCGGTTATTAGCCATACTGAT 59.563 38.462 0.00 0.00 0.00 2.90
1479 1598 6.665992 TCTCGGTTATTAGCCATACTGATT 57.334 37.500 0.00 0.00 0.00 2.57
1480 1599 7.770366 TCTCGGTTATTAGCCATACTGATTA 57.230 36.000 0.00 0.00 0.00 1.75
1481 1600 7.600065 TCTCGGTTATTAGCCATACTGATTAC 58.400 38.462 0.00 0.00 0.00 1.89
1482 1601 6.384224 TCGGTTATTAGCCATACTGATTACG 58.616 40.000 0.00 0.00 27.71 3.18
1483 1602 6.207221 TCGGTTATTAGCCATACTGATTACGA 59.793 38.462 0.00 0.00 27.71 3.43
1484 1603 6.864685 CGGTTATTAGCCATACTGATTACGAA 59.135 38.462 0.00 0.00 27.71 3.85
1485 1604 7.544566 CGGTTATTAGCCATACTGATTACGAAT 59.455 37.037 0.00 0.00 27.71 3.34
1486 1605 9.216117 GGTTATTAGCCATACTGATTACGAATT 57.784 33.333 0.00 0.00 27.71 2.17
1605 1732 2.093783 GCTTTGATTGTCCGAACCGTAG 59.906 50.000 0.00 0.00 0.00 3.51
1625 1771 7.492614 CGTAGGTTTTACATCAATTTCTTGC 57.507 36.000 0.00 0.00 32.11 4.01
1630 1776 7.653311 AGGTTTTACATCAATTTCTTGCAAGAC 59.347 33.333 28.46 12.01 34.13 3.01
1655 1801 4.176271 GCAAGTCAAGCCATTCATAAACC 58.824 43.478 0.00 0.00 0.00 3.27
1722 1868 4.848562 TGGTCCTCTGCACTATATAACG 57.151 45.455 0.00 0.00 0.00 3.18
1758 1904 5.810587 AGTTGGTAGTAATTACATGACGCAG 59.189 40.000 17.65 0.00 33.73 5.18
1775 1921 3.930848 ACGCAGGTGCAAATTACTAGTAC 59.069 43.478 0.91 0.00 42.21 2.73
1804 1950 5.202746 TGACCATAGTCCTACCAACTACT 57.797 43.478 0.00 0.00 42.81 2.57
1805 1951 6.331577 TGACCATAGTCCTACCAACTACTA 57.668 41.667 0.00 0.00 42.81 1.82
1806 1952 6.125029 TGACCATAGTCCTACCAACTACTAC 58.875 44.000 0.00 0.00 42.81 2.73
1830 1976 4.713854 AACAAAATCGCAATCAAGCAAC 57.286 36.364 0.00 0.00 0.00 4.17
1866 2012 1.345741 CACTGAGACAGAAGCCCAGAA 59.654 52.381 5.76 0.00 35.18 3.02
1880 2026 9.525409 CAGAAGCCCAGAATTAAAATTAAGATG 57.475 33.333 0.00 0.00 0.00 2.90
1922 2068 2.586258 ATATGCTCACACCAGACGAC 57.414 50.000 0.00 0.00 0.00 4.34
1929 2075 0.677288 CACACCAGACGACCAAGGTA 59.323 55.000 0.00 0.00 32.01 3.08
1931 2077 0.389948 CACCAGACGACCAAGGTAGC 60.390 60.000 0.00 0.00 32.01 3.58
1933 2079 1.541310 CCAGACGACCAAGGTAGCCA 61.541 60.000 0.00 0.00 0.00 4.75
1984 2142 2.270205 CTCTGCAATCAGCCCCGT 59.730 61.111 0.00 0.00 44.83 5.28
2023 2185 2.096406 CGCCGAACACGCATCAAG 59.904 61.111 0.00 0.00 0.00 3.02
2043 2205 6.176183 TCAAGCTTTTTCCATTTTCCACAAA 58.824 32.000 0.00 0.00 0.00 2.83
2044 2206 6.315891 TCAAGCTTTTTCCATTTTCCACAAAG 59.684 34.615 0.00 0.00 0.00 2.77
2064 2226 1.173913 GTTGGTTGTCTGGCCCATAC 58.826 55.000 0.00 0.00 0.00 2.39
2065 2227 0.039035 TTGGTTGTCTGGCCCATACC 59.961 55.000 0.00 1.14 0.00 2.73
2152 2322 0.959553 CAGGGCCATCATCATGCTTC 59.040 55.000 6.18 0.00 0.00 3.86
2157 2327 2.957006 GGCCATCATCATGCTTCTCTTT 59.043 45.455 0.00 0.00 0.00 2.52
2203 2373 3.498397 CGGCATCTTTGTTACTGTTGTCT 59.502 43.478 0.00 0.00 0.00 3.41
2213 2383 9.530633 CTTTGTTACTGTTGTCTTTAGTACTCT 57.469 33.333 0.00 0.00 0.00 3.24
2216 2386 7.859377 TGTTACTGTTGTCTTTAGTACTCTTCG 59.141 37.037 0.00 0.00 0.00 3.79
2249 2419 2.467880 TCTCTTAACCCCCACAGCTAG 58.532 52.381 0.00 0.00 0.00 3.42
2394 2568 7.113704 AGTAACCTTTTACGATTGTCTTTCG 57.886 36.000 0.00 0.00 42.28 3.46
2410 2584 3.563808 TCTTTCGGTCAACATTTCACTGG 59.436 43.478 0.00 0.00 0.00 4.00
2411 2585 1.890876 TCGGTCAACATTTCACTGGG 58.109 50.000 0.00 0.00 0.00 4.45
2412 2586 1.418264 TCGGTCAACATTTCACTGGGA 59.582 47.619 0.00 0.00 0.00 4.37
2413 2587 1.806542 CGGTCAACATTTCACTGGGAG 59.193 52.381 0.00 0.00 0.00 4.30
2414 2588 1.541588 GGTCAACATTTCACTGGGAGC 59.458 52.381 0.00 0.00 0.00 4.70
2430 2604 1.327764 GGAGCGCTTAATCGAAAGTGG 59.672 52.381 13.26 0.68 37.44 4.00
2435 2609 2.084546 GCTTAATCGAAAGTGGGCAGT 58.915 47.619 0.00 0.00 0.00 4.40
2456 2630 5.123502 CAGTTTGATCAATCAGTTCCTCCTG 59.876 44.000 16.79 1.96 38.19 3.86
2457 2631 4.916041 TTGATCAATCAGTTCCTCCTGT 57.084 40.909 3.38 0.00 38.19 4.00
2458 2632 4.478206 TGATCAATCAGTTCCTCCTGTC 57.522 45.455 0.00 0.00 34.02 3.51
2459 2633 3.198635 TGATCAATCAGTTCCTCCTGTCC 59.801 47.826 0.00 0.00 34.02 4.02
2460 2634 2.907892 TCAATCAGTTCCTCCTGTCCT 58.092 47.619 0.00 0.00 34.02 3.85
2461 2635 2.834549 TCAATCAGTTCCTCCTGTCCTC 59.165 50.000 0.00 0.00 34.02 3.71
2462 2636 1.872773 ATCAGTTCCTCCTGTCCTCC 58.127 55.000 0.00 0.00 34.02 4.30
2463 2637 0.787084 TCAGTTCCTCCTGTCCTCCT 59.213 55.000 0.00 0.00 34.02 3.69
2464 2638 1.150135 TCAGTTCCTCCTGTCCTCCTT 59.850 52.381 0.00 0.00 34.02 3.36
2465 2639 1.277557 CAGTTCCTCCTGTCCTCCTTG 59.722 57.143 0.00 0.00 0.00 3.61
2528 2702 6.595772 CAGCAGAACTGGCTATTTAAGTAG 57.404 41.667 0.76 0.76 43.19 2.57
2671 2845 6.580041 ACACGAGTACATACAAAGTAGTTTCG 59.420 38.462 0.00 0.00 32.23 3.46
2698 2872 4.736611 ATTCAGTGGGATTAGGATGCAT 57.263 40.909 0.00 0.00 0.00 3.96
2699 2873 3.497103 TCAGTGGGATTAGGATGCATG 57.503 47.619 2.46 0.00 0.00 4.06
2702 2876 2.109480 AGTGGGATTAGGATGCATGCAT 59.891 45.455 32.66 32.66 39.69 3.96
2703 2877 2.230508 GTGGGATTAGGATGCATGCATG 59.769 50.000 36.73 22.70 36.70 4.06
2725 2915 4.332543 TGCATTACTCGATTGGTTGATGAC 59.667 41.667 0.00 0.00 0.00 3.06
2740 2936 5.156355 GTTGATGACGATGATTTGTTGCTT 58.844 37.500 0.00 0.00 0.00 3.91
2793 2989 1.971357 TCGAGGATAAGGGCCAAGATC 59.029 52.381 6.18 4.98 0.00 2.75
3011 3208 3.267233 TGATTGGGGCTGGCTGGT 61.267 61.111 0.00 0.00 0.00 4.00
3012 3209 2.037847 GATTGGGGCTGGCTGGTT 59.962 61.111 0.00 0.00 0.00 3.67
3013 3210 2.284112 ATTGGGGCTGGCTGGTTG 60.284 61.111 0.00 0.00 0.00 3.77
3014 3211 3.910784 ATTGGGGCTGGCTGGTTGG 62.911 63.158 0.00 0.00 0.00 3.77
3019 3216 3.994853 GCTGGCTGGTTGGTTGGC 61.995 66.667 0.00 0.00 0.00 4.52
3021 3218 2.203480 TGGCTGGTTGGTTGGCTC 60.203 61.111 0.00 0.00 0.00 4.70
3079 3276 1.202348 CGAGGGTTTGGGCTTTGATTC 59.798 52.381 0.00 0.00 0.00 2.52
3082 3279 1.970640 GGGTTTGGGCTTTGATTCAGT 59.029 47.619 0.00 0.00 0.00 3.41
3084 3281 3.193479 GGGTTTGGGCTTTGATTCAGTAG 59.807 47.826 0.00 0.00 0.00 2.57
3091 3288 7.391148 TGGGCTTTGATTCAGTAGAAATTAC 57.609 36.000 2.96 0.00 37.29 1.89
3138 3335 1.202371 ACGTGCGTGTGATGTATAGGG 60.202 52.381 0.00 0.00 0.00 3.53
3270 3472 3.130516 CCGCTCTTCAAGATGGTACTACA 59.869 47.826 0.00 0.00 0.00 2.74
3357 3566 0.040067 CGCCCAACTCAAAGCAGAAC 60.040 55.000 0.00 0.00 0.00 3.01
3373 3582 2.731976 CAGAACTTGTAAGGACACGAGC 59.268 50.000 0.00 0.00 34.48 5.03
3411 3620 8.103935 AGATTTTTGTAAGGAACTAGAAGGAGG 58.896 37.037 0.00 0.00 38.49 4.30
3412 3621 7.383156 TTTTTGTAAGGAACTAGAAGGAGGA 57.617 36.000 0.00 0.00 38.49 3.71
3416 3640 1.362932 AGGAACTAGAAGGAGGAGGCA 59.637 52.381 0.00 0.00 36.02 4.75
3423 3647 3.245668 AAGGAGGAGGCAGCGTGTG 62.246 63.158 0.00 0.00 0.00 3.82
3430 3654 0.380378 GAGGCAGCGTGTGTTTTTCA 59.620 50.000 0.00 0.00 0.00 2.69
3433 3657 0.503961 GCAGCGTGTGTTTTTCATGC 59.496 50.000 0.00 0.00 44.95 4.06
3435 3659 1.482531 GCGTGTGTTTTTCATGCGC 59.517 52.632 0.00 0.00 41.51 6.09
3436 3660 1.875419 GCGTGTGTTTTTCATGCGCC 61.875 55.000 4.18 0.00 41.91 6.53
3437 3661 0.317770 CGTGTGTTTTTCATGCGCCT 60.318 50.000 4.18 0.00 0.00 5.52
3438 3662 1.408422 GTGTGTTTTTCATGCGCCTC 58.592 50.000 4.18 0.00 0.00 4.70
3439 3663 0.040514 TGTGTTTTTCATGCGCCTCG 60.041 50.000 4.18 0.00 0.00 4.63
3468 3692 5.685599 GCCAAATCTAAAACATGGGCATCAT 60.686 40.000 0.00 0.00 39.88 2.45
3469 3693 6.462768 GCCAAATCTAAAACATGGGCATCATA 60.463 38.462 0.00 0.00 39.88 2.15
3472 3696 8.415553 CAAATCTAAAACATGGGCATCATAGAA 58.584 33.333 0.00 0.00 34.12 2.10
3483 3707 7.041635 TGGGCATCATAGAAACAACATAATG 57.958 36.000 0.00 0.00 0.00 1.90
3484 3708 6.606796 TGGGCATCATAGAAACAACATAATGT 59.393 34.615 0.00 0.00 34.24 2.71
3485 3709 7.777440 TGGGCATCATAGAAACAACATAATGTA 59.223 33.333 0.00 0.00 32.02 2.29
3486 3710 8.629158 GGGCATCATAGAAACAACATAATGTAA 58.371 33.333 0.00 0.00 32.02 2.41
3487 3711 9.450807 GGCATCATAGAAACAACATAATGTAAC 57.549 33.333 0.00 0.00 32.02 2.50
3492 3716 9.950680 CATAGAAACAACATAATGTAACATCCC 57.049 33.333 0.00 0.00 32.02 3.85
3493 3717 7.083875 AGAAACAACATAATGTAACATCCCG 57.916 36.000 0.00 0.00 32.02 5.14
3494 3718 6.882140 AGAAACAACATAATGTAACATCCCGA 59.118 34.615 0.00 0.00 32.02 5.14
3495 3719 7.556275 AGAAACAACATAATGTAACATCCCGAT 59.444 33.333 0.00 0.00 32.02 4.18
3496 3720 7.639113 AACAACATAATGTAACATCCCGATT 57.361 32.000 0.00 0.00 32.02 3.34
3497 3721 7.259290 ACAACATAATGTAACATCCCGATTC 57.741 36.000 0.00 0.00 0.00 2.52
3498 3722 7.054124 ACAACATAATGTAACATCCCGATTCT 58.946 34.615 0.00 0.00 0.00 2.40
3499 3723 7.226720 ACAACATAATGTAACATCCCGATTCTC 59.773 37.037 0.00 0.00 0.00 2.87
3500 3724 7.067496 ACATAATGTAACATCCCGATTCTCT 57.933 36.000 0.00 0.00 0.00 3.10
3501 3725 7.509546 ACATAATGTAACATCCCGATTCTCTT 58.490 34.615 0.00 0.00 0.00 2.85
3502 3726 7.993183 ACATAATGTAACATCCCGATTCTCTTT 59.007 33.333 0.00 0.00 0.00 2.52
3503 3727 8.840321 CATAATGTAACATCCCGATTCTCTTTT 58.160 33.333 0.00 0.00 0.00 2.27
3504 3728 7.703058 AATGTAACATCCCGATTCTCTTTTT 57.297 32.000 0.00 0.00 0.00 1.94
3505 3729 6.737254 TGTAACATCCCGATTCTCTTTTTC 57.263 37.500 0.00 0.00 0.00 2.29
3506 3730 5.646360 TGTAACATCCCGATTCTCTTTTTCC 59.354 40.000 0.00 0.00 0.00 3.13
3507 3731 4.301072 ACATCCCGATTCTCTTTTTCCA 57.699 40.909 0.00 0.00 0.00 3.53
3508 3732 4.662278 ACATCCCGATTCTCTTTTTCCAA 58.338 39.130 0.00 0.00 0.00 3.53
3509 3733 5.076873 ACATCCCGATTCTCTTTTTCCAAA 58.923 37.500 0.00 0.00 0.00 3.28
3510 3734 5.538433 ACATCCCGATTCTCTTTTTCCAAAA 59.462 36.000 0.00 0.00 0.00 2.44
3511 3735 6.041523 ACATCCCGATTCTCTTTTTCCAAAAA 59.958 34.615 0.00 0.00 36.53 1.94
3512 3736 6.664428 TCCCGATTCTCTTTTTCCAAAAAT 57.336 33.333 0.00 0.00 37.27 1.82
3513 3737 6.687604 TCCCGATTCTCTTTTTCCAAAAATC 58.312 36.000 0.00 0.00 37.27 2.17
3514 3738 6.266558 TCCCGATTCTCTTTTTCCAAAAATCA 59.733 34.615 0.00 0.00 37.27 2.57
3515 3739 6.928492 CCCGATTCTCTTTTTCCAAAAATCAA 59.072 34.615 0.00 0.00 37.27 2.57
3516 3740 7.116805 CCCGATTCTCTTTTTCCAAAAATCAAG 59.883 37.037 0.00 0.00 37.27 3.02
3517 3741 7.116805 CCGATTCTCTTTTTCCAAAAATCAAGG 59.883 37.037 0.00 0.00 37.27 3.61
3518 3742 7.359514 CGATTCTCTTTTTCCAAAAATCAAGGC 60.360 37.037 0.00 0.00 37.27 4.35
3519 3743 5.288804 TCTCTTTTTCCAAAAATCAAGGCG 58.711 37.500 0.00 0.00 37.27 5.52
3520 3744 5.068460 TCTCTTTTTCCAAAAATCAAGGCGA 59.932 36.000 0.00 0.00 37.27 5.54
3521 3745 5.288804 TCTTTTTCCAAAAATCAAGGCGAG 58.711 37.500 0.00 0.00 37.27 5.03
3522 3746 4.927978 TTTTCCAAAAATCAAGGCGAGA 57.072 36.364 0.00 0.00 0.00 4.04
3523 3747 4.927978 TTTCCAAAAATCAAGGCGAGAA 57.072 36.364 0.00 0.00 0.00 2.87
3524 3748 4.927978 TTCCAAAAATCAAGGCGAGAAA 57.072 36.364 0.00 0.00 0.00 2.52
3525 3749 4.927978 TCCAAAAATCAAGGCGAGAAAA 57.072 36.364 0.00 0.00 0.00 2.29
3526 3750 5.467035 TCCAAAAATCAAGGCGAGAAAAT 57.533 34.783 0.00 0.00 0.00 1.82
3527 3751 5.852827 TCCAAAAATCAAGGCGAGAAAATT 58.147 33.333 0.00 0.00 0.00 1.82
3528 3752 6.287525 TCCAAAAATCAAGGCGAGAAAATTT 58.712 32.000 0.00 0.00 0.00 1.82
3529 3753 6.423604 TCCAAAAATCAAGGCGAGAAAATTTC 59.576 34.615 0.00 0.00 0.00 2.17
3530 3754 6.202570 CCAAAAATCAAGGCGAGAAAATTTCA 59.797 34.615 8.55 0.00 0.00 2.69
3531 3755 7.095102 CCAAAAATCAAGGCGAGAAAATTTCAT 60.095 33.333 8.55 0.00 0.00 2.57
3532 3756 7.967890 AAAATCAAGGCGAGAAAATTTCATT 57.032 28.000 8.55 0.00 0.00 2.57
3533 3757 7.967890 AAATCAAGGCGAGAAAATTTCATTT 57.032 28.000 8.55 0.40 0.00 2.32
3534 3758 6.956299 ATCAAGGCGAGAAAATTTCATTTG 57.044 33.333 8.55 5.27 31.77 2.32
3535 3759 5.841810 TCAAGGCGAGAAAATTTCATTTGT 58.158 33.333 8.55 0.00 31.77 2.83
3536 3760 6.279882 TCAAGGCGAGAAAATTTCATTTGTT 58.720 32.000 8.55 0.00 31.77 2.83
3537 3761 6.760770 TCAAGGCGAGAAAATTTCATTTGTTT 59.239 30.769 8.55 0.00 31.77 2.83
3538 3762 7.279758 TCAAGGCGAGAAAATTTCATTTGTTTT 59.720 29.630 8.55 0.00 31.77 2.43
3539 3763 7.552458 AGGCGAGAAAATTTCATTTGTTTTT 57.448 28.000 8.55 0.00 31.77 1.94
3599 3823 9.990868 AGGATTTAATTTGACTAATACCAACCT 57.009 29.630 0.00 0.00 0.00 3.50
3617 3841 8.972458 ACCAACCTAAATTAAAATTGCAGTTT 57.028 26.923 0.65 0.65 0.00 2.66
3618 3842 9.402320 ACCAACCTAAATTAAAATTGCAGTTTT 57.598 25.926 21.55 21.55 35.60 2.43
3619 3843 9.662545 CCAACCTAAATTAAAATTGCAGTTTTG 57.337 29.630 25.13 12.03 33.62 2.44
3628 3852 9.822185 ATTAAAATTGCAGTTTTGTTCTTCTCT 57.178 25.926 25.13 2.48 33.62 3.10
3629 3853 9.651913 TTAAAATTGCAGTTTTGTTCTTCTCTT 57.348 25.926 25.13 2.02 33.62 2.85
3630 3854 7.529880 AAATTGCAGTTTTGTTCTTCTCTTG 57.470 32.000 0.65 0.00 0.00 3.02
3631 3855 5.643379 TTGCAGTTTTGTTCTTCTCTTGT 57.357 34.783 0.00 0.00 0.00 3.16
3632 3856 4.985413 TGCAGTTTTGTTCTTCTCTTGTG 58.015 39.130 0.00 0.00 0.00 3.33
3633 3857 4.142403 TGCAGTTTTGTTCTTCTCTTGTGG 60.142 41.667 0.00 0.00 0.00 4.17
3634 3858 4.142381 GCAGTTTTGTTCTTCTCTTGTGGT 60.142 41.667 0.00 0.00 0.00 4.16
3635 3859 5.622233 GCAGTTTTGTTCTTCTCTTGTGGTT 60.622 40.000 0.00 0.00 0.00 3.67
3636 3860 5.801947 CAGTTTTGTTCTTCTCTTGTGGTTG 59.198 40.000 0.00 0.00 0.00 3.77
3637 3861 4.981806 TTTGTTCTTCTCTTGTGGTTGG 57.018 40.909 0.00 0.00 0.00 3.77
3638 3862 2.930950 TGTTCTTCTCTTGTGGTTGGG 58.069 47.619 0.00 0.00 0.00 4.12
3639 3863 2.241176 TGTTCTTCTCTTGTGGTTGGGT 59.759 45.455 0.00 0.00 0.00 4.51
3640 3864 3.288092 GTTCTTCTCTTGTGGTTGGGTT 58.712 45.455 0.00 0.00 0.00 4.11
3641 3865 3.662759 TCTTCTCTTGTGGTTGGGTTT 57.337 42.857 0.00 0.00 0.00 3.27
3642 3866 4.781775 TCTTCTCTTGTGGTTGGGTTTA 57.218 40.909 0.00 0.00 0.00 2.01
3643 3867 5.319043 TCTTCTCTTGTGGTTGGGTTTAT 57.681 39.130 0.00 0.00 0.00 1.40
3644 3868 5.701224 TCTTCTCTTGTGGTTGGGTTTATT 58.299 37.500 0.00 0.00 0.00 1.40
3645 3869 6.133356 TCTTCTCTTGTGGTTGGGTTTATTT 58.867 36.000 0.00 0.00 0.00 1.40
3646 3870 6.609616 TCTTCTCTTGTGGTTGGGTTTATTTT 59.390 34.615 0.00 0.00 0.00 1.82
3647 3871 7.780745 TCTTCTCTTGTGGTTGGGTTTATTTTA 59.219 33.333 0.00 0.00 0.00 1.52
3648 3872 8.485578 TTCTCTTGTGGTTGGGTTTATTTTAT 57.514 30.769 0.00 0.00 0.00 1.40
3649 3873 8.485578 TCTCTTGTGGTTGGGTTTATTTTATT 57.514 30.769 0.00 0.00 0.00 1.40
3650 3874 8.364142 TCTCTTGTGGTTGGGTTTATTTTATTG 58.636 33.333 0.00 0.00 0.00 1.90
3651 3875 6.931840 TCTTGTGGTTGGGTTTATTTTATTGC 59.068 34.615 0.00 0.00 0.00 3.56
3652 3876 5.552178 TGTGGTTGGGTTTATTTTATTGCC 58.448 37.500 0.00 0.00 0.00 4.52
3653 3877 5.308237 TGTGGTTGGGTTTATTTTATTGCCT 59.692 36.000 0.00 0.00 0.00 4.75
3654 3878 5.872617 GTGGTTGGGTTTATTTTATTGCCTC 59.127 40.000 0.00 0.00 0.00 4.70
3655 3879 5.782845 TGGTTGGGTTTATTTTATTGCCTCT 59.217 36.000 0.00 0.00 0.00 3.69
3656 3880 6.106003 GGTTGGGTTTATTTTATTGCCTCTG 58.894 40.000 0.00 0.00 0.00 3.35
3657 3881 5.930837 TGGGTTTATTTTATTGCCTCTGG 57.069 39.130 0.00 0.00 0.00 3.86
3707 3931 7.707774 TTTTAAAGTTGTTTGCTATTGCTCC 57.292 32.000 0.00 0.00 40.48 4.70
3708 3932 4.935352 AAAGTTGTTTGCTATTGCTCCA 57.065 36.364 0.00 0.00 40.48 3.86
3709 3933 4.935352 AAGTTGTTTGCTATTGCTCCAA 57.065 36.364 0.00 0.00 40.48 3.53
3710 3934 4.243007 AGTTGTTTGCTATTGCTCCAAC 57.757 40.909 15.43 15.43 39.53 3.77
3711 3935 3.891366 AGTTGTTTGCTATTGCTCCAACT 59.109 39.130 18.08 18.08 41.86 3.16
3712 3936 4.342092 AGTTGTTTGCTATTGCTCCAACTT 59.658 37.500 18.08 8.89 42.87 2.66
3713 3937 4.935352 TGTTTGCTATTGCTCCAACTTT 57.065 36.364 0.00 0.00 40.48 2.66
3714 3938 6.040391 AGTTGTTTGCTATTGCTCCAACTTTA 59.960 34.615 18.08 2.91 42.87 1.85
3715 3939 6.398234 TGTTTGCTATTGCTCCAACTTTAA 57.602 33.333 0.00 0.00 40.48 1.52
3716 3940 6.991938 TGTTTGCTATTGCTCCAACTTTAAT 58.008 32.000 0.00 0.00 40.48 1.40
3717 3941 7.090173 TGTTTGCTATTGCTCCAACTTTAATC 58.910 34.615 0.00 0.00 40.48 1.75
3718 3942 5.835113 TGCTATTGCTCCAACTTTAATCC 57.165 39.130 0.00 0.00 40.48 3.01
3719 3943 4.644685 TGCTATTGCTCCAACTTTAATCCC 59.355 41.667 0.00 0.00 40.48 3.85
3720 3944 4.889995 GCTATTGCTCCAACTTTAATCCCT 59.110 41.667 0.00 0.00 36.03 4.20
3721 3945 5.360999 GCTATTGCTCCAACTTTAATCCCTT 59.639 40.000 0.00 0.00 36.03 3.95
3722 3946 6.127338 GCTATTGCTCCAACTTTAATCCCTTT 60.127 38.462 0.00 0.00 36.03 3.11
3723 3947 5.722021 TTGCTCCAACTTTAATCCCTTTC 57.278 39.130 0.00 0.00 0.00 2.62
3724 3948 4.998051 TGCTCCAACTTTAATCCCTTTCT 58.002 39.130 0.00 0.00 0.00 2.52
3725 3949 6.134535 TGCTCCAACTTTAATCCCTTTCTA 57.865 37.500 0.00 0.00 0.00 2.10
3726 3950 6.180472 TGCTCCAACTTTAATCCCTTTCTAG 58.820 40.000 0.00 0.00 0.00 2.43
3727 3951 6.012858 TGCTCCAACTTTAATCCCTTTCTAGA 60.013 38.462 0.00 0.00 0.00 2.43
3728 3952 7.057264 GCTCCAACTTTAATCCCTTTCTAGAT 58.943 38.462 0.00 0.00 0.00 1.98
3729 3953 7.558081 GCTCCAACTTTAATCCCTTTCTAGATT 59.442 37.037 0.00 0.00 36.67 2.40
3730 3954 9.467796 CTCCAACTTTAATCCCTTTCTAGATTT 57.532 33.333 0.00 0.00 34.60 2.17
3731 3955 9.822727 TCCAACTTTAATCCCTTTCTAGATTTT 57.177 29.630 0.00 0.00 34.60 1.82
3787 4011 7.130681 ACTTATTCTCTCTATCAAACCCTGG 57.869 40.000 0.00 0.00 0.00 4.45
3788 4012 3.914426 TTCTCTCTATCAAACCCTGGC 57.086 47.619 0.00 0.00 0.00 4.85
3789 4013 2.119495 TCTCTCTATCAAACCCTGGCC 58.881 52.381 0.00 0.00 0.00 5.36
3790 4014 1.839994 CTCTCTATCAAACCCTGGCCA 59.160 52.381 4.71 4.71 0.00 5.36
3791 4015 2.441001 CTCTCTATCAAACCCTGGCCAT 59.559 50.000 5.51 0.00 0.00 4.40
3792 4016 3.648067 CTCTCTATCAAACCCTGGCCATA 59.352 47.826 5.51 0.00 0.00 2.74
3793 4017 4.044308 TCTCTATCAAACCCTGGCCATAA 58.956 43.478 5.51 0.00 0.00 1.90
3794 4018 4.665009 TCTCTATCAAACCCTGGCCATAAT 59.335 41.667 5.51 0.00 0.00 1.28
3795 4019 5.134339 TCTCTATCAAACCCTGGCCATAATT 59.866 40.000 5.51 0.00 0.00 1.40
3796 4020 5.776358 TCTATCAAACCCTGGCCATAATTT 58.224 37.500 5.51 3.96 0.00 1.82
3797 4021 6.201591 TCTATCAAACCCTGGCCATAATTTT 58.798 36.000 5.51 0.43 0.00 1.82
3798 4022 4.817318 TCAAACCCTGGCCATAATTTTC 57.183 40.909 5.51 0.00 0.00 2.29
3799 4023 3.517500 TCAAACCCTGGCCATAATTTTCC 59.482 43.478 5.51 0.00 0.00 3.13
3800 4024 2.938428 ACCCTGGCCATAATTTTCCA 57.062 45.000 5.51 0.00 0.00 3.53
3801 4025 3.197927 ACCCTGGCCATAATTTTCCAA 57.802 42.857 5.51 0.00 0.00 3.53
3802 4026 3.106827 ACCCTGGCCATAATTTTCCAAG 58.893 45.455 5.51 0.00 0.00 3.61
3803 4027 2.435437 CCCTGGCCATAATTTTCCAAGG 59.565 50.000 5.51 0.00 0.00 3.61
3804 4028 3.106827 CCTGGCCATAATTTTCCAAGGT 58.893 45.455 5.51 0.00 0.00 3.50
3805 4029 4.285863 CCTGGCCATAATTTTCCAAGGTA 58.714 43.478 5.51 0.00 0.00 3.08
3806 4030 4.099419 CCTGGCCATAATTTTCCAAGGTAC 59.901 45.833 5.51 0.00 0.00 3.34
3807 4031 4.678256 TGGCCATAATTTTCCAAGGTACA 58.322 39.130 0.00 0.00 0.00 2.90
3808 4032 5.087323 TGGCCATAATTTTCCAAGGTACAA 58.913 37.500 0.00 0.00 0.00 2.41
3809 4033 5.723887 TGGCCATAATTTTCCAAGGTACAAT 59.276 36.000 0.00 0.00 0.00 2.71
3810 4034 6.127196 TGGCCATAATTTTCCAAGGTACAATC 60.127 38.462 0.00 0.00 0.00 2.67
3811 4035 6.098266 GGCCATAATTTTCCAAGGTACAATCT 59.902 38.462 0.00 0.00 0.00 2.40
3812 4036 6.980397 GCCATAATTTTCCAAGGTACAATCTG 59.020 38.462 0.00 0.00 0.00 2.90
3813 4037 7.147915 GCCATAATTTTCCAAGGTACAATCTGA 60.148 37.037 0.00 0.00 0.00 3.27
3814 4038 8.917088 CCATAATTTTCCAAGGTACAATCTGAT 58.083 33.333 0.00 0.00 0.00 2.90
3818 4042 8.655935 ATTTTCCAAGGTACAATCTGATTTCT 57.344 30.769 0.00 0.00 0.00 2.52
3819 4043 8.477419 TTTTCCAAGGTACAATCTGATTTCTT 57.523 30.769 0.00 0.63 0.00 2.52
3820 4044 8.477419 TTTCCAAGGTACAATCTGATTTCTTT 57.523 30.769 0.00 0.00 0.00 2.52
3821 4045 7.687941 TCCAAGGTACAATCTGATTTCTTTC 57.312 36.000 0.00 0.00 0.00 2.62
3822 4046 7.461749 TCCAAGGTACAATCTGATTTCTTTCT 58.538 34.615 0.00 0.00 0.00 2.52
3823 4047 7.944554 TCCAAGGTACAATCTGATTTCTTTCTT 59.055 33.333 0.00 0.00 0.00 2.52
3824 4048 8.579863 CCAAGGTACAATCTGATTTCTTTCTTT 58.420 33.333 0.00 0.00 0.00 2.52
3825 4049 9.971922 CAAGGTACAATCTGATTTCTTTCTTTT 57.028 29.630 0.00 0.00 0.00 2.27
3827 4051 9.579932 AGGTACAATCTGATTTCTTTCTTTTCT 57.420 29.630 0.00 0.00 0.00 2.52
3828 4052 9.833182 GGTACAATCTGATTTCTTTCTTTTCTC 57.167 33.333 0.00 0.00 0.00 2.87
3840 4064 7.914537 TCTTTCTTTTCTCATTTTCTTTCGC 57.085 32.000 0.00 0.00 0.00 4.70
3841 4065 6.918022 TCTTTCTTTTCTCATTTTCTTTCGCC 59.082 34.615 0.00 0.00 0.00 5.54
3842 4066 5.121221 TCTTTTCTCATTTTCTTTCGCCC 57.879 39.130 0.00 0.00 0.00 6.13
3843 4067 3.552604 TTTCTCATTTTCTTTCGCCCG 57.447 42.857 0.00 0.00 0.00 6.13
3844 4068 2.465860 TCTCATTTTCTTTCGCCCGA 57.534 45.000 0.00 0.00 0.00 5.14
3845 4069 2.985896 TCTCATTTTCTTTCGCCCGAT 58.014 42.857 0.00 0.00 0.00 4.18
3846 4070 3.343617 TCTCATTTTCTTTCGCCCGATT 58.656 40.909 0.00 0.00 0.00 3.34
3847 4071 3.126858 TCTCATTTTCTTTCGCCCGATTG 59.873 43.478 0.00 0.00 0.00 2.67
3848 4072 2.163412 TCATTTTCTTTCGCCCGATTGG 59.837 45.455 0.00 0.00 37.09 3.16
3869 4093 4.898829 GGCCATGCCCATTTTTATTTTC 57.101 40.909 0.00 0.00 44.06 2.29
3870 4094 4.525996 GGCCATGCCCATTTTTATTTTCT 58.474 39.130 0.00 0.00 44.06 2.52
3871 4095 4.949238 GGCCATGCCCATTTTTATTTTCTT 59.051 37.500 0.00 0.00 44.06 2.52
3872 4096 5.163632 GGCCATGCCCATTTTTATTTTCTTG 60.164 40.000 0.00 0.00 44.06 3.02
3873 4097 5.676837 GCCATGCCCATTTTTATTTTCTTGC 60.677 40.000 0.00 0.00 0.00 4.01
3874 4098 5.648960 CCATGCCCATTTTTATTTTCTTGCT 59.351 36.000 0.00 0.00 0.00 3.91
3875 4099 6.822676 CCATGCCCATTTTTATTTTCTTGCTA 59.177 34.615 0.00 0.00 0.00 3.49
3876 4100 7.336427 CCATGCCCATTTTTATTTTCTTGCTAA 59.664 33.333 0.00 0.00 0.00 3.09
3877 4101 7.665561 TGCCCATTTTTATTTTCTTGCTAAC 57.334 32.000 0.00 0.00 0.00 2.34
3878 4102 7.449247 TGCCCATTTTTATTTTCTTGCTAACT 58.551 30.769 0.00 0.00 0.00 2.24
3879 4103 8.589338 TGCCCATTTTTATTTTCTTGCTAACTA 58.411 29.630 0.00 0.00 0.00 2.24
3880 4104 9.599866 GCCCATTTTTATTTTCTTGCTAACTAT 57.400 29.630 0.00 0.00 0.00 2.12
3886 4110 9.921637 TTTTATTTTCTTGCTAACTATGTTGGG 57.078 29.630 0.00 0.00 0.00 4.12
3887 4111 5.385509 TTTTCTTGCTAACTATGTTGGGC 57.614 39.130 0.00 0.00 0.00 5.36
3888 4112 4.301072 TTCTTGCTAACTATGTTGGGCT 57.699 40.909 0.00 0.00 0.00 5.19
3889 4113 3.609853 TCTTGCTAACTATGTTGGGCTG 58.390 45.455 0.00 0.00 0.00 4.85
3890 4114 3.009033 TCTTGCTAACTATGTTGGGCTGT 59.991 43.478 0.00 0.00 0.00 4.40
3891 4115 2.710377 TGCTAACTATGTTGGGCTGTG 58.290 47.619 0.00 0.00 0.00 3.66
3892 4116 2.017049 GCTAACTATGTTGGGCTGTGG 58.983 52.381 0.00 0.00 0.00 4.17
3893 4117 2.017049 CTAACTATGTTGGGCTGTGGC 58.983 52.381 0.00 0.00 37.82 5.01
3894 4118 0.112218 AACTATGTTGGGCTGTGGCA 59.888 50.000 0.00 0.00 40.87 4.92
3895 4119 0.112218 ACTATGTTGGGCTGTGGCAA 59.888 50.000 0.00 0.00 40.87 4.52
3896 4120 0.527565 CTATGTTGGGCTGTGGCAAC 59.472 55.000 0.00 0.00 40.87 4.17
3897 4121 0.897863 TATGTTGGGCTGTGGCAACC 60.898 55.000 0.00 0.00 40.87 3.77
3898 4122 3.615709 GTTGGGCTGTGGCAACCC 61.616 66.667 13.25 13.25 39.99 4.11
3899 4123 4.149019 TTGGGCTGTGGCAACCCA 62.149 61.111 17.68 17.68 46.61 4.51
3900 4124 3.913445 TGGGCTGTGGCAACCCAT 61.913 61.111 17.68 0.00 43.87 4.00
3901 4125 3.070576 GGGCTGTGGCAACCCATC 61.071 66.667 14.83 0.00 44.51 3.51
3902 4126 3.070576 GGCTGTGGCAACCCATCC 61.071 66.667 0.00 0.00 44.51 3.51
3903 4127 3.070576 GCTGTGGCAACCCATCCC 61.071 66.667 0.00 0.00 44.51 3.85
3904 4128 2.765969 CTGTGGCAACCCATCCCT 59.234 61.111 0.00 0.00 44.51 4.20
3905 4129 1.379044 CTGTGGCAACCCATCCCTC 60.379 63.158 0.00 0.00 44.51 4.30
3906 4130 1.852157 TGTGGCAACCCATCCCTCT 60.852 57.895 0.00 0.00 44.51 3.69
3907 4131 0.548926 TGTGGCAACCCATCCCTCTA 60.549 55.000 0.00 0.00 44.51 2.43
3908 4132 0.107165 GTGGCAACCCATCCCTCTAC 60.107 60.000 0.00 0.00 44.51 2.59
3909 4133 1.279025 TGGCAACCCATCCCTCTACC 61.279 60.000 0.00 0.00 35.79 3.18
3910 4134 0.988678 GGCAACCCATCCCTCTACCT 60.989 60.000 0.00 0.00 0.00 3.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 2.282391 ATTTGCTGGTGCGCAGGA 60.282 55.556 12.22 0.00 41.55 3.86
34 35 2.733593 GTGCGTCGGTGACCTCAC 60.734 66.667 0.00 0.00 45.72 3.51
83 84 4.200283 GCGGCACTCCTCTCCTCG 62.200 72.222 0.00 0.00 0.00 4.63
95 96 2.731691 AAGAAGAGAAAGCGGCGGCA 62.732 55.000 19.21 0.00 43.41 5.69
99 114 2.159774 CGAGAAAAGAAGAGAAAGCGGC 60.160 50.000 0.00 0.00 0.00 6.53
140 155 2.155279 GGGCAAAGGTGAAAGAGTCTC 58.845 52.381 0.00 0.00 0.00 3.36
141 156 1.202940 GGGGCAAAGGTGAAAGAGTCT 60.203 52.381 0.00 0.00 0.00 3.24
144 159 0.113190 AGGGGGCAAAGGTGAAAGAG 59.887 55.000 0.00 0.00 0.00 2.85
146 161 0.969149 GAAGGGGGCAAAGGTGAAAG 59.031 55.000 0.00 0.00 0.00 2.62
150 168 0.113190 AGAAGAAGGGGGCAAAGGTG 59.887 55.000 0.00 0.00 0.00 4.00
159 177 2.291217 CCAAGGGAAGAAGAAGAAGGGG 60.291 54.545 0.00 0.00 0.00 4.79
209 246 2.049475 ATCTACGCAGGCTCGTCGTC 62.049 60.000 13.73 0.00 43.15 4.20
210 247 2.113433 ATCTACGCAGGCTCGTCGT 61.113 57.895 13.73 11.91 43.15 4.34
211 248 1.655654 CATCTACGCAGGCTCGTCG 60.656 63.158 13.73 9.20 43.15 5.12
289 327 1.091771 ATCCTGCACCAAGATTCGCG 61.092 55.000 0.00 0.00 0.00 5.87
372 417 1.518133 GAGGAGCAGTAGCACGCAG 60.518 63.158 0.00 0.00 45.49 5.18
414 459 8.783093 ACATAATCACATTCACCCGTTAATATG 58.217 33.333 0.00 0.00 0.00 1.78
433 478 2.286833 TGAGCGCGCCTTTTACATAATC 59.713 45.455 30.33 14.58 0.00 1.75
434 479 2.285083 TGAGCGCGCCTTTTACATAAT 58.715 42.857 30.33 3.57 0.00 1.28
435 480 1.728068 TGAGCGCGCCTTTTACATAA 58.272 45.000 30.33 0.00 0.00 1.90
436 481 1.948104 ATGAGCGCGCCTTTTACATA 58.052 45.000 30.33 3.80 0.00 2.29
437 482 1.094785 AATGAGCGCGCCTTTTACAT 58.905 45.000 30.33 19.38 0.00 2.29
438 483 0.167908 CAATGAGCGCGCCTTTTACA 59.832 50.000 30.33 18.01 0.00 2.41
439 484 0.523335 CCAATGAGCGCGCCTTTTAC 60.523 55.000 30.33 12.82 0.00 2.01
440 485 0.675208 TCCAATGAGCGCGCCTTTTA 60.675 50.000 30.33 6.62 0.00 1.52
450 495 4.380531 TCATCGGTTCTTATCCAATGAGC 58.619 43.478 0.00 0.00 0.00 4.26
453 498 7.170828 TCGTTAATCATCGGTTCTTATCCAATG 59.829 37.037 0.00 0.00 0.00 2.82
455 500 6.477688 GTCGTTAATCATCGGTTCTTATCCAA 59.522 38.462 0.00 0.00 0.00 3.53
462 507 3.432782 GTCGTCGTTAATCATCGGTTCT 58.567 45.455 0.00 0.00 0.00 3.01
463 508 2.212687 CGTCGTCGTTAATCATCGGTTC 59.787 50.000 0.00 0.00 0.00 3.62
467 512 1.511552 CACCGTCGTCGTTAATCATCG 59.488 52.381 0.71 0.00 35.01 3.84
503 554 4.826274 TCCCTTCAAGATAACAGTCTGG 57.174 45.455 4.53 0.00 0.00 3.86
694 767 4.770874 CAACTGGGGGTACGGGCG 62.771 72.222 0.00 0.00 0.00 6.13
713 786 2.170166 TGAAAAGGCGAGGATGCAAAT 58.830 42.857 0.00 0.00 36.28 2.32
714 787 1.614996 TGAAAAGGCGAGGATGCAAA 58.385 45.000 0.00 0.00 36.28 3.68
715 788 1.838112 ATGAAAAGGCGAGGATGCAA 58.162 45.000 0.00 0.00 36.28 4.08
716 789 1.838112 AATGAAAAGGCGAGGATGCA 58.162 45.000 0.00 0.00 36.28 3.96
717 790 2.925563 CAAAATGAAAAGGCGAGGATGC 59.074 45.455 0.00 0.00 0.00 3.91
718 791 4.178545 ACAAAATGAAAAGGCGAGGATG 57.821 40.909 0.00 0.00 0.00 3.51
748 821 9.533831 AATTCCATTCGCCTCCTTTTATTATAT 57.466 29.630 0.00 0.00 0.00 0.86
749 822 8.934023 AATTCCATTCGCCTCCTTTTATTATA 57.066 30.769 0.00 0.00 0.00 0.98
764 837 1.205417 AGCAGCCCAAAATTCCATTCG 59.795 47.619 0.00 0.00 0.00 3.34
785 858 4.851558 GCTTTATACAAAAGAAGTGTGGCG 59.148 41.667 1.78 0.00 0.00 5.69
847 921 2.596338 GGGTGTGGGTTTGGTCCG 60.596 66.667 0.00 0.00 0.00 4.79
893 984 0.183492 TGGTTGCTTGAGGCTTGAGT 59.817 50.000 0.00 0.00 42.39 3.41
917 1008 3.062466 GGGTTCTTCCTTGGCGCC 61.062 66.667 22.73 22.73 36.25 6.53
950 1041 1.614241 AACGGAGGGAAGGATCGGTG 61.614 60.000 0.00 0.00 0.00 4.94
951 1042 1.305887 AACGGAGGGAAGGATCGGT 60.306 57.895 0.00 0.00 0.00 4.69
952 1043 1.442148 GAACGGAGGGAAGGATCGG 59.558 63.158 0.00 0.00 0.00 4.18
953 1044 1.043673 AGGAACGGAGGGAAGGATCG 61.044 60.000 0.00 0.00 0.00 3.69
967 1058 4.493747 CCGGCGAGGACGAGGAAC 62.494 72.222 9.30 0.00 45.00 3.62
1048 1139 3.041940 ACGTGAAGGAAAGCGGCG 61.042 61.111 0.51 0.51 0.00 6.46
1061 1152 2.185004 AATTTCTCCCCAGACACGTG 57.815 50.000 15.48 15.48 0.00 4.49
1065 1156 3.568007 CGTTTCAAATTTCTCCCCAGACA 59.432 43.478 0.00 0.00 0.00 3.41
1074 1165 3.818773 ACCATCGGTCGTTTCAAATTTCT 59.181 39.130 0.00 0.00 0.00 2.52
1075 1166 3.911964 CACCATCGGTCGTTTCAAATTTC 59.088 43.478 0.00 0.00 31.02 2.17
1076 1167 3.855524 GCACCATCGGTCGTTTCAAATTT 60.856 43.478 0.00 0.00 31.02 1.82
1077 1168 2.351350 GCACCATCGGTCGTTTCAAATT 60.351 45.455 0.00 0.00 31.02 1.82
1079 1170 0.589223 GCACCATCGGTCGTTTCAAA 59.411 50.000 0.00 0.00 31.02 2.69
1080 1171 1.561717 CGCACCATCGGTCGTTTCAA 61.562 55.000 0.00 0.00 31.02 2.69
1081 1172 2.024868 CGCACCATCGGTCGTTTCA 61.025 57.895 0.00 0.00 31.02 2.69
1082 1173 2.025418 ACGCACCATCGGTCGTTTC 61.025 57.895 5.28 0.00 36.59 2.78
1084 1175 2.736995 CACGCACCATCGGTCGTT 60.737 61.111 7.58 0.00 37.36 3.85
1087 1178 3.490759 CTGCACGCACCATCGGTC 61.491 66.667 0.00 0.00 31.02 4.79
1188 1302 0.376152 TCCGCTCGTCGATCTTGTAC 59.624 55.000 0.00 0.00 41.67 2.90
1371 1485 2.812619 GGGAGGGATCCAGGCGAAG 61.813 68.421 15.23 0.00 0.00 3.79
1375 1489 1.450360 ATTAAGGGAGGGATCCAGGC 58.550 55.000 15.23 1.35 0.00 4.85
1377 1491 3.056080 TGGAATTAAGGGAGGGATCCAG 58.944 50.000 15.23 0.00 32.10 3.86
1378 1492 2.783510 GTGGAATTAAGGGAGGGATCCA 59.216 50.000 15.23 0.00 33.32 3.41
1379 1493 3.056832 AGTGGAATTAAGGGAGGGATCC 58.943 50.000 1.92 1.92 0.00 3.36
1380 1494 3.716872 TGAGTGGAATTAAGGGAGGGATC 59.283 47.826 0.00 0.00 0.00 3.36
1381 1495 3.459969 GTGAGTGGAATTAAGGGAGGGAT 59.540 47.826 0.00 0.00 0.00 3.85
1382 1496 2.844348 GTGAGTGGAATTAAGGGAGGGA 59.156 50.000 0.00 0.00 0.00 4.20
1383 1497 2.846827 AGTGAGTGGAATTAAGGGAGGG 59.153 50.000 0.00 0.00 0.00 4.30
1384 1498 3.118223 GGAGTGAGTGGAATTAAGGGAGG 60.118 52.174 0.00 0.00 0.00 4.30
1385 1499 3.118223 GGGAGTGAGTGGAATTAAGGGAG 60.118 52.174 0.00 0.00 0.00 4.30
1386 1500 2.844348 GGGAGTGAGTGGAATTAAGGGA 59.156 50.000 0.00 0.00 0.00 4.20
1387 1501 2.846827 AGGGAGTGAGTGGAATTAAGGG 59.153 50.000 0.00 0.00 0.00 3.95
1388 1502 4.226168 AGAAGGGAGTGAGTGGAATTAAGG 59.774 45.833 0.00 0.00 0.00 2.69
1389 1503 5.428184 AGAAGGGAGTGAGTGGAATTAAG 57.572 43.478 0.00 0.00 0.00 1.85
1390 1504 5.548056 AGAAGAAGGGAGTGAGTGGAATTAA 59.452 40.000 0.00 0.00 0.00 1.40
1391 1505 5.094387 AGAAGAAGGGAGTGAGTGGAATTA 58.906 41.667 0.00 0.00 0.00 1.40
1392 1506 3.913163 AGAAGAAGGGAGTGAGTGGAATT 59.087 43.478 0.00 0.00 0.00 2.17
1393 1507 3.517500 GAGAAGAAGGGAGTGAGTGGAAT 59.482 47.826 0.00 0.00 0.00 3.01
1394 1508 2.900546 GAGAAGAAGGGAGTGAGTGGAA 59.099 50.000 0.00 0.00 0.00 3.53
1395 1509 2.530701 GAGAAGAAGGGAGTGAGTGGA 58.469 52.381 0.00 0.00 0.00 4.02
1396 1510 1.203523 CGAGAAGAAGGGAGTGAGTGG 59.796 57.143 0.00 0.00 0.00 4.00
1397 1511 1.889829 ACGAGAAGAAGGGAGTGAGTG 59.110 52.381 0.00 0.00 0.00 3.51
1398 1512 2.296073 ACGAGAAGAAGGGAGTGAGT 57.704 50.000 0.00 0.00 0.00 3.41
1399 1513 3.243907 ACAAACGAGAAGAAGGGAGTGAG 60.244 47.826 0.00 0.00 0.00 3.51
1400 1514 2.698797 ACAAACGAGAAGAAGGGAGTGA 59.301 45.455 0.00 0.00 0.00 3.41
1401 1515 3.113260 ACAAACGAGAAGAAGGGAGTG 57.887 47.619 0.00 0.00 0.00 3.51
1402 1516 3.134081 TGAACAAACGAGAAGAAGGGAGT 59.866 43.478 0.00 0.00 0.00 3.85
1403 1517 3.495001 GTGAACAAACGAGAAGAAGGGAG 59.505 47.826 0.00 0.00 0.00 4.30
1404 1518 3.463944 GTGAACAAACGAGAAGAAGGGA 58.536 45.455 0.00 0.00 0.00 4.20
1405 1519 2.548480 GGTGAACAAACGAGAAGAAGGG 59.452 50.000 0.00 0.00 0.00 3.95
1406 1520 2.221055 CGGTGAACAAACGAGAAGAAGG 59.779 50.000 0.00 0.00 0.00 3.46
1407 1521 2.348591 GCGGTGAACAAACGAGAAGAAG 60.349 50.000 0.00 0.00 0.00 2.85
1408 1522 1.595794 GCGGTGAACAAACGAGAAGAA 59.404 47.619 0.00 0.00 0.00 2.52
1409 1523 1.214367 GCGGTGAACAAACGAGAAGA 58.786 50.000 0.00 0.00 0.00 2.87
1410 1524 0.234884 GGCGGTGAACAAACGAGAAG 59.765 55.000 0.00 0.00 0.00 2.85
1420 1534 0.179156 TACTCGATTCGGCGGTGAAC 60.179 55.000 7.21 0.00 0.00 3.18
1421 1535 0.527113 TTACTCGATTCGGCGGTGAA 59.473 50.000 7.21 0.00 0.00 3.18
1423 1537 1.352114 TTTTACTCGATTCGGCGGTG 58.648 50.000 7.21 0.00 0.00 4.94
1426 1540 3.362986 CCATGATTTTACTCGATTCGGCG 60.363 47.826 0.00 0.00 0.00 6.46
1427 1541 3.607078 GCCATGATTTTACTCGATTCGGC 60.607 47.826 6.18 0.00 0.00 5.54
1428 1542 3.362986 CGCCATGATTTTACTCGATTCGG 60.363 47.826 6.18 0.00 0.00 4.30
1429 1543 3.362986 CCGCCATGATTTTACTCGATTCG 60.363 47.826 0.00 0.00 0.00 3.34
1430 1544 3.607078 GCCGCCATGATTTTACTCGATTC 60.607 47.826 0.00 0.00 0.00 2.52
1431 1545 2.290641 GCCGCCATGATTTTACTCGATT 59.709 45.455 0.00 0.00 0.00 3.34
1432 1546 1.873591 GCCGCCATGATTTTACTCGAT 59.126 47.619 0.00 0.00 0.00 3.59
1433 1547 1.134521 AGCCGCCATGATTTTACTCGA 60.135 47.619 0.00 0.00 0.00 4.04
1434 1548 1.003545 CAGCCGCCATGATTTTACTCG 60.004 52.381 0.00 0.00 0.00 4.18
1435 1549 2.288666 TCAGCCGCCATGATTTTACTC 58.711 47.619 0.00 0.00 0.00 2.59
1437 1551 2.880890 AGATCAGCCGCCATGATTTTAC 59.119 45.455 0.00 0.00 37.52 2.01
1438 1552 3.141398 GAGATCAGCCGCCATGATTTTA 58.859 45.455 0.00 0.00 37.52 1.52
1439 1553 1.952296 GAGATCAGCCGCCATGATTTT 59.048 47.619 0.00 0.00 37.52 1.82
1451 1570 3.386768 TGGCTAATAACCGAGATCAGC 57.613 47.619 0.00 0.00 0.00 4.26
1459 1578 6.384224 TCGTAATCAGTATGGCTAATAACCG 58.616 40.000 0.00 0.00 36.16 4.44
1484 1603 8.551205 CGCAGTATCCGCATCAATAATTATAAT 58.449 33.333 0.00 0.00 0.00 1.28
1485 1604 7.762159 TCGCAGTATCCGCATCAATAATTATAA 59.238 33.333 0.00 0.00 0.00 0.98
1486 1605 7.262048 TCGCAGTATCCGCATCAATAATTATA 58.738 34.615 0.00 0.00 0.00 0.98
1487 1606 6.106003 TCGCAGTATCCGCATCAATAATTAT 58.894 36.000 0.00 0.00 0.00 1.28
1488 1607 5.474825 TCGCAGTATCCGCATCAATAATTA 58.525 37.500 0.00 0.00 0.00 1.40
1507 1626 0.035152 AGAAACCATCCAGCATCGCA 60.035 50.000 0.00 0.00 0.00 5.10
1577 1704 4.742438 TCGGACAATCAAAGCTGTTTAC 57.258 40.909 0.00 0.00 0.00 2.01
1605 1732 7.437862 TGTCTTGCAAGAAATTGATGTAAAACC 59.562 33.333 29.99 12.36 36.68 3.27
1607 1734 8.980610 CATGTCTTGCAAGAAATTGATGTAAAA 58.019 29.630 29.99 0.37 36.68 1.52
1608 1735 8.523523 CATGTCTTGCAAGAAATTGATGTAAA 57.476 30.769 29.99 0.85 36.68 2.01
1625 1771 1.610038 TGGCTTGACTTGCATGTCTTG 59.390 47.619 27.18 20.90 37.79 3.02
1630 1776 3.520290 ATGAATGGCTTGACTTGCATG 57.480 42.857 0.00 0.00 0.00 4.06
1639 1785 2.735126 GCCGTGGTTTATGAATGGCTTG 60.735 50.000 0.00 0.00 38.00 4.01
1640 1786 1.476488 GCCGTGGTTTATGAATGGCTT 59.524 47.619 0.00 0.00 38.00 4.35
1641 1787 1.102978 GCCGTGGTTTATGAATGGCT 58.897 50.000 0.00 0.00 38.00 4.75
1642 1788 0.814457 TGCCGTGGTTTATGAATGGC 59.186 50.000 0.00 0.00 41.33 4.40
1643 1789 1.202290 GCTGCCGTGGTTTATGAATGG 60.202 52.381 0.00 0.00 0.00 3.16
1722 1868 1.463444 CTACCAACTTGGCGTTAGTGC 59.537 52.381 7.81 0.00 42.67 4.40
1758 1904 8.673711 TCAATTGATGTACTAGTAATTTGCACC 58.326 33.333 3.38 0.00 0.00 5.01
1775 1921 5.928976 TGGTAGGACTATGGTCAATTGATG 58.071 41.667 12.12 3.06 43.77 3.07
1804 1950 4.683781 GCTTGATTGCGATTTTGTTTGGTA 59.316 37.500 0.00 0.00 0.00 3.25
1805 1951 3.494251 GCTTGATTGCGATTTTGTTTGGT 59.506 39.130 0.00 0.00 0.00 3.67
1806 1952 3.493877 TGCTTGATTGCGATTTTGTTTGG 59.506 39.130 0.00 0.00 35.36 3.28
1830 1976 1.135888 CAGTGACGATGCAATGTGTGG 60.136 52.381 0.00 0.00 0.00 4.17
1922 2068 3.691609 GTCAATTTCTCTGGCTACCTTGG 59.308 47.826 0.00 0.00 0.00 3.61
1929 2075 3.795688 TTCCTGTCAATTTCTCTGGCT 57.204 42.857 0.00 0.00 0.00 4.75
1931 2077 5.392811 GCAGATTTCCTGTCAATTTCTCTGG 60.393 44.000 0.00 0.00 44.71 3.86
1933 2079 5.319453 TGCAGATTTCCTGTCAATTTCTCT 58.681 37.500 0.00 0.00 44.71 3.10
1962 2120 1.307097 GGGCTGATTGCAGAGTCATC 58.693 55.000 0.00 0.00 45.17 2.92
2007 2169 2.202349 GCTTGATGCGTGTTCGGC 60.202 61.111 0.00 0.00 37.56 5.54
2023 2185 4.881273 ACCTTTGTGGAAAATGGAAAAAGC 59.119 37.500 0.00 0.00 39.71 3.51
2043 2205 1.729267 ATGGGCCAGACAACCAACCT 61.729 55.000 13.78 0.00 37.89 3.50
2044 2206 0.039035 TATGGGCCAGACAACCAACC 59.961 55.000 13.78 0.00 37.89 3.77
2065 2227 4.659172 TTGACAAGGCAGCGGGGG 62.659 66.667 0.00 0.00 0.00 5.40
2141 2307 4.586884 AGCAAGAAAGAGAAGCATGATGA 58.413 39.130 0.00 0.00 0.00 2.92
2148 2314 3.639716 AGCAAAGCAAGAAAGAGAAGC 57.360 42.857 0.00 0.00 0.00 3.86
2152 2322 4.047142 GGACAAAGCAAAGCAAGAAAGAG 58.953 43.478 0.00 0.00 0.00 2.85
2157 2327 2.481795 GCAAGGACAAAGCAAAGCAAGA 60.482 45.455 0.00 0.00 0.00 3.02
2203 2373 7.843490 AAATAATGCAGCGAAGAGTACTAAA 57.157 32.000 0.00 0.00 0.00 1.85
2213 2383 7.027161 GGTTAAGAGAAAAATAATGCAGCGAA 58.973 34.615 0.00 0.00 0.00 4.70
2216 2386 6.042777 GGGGTTAAGAGAAAAATAATGCAGC 58.957 40.000 0.00 0.00 0.00 5.25
2255 2429 2.805099 CTGATCTGATTAAAGAGCCCGC 59.195 50.000 0.00 0.00 31.42 6.13
2256 2430 4.327982 TCTGATCTGATTAAAGAGCCCG 57.672 45.455 0.00 0.00 31.42 6.13
2257 2431 6.112927 AGATCTGATCTGATTAAAGAGCCC 57.887 41.667 18.93 1.30 38.44 5.19
2313 2487 9.088512 GCGATAAATCTAATATACAAGGACAGG 57.911 37.037 0.00 0.00 0.00 4.00
2369 2543 7.225397 CGAAAGACAATCGTAAAAGGTTACTC 58.775 38.462 0.00 0.00 37.97 2.59
2394 2568 1.541588 GCTCCCAGTGAAATGTTGACC 59.458 52.381 0.00 0.00 0.00 4.02
2410 2584 1.327764 CCACTTTCGATTAAGCGCTCC 59.672 52.381 12.06 0.00 0.00 4.70
2411 2585 1.327764 CCCACTTTCGATTAAGCGCTC 59.672 52.381 12.06 0.00 0.00 5.03
2412 2586 1.369625 CCCACTTTCGATTAAGCGCT 58.630 50.000 2.64 2.64 0.00 5.92
2413 2587 0.248094 GCCCACTTTCGATTAAGCGC 60.248 55.000 8.54 0.00 0.00 5.92
2414 2588 1.062587 CTGCCCACTTTCGATTAAGCG 59.937 52.381 6.82 6.82 0.00 4.68
2430 2604 3.760684 AGGAACTGATTGATCAAACTGCC 59.239 43.478 13.09 10.82 37.18 4.85
2435 2609 5.246981 ACAGGAGGAACTGATTGATCAAA 57.753 39.130 13.09 0.00 41.55 2.69
2458 2632 7.503566 TGCTTTTGATAAGATAATCCAAGGAGG 59.496 37.037 0.00 0.00 39.47 4.30
2459 2633 8.455903 TGCTTTTGATAAGATAATCCAAGGAG 57.544 34.615 0.00 0.00 0.00 3.69
2460 2634 8.821686 TTGCTTTTGATAAGATAATCCAAGGA 57.178 30.769 0.00 0.00 0.00 3.36
2461 2635 7.650903 GCTTGCTTTTGATAAGATAATCCAAGG 59.349 37.037 0.00 0.00 0.00 3.61
2462 2636 8.192774 TGCTTGCTTTTGATAAGATAATCCAAG 58.807 33.333 0.00 0.00 0.00 3.61
2463 2637 7.975616 GTGCTTGCTTTTGATAAGATAATCCAA 59.024 33.333 0.00 0.00 0.00 3.53
2464 2638 7.483307 GTGCTTGCTTTTGATAAGATAATCCA 58.517 34.615 0.00 0.00 0.00 3.41
2465 2639 6.634436 CGTGCTTGCTTTTGATAAGATAATCC 59.366 38.462 0.00 0.00 0.00 3.01
2528 2702 2.742589 GACAGGCTTGCTAACCTAACAC 59.257 50.000 0.00 0.00 33.38 3.32
2671 2845 6.150140 GCATCCTAATCCCACTGAATTATGAC 59.850 42.308 0.00 0.00 0.00 3.06
2698 2872 2.642427 ACCAATCGAGTAATGCATGCA 58.358 42.857 25.04 25.04 0.00 3.96
2699 2873 3.065233 TCAACCAATCGAGTAATGCATGC 59.935 43.478 11.82 11.82 0.00 4.06
2702 2876 4.332543 GTCATCAACCAATCGAGTAATGCA 59.667 41.667 0.00 0.00 0.00 3.96
2703 2877 4.550831 CGTCATCAACCAATCGAGTAATGC 60.551 45.833 0.00 0.00 0.00 3.56
2704 2878 4.803613 TCGTCATCAACCAATCGAGTAATG 59.196 41.667 0.00 0.00 0.00 1.90
2705 2879 5.006153 TCGTCATCAACCAATCGAGTAAT 57.994 39.130 0.00 0.00 0.00 1.89
2725 2915 6.936374 AGAAAAACAAAGCAACAAATCATCG 58.064 32.000 0.00 0.00 0.00 3.84
2740 2936 5.505654 GCGACCTGAATGAAGAGAAAAACAA 60.506 40.000 0.00 0.00 0.00 2.83
2793 2989 1.862147 CTTCGACGTCGCGTACAGG 60.862 63.158 32.19 12.04 41.37 4.00
3011 3208 1.891919 GAGCACACGAGCCAACCAA 60.892 57.895 0.00 0.00 34.23 3.67
3012 3209 2.280797 GAGCACACGAGCCAACCA 60.281 61.111 0.00 0.00 34.23 3.67
3013 3210 2.031163 AGAGCACACGAGCCAACC 59.969 61.111 0.00 0.00 34.23 3.77
3014 3211 2.959357 GCAGAGCACACGAGCCAAC 61.959 63.158 0.00 0.00 34.23 3.77
3015 3212 2.666190 GCAGAGCACACGAGCCAA 60.666 61.111 0.00 0.00 34.23 4.52
3049 3246 1.153823 AAACCCTCGTCAGATCGCG 60.154 57.895 0.00 0.00 0.00 5.87
3079 3276 4.049186 CCACGGATCGGTAATTTCTACTG 58.951 47.826 5.50 0.00 0.00 2.74
3082 3279 2.696707 AGCCACGGATCGGTAATTTCTA 59.303 45.455 5.50 0.00 0.00 2.10
3084 3281 1.949465 AGCCACGGATCGGTAATTTC 58.051 50.000 5.50 0.00 0.00 2.17
3091 3288 0.179073 AATCTCAAGCCACGGATCGG 60.179 55.000 0.00 0.00 0.00 4.18
3152 3349 1.594518 CGTTTCATTAATCCGCTGCCG 60.595 52.381 0.00 0.00 0.00 5.69
3228 3425 3.317150 GGTTGAAGCACAATAGCAAACC 58.683 45.455 0.00 0.00 40.76 3.27
3270 3472 0.110486 ACCCAGAGCAATCAACCGTT 59.890 50.000 0.00 0.00 0.00 4.44
3357 3566 1.068472 AGTCGCTCGTGTCCTTACAAG 60.068 52.381 0.00 0.00 37.36 3.16
3373 3582 7.385205 TCCTTACAAAAATCTGAAGAAGAGTCG 59.615 37.037 0.00 0.00 38.67 4.18
3411 3620 0.380378 TGAAAAACACACGCTGCCTC 59.620 50.000 0.00 0.00 0.00 4.70
3412 3621 1.032014 ATGAAAAACACACGCTGCCT 58.968 45.000 0.00 0.00 0.00 4.75
3416 3640 0.934436 GCGCATGAAAAACACACGCT 60.934 50.000 0.30 0.00 45.95 5.07
3440 3664 3.181397 CCATGTTTTAGATTTGGCGCAG 58.819 45.455 10.83 0.00 0.00 5.18
3441 3665 2.094286 CCCATGTTTTAGATTTGGCGCA 60.094 45.455 10.83 0.00 0.00 6.09
3442 3666 2.539476 CCCATGTTTTAGATTTGGCGC 58.461 47.619 0.00 0.00 0.00 6.53
3468 3692 8.041919 TCGGGATGTTACATTATGTTGTTTCTA 58.958 33.333 2.23 0.00 0.00 2.10
3469 3693 6.882140 TCGGGATGTTACATTATGTTGTTTCT 59.118 34.615 2.23 0.00 0.00 2.52
3472 3696 7.556275 AGAATCGGGATGTTACATTATGTTGTT 59.444 33.333 2.23 0.00 0.00 2.83
3483 3707 5.646360 TGGAAAAAGAGAATCGGGATGTTAC 59.354 40.000 0.00 0.00 42.67 2.50
3484 3708 5.811190 TGGAAAAAGAGAATCGGGATGTTA 58.189 37.500 0.00 0.00 42.67 2.41
3485 3709 4.662278 TGGAAAAAGAGAATCGGGATGTT 58.338 39.130 0.00 0.00 42.67 2.71
3486 3710 4.301072 TGGAAAAAGAGAATCGGGATGT 57.699 40.909 0.00 0.00 42.67 3.06
3487 3711 5.643379 TTTGGAAAAAGAGAATCGGGATG 57.357 39.130 0.00 0.00 42.67 3.51
3488 3712 6.664428 TTTTTGGAAAAAGAGAATCGGGAT 57.336 33.333 0.00 0.00 42.67 3.85
3489 3713 6.266558 TGATTTTTGGAAAAAGAGAATCGGGA 59.733 34.615 3.83 0.00 40.78 5.14
3490 3714 6.454795 TGATTTTTGGAAAAAGAGAATCGGG 58.545 36.000 3.83 0.00 40.78 5.14
3491 3715 7.116805 CCTTGATTTTTGGAAAAAGAGAATCGG 59.883 37.037 3.83 0.00 40.78 4.18
3492 3716 7.359514 GCCTTGATTTTTGGAAAAAGAGAATCG 60.360 37.037 3.83 0.00 40.78 3.34
3493 3717 7.359514 CGCCTTGATTTTTGGAAAAAGAGAATC 60.360 37.037 3.83 0.00 40.78 2.52
3494 3718 6.424812 CGCCTTGATTTTTGGAAAAAGAGAAT 59.575 34.615 3.83 0.00 40.78 2.40
3495 3719 5.752955 CGCCTTGATTTTTGGAAAAAGAGAA 59.247 36.000 3.83 0.00 40.78 2.87
3496 3720 5.068460 TCGCCTTGATTTTTGGAAAAAGAGA 59.932 36.000 3.83 0.00 40.78 3.10
3497 3721 5.288804 TCGCCTTGATTTTTGGAAAAAGAG 58.711 37.500 3.83 2.43 40.78 2.85
3498 3722 5.068460 TCTCGCCTTGATTTTTGGAAAAAGA 59.932 36.000 3.83 0.00 40.78 2.52
3499 3723 5.288804 TCTCGCCTTGATTTTTGGAAAAAG 58.711 37.500 3.83 0.00 40.78 2.27
3500 3724 5.269505 TCTCGCCTTGATTTTTGGAAAAA 57.730 34.783 0.00 0.00 41.59 1.94
3501 3725 4.927978 TCTCGCCTTGATTTTTGGAAAA 57.072 36.364 0.00 0.00 0.00 2.29
3502 3726 4.927978 TTCTCGCCTTGATTTTTGGAAA 57.072 36.364 0.00 0.00 0.00 3.13
3503 3727 4.927978 TTTCTCGCCTTGATTTTTGGAA 57.072 36.364 0.00 0.00 0.00 3.53
3504 3728 4.927978 TTTTCTCGCCTTGATTTTTGGA 57.072 36.364 0.00 0.00 0.00 3.53
3505 3729 6.202570 TGAAATTTTCTCGCCTTGATTTTTGG 59.797 34.615 10.33 0.00 0.00 3.28
3506 3730 7.176285 TGAAATTTTCTCGCCTTGATTTTTG 57.824 32.000 10.33 0.00 0.00 2.44
3507 3731 7.967890 ATGAAATTTTCTCGCCTTGATTTTT 57.032 28.000 10.33 0.00 0.00 1.94
3508 3732 7.967890 AATGAAATTTTCTCGCCTTGATTTT 57.032 28.000 10.33 0.00 26.74 1.82
3509 3733 7.442062 ACAAATGAAATTTTCTCGCCTTGATTT 59.558 29.630 10.33 3.21 46.10 2.17
3510 3734 6.930722 ACAAATGAAATTTTCTCGCCTTGATT 59.069 30.769 10.33 0.00 46.10 2.57
3511 3735 6.458210 ACAAATGAAATTTTCTCGCCTTGAT 58.542 32.000 10.33 0.00 46.10 2.57
3512 3736 5.841810 ACAAATGAAATTTTCTCGCCTTGA 58.158 33.333 10.33 0.00 46.10 3.02
3513 3737 6.529463 AACAAATGAAATTTTCTCGCCTTG 57.471 33.333 10.33 8.44 46.10 3.61
3514 3738 7.552458 AAAACAAATGAAATTTTCTCGCCTT 57.448 28.000 10.33 0.00 46.10 4.35
3515 3739 7.552458 AAAAACAAATGAAATTTTCTCGCCT 57.448 28.000 10.33 0.00 46.10 5.52
3573 3797 9.990868 AGGTTGGTATTAGTCAAATTAAATCCT 57.009 29.630 0.00 0.00 0.00 3.24
3592 3816 8.972458 AAACTGCAATTTTAATTTAGGTTGGT 57.028 26.923 0.00 0.00 0.00 3.67
3593 3817 9.662545 CAAAACTGCAATTTTAATTTAGGTTGG 57.337 29.630 5.44 0.00 30.57 3.77
3602 3826 9.822185 AGAGAAGAACAAAACTGCAATTTTAAT 57.178 25.926 5.44 0.00 30.57 1.40
3603 3827 9.651913 AAGAGAAGAACAAAACTGCAATTTTAA 57.348 25.926 5.44 0.00 30.57 1.52
3604 3828 9.086336 CAAGAGAAGAACAAAACTGCAATTTTA 57.914 29.630 5.44 0.00 30.57 1.52
3605 3829 7.603784 ACAAGAGAAGAACAAAACTGCAATTTT 59.396 29.630 0.00 0.00 31.87 1.82
3606 3830 7.063780 CACAAGAGAAGAACAAAACTGCAATTT 59.936 33.333 0.00 0.00 0.00 1.82
3607 3831 6.532657 CACAAGAGAAGAACAAAACTGCAATT 59.467 34.615 0.00 0.00 0.00 2.32
3608 3832 6.038356 CACAAGAGAAGAACAAAACTGCAAT 58.962 36.000 0.00 0.00 0.00 3.56
3609 3833 5.401550 CACAAGAGAAGAACAAAACTGCAA 58.598 37.500 0.00 0.00 0.00 4.08
3610 3834 4.142403 CCACAAGAGAAGAACAAAACTGCA 60.142 41.667 0.00 0.00 0.00 4.41
3611 3835 4.142381 ACCACAAGAGAAGAACAAAACTGC 60.142 41.667 0.00 0.00 0.00 4.40
3612 3836 5.567138 ACCACAAGAGAAGAACAAAACTG 57.433 39.130 0.00 0.00 0.00 3.16
3613 3837 5.105756 CCAACCACAAGAGAAGAACAAAACT 60.106 40.000 0.00 0.00 0.00 2.66
3614 3838 5.102313 CCAACCACAAGAGAAGAACAAAAC 58.898 41.667 0.00 0.00 0.00 2.43
3615 3839 4.159506 CCCAACCACAAGAGAAGAACAAAA 59.840 41.667 0.00 0.00 0.00 2.44
3616 3840 3.699038 CCCAACCACAAGAGAAGAACAAA 59.301 43.478 0.00 0.00 0.00 2.83
3617 3841 3.287222 CCCAACCACAAGAGAAGAACAA 58.713 45.455 0.00 0.00 0.00 2.83
3618 3842 2.241176 ACCCAACCACAAGAGAAGAACA 59.759 45.455 0.00 0.00 0.00 3.18
3619 3843 2.932261 ACCCAACCACAAGAGAAGAAC 58.068 47.619 0.00 0.00 0.00 3.01
3620 3844 3.662759 AACCCAACCACAAGAGAAGAA 57.337 42.857 0.00 0.00 0.00 2.52
3621 3845 3.662759 AAACCCAACCACAAGAGAAGA 57.337 42.857 0.00 0.00 0.00 2.87
3622 3846 6.405278 AAATAAACCCAACCACAAGAGAAG 57.595 37.500 0.00 0.00 0.00 2.85
3623 3847 6.800072 AAAATAAACCCAACCACAAGAGAA 57.200 33.333 0.00 0.00 0.00 2.87
3624 3848 8.364142 CAATAAAATAAACCCAACCACAAGAGA 58.636 33.333 0.00 0.00 0.00 3.10
3625 3849 7.117667 GCAATAAAATAAACCCAACCACAAGAG 59.882 37.037 0.00 0.00 0.00 2.85
3626 3850 6.931840 GCAATAAAATAAACCCAACCACAAGA 59.068 34.615 0.00 0.00 0.00 3.02
3627 3851 6.148645 GGCAATAAAATAAACCCAACCACAAG 59.851 38.462 0.00 0.00 0.00 3.16
3628 3852 5.998363 GGCAATAAAATAAACCCAACCACAA 59.002 36.000 0.00 0.00 0.00 3.33
3629 3853 5.308237 AGGCAATAAAATAAACCCAACCACA 59.692 36.000 0.00 0.00 0.00 4.17
3630 3854 5.800296 AGGCAATAAAATAAACCCAACCAC 58.200 37.500 0.00 0.00 0.00 4.16
3631 3855 5.782845 AGAGGCAATAAAATAAACCCAACCA 59.217 36.000 0.00 0.00 0.00 3.67
3632 3856 6.106003 CAGAGGCAATAAAATAAACCCAACC 58.894 40.000 0.00 0.00 0.00 3.77
3633 3857 6.106003 CCAGAGGCAATAAAATAAACCCAAC 58.894 40.000 0.00 0.00 0.00 3.77
3634 3858 6.293004 CCAGAGGCAATAAAATAAACCCAA 57.707 37.500 0.00 0.00 0.00 4.12
3635 3859 5.930837 CCAGAGGCAATAAAATAAACCCA 57.069 39.130 0.00 0.00 0.00 4.51
3682 3906 7.766278 TGGAGCAATAGCAAACAACTTTAAAAA 59.234 29.630 0.00 0.00 45.49 1.94
3683 3907 7.268586 TGGAGCAATAGCAAACAACTTTAAAA 58.731 30.769 0.00 0.00 45.49 1.52
3684 3908 6.810911 TGGAGCAATAGCAAACAACTTTAAA 58.189 32.000 0.00 0.00 45.49 1.52
3685 3909 6.398234 TGGAGCAATAGCAAACAACTTTAA 57.602 33.333 0.00 0.00 45.49 1.52
3686 3910 6.212955 GTTGGAGCAATAGCAAACAACTTTA 58.787 36.000 11.74 0.00 45.49 1.85
3687 3911 4.935352 TGGAGCAATAGCAAACAACTTT 57.065 36.364 0.00 0.00 45.49 2.66
3688 3912 4.620982 GTTGGAGCAATAGCAAACAACTT 58.379 39.130 11.74 0.00 45.49 2.66
3689 3913 3.891366 AGTTGGAGCAATAGCAAACAACT 59.109 39.130 14.26 14.26 46.48 3.16
3690 3914 4.243007 AGTTGGAGCAATAGCAAACAAC 57.757 40.909 11.32 11.32 44.16 3.32
3691 3915 4.935352 AAGTTGGAGCAATAGCAAACAA 57.065 36.364 0.00 0.00 45.49 2.83
3692 3916 4.935352 AAAGTTGGAGCAATAGCAAACA 57.065 36.364 0.00 0.00 45.49 2.83
3693 3917 6.531594 GGATTAAAGTTGGAGCAATAGCAAAC 59.468 38.462 0.00 0.00 45.49 2.93
3694 3918 6.350949 GGGATTAAAGTTGGAGCAATAGCAAA 60.351 38.462 0.00 0.00 45.49 3.68
3695 3919 5.127031 GGGATTAAAGTTGGAGCAATAGCAA 59.873 40.000 0.00 0.00 45.49 3.91
3696 3920 4.644685 GGGATTAAAGTTGGAGCAATAGCA 59.355 41.667 0.00 0.00 45.49 3.49
3697 3921 4.889995 AGGGATTAAAGTTGGAGCAATAGC 59.110 41.667 0.00 0.00 42.56 2.97
3698 3922 7.340487 AGAAAGGGATTAAAGTTGGAGCAATAG 59.660 37.037 0.00 0.00 0.00 1.73
3699 3923 7.182060 AGAAAGGGATTAAAGTTGGAGCAATA 58.818 34.615 0.00 0.00 0.00 1.90
3700 3924 6.019108 AGAAAGGGATTAAAGTTGGAGCAAT 58.981 36.000 0.00 0.00 0.00 3.56
3701 3925 5.393866 AGAAAGGGATTAAAGTTGGAGCAA 58.606 37.500 0.00 0.00 0.00 3.91
3702 3926 4.998051 AGAAAGGGATTAAAGTTGGAGCA 58.002 39.130 0.00 0.00 0.00 4.26
3703 3927 6.415573 TCTAGAAAGGGATTAAAGTTGGAGC 58.584 40.000 0.00 0.00 0.00 4.70
3704 3928 9.467796 AAATCTAGAAAGGGATTAAAGTTGGAG 57.532 33.333 0.00 0.00 32.65 3.86
3705 3929 9.822727 AAAATCTAGAAAGGGATTAAAGTTGGA 57.177 29.630 0.00 0.00 32.65 3.53
3761 3985 8.705594 CCAGGGTTTGATAGAGAGAATAAGTAA 58.294 37.037 0.00 0.00 0.00 2.24
3762 3986 7.202011 GCCAGGGTTTGATAGAGAGAATAAGTA 60.202 40.741 0.00 0.00 0.00 2.24
3763 3987 6.408662 GCCAGGGTTTGATAGAGAGAATAAGT 60.409 42.308 0.00 0.00 0.00 2.24
3764 3988 5.994668 GCCAGGGTTTGATAGAGAGAATAAG 59.005 44.000 0.00 0.00 0.00 1.73
3765 3989 5.163195 GGCCAGGGTTTGATAGAGAGAATAA 60.163 44.000 0.00 0.00 0.00 1.40
3766 3990 4.348168 GGCCAGGGTTTGATAGAGAGAATA 59.652 45.833 0.00 0.00 0.00 1.75
3767 3991 3.137360 GGCCAGGGTTTGATAGAGAGAAT 59.863 47.826 0.00 0.00 0.00 2.40
3768 3992 2.505819 GGCCAGGGTTTGATAGAGAGAA 59.494 50.000 0.00 0.00 0.00 2.87
3769 3993 2.119495 GGCCAGGGTTTGATAGAGAGA 58.881 52.381 0.00 0.00 0.00 3.10
3770 3994 1.839994 TGGCCAGGGTTTGATAGAGAG 59.160 52.381 0.00 0.00 0.00 3.20
3771 3995 1.965414 TGGCCAGGGTTTGATAGAGA 58.035 50.000 0.00 0.00 0.00 3.10
3772 3996 4.437682 TTATGGCCAGGGTTTGATAGAG 57.562 45.455 13.05 0.00 0.00 2.43
3773 3997 5.402054 AATTATGGCCAGGGTTTGATAGA 57.598 39.130 13.05 0.00 0.00 1.98
3774 3998 6.462909 GGAAAATTATGGCCAGGGTTTGATAG 60.463 42.308 13.05 0.00 0.00 2.08
3775 3999 5.365314 GGAAAATTATGGCCAGGGTTTGATA 59.635 40.000 13.05 0.00 0.00 2.15
3776 4000 4.164030 GGAAAATTATGGCCAGGGTTTGAT 59.836 41.667 13.05 0.00 0.00 2.57
3777 4001 3.517500 GGAAAATTATGGCCAGGGTTTGA 59.482 43.478 13.05 0.00 0.00 2.69
3778 4002 3.262915 TGGAAAATTATGGCCAGGGTTTG 59.737 43.478 13.05 0.00 0.00 2.93
3779 4003 3.525862 TGGAAAATTATGGCCAGGGTTT 58.474 40.909 13.05 8.89 0.00 3.27
3780 4004 3.197927 TGGAAAATTATGGCCAGGGTT 57.802 42.857 13.05 2.12 0.00 4.11
3781 4005 2.938428 TGGAAAATTATGGCCAGGGT 57.062 45.000 13.05 0.00 0.00 4.34
3782 4006 2.435437 CCTTGGAAAATTATGGCCAGGG 59.565 50.000 13.05 0.00 40.61 4.45
3783 4007 3.106827 ACCTTGGAAAATTATGGCCAGG 58.893 45.455 13.05 4.44 0.00 4.45
3784 4008 4.709397 TGTACCTTGGAAAATTATGGCCAG 59.291 41.667 13.05 0.00 0.00 4.85
3785 4009 4.678256 TGTACCTTGGAAAATTATGGCCA 58.322 39.130 8.56 8.56 0.00 5.36
3786 4010 5.669164 TTGTACCTTGGAAAATTATGGCC 57.331 39.130 0.00 0.00 0.00 5.36
3787 4011 6.980397 CAGATTGTACCTTGGAAAATTATGGC 59.020 38.462 0.00 0.00 0.00 4.40
3788 4012 8.292444 TCAGATTGTACCTTGGAAAATTATGG 57.708 34.615 0.00 0.00 0.00 2.74
3792 4016 9.093458 AGAAATCAGATTGTACCTTGGAAAATT 57.907 29.630 0.00 0.00 0.00 1.82
3793 4017 8.655935 AGAAATCAGATTGTACCTTGGAAAAT 57.344 30.769 0.00 0.00 0.00 1.82
3794 4018 8.477419 AAGAAATCAGATTGTACCTTGGAAAA 57.523 30.769 0.00 0.00 0.00 2.29
3795 4019 8.477419 AAAGAAATCAGATTGTACCTTGGAAA 57.523 30.769 0.00 0.00 0.00 3.13
3796 4020 7.944554 AGAAAGAAATCAGATTGTACCTTGGAA 59.055 33.333 0.00 0.00 0.00 3.53
3797 4021 7.461749 AGAAAGAAATCAGATTGTACCTTGGA 58.538 34.615 0.00 0.00 0.00 3.53
3798 4022 7.693969 AGAAAGAAATCAGATTGTACCTTGG 57.306 36.000 0.00 0.00 0.00 3.61
3799 4023 9.971922 AAAAGAAAGAAATCAGATTGTACCTTG 57.028 29.630 0.00 0.00 0.00 3.61
3801 4025 9.579932 AGAAAAGAAAGAAATCAGATTGTACCT 57.420 29.630 0.00 0.00 0.00 3.08
3802 4026 9.833182 GAGAAAAGAAAGAAATCAGATTGTACC 57.167 33.333 0.00 0.00 0.00 3.34
3814 4038 8.807581 GCGAAAGAAAATGAGAAAAGAAAGAAA 58.192 29.630 0.00 0.00 0.00 2.52
3815 4039 7.435192 GGCGAAAGAAAATGAGAAAAGAAAGAA 59.565 33.333 0.00 0.00 0.00 2.52
3816 4040 6.918022 GGCGAAAGAAAATGAGAAAAGAAAGA 59.082 34.615 0.00 0.00 0.00 2.52
3817 4041 6.144563 GGGCGAAAGAAAATGAGAAAAGAAAG 59.855 38.462 0.00 0.00 0.00 2.62
3818 4042 5.983118 GGGCGAAAGAAAATGAGAAAAGAAA 59.017 36.000 0.00 0.00 0.00 2.52
3819 4043 5.528870 GGGCGAAAGAAAATGAGAAAAGAA 58.471 37.500 0.00 0.00 0.00 2.52
3820 4044 4.320202 CGGGCGAAAGAAAATGAGAAAAGA 60.320 41.667 0.00 0.00 0.00 2.52
3821 4045 3.914364 CGGGCGAAAGAAAATGAGAAAAG 59.086 43.478 0.00 0.00 0.00 2.27
3822 4046 3.566322 TCGGGCGAAAGAAAATGAGAAAA 59.434 39.130 0.00 0.00 0.00 2.29
3823 4047 3.142951 TCGGGCGAAAGAAAATGAGAAA 58.857 40.909 0.00 0.00 0.00 2.52
3824 4048 2.773487 TCGGGCGAAAGAAAATGAGAA 58.227 42.857 0.00 0.00 0.00 2.87
3825 4049 2.465860 TCGGGCGAAAGAAAATGAGA 57.534 45.000 0.00 0.00 0.00 3.27
3826 4050 3.429085 CAATCGGGCGAAAGAAAATGAG 58.571 45.455 0.00 0.00 0.00 2.90
3827 4051 2.163412 CCAATCGGGCGAAAGAAAATGA 59.837 45.455 0.00 0.00 0.00 2.57
3828 4052 2.529151 CCAATCGGGCGAAAGAAAATG 58.471 47.619 0.00 0.00 0.00 2.32
3829 4053 2.939460 CCAATCGGGCGAAAGAAAAT 57.061 45.000 0.00 0.00 0.00 1.82
3849 4073 5.676837 GCAAGAAAATAAAAATGGGCATGGC 60.677 40.000 11.56 11.56 0.00 4.40
3850 4074 5.648960 AGCAAGAAAATAAAAATGGGCATGG 59.351 36.000 0.00 0.00 0.00 3.66
3851 4075 6.746745 AGCAAGAAAATAAAAATGGGCATG 57.253 33.333 0.00 0.00 0.00 4.06
3852 4076 8.102676 AGTTAGCAAGAAAATAAAAATGGGCAT 58.897 29.630 0.00 0.00 0.00 4.40
3853 4077 7.449247 AGTTAGCAAGAAAATAAAAATGGGCA 58.551 30.769 0.00 0.00 0.00 5.36
3854 4078 7.905604 AGTTAGCAAGAAAATAAAAATGGGC 57.094 32.000 0.00 0.00 0.00 5.36
3860 4084 9.921637 CCCAACATAGTTAGCAAGAAAATAAAA 57.078 29.630 0.00 0.00 0.00 1.52
3861 4085 8.032451 GCCCAACATAGTTAGCAAGAAAATAAA 58.968 33.333 0.00 0.00 0.00 1.40
3862 4086 7.396055 AGCCCAACATAGTTAGCAAGAAAATAA 59.604 33.333 6.79 0.00 0.00 1.40
3863 4087 6.889722 AGCCCAACATAGTTAGCAAGAAAATA 59.110 34.615 6.79 0.00 0.00 1.40
3864 4088 5.716703 AGCCCAACATAGTTAGCAAGAAAAT 59.283 36.000 6.79 0.00 0.00 1.82
3865 4089 5.048083 CAGCCCAACATAGTTAGCAAGAAAA 60.048 40.000 6.79 0.00 0.00 2.29
3866 4090 4.458989 CAGCCCAACATAGTTAGCAAGAAA 59.541 41.667 6.79 0.00 0.00 2.52
3867 4091 4.009675 CAGCCCAACATAGTTAGCAAGAA 58.990 43.478 6.79 0.00 0.00 2.52
3868 4092 3.009033 ACAGCCCAACATAGTTAGCAAGA 59.991 43.478 6.79 0.00 0.00 3.02
3869 4093 3.127548 CACAGCCCAACATAGTTAGCAAG 59.872 47.826 6.79 2.72 0.00 4.01
3870 4094 3.081061 CACAGCCCAACATAGTTAGCAA 58.919 45.455 6.79 0.00 0.00 3.91
3871 4095 2.617788 CCACAGCCCAACATAGTTAGCA 60.618 50.000 6.79 0.00 0.00 3.49
3872 4096 2.017049 CCACAGCCCAACATAGTTAGC 58.983 52.381 0.00 0.00 0.00 3.09
3873 4097 2.017049 GCCACAGCCCAACATAGTTAG 58.983 52.381 0.00 0.00 0.00 2.34
3874 4098 1.352687 TGCCACAGCCCAACATAGTTA 59.647 47.619 0.00 0.00 38.69 2.24
3875 4099 0.112218 TGCCACAGCCCAACATAGTT 59.888 50.000 0.00 0.00 38.69 2.24
3876 4100 0.112218 TTGCCACAGCCCAACATAGT 59.888 50.000 0.00 0.00 38.69 2.12
3877 4101 0.527565 GTTGCCACAGCCCAACATAG 59.472 55.000 0.00 0.00 40.66 2.23
3878 4102 0.897863 GGTTGCCACAGCCCAACATA 60.898 55.000 5.95 0.00 42.26 2.29
3879 4103 2.209315 GGTTGCCACAGCCCAACAT 61.209 57.895 5.95 0.00 42.26 2.71
3880 4104 2.837291 GGTTGCCACAGCCCAACA 60.837 61.111 5.95 0.00 42.26 3.33
3885 4109 3.070576 GGATGGGTTGCCACAGCC 61.071 66.667 0.00 0.00 38.69 4.85
3886 4110 3.070576 GGGATGGGTTGCCACAGC 61.071 66.667 0.00 0.00 35.48 4.40
3887 4111 1.379044 GAGGGATGGGTTGCCACAG 60.379 63.158 0.00 0.00 38.58 3.66
3888 4112 0.548926 TAGAGGGATGGGTTGCCACA 60.549 55.000 0.00 0.00 38.58 4.17
3889 4113 0.107165 GTAGAGGGATGGGTTGCCAC 60.107 60.000 0.00 0.00 38.58 5.01
3890 4114 1.279025 GGTAGAGGGATGGGTTGCCA 61.279 60.000 0.00 0.00 38.58 4.92
3891 4115 0.988678 AGGTAGAGGGATGGGTTGCC 60.989 60.000 0.00 0.00 35.67 4.52
3892 4116 2.621486 AGGTAGAGGGATGGGTTGC 58.379 57.895 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.