Multiple sequence alignment - TraesCS4A01G068700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G068700 chr4A 100.000 2791 0 0 1 2791 66934086 66936876 0.000000e+00 5155.0
1 TraesCS4A01G068700 chr4B 91.868 2029 109 25 41 2035 472236496 472238502 0.000000e+00 2782.0
2 TraesCS4A01G068700 chr4B 90.361 83 4 1 2090 2172 472265826 472265904 3.800000e-19 106.0
3 TraesCS4A01G068700 chr4B 89.286 56 6 0 2574 2629 111782094 111782039 1.390000e-08 71.3
4 TraesCS4A01G068700 chr4D 94.113 1274 47 12 905 2161 385727335 385728597 0.000000e+00 1912.0
5 TraesCS4A01G068700 chr4D 93.743 911 33 6 1 908 385726198 385727087 0.000000e+00 1345.0
6 TraesCS4A01G068700 chr4D 95.758 165 7 0 2627 2791 497886342 497886178 1.650000e-67 267.0
7 TraesCS4A01G068700 chr4D 96.250 160 4 1 2626 2785 5249198 5249355 7.670000e-66 261.0
8 TraesCS4A01G068700 chr1A 85.099 302 35 5 2263 2555 367879293 367878993 1.620000e-77 300.0
9 TraesCS4A01G068700 chr1A 85.053 281 34 5 2260 2534 30857972 30857694 2.120000e-71 279.0
10 TraesCS4A01G068700 chr2B 83.591 323 40 9 2238 2555 485437349 485437035 9.780000e-75 291.0
11 TraesCS4A01G068700 chrUn 85.338 266 34 3 2295 2555 96381125 96381390 1.270000e-68 270.0
12 TraesCS4A01G068700 chr5D 95.758 165 7 0 2627 2791 437450357 437450193 1.650000e-67 267.0
13 TraesCS4A01G068700 chr5D 81.847 314 49 8 2247 2555 398359048 398359358 9.920000e-65 257.0
14 TraesCS4A01G068700 chr1D 95.758 165 7 0 2627 2791 294747092 294746928 1.650000e-67 267.0
15 TraesCS4A01G068700 chr1D 95.758 165 5 1 2627 2791 75674563 75674401 5.930000e-67 265.0
16 TraesCS4A01G068700 chr1D 94.545 165 6 2 2627 2791 7699377 7699216 4.610000e-63 252.0
17 TraesCS4A01G068700 chr6D 96.835 158 3 2 2628 2785 418307060 418307215 2.130000e-66 263.0
18 TraesCS4A01G068700 chr6D 81.424 323 44 11 2246 2555 458534745 458535064 1.660000e-62 250.0
19 TraesCS4A01G068700 chr3D 82.298 322 40 15 2247 2555 404434188 404433871 2.130000e-66 263.0
20 TraesCS4A01G068700 chr5A 95.062 162 6 1 2627 2788 688934258 688934417 1.280000e-63 254.0
21 TraesCS4A01G068700 chr5A 80.938 320 46 11 2247 2555 457002489 457002174 3.590000e-59 239.0
22 TraesCS4A01G068700 chr5A 92.105 38 3 0 2570 2607 467388041 467388078 1.000000e-03 54.7
23 TraesCS4A01G068700 chr6A 95.597 159 2 2 2627 2785 176565593 176565746 1.660000e-62 250.0
24 TraesCS4A01G068700 chr3A 79.205 327 46 15 2246 2555 534197830 534198151 1.010000e-49 207.0
25 TraesCS4A01G068700 chr1B 97.368 38 1 0 2574 2611 12810756 12810793 6.450000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G068700 chr4A 66934086 66936876 2790 False 5155.0 5155 100.000 1 2791 1 chr4A.!!$F1 2790
1 TraesCS4A01G068700 chr4B 472236496 472238502 2006 False 2782.0 2782 91.868 41 2035 1 chr4B.!!$F1 1994
2 TraesCS4A01G068700 chr4D 385726198 385728597 2399 False 1628.5 1912 93.928 1 2161 2 chr4D.!!$F2 2160

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
868 899 0.036952 CAGTACCAGTCCCTGCTGTG 60.037 60.0 0.0 0.0 34.84 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2186 2500 0.029035 TTTTCAACGCGGCGCTAAAA 59.971 45.0 30.54 23.92 0.0 1.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.598019 TTTAGGGTAGTAGTTGGCGTG 57.402 47.619 0.00 0.00 0.00 5.34
31 32 1.477553 TAGGGTAGTAGTTGGCGTGG 58.522 55.000 0.00 0.00 0.00 4.94
33 34 1.547472 GGGTAGTAGTTGGCGTGGGT 61.547 60.000 0.00 0.00 0.00 4.51
34 35 0.108472 GGTAGTAGTTGGCGTGGGTC 60.108 60.000 0.00 0.00 0.00 4.46
35 36 0.893447 GTAGTAGTTGGCGTGGGTCT 59.107 55.000 0.00 0.00 0.00 3.85
36 37 1.274447 GTAGTAGTTGGCGTGGGTCTT 59.726 52.381 0.00 0.00 0.00 3.01
37 38 0.763035 AGTAGTTGGCGTGGGTCTTT 59.237 50.000 0.00 0.00 0.00 2.52
38 39 1.972795 AGTAGTTGGCGTGGGTCTTTA 59.027 47.619 0.00 0.00 0.00 1.85
39 40 2.071540 GTAGTTGGCGTGGGTCTTTAC 58.928 52.381 0.00 0.00 0.00 2.01
115 116 4.601621 TCGACTTCGAGTACATGAAGAG 57.398 45.455 25.12 19.28 44.22 2.85
120 121 6.189677 ACTTCGAGTACATGAAGAGAGAAG 57.810 41.667 25.12 9.46 43.34 2.85
121 122 5.941058 ACTTCGAGTACATGAAGAGAGAAGA 59.059 40.000 25.12 0.60 43.34 2.87
122 123 6.093495 ACTTCGAGTACATGAAGAGAGAAGAG 59.907 42.308 25.12 5.25 43.34 2.85
123 124 5.492895 TCGAGTACATGAAGAGAGAAGAGT 58.507 41.667 0.00 0.00 0.00 3.24
162 163 1.516386 CGTCTGCATAACGGCGACT 60.516 57.895 16.62 2.04 36.15 4.18
187 188 6.365518 TGTGAGCGTACGTTAAACATTCATTA 59.634 34.615 17.90 0.00 0.00 1.90
223 225 5.384063 AATAAACACCATTTGCACGATCA 57.616 34.783 0.00 0.00 0.00 2.92
224 226 3.940209 AAACACCATTTGCACGATCAT 57.060 38.095 0.00 0.00 0.00 2.45
225 227 6.691754 ATAAACACCATTTGCACGATCATA 57.308 33.333 0.00 0.00 0.00 2.15
226 228 5.384063 AAACACCATTTGCACGATCATAA 57.616 34.783 0.00 0.00 0.00 1.90
227 229 5.581126 AACACCATTTGCACGATCATAAT 57.419 34.783 0.00 0.00 0.00 1.28
228 230 5.581126 ACACCATTTGCACGATCATAATT 57.419 34.783 0.00 0.00 0.00 1.40
229 231 5.342433 ACACCATTTGCACGATCATAATTG 58.658 37.500 0.00 0.00 0.00 2.32
230 232 5.105797 ACACCATTTGCACGATCATAATTGT 60.106 36.000 0.00 0.00 0.00 2.71
231 233 5.806502 CACCATTTGCACGATCATAATTGTT 59.193 36.000 0.00 0.00 0.00 2.83
232 234 5.806502 ACCATTTGCACGATCATAATTGTTG 59.193 36.000 0.00 0.00 0.00 3.33
233 235 5.276489 CCATTTGCACGATCATAATTGTTGC 60.276 40.000 0.00 0.00 0.00 4.17
292 305 1.153429 AGAGGTACGCAATTCCGGC 60.153 57.895 0.00 0.00 0.00 6.13
379 393 4.126437 TGTCCTCATACATAAACCATGCG 58.874 43.478 0.00 0.00 38.29 4.73
482 496 6.147656 CCCCCTTCTGAAAATTTGAAATTTCG 59.852 38.462 15.43 8.20 38.16 3.46
584 599 2.336667 GGCATCCAAACAATTGAACGG 58.663 47.619 13.59 8.81 38.94 4.44
631 646 5.494863 TTTCACATATGATATCGCGTTCG 57.505 39.130 10.38 0.00 33.85 3.95
809 840 4.673534 GCCCATTGCTGAATTTTTCTTG 57.326 40.909 0.00 0.00 36.87 3.02
867 898 1.194781 CCAGTACCAGTCCCTGCTGT 61.195 60.000 0.00 0.00 34.84 4.40
868 899 0.036952 CAGTACCAGTCCCTGCTGTG 60.037 60.000 0.00 0.00 34.84 3.66
936 1218 0.896940 CCATGCACACCAGCCTCTTT 60.897 55.000 0.00 0.00 0.00 2.52
970 1256 6.726490 AACTCACCAGTGTTTCTTCTACTA 57.274 37.500 0.00 0.00 31.06 1.82
971 1257 6.334102 ACTCACCAGTGTTTCTTCTACTAG 57.666 41.667 0.00 0.00 0.00 2.57
972 1258 5.244178 ACTCACCAGTGTTTCTTCTACTAGG 59.756 44.000 0.00 0.00 0.00 3.02
973 1259 4.021368 TCACCAGTGTTTCTTCTACTAGGC 60.021 45.833 0.00 0.00 0.00 3.93
1005 1292 1.285962 CAGGGTTCTTCCATCATGGGT 59.714 52.381 3.05 0.00 38.32 4.51
1006 1293 2.003072 AGGGTTCTTCCATCATGGGTT 58.997 47.619 3.05 0.00 38.32 4.11
1116 1404 0.322816 TCAAGTGCCTGGATTGCTCC 60.323 55.000 0.00 0.00 42.45 4.70
1158 1446 0.676782 ATGCCCTCAAAGGTACGTGC 60.677 55.000 0.00 0.00 31.93 5.34
1177 1465 1.792949 GCCATCGCTCCTATACGTTTG 59.207 52.381 0.00 0.00 0.00 2.93
1235 1530 1.751927 CCCATCAAGTGCAGGGCTC 60.752 63.158 0.00 0.00 33.91 4.70
1463 1758 1.536676 CAAGTCCACCACCCAAGGT 59.463 57.895 0.00 0.00 44.48 3.50
1551 1846 2.664151 GCGTGCAAGAAGAAGAAGAAGC 60.664 50.000 2.99 0.00 0.00 3.86
1607 1902 2.838225 CCGGAGCCCTCATACGGT 60.838 66.667 0.00 0.00 39.70 4.83
1608 1903 1.529948 CCGGAGCCCTCATACGGTA 60.530 63.158 0.00 0.00 39.70 4.02
1611 1906 1.470165 GGAGCCCTCATACGGTACCC 61.470 65.000 6.25 0.00 0.00 3.69
1612 1907 1.458967 AGCCCTCATACGGTACCCC 60.459 63.158 6.25 0.00 0.00 4.95
1838 2139 2.758089 GCTCGCTCACTTGCCCATG 61.758 63.158 0.00 0.00 0.00 3.66
1858 2162 1.340017 GGAGTGGCATTACAGCAAGGA 60.340 52.381 0.00 0.00 35.83 3.36
1866 2170 0.320421 TTACAGCAAGGAGGCGTCAC 60.320 55.000 8.91 0.00 39.27 3.67
1928 2238 4.097589 TGTTGATTCAGTTGTCATGTTGCA 59.902 37.500 0.00 0.00 0.00 4.08
2020 2332 8.632679 TGGAATAAAGAAAATGGTATCATCTGC 58.367 33.333 0.00 0.00 32.24 4.26
2081 2393 3.758300 CATTTGCGAACTGGTGGTTATC 58.242 45.455 0.00 0.00 38.41 1.75
2097 2409 4.134563 GGTTATCGGACGGGTAGTACTTA 58.865 47.826 0.00 0.00 0.00 2.24
2098 2410 4.214332 GGTTATCGGACGGGTAGTACTTAG 59.786 50.000 0.00 0.00 0.00 2.18
2100 2412 2.632377 TCGGACGGGTAGTACTTAGTG 58.368 52.381 0.00 0.00 0.00 2.74
2129 2443 4.491676 TCTTGTTGGCATTACGTAGAGTC 58.508 43.478 0.00 0.00 0.00 3.36
2155 2469 7.346751 AGCATCCAGAAAAGAAAAGTAAACA 57.653 32.000 0.00 0.00 0.00 2.83
2161 2475 7.282450 TCCAGAAAAGAAAAGTAAACAGAGGAC 59.718 37.037 0.00 0.00 0.00 3.85
2162 2476 7.283354 CCAGAAAAGAAAAGTAAACAGAGGACT 59.717 37.037 0.00 0.00 0.00 3.85
2163 2477 8.678199 CAGAAAAGAAAAGTAAACAGAGGACTT 58.322 33.333 0.00 0.00 34.92 3.01
2164 2478 9.244292 AGAAAAGAAAAGTAAACAGAGGACTTT 57.756 29.630 0.00 0.00 43.49 2.66
2173 2487 9.438228 AAGTAAACAGAGGACTTTTCTTATAGC 57.562 33.333 0.00 0.00 29.02 2.97
2174 2488 8.594550 AGTAAACAGAGGACTTTTCTTATAGCA 58.405 33.333 0.00 0.00 0.00 3.49
2175 2489 9.384764 GTAAACAGAGGACTTTTCTTATAGCAT 57.615 33.333 0.00 0.00 0.00 3.79
2177 2491 9.606631 AAACAGAGGACTTTTCTTATAGCATAG 57.393 33.333 0.00 0.00 0.00 2.23
2178 2492 7.731054 ACAGAGGACTTTTCTTATAGCATAGG 58.269 38.462 0.00 0.00 0.00 2.57
2179 2493 7.345914 ACAGAGGACTTTTCTTATAGCATAGGT 59.654 37.037 0.00 0.00 0.00 3.08
2180 2494 7.655328 CAGAGGACTTTTCTTATAGCATAGGTG 59.345 40.741 0.00 0.00 0.00 4.00
2191 2505 2.300623 GCATAGGTGCGCGATTTTAG 57.699 50.000 12.10 0.00 42.28 1.85
2192 2506 1.660333 GCATAGGTGCGCGATTTTAGC 60.660 52.381 12.10 0.36 42.28 3.09
2200 2514 2.398036 CGATTTTAGCGCCGCGTT 59.602 55.556 15.34 11.43 0.00 4.84
2201 2515 1.927827 CGATTTTAGCGCCGCGTTG 60.928 57.895 15.34 0.00 0.00 4.10
2202 2516 1.422269 GATTTTAGCGCCGCGTTGA 59.578 52.632 15.34 1.61 0.00 3.18
2203 2517 0.179210 GATTTTAGCGCCGCGTTGAA 60.179 50.000 15.34 8.78 0.00 2.69
2204 2518 0.238817 ATTTTAGCGCCGCGTTGAAA 59.761 45.000 18.94 18.94 31.70 2.69
2205 2519 0.029035 TTTTAGCGCCGCGTTGAAAA 59.971 45.000 15.38 14.51 0.00 2.29
2206 2520 0.029035 TTTAGCGCCGCGTTGAAAAA 59.971 45.000 15.34 3.32 0.00 1.94
2231 2545 3.522731 TTTTTGCACGCGCCCAGT 61.523 55.556 5.73 0.00 37.32 4.00
2232 2546 3.477224 TTTTTGCACGCGCCCAGTC 62.477 57.895 5.73 0.00 37.32 3.51
2253 2567 3.177605 GGAACGGACACACAAATAACG 57.822 47.619 0.00 0.00 0.00 3.18
2254 2568 2.567067 GAACGGACACACAAATAACGC 58.433 47.619 0.00 0.00 0.00 4.84
2255 2569 0.509499 ACGGACACACAAATAACGCG 59.491 50.000 3.53 3.53 0.00 6.01
2256 2570 0.509499 CGGACACACAAATAACGCGT 59.491 50.000 5.58 5.58 0.00 6.01
2257 2571 1.720233 CGGACACACAAATAACGCGTG 60.720 52.381 14.98 1.26 36.70 5.34
2258 2572 1.314581 GACACACAAATAACGCGTGC 58.685 50.000 14.98 0.00 33.89 5.34
2259 2573 0.383737 ACACACAAATAACGCGTGCG 60.384 50.000 14.98 13.39 46.03 5.34
2269 2583 4.082192 CGCGTGCGTGGTATAGTT 57.918 55.556 6.00 0.00 34.35 2.24
2270 2584 1.628983 CGCGTGCGTGGTATAGTTG 59.371 57.895 6.00 0.00 34.35 3.16
2271 2585 1.748647 CGCGTGCGTGGTATAGTTGG 61.749 60.000 6.00 0.00 34.35 3.77
2272 2586 0.738412 GCGTGCGTGGTATAGTTGGT 60.738 55.000 0.00 0.00 0.00 3.67
2273 2587 1.717194 CGTGCGTGGTATAGTTGGTT 58.283 50.000 0.00 0.00 0.00 3.67
2274 2588 1.657094 CGTGCGTGGTATAGTTGGTTC 59.343 52.381 0.00 0.00 0.00 3.62
2275 2589 2.690786 GTGCGTGGTATAGTTGGTTCA 58.309 47.619 0.00 0.00 0.00 3.18
2276 2590 2.671396 GTGCGTGGTATAGTTGGTTCAG 59.329 50.000 0.00 0.00 0.00 3.02
2277 2591 1.664151 GCGTGGTATAGTTGGTTCAGC 59.336 52.381 0.00 0.00 0.00 4.26
2278 2592 1.924524 CGTGGTATAGTTGGTTCAGCG 59.075 52.381 0.00 0.00 0.00 5.18
2279 2593 2.673043 CGTGGTATAGTTGGTTCAGCGT 60.673 50.000 0.00 0.00 0.00 5.07
2280 2594 2.671396 GTGGTATAGTTGGTTCAGCGTG 59.329 50.000 0.00 0.00 0.00 5.34
2281 2595 1.664151 GGTATAGTTGGTTCAGCGTGC 59.336 52.381 0.00 0.00 0.00 5.34
2282 2596 1.323534 GTATAGTTGGTTCAGCGTGCG 59.676 52.381 0.00 0.00 0.00 5.34
2283 2597 1.019278 ATAGTTGGTTCAGCGTGCGG 61.019 55.000 0.00 0.00 0.00 5.69
2284 2598 2.089887 TAGTTGGTTCAGCGTGCGGA 62.090 55.000 0.00 0.00 0.00 5.54
2285 2599 2.664851 TTGGTTCAGCGTGCGGAG 60.665 61.111 0.00 0.00 0.00 4.63
2299 2613 1.225745 CGGAGCAAAACGACATCGC 60.226 57.895 0.14 0.00 44.43 4.58
2300 2614 1.225745 GGAGCAAAACGACATCGCG 60.226 57.895 0.00 0.00 44.43 5.87
2301 2615 1.859135 GAGCAAAACGACATCGCGC 60.859 57.895 0.00 0.00 44.43 6.86
2302 2616 3.223688 GCAAAACGACATCGCGCG 61.224 61.111 26.76 26.76 44.43 6.86
2303 2617 3.223688 CAAAACGACATCGCGCGC 61.224 61.111 27.95 23.91 44.43 6.86
2304 2618 4.439472 AAAACGACATCGCGCGCC 62.439 61.111 27.95 10.18 44.43 6.53
2316 2630 2.349648 CGCGCCGCTTATTTCGTG 60.350 61.111 7.78 0.00 0.00 4.35
2317 2631 2.647791 GCGCCGCTTATTTCGTGC 60.648 61.111 0.00 0.00 0.00 5.34
2321 2635 2.022762 CGCTTATTTCGTGCGCCC 59.977 61.111 4.18 0.00 43.08 6.13
2322 2636 2.022762 GCTTATTTCGTGCGCCCG 59.977 61.111 5.73 5.73 0.00 6.13
2323 2637 2.022762 CTTATTTCGTGCGCCCGC 59.977 61.111 7.61 5.60 42.35 6.13
2324 2638 3.449095 CTTATTTCGTGCGCCCGCC 62.449 63.158 7.61 0.92 41.09 6.13
2344 2658 3.887327 CGCGCGCTAGACAACGAC 61.887 66.667 30.48 0.00 0.00 4.34
2345 2659 3.887327 GCGCGCTAGACAACGACG 61.887 66.667 26.67 0.00 33.93 5.12
2346 2660 2.202260 CGCGCTAGACAACGACGA 60.202 61.111 5.56 0.00 33.06 4.20
2347 2661 2.486322 CGCGCTAGACAACGACGAC 61.486 63.158 5.56 0.00 33.06 4.34
2348 2662 1.154263 GCGCTAGACAACGACGACT 60.154 57.895 0.00 0.00 0.00 4.18
2349 2663 1.126996 GCGCTAGACAACGACGACTC 61.127 60.000 0.00 0.00 0.00 3.36
2350 2664 0.852412 CGCTAGACAACGACGACTCG 60.852 60.000 0.00 0.00 46.06 4.18
2351 2665 1.126996 GCTAGACAACGACGACTCGC 61.127 60.000 0.00 0.00 44.33 5.03
2352 2666 0.852412 CTAGACAACGACGACTCGCG 60.852 60.000 0.00 0.00 44.33 5.87
2353 2667 2.823119 TAGACAACGACGACTCGCGC 62.823 60.000 0.00 0.00 44.33 6.86
2361 2675 4.470050 CGACTCGCGCGCAACTTC 62.470 66.667 32.61 19.14 0.00 3.01
2362 2676 4.135493 GACTCGCGCGCAACTTCC 62.135 66.667 32.61 10.62 0.00 3.46
2363 2677 4.961511 ACTCGCGCGCAACTTCCA 62.962 61.111 32.61 3.74 0.00 3.53
2364 2678 4.430423 CTCGCGCGCAACTTCCAC 62.430 66.667 32.61 0.00 0.00 4.02
2367 2681 3.959975 GCGCGCAACTTCCACCAA 61.960 61.111 29.10 0.00 0.00 3.67
2368 2682 2.051345 CGCGCAACTTCCACCAAC 60.051 61.111 8.75 0.00 0.00 3.77
2369 2683 2.335011 GCGCAACTTCCACCAACC 59.665 61.111 0.30 0.00 0.00 3.77
2370 2684 2.637025 CGCAACTTCCACCAACCG 59.363 61.111 0.00 0.00 0.00 4.44
2371 2685 2.335011 GCAACTTCCACCAACCGC 59.665 61.111 0.00 0.00 0.00 5.68
2372 2686 3.039134 CAACTTCCACCAACCGCC 58.961 61.111 0.00 0.00 0.00 6.13
2373 2687 1.826054 CAACTTCCACCAACCGCCA 60.826 57.895 0.00 0.00 0.00 5.69
2374 2688 1.528309 AACTTCCACCAACCGCCAG 60.528 57.895 0.00 0.00 0.00 4.85
2375 2689 1.990160 AACTTCCACCAACCGCCAGA 61.990 55.000 0.00 0.00 0.00 3.86
2376 2690 1.002134 CTTCCACCAACCGCCAGAT 60.002 57.895 0.00 0.00 0.00 2.90
2377 2691 1.002624 TTCCACCAACCGCCAGATC 60.003 57.895 0.00 0.00 0.00 2.75
2378 2692 2.438434 CCACCAACCGCCAGATCC 60.438 66.667 0.00 0.00 0.00 3.36
2379 2693 2.350895 CACCAACCGCCAGATCCA 59.649 61.111 0.00 0.00 0.00 3.41
2380 2694 1.303236 CACCAACCGCCAGATCCAA 60.303 57.895 0.00 0.00 0.00 3.53
2381 2695 1.002134 ACCAACCGCCAGATCCAAG 60.002 57.895 0.00 0.00 0.00 3.61
2382 2696 2.409870 CCAACCGCCAGATCCAAGC 61.410 63.158 0.00 0.00 0.00 4.01
2405 2719 4.473520 CGCTCGCACCTCCCCATT 62.474 66.667 0.00 0.00 0.00 3.16
2406 2720 2.044946 GCTCGCACCTCCCCATTT 60.045 61.111 0.00 0.00 0.00 2.32
2407 2721 2.409870 GCTCGCACCTCCCCATTTG 61.410 63.158 0.00 0.00 0.00 2.32
2408 2722 2.361104 TCGCACCTCCCCATTTGC 60.361 61.111 0.00 0.00 0.00 3.68
2409 2723 2.361610 CGCACCTCCCCATTTGCT 60.362 61.111 0.00 0.00 32.56 3.91
2410 2724 2.409870 CGCACCTCCCCATTTGCTC 61.410 63.158 0.00 0.00 32.56 4.26
2411 2725 2.054453 GCACCTCCCCATTTGCTCC 61.054 63.158 0.00 0.00 32.00 4.70
2412 2726 1.750399 CACCTCCCCATTTGCTCCG 60.750 63.158 0.00 0.00 0.00 4.63
2413 2727 2.124151 CCTCCCCATTTGCTCCGG 60.124 66.667 0.00 0.00 0.00 5.14
2414 2728 2.830370 CTCCCCATTTGCTCCGGC 60.830 66.667 0.00 0.00 39.26 6.13
2415 2729 4.794648 TCCCCATTTGCTCCGGCG 62.795 66.667 0.00 0.00 42.25 6.46
2416 2730 4.794648 CCCCATTTGCTCCGGCGA 62.795 66.667 9.30 0.00 42.25 5.54
2417 2731 3.508840 CCCATTTGCTCCGGCGAC 61.509 66.667 9.30 0.00 42.25 5.19
2418 2732 3.508840 CCATTTGCTCCGGCGACC 61.509 66.667 9.30 0.00 42.25 4.79
2419 2733 3.508840 CATTTGCTCCGGCGACCC 61.509 66.667 9.30 0.00 42.25 4.46
2441 2755 4.990553 GCGCTTCCCCGGCCTATC 62.991 72.222 0.00 0.00 0.00 2.08
2442 2756 4.315941 CGCTTCCCCGGCCTATCC 62.316 72.222 0.00 0.00 0.00 2.59
2443 2757 2.849646 GCTTCCCCGGCCTATCCT 60.850 66.667 0.00 0.00 0.00 3.24
2444 2758 2.884980 GCTTCCCCGGCCTATCCTC 61.885 68.421 0.00 0.00 0.00 3.71
2445 2759 2.523412 TTCCCCGGCCTATCCTCG 60.523 66.667 0.00 0.00 0.00 4.63
2446 2760 3.384555 TTCCCCGGCCTATCCTCGT 62.385 63.158 0.00 0.00 0.00 4.18
2447 2761 3.616721 CCCCGGCCTATCCTCGTG 61.617 72.222 0.00 0.00 0.00 4.35
2448 2762 4.301027 CCCGGCCTATCCTCGTGC 62.301 72.222 0.00 0.00 0.00 5.34
2449 2763 3.536917 CCGGCCTATCCTCGTGCA 61.537 66.667 0.00 0.00 0.00 4.57
2450 2764 2.279517 CGGCCTATCCTCGTGCAC 60.280 66.667 6.82 6.82 0.00 4.57
2451 2765 2.109181 GGCCTATCCTCGTGCACC 59.891 66.667 12.15 0.00 0.00 5.01
2452 2766 2.279517 GCCTATCCTCGTGCACCG 60.280 66.667 12.15 6.81 38.13 4.94
2453 2767 2.279517 CCTATCCTCGTGCACCGC 60.280 66.667 12.15 0.00 36.19 5.68
2454 2768 2.786495 CCTATCCTCGTGCACCGCT 61.786 63.158 12.15 0.00 36.19 5.52
2455 2769 1.589993 CTATCCTCGTGCACCGCTG 60.590 63.158 12.15 0.00 36.19 5.18
2456 2770 2.284798 CTATCCTCGTGCACCGCTGT 62.285 60.000 12.15 0.00 36.19 4.40
2457 2771 1.884075 TATCCTCGTGCACCGCTGTT 61.884 55.000 12.15 0.00 36.19 3.16
2458 2772 3.716006 CCTCGTGCACCGCTGTTG 61.716 66.667 12.15 0.00 36.19 3.33
2459 2773 4.374702 CTCGTGCACCGCTGTTGC 62.375 66.667 12.15 0.00 36.19 4.17
2460 2774 4.908687 TCGTGCACCGCTGTTGCT 62.909 61.111 12.15 0.00 36.97 3.91
2461 2775 3.952675 CGTGCACCGCTGTTGCTT 61.953 61.111 12.15 0.00 36.97 3.91
2462 2776 2.050985 GTGCACCGCTGTTGCTTC 60.051 61.111 5.22 0.00 36.97 3.86
2463 2777 3.286751 TGCACCGCTGTTGCTTCC 61.287 61.111 3.18 0.00 36.97 3.46
2464 2778 2.980233 GCACCGCTGTTGCTTCCT 60.980 61.111 0.00 0.00 36.97 3.36
2465 2779 2.970974 GCACCGCTGTTGCTTCCTC 61.971 63.158 0.00 0.00 36.97 3.71
2466 2780 2.032681 ACCGCTGTTGCTTCCTCC 59.967 61.111 0.00 0.00 36.97 4.30
2467 2781 2.032528 CCGCTGTTGCTTCCTCCA 59.967 61.111 0.00 0.00 36.97 3.86
2468 2782 2.328099 CCGCTGTTGCTTCCTCCAC 61.328 63.158 0.00 0.00 36.97 4.02
2469 2783 2.328099 CGCTGTTGCTTCCTCCACC 61.328 63.158 0.00 0.00 36.97 4.61
2470 2784 1.073897 GCTGTTGCTTCCTCCACCT 59.926 57.895 0.00 0.00 36.03 4.00
2471 2785 0.957888 GCTGTTGCTTCCTCCACCTC 60.958 60.000 0.00 0.00 36.03 3.85
2472 2786 0.689623 CTGTTGCTTCCTCCACCTCT 59.310 55.000 0.00 0.00 0.00 3.69
2473 2787 0.687354 TGTTGCTTCCTCCACCTCTC 59.313 55.000 0.00 0.00 0.00 3.20
2474 2788 0.687354 GTTGCTTCCTCCACCTCTCA 59.313 55.000 0.00 0.00 0.00 3.27
2475 2789 0.687354 TTGCTTCCTCCACCTCTCAC 59.313 55.000 0.00 0.00 0.00 3.51
2476 2790 1.194781 TGCTTCCTCCACCTCTCACC 61.195 60.000 0.00 0.00 0.00 4.02
2477 2791 1.893786 CTTCCTCCACCTCTCACCG 59.106 63.158 0.00 0.00 0.00 4.94
2478 2792 2.232298 CTTCCTCCACCTCTCACCGC 62.232 65.000 0.00 0.00 0.00 5.68
2479 2793 3.775654 CCTCCACCTCTCACCGCC 61.776 72.222 0.00 0.00 0.00 6.13
2480 2794 2.997315 CTCCACCTCTCACCGCCA 60.997 66.667 0.00 0.00 0.00 5.69
2481 2795 3.302347 CTCCACCTCTCACCGCCAC 62.302 68.421 0.00 0.00 0.00 5.01
2482 2796 4.394712 CCACCTCTCACCGCCACC 62.395 72.222 0.00 0.00 0.00 4.61
2483 2797 4.742201 CACCTCTCACCGCCACCG 62.742 72.222 0.00 0.00 0.00 4.94
2500 2814 4.587189 GCCCCTCGAACGCGCTAT 62.587 66.667 5.73 0.00 37.46 2.97
2501 2815 2.106332 CCCCTCGAACGCGCTATT 59.894 61.111 5.73 0.00 37.46 1.73
2502 2816 1.949631 CCCCTCGAACGCGCTATTC 60.950 63.158 5.73 8.56 37.46 1.75
2503 2817 1.949631 CCCTCGAACGCGCTATTCC 60.950 63.158 5.73 0.00 37.46 3.01
2504 2818 1.065928 CCTCGAACGCGCTATTCCT 59.934 57.895 5.73 0.00 37.46 3.36
2505 2819 0.935366 CCTCGAACGCGCTATTCCTC 60.935 60.000 5.73 0.00 37.46 3.71
2506 2820 0.935366 CTCGAACGCGCTATTCCTCC 60.935 60.000 5.73 0.00 37.46 4.30
2507 2821 2.293627 CGAACGCGCTATTCCTCCG 61.294 63.158 5.73 0.00 0.00 4.63
2508 2822 1.065273 GAACGCGCTATTCCTCCGA 59.935 57.895 5.73 0.00 0.00 4.55
2509 2823 1.207377 GAACGCGCTATTCCTCCGAC 61.207 60.000 5.73 0.00 0.00 4.79
2510 2824 2.726180 CGCGCTATTCCTCCGACG 60.726 66.667 5.56 0.00 0.00 5.12
2511 2825 2.719979 GCGCTATTCCTCCGACGA 59.280 61.111 0.00 0.00 0.00 4.20
2512 2826 1.065273 GCGCTATTCCTCCGACGAA 59.935 57.895 0.00 0.00 0.00 3.85
2513 2827 0.318784 GCGCTATTCCTCCGACGAAT 60.319 55.000 0.00 0.00 34.40 3.34
2514 2828 1.068748 GCGCTATTCCTCCGACGAATA 60.069 52.381 0.00 0.00 32.32 1.75
2515 2829 2.852748 CGCTATTCCTCCGACGAATAG 58.147 52.381 16.76 16.76 46.37 1.73
2517 2831 2.852748 CTATTCCTCCGACGAATAGCG 58.147 52.381 11.76 0.00 41.17 4.26
2518 2832 0.318784 ATTCCTCCGACGAATAGCGC 60.319 55.000 0.00 0.00 46.04 5.92
2519 2833 2.345880 TTCCTCCGACGAATAGCGCC 62.346 60.000 2.29 0.00 46.04 6.53
2520 2834 2.354773 CTCCGACGAATAGCGCCC 60.355 66.667 2.29 0.00 46.04 6.13
2521 2835 4.260355 TCCGACGAATAGCGCCCG 62.260 66.667 2.29 5.59 46.04 6.13
2562 2876 3.981308 CGCAAGGTGTCCCGAATT 58.019 55.556 0.00 0.00 35.12 2.17
2563 2877 3.146783 CGCAAGGTGTCCCGAATTA 57.853 52.632 0.00 0.00 35.12 1.40
2564 2878 0.725117 CGCAAGGTGTCCCGAATTAC 59.275 55.000 0.00 0.00 35.12 1.89
2565 2879 1.674817 CGCAAGGTGTCCCGAATTACT 60.675 52.381 0.00 0.00 35.12 2.24
2566 2880 2.433436 GCAAGGTGTCCCGAATTACTT 58.567 47.619 0.00 0.00 35.12 2.24
2567 2881 2.161609 GCAAGGTGTCCCGAATTACTTG 59.838 50.000 0.00 0.00 37.48 3.16
2568 2882 3.408634 CAAGGTGTCCCGAATTACTTGT 58.591 45.455 0.00 0.00 35.12 3.16
2569 2883 3.329929 AGGTGTCCCGAATTACTTGTC 57.670 47.619 0.00 0.00 35.12 3.18
2570 2884 2.635915 AGGTGTCCCGAATTACTTGTCA 59.364 45.455 0.00 0.00 35.12 3.58
2571 2885 2.740447 GGTGTCCCGAATTACTTGTCAC 59.260 50.000 0.00 0.00 0.00 3.67
2572 2886 3.395639 GTGTCCCGAATTACTTGTCACA 58.604 45.455 0.00 0.00 0.00 3.58
2573 2887 3.810941 GTGTCCCGAATTACTTGTCACAA 59.189 43.478 0.00 0.00 0.00 3.33
2574 2888 4.273969 GTGTCCCGAATTACTTGTCACAAA 59.726 41.667 0.00 0.00 0.00 2.83
2575 2889 4.882427 TGTCCCGAATTACTTGTCACAAAA 59.118 37.500 0.00 0.00 0.00 2.44
2576 2890 5.357314 TGTCCCGAATTACTTGTCACAAAAA 59.643 36.000 0.00 0.00 0.00 1.94
2577 2891 6.039941 TGTCCCGAATTACTTGTCACAAAAAT 59.960 34.615 0.00 0.00 0.00 1.82
2578 2892 7.228906 TGTCCCGAATTACTTGTCACAAAAATA 59.771 33.333 0.00 0.00 0.00 1.40
2579 2893 7.536281 GTCCCGAATTACTTGTCACAAAAATAC 59.464 37.037 0.00 0.00 0.00 1.89
2580 2894 6.521821 CCCGAATTACTTGTCACAAAAATACG 59.478 38.462 0.00 0.00 0.00 3.06
2581 2895 7.073265 CCGAATTACTTGTCACAAAAATACGT 58.927 34.615 0.00 0.00 0.00 3.57
2582 2896 7.267600 CCGAATTACTTGTCACAAAAATACGTC 59.732 37.037 0.00 0.00 0.00 4.34
2583 2897 8.007716 CGAATTACTTGTCACAAAAATACGTCT 58.992 33.333 0.00 0.00 0.00 4.18
2586 2900 9.701098 ATTACTTGTCACAAAAATACGTCTAGA 57.299 29.630 0.00 0.00 0.00 2.43
2587 2901 9.701098 TTACTTGTCACAAAAATACGTCTAGAT 57.299 29.630 0.00 0.00 0.00 1.98
2589 2903 9.136952 ACTTGTCACAAAAATACGTCTAGATAC 57.863 33.333 0.00 0.00 0.00 2.24
2590 2904 9.135843 CTTGTCACAAAAATACGTCTAGATACA 57.864 33.333 0.00 0.00 0.00 2.29
2591 2905 9.647797 TTGTCACAAAAATACGTCTAGATACAT 57.352 29.630 0.00 0.00 0.00 2.29
2592 2906 9.297586 TGTCACAAAAATACGTCTAGATACATC 57.702 33.333 0.00 0.00 0.00 3.06
2593 2907 8.753175 GTCACAAAAATACGTCTAGATACATCC 58.247 37.037 0.00 0.00 0.00 3.51
2594 2908 8.471609 TCACAAAAATACGTCTAGATACATCCA 58.528 33.333 0.00 0.00 0.00 3.41
2595 2909 9.261180 CACAAAAATACGTCTAGATACATCCAT 57.739 33.333 0.00 0.00 0.00 3.41
2596 2910 9.832445 ACAAAAATACGTCTAGATACATCCATT 57.168 29.630 0.00 0.00 0.00 3.16
2600 2914 9.645059 AAATACGTCTAGATACATCCATTCATG 57.355 33.333 0.00 0.00 0.00 3.07
2601 2915 5.473931 ACGTCTAGATACATCCATTCATGC 58.526 41.667 0.00 0.00 0.00 4.06
2602 2916 4.560427 CGTCTAGATACATCCATTCATGCG 59.440 45.833 0.00 0.00 0.00 4.73
2603 2917 5.619981 CGTCTAGATACATCCATTCATGCGA 60.620 44.000 0.00 0.00 0.00 5.10
2604 2918 5.574830 GTCTAGATACATCCATTCATGCGAC 59.425 44.000 0.00 0.00 0.00 5.19
2605 2919 4.341366 AGATACATCCATTCATGCGACA 57.659 40.909 0.00 0.00 0.00 4.35
2606 2920 4.707105 AGATACATCCATTCATGCGACAA 58.293 39.130 0.00 0.00 0.00 3.18
2607 2921 4.753610 AGATACATCCATTCATGCGACAAG 59.246 41.667 0.00 0.00 0.00 3.16
2608 2922 2.715046 ACATCCATTCATGCGACAAGT 58.285 42.857 0.00 0.00 0.00 3.16
2609 2923 3.872696 ACATCCATTCATGCGACAAGTA 58.127 40.909 0.00 0.00 0.00 2.24
2610 2924 4.260985 ACATCCATTCATGCGACAAGTAA 58.739 39.130 0.00 0.00 0.00 2.24
2611 2925 4.883585 ACATCCATTCATGCGACAAGTAAT 59.116 37.500 0.00 0.00 0.00 1.89
2612 2926 5.008019 ACATCCATTCATGCGACAAGTAATC 59.992 40.000 0.00 0.00 0.00 1.75
2613 2927 3.876914 TCCATTCATGCGACAAGTAATCC 59.123 43.478 0.00 0.00 0.00 3.01
2614 2928 3.003689 CCATTCATGCGACAAGTAATCCC 59.996 47.826 0.00 0.00 0.00 3.85
2615 2929 1.934589 TCATGCGACAAGTAATCCCG 58.065 50.000 0.00 0.00 0.00 5.14
2616 2930 0.937304 CATGCGACAAGTAATCCCGG 59.063 55.000 0.00 0.00 0.00 5.73
2617 2931 0.828022 ATGCGACAAGTAATCCCGGA 59.172 50.000 0.73 0.00 0.00 5.14
2618 2932 0.108520 TGCGACAAGTAATCCCGGAC 60.109 55.000 0.73 0.00 0.00 4.79
2619 2933 0.108520 GCGACAAGTAATCCCGGACA 60.109 55.000 0.73 0.00 0.00 4.02
2620 2934 1.922570 CGACAAGTAATCCCGGACAG 58.077 55.000 0.73 0.00 0.00 3.51
2621 2935 1.475280 CGACAAGTAATCCCGGACAGA 59.525 52.381 0.73 0.00 0.00 3.41
2622 2936 2.479730 CGACAAGTAATCCCGGACAGAG 60.480 54.545 0.73 0.00 0.00 3.35
2623 2937 1.831736 ACAAGTAATCCCGGACAGAGG 59.168 52.381 0.73 0.00 0.00 3.69
2631 2945 3.831651 CCGGACAGAGGGAGTAGAT 57.168 57.895 0.00 0.00 0.00 1.98
2632 2946 1.323412 CCGGACAGAGGGAGTAGATG 58.677 60.000 0.00 0.00 0.00 2.90
2633 2947 1.133761 CCGGACAGAGGGAGTAGATGA 60.134 57.143 0.00 0.00 0.00 2.92
2634 2948 2.656002 CGGACAGAGGGAGTAGATGAA 58.344 52.381 0.00 0.00 0.00 2.57
2635 2949 3.226777 CGGACAGAGGGAGTAGATGAAT 58.773 50.000 0.00 0.00 0.00 2.57
2636 2950 3.639094 CGGACAGAGGGAGTAGATGAATT 59.361 47.826 0.00 0.00 0.00 2.17
2637 2951 4.100189 CGGACAGAGGGAGTAGATGAATTT 59.900 45.833 0.00 0.00 0.00 1.82
2638 2952 5.363939 GGACAGAGGGAGTAGATGAATTTG 58.636 45.833 0.00 0.00 0.00 2.32
2639 2953 5.363939 GACAGAGGGAGTAGATGAATTTGG 58.636 45.833 0.00 0.00 0.00 3.28
2640 2954 4.785376 ACAGAGGGAGTAGATGAATTTGGT 59.215 41.667 0.00 0.00 0.00 3.67
2641 2955 5.121811 CAGAGGGAGTAGATGAATTTGGTG 58.878 45.833 0.00 0.00 0.00 4.17
2642 2956 3.879892 GAGGGAGTAGATGAATTTGGTGC 59.120 47.826 0.00 0.00 0.00 5.01
2643 2957 3.266772 AGGGAGTAGATGAATTTGGTGCA 59.733 43.478 0.00 0.00 0.00 4.57
2644 2958 4.079558 AGGGAGTAGATGAATTTGGTGCAT 60.080 41.667 0.00 0.00 0.00 3.96
2645 2959 4.037208 GGGAGTAGATGAATTTGGTGCATG 59.963 45.833 0.00 0.00 0.00 4.06
2646 2960 4.641989 GGAGTAGATGAATTTGGTGCATGT 59.358 41.667 0.00 0.00 0.00 3.21
2647 2961 5.126061 GGAGTAGATGAATTTGGTGCATGTT 59.874 40.000 0.00 0.00 0.00 2.71
2648 2962 5.957798 AGTAGATGAATTTGGTGCATGTTG 58.042 37.500 0.00 0.00 0.00 3.33
2649 2963 4.877378 AGATGAATTTGGTGCATGTTGT 57.123 36.364 0.00 0.00 0.00 3.32
2650 2964 5.217978 AGATGAATTTGGTGCATGTTGTT 57.782 34.783 0.00 0.00 0.00 2.83
2651 2965 5.613329 AGATGAATTTGGTGCATGTTGTTT 58.387 33.333 0.00 0.00 0.00 2.83
2652 2966 5.467399 AGATGAATTTGGTGCATGTTGTTTG 59.533 36.000 0.00 0.00 0.00 2.93
2653 2967 4.511527 TGAATTTGGTGCATGTTGTTTGT 58.488 34.783 0.00 0.00 0.00 2.83
2654 2968 5.664457 TGAATTTGGTGCATGTTGTTTGTA 58.336 33.333 0.00 0.00 0.00 2.41
2655 2969 5.752472 TGAATTTGGTGCATGTTGTTTGTAG 59.248 36.000 0.00 0.00 0.00 2.74
2656 2970 4.727507 TTTGGTGCATGTTGTTTGTAGT 57.272 36.364 0.00 0.00 0.00 2.73
2657 2971 4.727507 TTGGTGCATGTTGTTTGTAGTT 57.272 36.364 0.00 0.00 0.00 2.24
2658 2972 4.727507 TGGTGCATGTTGTTTGTAGTTT 57.272 36.364 0.00 0.00 0.00 2.66
2659 2973 5.078411 TGGTGCATGTTGTTTGTAGTTTT 57.922 34.783 0.00 0.00 0.00 2.43
2660 2974 6.208988 TGGTGCATGTTGTTTGTAGTTTTA 57.791 33.333 0.00 0.00 0.00 1.52
2661 2975 6.810911 TGGTGCATGTTGTTTGTAGTTTTAT 58.189 32.000 0.00 0.00 0.00 1.40
2662 2976 7.941919 TGGTGCATGTTGTTTGTAGTTTTATA 58.058 30.769 0.00 0.00 0.00 0.98
2663 2977 8.580720 TGGTGCATGTTGTTTGTAGTTTTATAT 58.419 29.630 0.00 0.00 0.00 0.86
2701 3015 8.594881 ATTCAATATTGTAGATGAGTTCGTCC 57.405 34.615 14.97 0.00 32.40 4.79
2702 3016 7.348080 TCAATATTGTAGATGAGTTCGTCCT 57.652 36.000 14.97 0.00 32.40 3.85
2703 3017 8.459911 TCAATATTGTAGATGAGTTCGTCCTA 57.540 34.615 14.97 0.00 32.40 2.94
2704 3018 9.078990 TCAATATTGTAGATGAGTTCGTCCTAT 57.921 33.333 14.97 0.00 32.40 2.57
2705 3019 9.133627 CAATATTGTAGATGAGTTCGTCCTATG 57.866 37.037 7.32 0.00 32.40 2.23
2706 3020 6.961360 ATTGTAGATGAGTTCGTCCTATGA 57.039 37.500 0.00 0.00 32.40 2.15
2707 3021 6.961360 TTGTAGATGAGTTCGTCCTATGAT 57.039 37.500 0.00 0.00 32.40 2.45
2708 3022 6.961360 TGTAGATGAGTTCGTCCTATGATT 57.039 37.500 0.00 0.00 32.40 2.57
2709 3023 6.971602 TGTAGATGAGTTCGTCCTATGATTC 58.028 40.000 0.00 0.00 32.40 2.52
2710 3024 6.773200 TGTAGATGAGTTCGTCCTATGATTCT 59.227 38.462 0.00 0.00 32.40 2.40
2711 3025 6.723298 AGATGAGTTCGTCCTATGATTCTT 57.277 37.500 0.00 0.00 32.40 2.52
2712 3026 6.744112 AGATGAGTTCGTCCTATGATTCTTC 58.256 40.000 0.00 0.00 32.40 2.87
2713 3027 5.263968 TGAGTTCGTCCTATGATTCTTCC 57.736 43.478 0.00 0.00 0.00 3.46
2714 3028 4.202020 TGAGTTCGTCCTATGATTCTTCCG 60.202 45.833 0.00 0.00 0.00 4.30
2715 3029 3.952323 AGTTCGTCCTATGATTCTTCCGA 59.048 43.478 0.00 0.00 0.00 4.55
2716 3030 4.585162 AGTTCGTCCTATGATTCTTCCGAT 59.415 41.667 0.00 0.00 0.00 4.18
2717 3031 4.505313 TCGTCCTATGATTCTTCCGATG 57.495 45.455 0.00 0.00 0.00 3.84
2718 3032 4.142038 TCGTCCTATGATTCTTCCGATGA 58.858 43.478 0.00 0.00 0.00 2.92
2719 3033 4.583073 TCGTCCTATGATTCTTCCGATGAA 59.417 41.667 0.00 0.00 0.00 2.57
2736 3050 8.962884 TCCGATGAAGAATTTGATATTCAAGA 57.037 30.769 0.00 0.00 37.70 3.02
2737 3051 9.049523 TCCGATGAAGAATTTGATATTCAAGAG 57.950 33.333 0.00 0.00 37.70 2.85
2738 3052 8.288208 CCGATGAAGAATTTGATATTCAAGAGG 58.712 37.037 0.00 0.00 37.70 3.69
2739 3053 9.049523 CGATGAAGAATTTGATATTCAAGAGGA 57.950 33.333 0.00 0.00 37.70 3.71
2741 3055 9.917887 ATGAAGAATTTGATATTCAAGAGGAGT 57.082 29.630 0.00 0.00 37.70 3.85
2744 3058 9.844257 AAGAATTTGATATTCAAGAGGAGTAGG 57.156 33.333 0.00 0.00 37.70 3.18
2745 3059 9.218525 AGAATTTGATATTCAAGAGGAGTAGGA 57.781 33.333 0.00 0.00 37.70 2.94
2746 3060 9.267084 GAATTTGATATTCAAGAGGAGTAGGAC 57.733 37.037 0.00 0.00 37.70 3.85
2747 3061 6.732896 TTGATATTCAAGAGGAGTAGGACC 57.267 41.667 0.00 0.00 31.83 4.46
2748 3062 6.031964 TGATATTCAAGAGGAGTAGGACCT 57.968 41.667 0.00 0.00 40.80 3.85
2749 3063 6.444704 TGATATTCAAGAGGAGTAGGACCTT 58.555 40.000 0.00 0.00 37.93 3.50
2750 3064 6.325028 TGATATTCAAGAGGAGTAGGACCTTG 59.675 42.308 0.00 0.00 37.93 3.61
2751 3065 2.180276 TCAAGAGGAGTAGGACCTTGC 58.820 52.381 0.00 0.00 37.93 4.01
2752 3066 1.902508 CAAGAGGAGTAGGACCTTGCA 59.097 52.381 0.00 0.00 37.93 4.08
2753 3067 2.303022 CAAGAGGAGTAGGACCTTGCAA 59.697 50.000 0.00 0.00 37.93 4.08
2754 3068 2.839228 AGAGGAGTAGGACCTTGCAAT 58.161 47.619 0.00 0.00 37.93 3.56
2755 3069 2.503356 AGAGGAGTAGGACCTTGCAATG 59.497 50.000 0.00 0.00 37.93 2.82
2756 3070 2.501723 GAGGAGTAGGACCTTGCAATGA 59.498 50.000 8.84 0.00 37.93 2.57
2757 3071 3.118531 AGGAGTAGGACCTTGCAATGAT 58.881 45.455 8.84 0.00 33.55 2.45
2758 3072 3.135530 AGGAGTAGGACCTTGCAATGATC 59.864 47.826 8.84 2.69 33.55 2.92
2759 3073 3.471680 GAGTAGGACCTTGCAATGATCC 58.528 50.000 8.84 11.49 0.00 3.36
2760 3074 3.118531 AGTAGGACCTTGCAATGATCCT 58.881 45.455 22.72 22.72 42.52 3.24
2761 3075 4.298626 AGTAGGACCTTGCAATGATCCTA 58.701 43.478 21.19 21.19 40.36 2.94
2762 3076 3.853355 AGGACCTTGCAATGATCCTAG 57.147 47.619 19.54 0.00 38.04 3.02
2763 3077 2.158696 AGGACCTTGCAATGATCCTAGC 60.159 50.000 19.54 0.00 38.04 3.42
2764 3078 2.158696 GGACCTTGCAATGATCCTAGCT 60.159 50.000 8.84 0.00 0.00 3.32
2765 3079 3.071602 GGACCTTGCAATGATCCTAGCTA 59.928 47.826 8.84 0.00 0.00 3.32
2766 3080 4.263243 GGACCTTGCAATGATCCTAGCTAT 60.263 45.833 8.84 0.00 0.00 2.97
2767 3081 4.649692 ACCTTGCAATGATCCTAGCTATG 58.350 43.478 8.84 0.00 0.00 2.23
2768 3082 3.439476 CCTTGCAATGATCCTAGCTATGC 59.561 47.826 0.00 6.33 0.00 3.14
2769 3083 3.775261 TGCAATGATCCTAGCTATGCA 57.225 42.857 10.99 10.99 39.73 3.96
2770 3084 3.405831 TGCAATGATCCTAGCTATGCAC 58.594 45.455 10.99 0.10 37.40 4.57
2771 3085 2.414481 GCAATGATCCTAGCTATGCACG 59.586 50.000 8.08 0.00 32.80 5.34
2772 3086 3.657634 CAATGATCCTAGCTATGCACGT 58.342 45.455 0.00 0.00 0.00 4.49
2773 3087 3.584406 ATGATCCTAGCTATGCACGTC 57.416 47.619 0.00 0.00 0.00 4.34
2774 3088 2.306847 TGATCCTAGCTATGCACGTCA 58.693 47.619 0.00 0.00 0.00 4.35
2775 3089 2.693074 TGATCCTAGCTATGCACGTCAA 59.307 45.455 0.00 0.00 0.00 3.18
2776 3090 3.321968 TGATCCTAGCTATGCACGTCAAT 59.678 43.478 0.00 0.00 0.00 2.57
2777 3091 4.522789 TGATCCTAGCTATGCACGTCAATA 59.477 41.667 0.00 0.00 0.00 1.90
2778 3092 4.929819 TCCTAGCTATGCACGTCAATAA 57.070 40.909 0.00 0.00 0.00 1.40
2779 3093 5.270893 TCCTAGCTATGCACGTCAATAAA 57.729 39.130 0.00 0.00 0.00 1.40
2780 3094 5.666462 TCCTAGCTATGCACGTCAATAAAA 58.334 37.500 0.00 0.00 0.00 1.52
2781 3095 6.110033 TCCTAGCTATGCACGTCAATAAAAA 58.890 36.000 0.00 0.00 0.00 1.94
2782 3096 6.257849 TCCTAGCTATGCACGTCAATAAAAAG 59.742 38.462 0.00 0.00 0.00 2.27
2783 3097 4.662145 AGCTATGCACGTCAATAAAAAGC 58.338 39.130 0.00 0.00 0.00 3.51
2784 3098 3.791353 GCTATGCACGTCAATAAAAAGCC 59.209 43.478 0.00 0.00 0.00 4.35
2785 3099 3.932545 ATGCACGTCAATAAAAAGCCA 57.067 38.095 0.00 0.00 0.00 4.75
2786 3100 3.717400 TGCACGTCAATAAAAAGCCAA 57.283 38.095 0.00 0.00 0.00 4.52
2787 3101 4.046938 TGCACGTCAATAAAAAGCCAAA 57.953 36.364 0.00 0.00 0.00 3.28
2788 3102 4.433615 TGCACGTCAATAAAAAGCCAAAA 58.566 34.783 0.00 0.00 0.00 2.44
2789 3103 4.268884 TGCACGTCAATAAAAAGCCAAAAC 59.731 37.500 0.00 0.00 0.00 2.43
2790 3104 4.268884 GCACGTCAATAAAAAGCCAAAACA 59.731 37.500 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.334481 CCAACTACTACCCTAAATTTGCCG 59.666 45.833 0.00 0.00 0.00 5.69
17 18 1.636148 AAGACCCACGCCAACTACTA 58.364 50.000 0.00 0.00 0.00 1.82
30 31 4.453177 AGAGCGTAAAGAGTAAAGACCC 57.547 45.455 0.00 0.00 0.00 4.46
31 32 6.028987 CAGTAGAGCGTAAAGAGTAAAGACC 58.971 44.000 0.00 0.00 0.00 3.85
33 34 5.415077 AGCAGTAGAGCGTAAAGAGTAAAGA 59.585 40.000 0.00 0.00 40.15 2.52
34 35 5.642686 AGCAGTAGAGCGTAAAGAGTAAAG 58.357 41.667 0.00 0.00 40.15 1.85
35 36 5.415077 AGAGCAGTAGAGCGTAAAGAGTAAA 59.585 40.000 0.00 0.00 40.15 2.01
36 37 4.942483 AGAGCAGTAGAGCGTAAAGAGTAA 59.058 41.667 0.00 0.00 40.15 2.24
37 38 4.515361 AGAGCAGTAGAGCGTAAAGAGTA 58.485 43.478 0.00 0.00 40.15 2.59
38 39 3.349022 AGAGCAGTAGAGCGTAAAGAGT 58.651 45.455 0.00 0.00 40.15 3.24
39 40 4.812091 TCTAGAGCAGTAGAGCGTAAAGAG 59.188 45.833 0.00 0.00 40.15 2.85
108 109 9.598517 GAAATTCACATACTCTTCTCTCTTCAT 57.401 33.333 0.00 0.00 0.00 2.57
115 116 7.219917 CAGTCGAGAAATTCACATACTCTTCTC 59.780 40.741 0.00 0.00 36.84 2.87
120 121 7.388290 GATCAGTCGAGAAATTCACATACTC 57.612 40.000 0.00 0.00 0.00 2.59
145 146 0.736325 ACAGTCGCCGTTATGCAGAC 60.736 55.000 0.00 0.00 36.06 3.51
162 163 4.049869 TGAATGTTTAACGTACGCTCACA 58.950 39.130 16.72 13.37 0.00 3.58
187 188 5.362430 TGGTGTTTATTTTCTTGGAACTGCT 59.638 36.000 0.00 0.00 0.00 4.24
223 225 1.742831 ACGCCACGATGCAACAATTAT 59.257 42.857 0.00 0.00 0.00 1.28
224 226 1.135831 CACGCCACGATGCAACAATTA 60.136 47.619 0.00 0.00 0.00 1.40
225 227 0.387112 CACGCCACGATGCAACAATT 60.387 50.000 0.00 0.00 0.00 2.32
226 228 1.209898 CACGCCACGATGCAACAAT 59.790 52.632 0.00 0.00 0.00 2.71
227 229 1.440145 TTCACGCCACGATGCAACAA 61.440 50.000 0.00 0.00 0.00 2.83
228 230 1.840630 CTTCACGCCACGATGCAACA 61.841 55.000 0.00 0.00 0.00 3.33
229 231 1.154413 CTTCACGCCACGATGCAAC 60.154 57.895 0.00 0.00 0.00 4.17
230 232 2.965147 GCTTCACGCCACGATGCAA 61.965 57.895 0.00 0.00 34.58 4.08
231 233 3.422303 GCTTCACGCCACGATGCA 61.422 61.111 0.00 0.00 34.58 3.96
232 234 4.505217 CGCTTCACGCCACGATGC 62.505 66.667 0.00 0.00 34.21 3.91
292 305 1.264288 GAGCACGGAAAAGAACACTGG 59.736 52.381 0.00 0.00 0.00 4.00
379 393 0.027586 GATCATAACCAACGCACGGC 59.972 55.000 0.00 0.00 0.00 5.68
546 560 0.396695 CCCGGGGTTAGACTGCTCTA 60.397 60.000 14.71 0.00 0.00 2.43
547 561 1.686110 CCCGGGGTTAGACTGCTCT 60.686 63.158 14.71 0.00 0.00 4.09
548 562 2.901042 CCCGGGGTTAGACTGCTC 59.099 66.667 14.71 0.00 0.00 4.26
584 599 0.602562 CCCTGATCTGATCGAGCTCC 59.397 60.000 8.47 0.00 0.00 4.70
807 838 3.469863 AACAGCTCGGCGGGAACAA 62.470 57.895 12.93 0.00 0.00 2.83
809 840 3.119096 GAACAGCTCGGCGGGAAC 61.119 66.667 12.93 0.00 0.00 3.62
867 898 1.048601 GGGGTCGGCTCTTGATATCA 58.951 55.000 0.00 0.00 0.00 2.15
868 899 0.038159 CGGGGTCGGCTCTTGATATC 60.038 60.000 0.00 0.00 0.00 1.63
936 1218 3.007940 CACTGGTGAGTTTGGATGAGGTA 59.992 47.826 0.00 0.00 0.00 3.08
1005 1292 1.508632 CGAAAAGAACCAGCCGAGAA 58.491 50.000 0.00 0.00 0.00 2.87
1006 1293 0.320421 CCGAAAAGAACCAGCCGAGA 60.320 55.000 0.00 0.00 0.00 4.04
1083 1371 1.071471 CTTGACGGAGCCAACCACT 59.929 57.895 0.00 0.00 0.00 4.00
1158 1446 2.404215 CCAAACGTATAGGAGCGATGG 58.596 52.381 0.00 0.00 34.52 3.51
1177 1465 3.375299 CCAAAGTGTTCATAGCTACAGCC 59.625 47.826 0.00 0.00 43.38 4.85
1235 1530 0.035152 TGCACTTGATGGCTACCTGG 60.035 55.000 0.00 0.00 0.00 4.45
1476 1771 2.813908 CGCGAGGTAGGTGTTGGC 60.814 66.667 0.00 0.00 0.00 4.52
1551 1846 2.819595 CGGGCCGACCATGAAGTG 60.820 66.667 24.41 0.00 40.22 3.16
1766 2067 1.201429 TCTTGGGCTTGTCCTCCTCC 61.201 60.000 0.00 0.00 34.39 4.30
1838 2139 1.098050 CCTTGCTGTAATGCCACTCC 58.902 55.000 0.00 0.00 0.00 3.85
1866 2170 0.800683 TCTCCAAATGTCGTAGCGCG 60.801 55.000 0.00 0.00 43.01 6.86
1928 2238 5.808030 CGGAACTAAACAAAACAACCAACAT 59.192 36.000 0.00 0.00 0.00 2.71
2049 2361 3.253188 AGTTCGCAAATGCAAAGCTCTAA 59.747 39.130 6.18 0.00 42.21 2.10
2081 2393 2.359900 ACACTAAGTACTACCCGTCCG 58.640 52.381 0.00 0.00 0.00 4.79
2097 2409 6.312918 CGTAATGCCAACAAGATAGTTACACT 59.687 38.462 0.00 0.00 0.00 3.55
2098 2410 6.091713 ACGTAATGCCAACAAGATAGTTACAC 59.908 38.462 0.00 0.00 0.00 2.90
2100 2412 6.657836 ACGTAATGCCAACAAGATAGTTAC 57.342 37.500 0.00 0.00 0.00 2.50
2118 2432 2.612672 CTGGATGCTCGACTCTACGTAA 59.387 50.000 0.00 0.00 34.70 3.18
2119 2433 2.159000 TCTGGATGCTCGACTCTACGTA 60.159 50.000 0.00 0.00 34.70 3.57
2120 2434 1.018148 CTGGATGCTCGACTCTACGT 58.982 55.000 0.00 0.00 34.70 3.57
2121 2435 1.300481 TCTGGATGCTCGACTCTACG 58.700 55.000 0.00 0.00 0.00 3.51
2129 2443 4.756084 ACTTTTCTTTTCTGGATGCTCG 57.244 40.909 0.00 0.00 0.00 5.03
2155 2469 7.731054 CACCTATGCTATAAGAAAAGTCCTCT 58.269 38.462 0.00 0.00 0.00 3.69
2173 2487 1.397190 CGCTAAAATCGCGCACCTATG 60.397 52.381 8.75 0.00 44.33 2.23
2174 2488 0.859232 CGCTAAAATCGCGCACCTAT 59.141 50.000 8.75 0.00 44.33 2.57
2175 2489 2.293765 CGCTAAAATCGCGCACCTA 58.706 52.632 8.75 0.00 44.33 3.08
2176 2490 3.089784 CGCTAAAATCGCGCACCT 58.910 55.556 8.75 0.00 44.33 4.00
2183 2497 1.927827 CAACGCGGCGCTAAAATCG 60.928 57.895 30.54 14.71 0.00 3.34
2184 2498 0.179210 TTCAACGCGGCGCTAAAATC 60.179 50.000 30.54 0.00 0.00 2.17
2185 2499 0.238817 TTTCAACGCGGCGCTAAAAT 59.761 45.000 30.54 8.11 0.00 1.82
2186 2500 0.029035 TTTTCAACGCGGCGCTAAAA 59.971 45.000 30.54 23.92 0.00 1.52
2187 2501 0.029035 TTTTTCAACGCGGCGCTAAA 59.971 45.000 30.54 19.96 0.00 1.85
2188 2502 1.647629 TTTTTCAACGCGGCGCTAA 59.352 47.368 30.54 15.28 0.00 3.09
2189 2503 3.331319 TTTTTCAACGCGGCGCTA 58.669 50.000 30.54 9.69 0.00 4.26
2214 2528 3.477224 GACTGGGCGCGTGCAAAAA 62.477 57.895 24.18 3.60 45.35 1.94
2215 2529 3.959975 GACTGGGCGCGTGCAAAA 61.960 61.111 24.18 6.28 45.35 2.44
2225 2539 3.998672 TGTCCGTTCCGACTGGGC 61.999 66.667 0.00 0.00 35.24 5.36
2226 2540 2.048503 GTGTCCGTTCCGACTGGG 60.049 66.667 0.00 0.00 35.24 4.45
2227 2541 1.663702 GTGTGTCCGTTCCGACTGG 60.664 63.158 0.00 0.00 33.70 4.00
2228 2542 0.528901 TTGTGTGTCCGTTCCGACTG 60.529 55.000 0.00 0.00 33.70 3.51
2229 2543 0.176219 TTTGTGTGTCCGTTCCGACT 59.824 50.000 0.00 0.00 33.70 4.18
2230 2544 1.223187 ATTTGTGTGTCCGTTCCGAC 58.777 50.000 0.00 0.00 0.00 4.79
2231 2545 2.801679 GTTATTTGTGTGTCCGTTCCGA 59.198 45.455 0.00 0.00 0.00 4.55
2232 2546 2.410517 CGTTATTTGTGTGTCCGTTCCG 60.411 50.000 0.00 0.00 0.00 4.30
2233 2547 2.663606 GCGTTATTTGTGTGTCCGTTCC 60.664 50.000 0.00 0.00 0.00 3.62
2234 2548 2.567067 GCGTTATTTGTGTGTCCGTTC 58.433 47.619 0.00 0.00 0.00 3.95
2235 2549 1.070443 CGCGTTATTTGTGTGTCCGTT 60.070 47.619 0.00 0.00 0.00 4.44
2236 2550 0.509499 CGCGTTATTTGTGTGTCCGT 59.491 50.000 0.00 0.00 0.00 4.69
2237 2551 0.509499 ACGCGTTATTTGTGTGTCCG 59.491 50.000 5.58 0.00 0.00 4.79
2238 2552 1.945207 CACGCGTTATTTGTGTGTCC 58.055 50.000 10.22 0.00 41.64 4.02
2239 2553 1.314581 GCACGCGTTATTTGTGTGTC 58.685 50.000 10.22 0.00 46.71 3.67
2240 2554 0.383737 CGCACGCGTTATTTGTGTGT 60.384 50.000 10.22 0.00 46.71 3.72
2242 2556 4.810278 CGCACGCGTTATTTGTGT 57.190 50.000 10.22 0.00 36.04 3.72
2252 2566 1.628983 CAACTATACCACGCACGCG 59.371 57.895 10.36 10.36 46.03 6.01
2253 2567 0.738412 ACCAACTATACCACGCACGC 60.738 55.000 0.00 0.00 0.00 5.34
2254 2568 1.657094 GAACCAACTATACCACGCACG 59.343 52.381 0.00 0.00 0.00 5.34
2255 2569 2.671396 CTGAACCAACTATACCACGCAC 59.329 50.000 0.00 0.00 0.00 5.34
2256 2570 2.933492 GCTGAACCAACTATACCACGCA 60.933 50.000 0.00 0.00 0.00 5.24
2257 2571 1.664151 GCTGAACCAACTATACCACGC 59.336 52.381 0.00 0.00 0.00 5.34
2258 2572 1.924524 CGCTGAACCAACTATACCACG 59.075 52.381 0.00 0.00 0.00 4.94
2259 2573 2.671396 CACGCTGAACCAACTATACCAC 59.329 50.000 0.00 0.00 0.00 4.16
2260 2574 2.933492 GCACGCTGAACCAACTATACCA 60.933 50.000 0.00 0.00 0.00 3.25
2261 2575 1.664151 GCACGCTGAACCAACTATACC 59.336 52.381 0.00 0.00 0.00 2.73
2262 2576 1.323534 CGCACGCTGAACCAACTATAC 59.676 52.381 0.00 0.00 0.00 1.47
2263 2577 1.635844 CGCACGCTGAACCAACTATA 58.364 50.000 0.00 0.00 0.00 1.31
2264 2578 1.019278 CCGCACGCTGAACCAACTAT 61.019 55.000 0.00 0.00 0.00 2.12
2265 2579 1.666553 CCGCACGCTGAACCAACTA 60.667 57.895 0.00 0.00 0.00 2.24
2266 2580 2.972505 CCGCACGCTGAACCAACT 60.973 61.111 0.00 0.00 0.00 3.16
2267 2581 2.954753 CTCCGCACGCTGAACCAAC 61.955 63.158 0.00 0.00 0.00 3.77
2268 2582 2.664851 CTCCGCACGCTGAACCAA 60.665 61.111 0.00 0.00 0.00 3.67
2271 2585 2.387125 TTTTGCTCCGCACGCTGAAC 62.387 55.000 0.00 0.00 38.71 3.18
2272 2586 2.183504 TTTTGCTCCGCACGCTGAA 61.184 52.632 0.00 0.00 38.71 3.02
2273 2587 2.590291 TTTTGCTCCGCACGCTGA 60.590 55.556 0.00 0.00 38.71 4.26
2274 2588 2.427410 GTTTTGCTCCGCACGCTG 60.427 61.111 0.00 0.00 38.71 5.18
2275 2589 4.012895 CGTTTTGCTCCGCACGCT 62.013 61.111 0.00 0.00 38.71 5.07
2276 2590 4.007940 TCGTTTTGCTCCGCACGC 62.008 61.111 0.00 0.00 38.71 5.34
2277 2591 2.127758 GTCGTTTTGCTCCGCACG 60.128 61.111 0.00 0.00 38.71 5.34
2278 2592 0.452784 GATGTCGTTTTGCTCCGCAC 60.453 55.000 0.00 0.00 38.71 5.34
2279 2593 1.866237 GATGTCGTTTTGCTCCGCA 59.134 52.632 0.00 0.00 36.47 5.69
2280 2594 1.225745 CGATGTCGTTTTGCTCCGC 60.226 57.895 0.00 0.00 34.11 5.54
2281 2595 1.225745 GCGATGTCGTTTTGCTCCG 60.226 57.895 4.20 0.00 42.22 4.63
2282 2596 1.225745 CGCGATGTCGTTTTGCTCC 60.226 57.895 0.00 0.00 42.22 4.70
2283 2597 1.859135 GCGCGATGTCGTTTTGCTC 60.859 57.895 12.10 0.00 42.22 4.26
2284 2598 2.173382 GCGCGATGTCGTTTTGCT 59.827 55.556 12.10 0.00 42.22 3.91
2285 2599 3.223688 CGCGCGATGTCGTTTTGC 61.224 61.111 28.94 3.27 42.22 3.68
2286 2600 3.223688 GCGCGCGATGTCGTTTTG 61.224 61.111 37.18 0.00 42.22 2.44
2287 2601 4.439472 GGCGCGCGATGTCGTTTT 62.439 61.111 37.18 0.00 42.22 2.43
2299 2613 2.349648 CACGAAATAAGCGGCGCG 60.350 61.111 27.59 12.84 0.00 6.86
2300 2614 2.647791 GCACGAAATAAGCGGCGC 60.648 61.111 26.86 26.86 0.00 6.53
2305 2619 2.022762 CGGGCGCACGAAATAAGC 59.977 61.111 31.90 0.00 35.47 3.09
2306 2620 2.022762 GCGGGCGCACGAAATAAG 59.977 61.111 39.76 4.83 41.49 1.73
2307 2621 3.501548 GGCGGGCGCACGAAATAA 61.502 61.111 39.76 0.00 44.11 1.40
2327 2641 3.887327 GTCGTTGTCTAGCGCGCG 61.887 66.667 28.44 28.44 0.00 6.86
2328 2642 3.887327 CGTCGTTGTCTAGCGCGC 61.887 66.667 26.66 26.66 0.00 6.86
2329 2643 2.202260 TCGTCGTTGTCTAGCGCG 60.202 61.111 0.00 0.00 33.89 6.86
2330 2644 1.126996 GAGTCGTCGTTGTCTAGCGC 61.127 60.000 0.00 0.00 0.00 5.92
2331 2645 0.852412 CGAGTCGTCGTTGTCTAGCG 60.852 60.000 3.82 0.00 41.57 4.26
2332 2646 2.913887 CGAGTCGTCGTTGTCTAGC 58.086 57.895 3.82 0.00 41.57 3.42
2344 2658 4.470050 GAAGTTGCGCGCGAGTCG 62.470 66.667 37.18 8.54 42.12 4.18
2345 2659 4.135493 GGAAGTTGCGCGCGAGTC 62.135 66.667 37.18 23.18 0.00 3.36
2346 2660 4.961511 TGGAAGTTGCGCGCGAGT 62.962 61.111 37.18 25.41 0.00 4.18
2347 2661 4.430423 GTGGAAGTTGCGCGCGAG 62.430 66.667 37.18 8.39 0.00 5.03
2350 2664 3.959975 TTGGTGGAAGTTGCGCGC 61.960 61.111 27.26 27.26 0.00 6.86
2351 2665 2.051345 GTTGGTGGAAGTTGCGCG 60.051 61.111 0.00 0.00 0.00 6.86
2352 2666 2.335011 GGTTGGTGGAAGTTGCGC 59.665 61.111 0.00 0.00 0.00 6.09
2353 2667 2.637025 CGGTTGGTGGAAGTTGCG 59.363 61.111 0.00 0.00 0.00 4.85
2354 2668 2.335011 GCGGTTGGTGGAAGTTGC 59.665 61.111 0.00 0.00 0.00 4.17
2355 2669 1.795170 CTGGCGGTTGGTGGAAGTTG 61.795 60.000 0.00 0.00 0.00 3.16
2356 2670 1.528309 CTGGCGGTTGGTGGAAGTT 60.528 57.895 0.00 0.00 0.00 2.66
2357 2671 1.779061 ATCTGGCGGTTGGTGGAAGT 61.779 55.000 0.00 0.00 0.00 3.01
2358 2672 1.002134 ATCTGGCGGTTGGTGGAAG 60.002 57.895 0.00 0.00 0.00 3.46
2359 2673 1.002624 GATCTGGCGGTTGGTGGAA 60.003 57.895 0.00 0.00 0.00 3.53
2360 2674 2.668632 GATCTGGCGGTTGGTGGA 59.331 61.111 0.00 0.00 0.00 4.02
2361 2675 2.438434 GGATCTGGCGGTTGGTGG 60.438 66.667 0.00 0.00 0.00 4.61
2362 2676 1.303236 TTGGATCTGGCGGTTGGTG 60.303 57.895 0.00 0.00 0.00 4.17
2363 2677 1.002134 CTTGGATCTGGCGGTTGGT 60.002 57.895 0.00 0.00 0.00 3.67
2364 2678 2.409870 GCTTGGATCTGGCGGTTGG 61.410 63.158 0.00 0.00 0.00 3.77
2365 2679 2.753966 CGCTTGGATCTGGCGGTTG 61.754 63.158 15.61 0.00 44.32 3.77
2366 2680 2.436646 CGCTTGGATCTGGCGGTT 60.437 61.111 15.61 0.00 44.32 4.44
2388 2702 3.976701 AAATGGGGAGGTGCGAGCG 62.977 63.158 0.00 0.00 0.00 5.03
2389 2703 2.044946 AAATGGGGAGGTGCGAGC 60.045 61.111 0.00 0.00 0.00 5.03
2390 2704 2.409870 GCAAATGGGGAGGTGCGAG 61.410 63.158 0.00 0.00 0.00 5.03
2391 2705 2.361104 GCAAATGGGGAGGTGCGA 60.361 61.111 0.00 0.00 0.00 5.10
2392 2706 2.361610 AGCAAATGGGGAGGTGCG 60.362 61.111 0.00 0.00 41.90 5.34
2393 2707 2.054453 GGAGCAAATGGGGAGGTGC 61.054 63.158 0.00 0.00 37.26 5.01
2394 2708 1.750399 CGGAGCAAATGGGGAGGTG 60.750 63.158 0.00 0.00 0.00 4.00
2395 2709 2.677228 CGGAGCAAATGGGGAGGT 59.323 61.111 0.00 0.00 0.00 3.85
2396 2710 2.124151 CCGGAGCAAATGGGGAGG 60.124 66.667 0.00 0.00 0.00 4.30
2397 2711 2.830370 GCCGGAGCAAATGGGGAG 60.830 66.667 5.05 0.00 39.53 4.30
2398 2712 4.794648 CGCCGGAGCAAATGGGGA 62.795 66.667 5.05 0.00 39.83 4.81
2399 2713 4.794648 TCGCCGGAGCAAATGGGG 62.795 66.667 5.05 0.00 39.83 4.96
2400 2714 3.508840 GTCGCCGGAGCAAATGGG 61.509 66.667 5.05 0.00 39.83 4.00
2401 2715 3.508840 GGTCGCCGGAGCAAATGG 61.509 66.667 5.05 0.00 40.40 3.16
2402 2716 3.508840 GGGTCGCCGGAGCAAATG 61.509 66.667 5.05 0.00 42.46 2.32
2424 2738 4.990553 GATAGGCCGGGGAAGCGC 62.991 72.222 2.18 0.00 0.00 5.92
2425 2739 4.315941 GGATAGGCCGGGGAAGCG 62.316 72.222 2.18 0.00 0.00 4.68
2426 2740 2.849646 AGGATAGGCCGGGGAAGC 60.850 66.667 2.18 0.00 43.43 3.86
2427 2741 2.574955 CGAGGATAGGCCGGGGAAG 61.575 68.421 2.18 0.00 43.43 3.46
2428 2742 2.523412 CGAGGATAGGCCGGGGAA 60.523 66.667 2.18 0.00 43.43 3.97
2429 2743 3.829226 ACGAGGATAGGCCGGGGA 61.829 66.667 2.18 0.00 43.43 4.81
2430 2744 3.616721 CACGAGGATAGGCCGGGG 61.617 72.222 2.18 0.00 43.43 5.73
2431 2745 4.301027 GCACGAGGATAGGCCGGG 62.301 72.222 2.18 0.00 43.43 5.73
2432 2746 3.536917 TGCACGAGGATAGGCCGG 61.537 66.667 0.00 0.00 43.43 6.13
2433 2747 2.279517 GTGCACGAGGATAGGCCG 60.280 66.667 0.00 0.00 43.43 6.13
2434 2748 2.109181 GGTGCACGAGGATAGGCC 59.891 66.667 11.45 0.00 0.00 5.19
2445 2759 2.050985 GAAGCAACAGCGGTGCAC 60.051 61.111 15.82 8.80 0.00 4.57
2446 2760 3.286751 GGAAGCAACAGCGGTGCA 61.287 61.111 15.82 0.00 0.00 4.57
2447 2761 2.970974 GAGGAAGCAACAGCGGTGC 61.971 63.158 15.82 10.05 0.00 5.01
2448 2762 2.328099 GGAGGAAGCAACAGCGGTG 61.328 63.158 14.13 14.13 0.00 4.94
2449 2763 2.032681 GGAGGAAGCAACAGCGGT 59.967 61.111 0.00 0.00 0.00 5.68
2450 2764 2.032528 TGGAGGAAGCAACAGCGG 59.967 61.111 0.00 0.00 0.00 5.52
2451 2765 2.328099 GGTGGAGGAAGCAACAGCG 61.328 63.158 0.00 0.00 0.00 5.18
2452 2766 0.957888 GAGGTGGAGGAAGCAACAGC 60.958 60.000 0.00 0.00 0.00 4.40
2453 2767 0.689623 AGAGGTGGAGGAAGCAACAG 59.310 55.000 0.00 0.00 0.00 3.16
2454 2768 0.687354 GAGAGGTGGAGGAAGCAACA 59.313 55.000 0.00 0.00 0.00 3.33
2455 2769 0.687354 TGAGAGGTGGAGGAAGCAAC 59.313 55.000 0.00 0.00 0.00 4.17
2456 2770 0.687354 GTGAGAGGTGGAGGAAGCAA 59.313 55.000 0.00 0.00 0.00 3.91
2457 2771 1.194781 GGTGAGAGGTGGAGGAAGCA 61.195 60.000 0.00 0.00 0.00 3.91
2458 2772 1.599576 GGTGAGAGGTGGAGGAAGC 59.400 63.158 0.00 0.00 0.00 3.86
2459 2773 1.893786 CGGTGAGAGGTGGAGGAAG 59.106 63.158 0.00 0.00 0.00 3.46
2460 2774 2.283529 GCGGTGAGAGGTGGAGGAA 61.284 63.158 0.00 0.00 0.00 3.36
2461 2775 2.680352 GCGGTGAGAGGTGGAGGA 60.680 66.667 0.00 0.00 0.00 3.71
2462 2776 3.775654 GGCGGTGAGAGGTGGAGG 61.776 72.222 0.00 0.00 0.00 4.30
2463 2777 2.997315 TGGCGGTGAGAGGTGGAG 60.997 66.667 0.00 0.00 0.00 3.86
2464 2778 3.311110 GTGGCGGTGAGAGGTGGA 61.311 66.667 0.00 0.00 0.00 4.02
2465 2779 4.394712 GGTGGCGGTGAGAGGTGG 62.395 72.222 0.00 0.00 0.00 4.61
2466 2780 4.742201 CGGTGGCGGTGAGAGGTG 62.742 72.222 0.00 0.00 0.00 4.00
2483 2797 4.587189 ATAGCGCGTTCGAGGGGC 62.587 66.667 8.43 16.44 41.40 5.80
2484 2798 1.949631 GAATAGCGCGTTCGAGGGG 60.950 63.158 8.43 0.00 38.10 4.79
2485 2799 1.949631 GGAATAGCGCGTTCGAGGG 60.950 63.158 18.05 0.00 38.10 4.30
2486 2800 0.935366 GAGGAATAGCGCGTTCGAGG 60.935 60.000 18.05 0.00 38.10 4.63
2487 2801 0.935366 GGAGGAATAGCGCGTTCGAG 60.935 60.000 18.05 0.00 38.10 4.04
2488 2802 1.065273 GGAGGAATAGCGCGTTCGA 59.935 57.895 18.05 0.00 38.10 3.71
2489 2803 2.293627 CGGAGGAATAGCGCGTTCG 61.294 63.158 18.05 7.46 39.07 3.95
2490 2804 1.065273 TCGGAGGAATAGCGCGTTC 59.935 57.895 16.93 16.93 0.00 3.95
2491 2805 1.226888 GTCGGAGGAATAGCGCGTT 60.227 57.895 8.43 3.54 0.00 4.84
2492 2806 2.412112 GTCGGAGGAATAGCGCGT 59.588 61.111 8.43 0.00 0.00 6.01
2493 2807 2.657484 TTCGTCGGAGGAATAGCGCG 62.657 60.000 8.92 0.00 0.00 6.86
2494 2808 0.318784 ATTCGTCGGAGGAATAGCGC 60.319 55.000 20.82 0.00 31.68 5.92
2495 2809 2.852748 CTATTCGTCGGAGGAATAGCG 58.147 52.381 31.32 19.17 42.44 4.26
2498 2812 1.068748 GCGCTATTCGTCGGAGGAATA 60.069 52.381 23.92 23.92 41.07 1.75
2499 2813 0.318784 GCGCTATTCGTCGGAGGAAT 60.319 55.000 24.19 24.19 41.07 3.01
2500 2814 1.065273 GCGCTATTCGTCGGAGGAA 59.935 57.895 14.68 14.68 41.07 3.36
2501 2815 2.719979 GCGCTATTCGTCGGAGGA 59.280 61.111 0.00 0.00 41.07 3.71
2502 2816 2.354773 GGCGCTATTCGTCGGAGG 60.355 66.667 7.64 0.00 41.07 4.30
2503 2817 2.354773 GGGCGCTATTCGTCGGAG 60.355 66.667 7.64 0.00 45.25 4.63
2504 2818 4.260355 CGGGCGCTATTCGTCGGA 62.260 66.667 7.64 0.00 45.25 4.55
2543 2857 3.622060 ATTCGGGACACCTTGCGGG 62.622 63.158 0.00 0.00 41.89 6.13
2544 2858 0.391927 TAATTCGGGACACCTTGCGG 60.392 55.000 0.00 0.00 33.28 5.69
2545 2859 0.725117 GTAATTCGGGACACCTTGCG 59.275 55.000 0.00 0.00 33.28 4.85
2546 2860 2.109425 AGTAATTCGGGACACCTTGC 57.891 50.000 0.00 0.00 33.28 4.01
2547 2861 3.408634 ACAAGTAATTCGGGACACCTTG 58.591 45.455 0.00 0.00 33.28 3.61
2548 2862 3.071892 TGACAAGTAATTCGGGACACCTT 59.928 43.478 0.00 0.00 33.28 3.50
2549 2863 2.635915 TGACAAGTAATTCGGGACACCT 59.364 45.455 0.00 0.00 33.28 4.00
2550 2864 2.740447 GTGACAAGTAATTCGGGACACC 59.260 50.000 0.00 0.00 0.00 4.16
2551 2865 3.395639 TGTGACAAGTAATTCGGGACAC 58.604 45.455 0.00 0.00 0.00 3.67
2552 2866 3.755112 TGTGACAAGTAATTCGGGACA 57.245 42.857 0.00 0.00 0.00 4.02
2553 2867 5.427036 TTTTGTGACAAGTAATTCGGGAC 57.573 39.130 0.00 0.00 0.00 4.46
2554 2868 6.642707 ATTTTTGTGACAAGTAATTCGGGA 57.357 33.333 0.00 0.00 0.00 5.14
2555 2869 6.521821 CGTATTTTTGTGACAAGTAATTCGGG 59.478 38.462 17.71 4.65 0.00 5.14
2556 2870 7.073265 ACGTATTTTTGTGACAAGTAATTCGG 58.927 34.615 23.55 13.90 0.00 4.30
2557 2871 8.007716 AGACGTATTTTTGTGACAAGTAATTCG 58.992 33.333 20.88 20.88 0.00 3.34
2560 2874 9.701098 TCTAGACGTATTTTTGTGACAAGTAAT 57.299 29.630 0.00 5.67 0.00 1.89
2561 2875 9.701098 ATCTAGACGTATTTTTGTGACAAGTAA 57.299 29.630 0.00 0.00 0.00 2.24
2563 2877 9.136952 GTATCTAGACGTATTTTTGTGACAAGT 57.863 33.333 0.00 0.00 0.00 3.16
2564 2878 9.135843 TGTATCTAGACGTATTTTTGTGACAAG 57.864 33.333 0.00 0.00 0.00 3.16
2565 2879 9.647797 ATGTATCTAGACGTATTTTTGTGACAA 57.352 29.630 0.00 0.00 0.00 3.18
2566 2880 9.297586 GATGTATCTAGACGTATTTTTGTGACA 57.702 33.333 0.00 0.00 0.00 3.58
2567 2881 8.753175 GGATGTATCTAGACGTATTTTTGTGAC 58.247 37.037 0.00 0.00 0.00 3.67
2568 2882 8.471609 TGGATGTATCTAGACGTATTTTTGTGA 58.528 33.333 0.00 0.00 0.00 3.58
2569 2883 8.642908 TGGATGTATCTAGACGTATTTTTGTG 57.357 34.615 0.00 0.00 0.00 3.33
2570 2884 9.832445 AATGGATGTATCTAGACGTATTTTTGT 57.168 29.630 0.00 0.00 0.00 2.83
2574 2888 9.645059 CATGAATGGATGTATCTAGACGTATTT 57.355 33.333 0.00 0.00 0.00 1.40
2575 2889 7.761704 GCATGAATGGATGTATCTAGACGTATT 59.238 37.037 0.00 0.00 0.00 1.89
2576 2890 7.261325 GCATGAATGGATGTATCTAGACGTAT 58.739 38.462 0.00 0.00 0.00 3.06
2577 2891 6.621613 GCATGAATGGATGTATCTAGACGTA 58.378 40.000 0.00 0.00 0.00 3.57
2578 2892 5.473931 GCATGAATGGATGTATCTAGACGT 58.526 41.667 0.00 0.00 0.00 4.34
2579 2893 4.560427 CGCATGAATGGATGTATCTAGACG 59.440 45.833 0.00 0.00 0.00 4.18
2580 2894 5.574830 GTCGCATGAATGGATGTATCTAGAC 59.425 44.000 0.00 0.00 0.00 2.59
2581 2895 5.243730 TGTCGCATGAATGGATGTATCTAGA 59.756 40.000 0.00 0.00 0.00 2.43
2582 2896 5.473039 TGTCGCATGAATGGATGTATCTAG 58.527 41.667 0.00 0.00 0.00 2.43
2583 2897 5.467035 TGTCGCATGAATGGATGTATCTA 57.533 39.130 0.00 0.00 0.00 1.98
2584 2898 4.341366 TGTCGCATGAATGGATGTATCT 57.659 40.909 0.00 0.00 0.00 1.98
2585 2899 4.512944 ACTTGTCGCATGAATGGATGTATC 59.487 41.667 0.00 0.00 0.00 2.24
2586 2900 4.454678 ACTTGTCGCATGAATGGATGTAT 58.545 39.130 0.00 0.00 0.00 2.29
2587 2901 3.872696 ACTTGTCGCATGAATGGATGTA 58.127 40.909 0.00 0.00 0.00 2.29
2588 2902 2.715046 ACTTGTCGCATGAATGGATGT 58.285 42.857 0.00 0.00 0.00 3.06
2589 2903 4.880886 TTACTTGTCGCATGAATGGATG 57.119 40.909 0.00 0.00 0.00 3.51
2590 2904 4.516698 GGATTACTTGTCGCATGAATGGAT 59.483 41.667 0.00 0.00 0.00 3.41
2591 2905 3.876914 GGATTACTTGTCGCATGAATGGA 59.123 43.478 0.00 0.00 0.00 3.41
2592 2906 3.003689 GGGATTACTTGTCGCATGAATGG 59.996 47.826 0.00 0.00 0.00 3.16
2593 2907 3.303329 CGGGATTACTTGTCGCATGAATG 60.303 47.826 0.00 0.00 0.00 2.67
2594 2908 2.872245 CGGGATTACTTGTCGCATGAAT 59.128 45.455 0.00 0.00 0.00 2.57
2595 2909 2.276201 CGGGATTACTTGTCGCATGAA 58.724 47.619 0.00 0.00 0.00 2.57
2596 2910 1.472552 CCGGGATTACTTGTCGCATGA 60.473 52.381 0.00 0.00 0.00 3.07
2597 2911 0.937304 CCGGGATTACTTGTCGCATG 59.063 55.000 0.00 0.00 0.00 4.06
2598 2912 0.828022 TCCGGGATTACTTGTCGCAT 59.172 50.000 0.00 0.00 0.00 4.73
2599 2913 0.108520 GTCCGGGATTACTTGTCGCA 60.109 55.000 0.00 0.00 0.00 5.10
2600 2914 0.108520 TGTCCGGGATTACTTGTCGC 60.109 55.000 0.00 0.00 0.00 5.19
2601 2915 1.475280 TCTGTCCGGGATTACTTGTCG 59.525 52.381 0.00 0.00 0.00 4.35
2602 2916 2.159085 CCTCTGTCCGGGATTACTTGTC 60.159 54.545 0.00 0.00 0.00 3.18
2603 2917 1.831736 CCTCTGTCCGGGATTACTTGT 59.168 52.381 0.00 0.00 0.00 3.16
2604 2918 1.139058 CCCTCTGTCCGGGATTACTTG 59.861 57.143 0.00 0.00 44.90 3.16
2605 2919 1.007963 TCCCTCTGTCCGGGATTACTT 59.992 52.381 0.00 0.00 45.67 2.24
2606 2920 0.635009 TCCCTCTGTCCGGGATTACT 59.365 55.000 0.00 0.00 45.67 2.24
2607 2921 3.218974 TCCCTCTGTCCGGGATTAC 57.781 57.895 0.00 0.00 45.67 1.89
2612 2926 0.186386 ATCTACTCCCTCTGTCCGGG 59.814 60.000 0.00 0.00 43.38 5.73
2613 2927 1.133761 TCATCTACTCCCTCTGTCCGG 60.134 57.143 0.00 0.00 0.00 5.14
2614 2928 2.350057 TCATCTACTCCCTCTGTCCG 57.650 55.000 0.00 0.00 0.00 4.79
2615 2929 5.363939 CAAATTCATCTACTCCCTCTGTCC 58.636 45.833 0.00 0.00 0.00 4.02
2616 2930 5.104735 ACCAAATTCATCTACTCCCTCTGTC 60.105 44.000 0.00 0.00 0.00 3.51
2617 2931 4.785376 ACCAAATTCATCTACTCCCTCTGT 59.215 41.667 0.00 0.00 0.00 3.41
2618 2932 5.121811 CACCAAATTCATCTACTCCCTCTG 58.878 45.833 0.00 0.00 0.00 3.35
2619 2933 4.384647 GCACCAAATTCATCTACTCCCTCT 60.385 45.833 0.00 0.00 0.00 3.69
2620 2934 3.879892 GCACCAAATTCATCTACTCCCTC 59.120 47.826 0.00 0.00 0.00 4.30
2621 2935 3.266772 TGCACCAAATTCATCTACTCCCT 59.733 43.478 0.00 0.00 0.00 4.20
2622 2936 3.620488 TGCACCAAATTCATCTACTCCC 58.380 45.455 0.00 0.00 0.00 4.30
2623 2937 4.641989 ACATGCACCAAATTCATCTACTCC 59.358 41.667 0.00 0.00 0.00 3.85
2624 2938 5.824904 ACATGCACCAAATTCATCTACTC 57.175 39.130 0.00 0.00 0.00 2.59
2625 2939 5.477984 ACAACATGCACCAAATTCATCTACT 59.522 36.000 0.00 0.00 0.00 2.57
2626 2940 5.713025 ACAACATGCACCAAATTCATCTAC 58.287 37.500 0.00 0.00 0.00 2.59
2627 2941 5.981088 ACAACATGCACCAAATTCATCTA 57.019 34.783 0.00 0.00 0.00 1.98
2628 2942 4.877378 ACAACATGCACCAAATTCATCT 57.123 36.364 0.00 0.00 0.00 2.90
2629 2943 5.236911 ACAAACAACATGCACCAAATTCATC 59.763 36.000 0.00 0.00 0.00 2.92
2630 2944 5.124645 ACAAACAACATGCACCAAATTCAT 58.875 33.333 0.00 0.00 0.00 2.57
2631 2945 4.511527 ACAAACAACATGCACCAAATTCA 58.488 34.783 0.00 0.00 0.00 2.57
2632 2946 5.752955 ACTACAAACAACATGCACCAAATTC 59.247 36.000 0.00 0.00 0.00 2.17
2633 2947 5.669477 ACTACAAACAACATGCACCAAATT 58.331 33.333 0.00 0.00 0.00 1.82
2634 2948 5.275067 ACTACAAACAACATGCACCAAAT 57.725 34.783 0.00 0.00 0.00 2.32
2635 2949 4.727507 ACTACAAACAACATGCACCAAA 57.272 36.364 0.00 0.00 0.00 3.28
2636 2950 4.727507 AACTACAAACAACATGCACCAA 57.272 36.364 0.00 0.00 0.00 3.67
2637 2951 4.727507 AAACTACAAACAACATGCACCA 57.272 36.364 0.00 0.00 0.00 4.17
2638 2952 8.980143 ATATAAAACTACAAACAACATGCACC 57.020 30.769 0.00 0.00 0.00 5.01
2675 2989 9.046296 GGACGAACTCATCTACAATATTGAATT 57.954 33.333 22.16 2.37 0.00 2.17
2676 2990 8.424918 AGGACGAACTCATCTACAATATTGAAT 58.575 33.333 22.16 9.23 0.00 2.57
2677 2991 7.782049 AGGACGAACTCATCTACAATATTGAA 58.218 34.615 22.16 7.34 0.00 2.69
2678 2992 7.348080 AGGACGAACTCATCTACAATATTGA 57.652 36.000 22.16 5.10 0.00 2.57
2679 2993 9.133627 CATAGGACGAACTCATCTACAATATTG 57.866 37.037 14.01 14.01 0.00 1.90
2680 2994 9.078990 TCATAGGACGAACTCATCTACAATATT 57.921 33.333 0.00 0.00 0.00 1.28
2681 2995 8.637196 TCATAGGACGAACTCATCTACAATAT 57.363 34.615 0.00 0.00 0.00 1.28
2682 2996 8.637196 ATCATAGGACGAACTCATCTACAATA 57.363 34.615 0.00 0.00 0.00 1.90
2683 2997 6.961360 TCATAGGACGAACTCATCTACAAT 57.039 37.500 0.00 0.00 0.00 2.71
2684 2998 6.961360 ATCATAGGACGAACTCATCTACAA 57.039 37.500 0.00 0.00 0.00 2.41
2685 2999 6.773200 AGAATCATAGGACGAACTCATCTACA 59.227 38.462 0.00 0.00 0.00 2.74
2686 3000 7.209471 AGAATCATAGGACGAACTCATCTAC 57.791 40.000 0.00 0.00 0.00 2.59
2687 3001 7.040340 GGAAGAATCATAGGACGAACTCATCTA 60.040 40.741 0.00 0.00 0.00 1.98
2688 3002 6.239176 GGAAGAATCATAGGACGAACTCATCT 60.239 42.308 0.00 0.00 0.00 2.90
2689 3003 5.923684 GGAAGAATCATAGGACGAACTCATC 59.076 44.000 0.00 0.00 0.00 2.92
2690 3004 5.508153 CGGAAGAATCATAGGACGAACTCAT 60.508 44.000 0.00 0.00 0.00 2.90
2691 3005 4.202020 CGGAAGAATCATAGGACGAACTCA 60.202 45.833 0.00 0.00 0.00 3.41
2692 3006 4.036498 TCGGAAGAATCATAGGACGAACTC 59.964 45.833 0.00 0.00 37.03 3.01
2693 3007 3.952323 TCGGAAGAATCATAGGACGAACT 59.048 43.478 0.00 0.00 37.03 3.01
2694 3008 4.303086 TCGGAAGAATCATAGGACGAAC 57.697 45.455 0.00 0.00 37.03 3.95
2708 3022 9.394767 TTGAATATCAAATTCTTCATCGGAAGA 57.605 29.630 3.17 3.17 44.10 2.87
2709 3023 9.661187 CTTGAATATCAAATTCTTCATCGGAAG 57.339 33.333 0.00 0.00 42.60 3.46
2710 3024 9.394767 TCTTGAATATCAAATTCTTCATCGGAA 57.605 29.630 0.02 0.00 35.73 4.30
2711 3025 8.962884 TCTTGAATATCAAATTCTTCATCGGA 57.037 30.769 0.02 0.00 35.73 4.55
2712 3026 8.288208 CCTCTTGAATATCAAATTCTTCATCGG 58.712 37.037 0.02 0.00 35.73 4.18
2713 3027 9.049523 TCCTCTTGAATATCAAATTCTTCATCG 57.950 33.333 0.02 0.00 35.73 3.84
2715 3029 9.917887 ACTCCTCTTGAATATCAAATTCTTCAT 57.082 29.630 0.02 0.00 35.73 2.57
2718 3032 9.844257 CCTACTCCTCTTGAATATCAAATTCTT 57.156 33.333 0.02 0.00 35.73 2.52
2719 3033 9.218525 TCCTACTCCTCTTGAATATCAAATTCT 57.781 33.333 0.02 0.00 35.73 2.40
2720 3034 9.267084 GTCCTACTCCTCTTGAATATCAAATTC 57.733 37.037 0.00 0.00 35.73 2.17
2721 3035 8.214364 GGTCCTACTCCTCTTGAATATCAAATT 58.786 37.037 0.00 0.00 35.73 1.82
2722 3036 7.570607 AGGTCCTACTCCTCTTGAATATCAAAT 59.429 37.037 0.00 0.00 35.73 2.32
2723 3037 6.903534 AGGTCCTACTCCTCTTGAATATCAAA 59.096 38.462 0.00 0.00 35.73 2.69
2724 3038 6.444704 AGGTCCTACTCCTCTTGAATATCAA 58.555 40.000 0.00 0.00 34.79 2.57
2725 3039 6.031964 AGGTCCTACTCCTCTTGAATATCA 57.968 41.667 0.00 0.00 0.00 2.15
2726 3040 6.740122 GCAAGGTCCTACTCCTCTTGAATATC 60.740 46.154 0.00 0.00 37.57 1.63
2727 3041 5.071115 GCAAGGTCCTACTCCTCTTGAATAT 59.929 44.000 0.00 0.00 37.57 1.28
2728 3042 4.406003 GCAAGGTCCTACTCCTCTTGAATA 59.594 45.833 0.00 0.00 37.57 1.75
2729 3043 3.198853 GCAAGGTCCTACTCCTCTTGAAT 59.801 47.826 0.00 0.00 37.57 2.57
2730 3044 2.567615 GCAAGGTCCTACTCCTCTTGAA 59.432 50.000 0.00 0.00 37.57 2.69
2731 3045 2.180276 GCAAGGTCCTACTCCTCTTGA 58.820 52.381 0.00 0.00 37.57 3.02
2732 3046 1.902508 TGCAAGGTCCTACTCCTCTTG 59.097 52.381 0.00 0.00 38.18 3.02
2733 3047 2.327325 TGCAAGGTCCTACTCCTCTT 57.673 50.000 0.00 0.00 33.76 2.85
2734 3048 2.327325 TTGCAAGGTCCTACTCCTCT 57.673 50.000 0.00 0.00 33.76 3.69
2735 3049 2.501723 TCATTGCAAGGTCCTACTCCTC 59.498 50.000 11.36 0.00 33.76 3.71
2736 3050 2.551270 TCATTGCAAGGTCCTACTCCT 58.449 47.619 11.36 0.00 36.81 3.69
2737 3051 3.471680 GATCATTGCAAGGTCCTACTCC 58.528 50.000 11.36 0.00 0.00 3.85
2738 3052 3.135530 AGGATCATTGCAAGGTCCTACTC 59.864 47.826 24.22 9.41 37.53 2.59
2739 3053 3.118531 AGGATCATTGCAAGGTCCTACT 58.881 45.455 24.22 10.40 37.53 2.57
2740 3054 3.567478 AGGATCATTGCAAGGTCCTAC 57.433 47.619 24.22 8.65 37.53 3.18
2741 3055 3.071602 GCTAGGATCATTGCAAGGTCCTA 59.928 47.826 26.27 26.27 39.81 2.94
2742 3056 2.158696 GCTAGGATCATTGCAAGGTCCT 60.159 50.000 26.68 26.68 41.85 3.85
2743 3057 2.158696 AGCTAGGATCATTGCAAGGTCC 60.159 50.000 15.71 18.80 0.00 4.46
2744 3058 3.205784 AGCTAGGATCATTGCAAGGTC 57.794 47.619 15.71 7.91 0.00 3.85
2745 3059 4.649692 CATAGCTAGGATCATTGCAAGGT 58.350 43.478 15.71 0.95 0.00 3.50
2746 3060 3.439476 GCATAGCTAGGATCATTGCAAGG 59.561 47.826 15.71 4.34 0.00 3.61
2747 3061 4.070009 TGCATAGCTAGGATCATTGCAAG 58.930 43.478 15.71 6.25 35.85 4.01
2748 3062 3.817084 GTGCATAGCTAGGATCATTGCAA 59.183 43.478 15.46 0.00 39.97 4.08
2749 3063 3.405831 GTGCATAGCTAGGATCATTGCA 58.594 45.455 15.71 10.62 36.37 4.08
2750 3064 2.414481 CGTGCATAGCTAGGATCATTGC 59.586 50.000 10.11 7.92 0.00 3.56
2751 3065 3.657634 ACGTGCATAGCTAGGATCATTG 58.342 45.455 10.11 0.00 0.00 2.82
2752 3066 3.321968 TGACGTGCATAGCTAGGATCATT 59.678 43.478 10.11 0.00 0.00 2.57
2753 3067 2.893489 TGACGTGCATAGCTAGGATCAT 59.107 45.455 10.11 0.00 0.00 2.45
2754 3068 2.306847 TGACGTGCATAGCTAGGATCA 58.693 47.619 10.11 3.98 0.00 2.92
2755 3069 3.371102 TTGACGTGCATAGCTAGGATC 57.629 47.619 10.11 1.34 0.00 3.36
2756 3070 5.468540 TTATTGACGTGCATAGCTAGGAT 57.531 39.130 10.11 0.00 0.00 3.24
2757 3071 4.929819 TTATTGACGTGCATAGCTAGGA 57.070 40.909 10.11 0.00 0.00 2.94
2758 3072 5.984233 TTTTATTGACGTGCATAGCTAGG 57.016 39.130 0.00 0.00 0.00 3.02
2759 3073 5.904080 GCTTTTTATTGACGTGCATAGCTAG 59.096 40.000 0.00 0.00 0.00 3.42
2760 3074 5.220777 GGCTTTTTATTGACGTGCATAGCTA 60.221 40.000 0.00 0.00 0.00 3.32
2761 3075 4.438744 GGCTTTTTATTGACGTGCATAGCT 60.439 41.667 0.00 0.00 0.00 3.32
2762 3076 3.791353 GGCTTTTTATTGACGTGCATAGC 59.209 43.478 0.00 0.00 0.00 2.97
2763 3077 4.980590 TGGCTTTTTATTGACGTGCATAG 58.019 39.130 0.00 0.00 0.00 2.23
2764 3078 5.378292 TTGGCTTTTTATTGACGTGCATA 57.622 34.783 0.00 0.00 0.00 3.14
2765 3079 3.932545 TGGCTTTTTATTGACGTGCAT 57.067 38.095 0.00 0.00 0.00 3.96
2766 3080 3.717400 TTGGCTTTTTATTGACGTGCA 57.283 38.095 0.00 0.00 0.00 4.57
2767 3081 4.268884 TGTTTTGGCTTTTTATTGACGTGC 59.731 37.500 0.00 0.00 0.00 5.34
2768 3082 5.957910 TGTTTTGGCTTTTTATTGACGTG 57.042 34.783 0.00 0.00 0.00 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.