Multiple sequence alignment - TraesCS4A01G066900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G066900 chr4A 100.000 4496 0 0 1572 6067 64151251 64146756 0.000000e+00 8303.0
1 TraesCS4A01G066900 chr4A 100.000 1249 0 0 1 1249 64152822 64151574 0.000000e+00 2307.0
2 TraesCS4A01G066900 chr4A 82.796 279 35 5 129 394 711904245 711904523 2.830000e-58 237.0
3 TraesCS4A01G066900 chr4A 94.000 50 1 1 4336 4383 64148455 64148406 2.350000e-09 75.0
4 TraesCS4A01G066900 chr4A 94.000 50 1 1 4368 4417 64148487 64148440 2.350000e-09 75.0
5 TraesCS4A01G066900 chr4B 96.588 3107 65 19 1572 4637 506148281 506145175 0.000000e+00 5112.0
6 TraesCS4A01G066900 chr4B 97.250 800 22 0 4635 5434 506145052 506144253 0.000000e+00 1356.0
7 TraesCS4A01G066900 chr4B 95.581 430 11 6 822 1249 506148727 506148304 0.000000e+00 682.0
8 TraesCS4A01G066900 chr4B 88.048 502 55 5 257 757 602874837 602874340 1.880000e-164 590.0
9 TraesCS4A01G066900 chr4B 93.636 330 10 5 5743 6067 506143634 506143311 3.290000e-132 483.0
10 TraesCS4A01G066900 chr4B 84.010 394 46 7 353 734 9941420 9941808 4.470000e-96 363.0
11 TraesCS4A01G066900 chr4B 92.893 197 11 1 5518 5714 506144071 506143878 3.580000e-72 283.0
12 TraesCS4A01G066900 chr4B 100.000 43 0 0 5515 5557 506144112 506144070 5.040000e-11 80.5
13 TraesCS4A01G066900 chr4B 88.235 68 5 2 4319 4383 506145466 506145399 1.810000e-10 78.7
14 TraesCS4A01G066900 chr4D 97.439 2811 62 4 1579 4383 409636361 409639167 0.000000e+00 4783.0
15 TraesCS4A01G066900 chr4D 96.721 854 24 2 4581 5434 409639256 409640105 0.000000e+00 1419.0
16 TraesCS4A01G066900 chr4D 95.031 322 10 1 5743 6064 409640561 409640876 9.080000e-138 501.0
17 TraesCS4A01G066900 chr4D 93.857 293 12 3 807 1093 409635673 409635965 2.600000e-118 436.0
18 TraesCS4A01G066900 chr4D 93.925 214 10 1 5515 5728 409640248 409640458 2.730000e-83 320.0
19 TraesCS4A01G066900 chr4D 91.241 137 8 2 4368 4500 409639118 409639254 3.730000e-42 183.0
20 TraesCS4A01G066900 chr4D 89.655 87 5 4 5433 5515 409640136 409640222 2.310000e-19 108.0
21 TraesCS4A01G066900 chr6A 87.557 442 40 5 323 757 559728109 559727676 1.170000e-136 497.0
22 TraesCS4A01G066900 chr6A 91.304 138 12 0 163 300 559728753 559728616 8.030000e-44 189.0
23 TraesCS4A01G066900 chr1B 88.547 358 31 4 374 722 6239183 6239539 5.620000e-115 425.0
24 TraesCS4A01G066900 chr1B 90.252 318 23 2 374 683 7485114 7485431 5.660000e-110 409.0
25 TraesCS4A01G066900 chr1B 83.480 454 56 8 237 683 583440042 583440483 7.320000e-109 405.0
26 TraesCS4A01G066900 chr1B 84.726 419 47 7 323 734 526247876 526248284 2.630000e-108 403.0
27 TraesCS4A01G066900 chr1B 89.855 138 14 0 163 300 526247213 526247350 1.740000e-40 178.0
28 TraesCS4A01G066900 chr7A 88.923 325 24 11 445 763 34221023 34220705 2.050000e-104 390.0
29 TraesCS4A01G066900 chr7A 88.934 244 25 2 512 754 685864059 685864301 3.550000e-77 300.0
30 TraesCS4A01G066900 chr5A 88.328 317 31 6 442 754 576084069 576084383 5.740000e-100 375.0
31 TraesCS4A01G066900 chr1A 89.377 273 28 1 483 754 555841402 555841674 5.820000e-90 342.0
32 TraesCS4A01G066900 chr1A 84.586 266 34 6 490 754 41739473 41739732 2.170000e-64 257.0
33 TraesCS4A01G066900 chr3B 82.060 301 41 3 129 416 8885101 8884801 1.690000e-60 244.0
34 TraesCS4A01G066900 chr3B 81.164 292 40 7 129 406 784686355 784686645 2.850000e-53 220.0
35 TraesCS4A01G066900 chr3B 83.260 227 23 10 172 384 299594154 299593929 1.730000e-45 195.0
36 TraesCS4A01G066900 chr2B 83.154 279 34 5 129 394 748199160 748199438 6.080000e-60 243.0
37 TraesCS4A01G066900 chr3A 81.395 301 42 8 129 416 434426220 434425921 3.660000e-57 233.0
38 TraesCS4A01G066900 chr5D 92.969 128 9 0 163 290 50859619 50859746 2.890000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G066900 chr4A 64146756 64152822 6066 True 2690.000000 8303 97.000000 1 6067 4 chr4A.!!$R1 6066
1 TraesCS4A01G066900 chr4B 506143311 506148727 5416 True 1153.600000 5112 94.883286 822 6067 7 chr4B.!!$R2 5245
2 TraesCS4A01G066900 chr4D 409635673 409640876 5203 False 1107.142857 4783 93.981286 807 6064 7 chr4D.!!$F1 5257
3 TraesCS4A01G066900 chr6A 559727676 559728753 1077 True 343.000000 497 89.430500 163 757 2 chr6A.!!$R1 594
4 TraesCS4A01G066900 chr1B 526247213 526248284 1071 False 290.500000 403 87.290500 163 734 2 chr1B.!!$F4 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 458 0.031414 GCTAGGGTTAGGGTGGAGGA 60.031 60.000 0.00 0.0 0.00 3.71 F
661 674 0.106469 CAGATCCTCCCACCTCTCGA 60.106 60.000 0.00 0.0 0.00 4.04 F
718 731 0.108615 CGGCCGAGAATCACTGAACT 60.109 55.000 24.07 0.0 33.17 3.01 F
775 788 0.162933 TTTGATTTCGCGAGCACGAC 59.837 50.000 9.59 0.0 42.78 4.34 F
785 798 0.386858 CGAGCACGACGAGAAAGGAA 60.387 55.000 0.00 0.0 42.66 3.36 F
2867 3129 0.696501 AACGGCCCTGAGGTATGTTT 59.303 50.000 0.00 0.0 34.57 2.83 F
2917 3179 1.689813 TGTGAAGGCGAGGTTTACAGA 59.310 47.619 0.00 0.0 0.00 3.41 F
3588 3856 2.626266 ACCATGACGTGACTTCACACTA 59.374 45.455 9.94 0.0 46.75 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1902 1921 2.048127 GTGTCGGTGTGGCTCCTC 60.048 66.667 0.00 0.00 0.00 3.71 R
2628 2890 2.846206 AGCTTCCTCATGGATGTGGTAA 59.154 45.455 7.44 1.87 42.81 2.85 R
2823 3085 1.276138 ACTGATGGCTCGTTCATGTCA 59.724 47.619 0.00 0.00 0.00 3.58 R
2844 3106 0.541863 ATACCTCAGGGCCGTTGAAG 59.458 55.000 9.55 6.51 35.63 3.02 R
2886 3148 3.544684 TCGCCTTCACAAGATAATGCAT 58.455 40.909 0.00 0.00 0.00 3.96 R
4048 4349 2.708861 TGACACACTTCCCTTGTATGGT 59.291 45.455 0.00 0.00 0.00 3.55 R
4406 4709 3.173965 AGGAGCTAGCTAAGGTTCACAA 58.826 45.455 19.38 0.00 35.60 3.33 R
5645 6178 1.143183 GGGCTGAATGCATTGCCTG 59.857 57.895 29.57 16.82 44.36 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
23 24 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
24 25 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
25 26 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
26 27 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
27 28 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
28 29 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
29 30 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
30 31 4.877773 AGAGAGAGAGAGAGAGAGAGAGT 58.122 47.826 0.00 0.00 0.00 3.24
31 32 4.648762 AGAGAGAGAGAGAGAGAGAGAGTG 59.351 50.000 0.00 0.00 0.00 3.51
32 33 4.614475 AGAGAGAGAGAGAGAGAGAGTGA 58.386 47.826 0.00 0.00 0.00 3.41
33 34 4.648762 AGAGAGAGAGAGAGAGAGAGTGAG 59.351 50.000 0.00 0.00 0.00 3.51
34 35 3.708631 AGAGAGAGAGAGAGAGAGTGAGG 59.291 52.174 0.00 0.00 0.00 3.86
35 36 3.452627 GAGAGAGAGAGAGAGAGTGAGGT 59.547 52.174 0.00 0.00 0.00 3.85
36 37 4.620723 AGAGAGAGAGAGAGAGTGAGGTA 58.379 47.826 0.00 0.00 0.00 3.08
37 38 4.651503 AGAGAGAGAGAGAGAGTGAGGTAG 59.348 50.000 0.00 0.00 0.00 3.18
38 39 3.711704 AGAGAGAGAGAGAGTGAGGTAGG 59.288 52.174 0.00 0.00 0.00 3.18
39 40 2.777692 AGAGAGAGAGAGTGAGGTAGGG 59.222 54.545 0.00 0.00 0.00 3.53
40 41 2.775384 GAGAGAGAGAGTGAGGTAGGGA 59.225 54.545 0.00 0.00 0.00 4.20
41 42 2.777692 AGAGAGAGAGTGAGGTAGGGAG 59.222 54.545 0.00 0.00 0.00 4.30
42 43 1.850345 AGAGAGAGTGAGGTAGGGAGG 59.150 57.143 0.00 0.00 0.00 4.30
43 44 0.930726 AGAGAGTGAGGTAGGGAGGG 59.069 60.000 0.00 0.00 0.00 4.30
44 45 0.927767 GAGAGTGAGGTAGGGAGGGA 59.072 60.000 0.00 0.00 0.00 4.20
45 46 1.288335 GAGAGTGAGGTAGGGAGGGAA 59.712 57.143 0.00 0.00 0.00 3.97
46 47 1.722851 AGAGTGAGGTAGGGAGGGAAA 59.277 52.381 0.00 0.00 0.00 3.13
47 48 2.112190 GAGTGAGGTAGGGAGGGAAAG 58.888 57.143 0.00 0.00 0.00 2.62
48 49 1.205055 GTGAGGTAGGGAGGGAAAGG 58.795 60.000 0.00 0.00 0.00 3.11
49 50 0.044244 TGAGGTAGGGAGGGAAAGGG 59.956 60.000 0.00 0.00 0.00 3.95
50 51 0.342313 GAGGTAGGGAGGGAAAGGGA 59.658 60.000 0.00 0.00 0.00 4.20
51 52 0.343726 AGGTAGGGAGGGAAAGGGAG 59.656 60.000 0.00 0.00 0.00 4.30
52 53 0.342313 GGTAGGGAGGGAAAGGGAGA 59.658 60.000 0.00 0.00 0.00 3.71
53 54 1.693083 GGTAGGGAGGGAAAGGGAGAG 60.693 61.905 0.00 0.00 0.00 3.20
54 55 0.642710 TAGGGAGGGAAAGGGAGAGG 59.357 60.000 0.00 0.00 0.00 3.69
55 56 1.162951 AGGGAGGGAAAGGGAGAGGA 61.163 60.000 0.00 0.00 0.00 3.71
56 57 0.253207 GGGAGGGAAAGGGAGAGGAA 60.253 60.000 0.00 0.00 0.00 3.36
57 58 0.913205 GGAGGGAAAGGGAGAGGAAC 59.087 60.000 0.00 0.00 0.00 3.62
58 59 0.913205 GAGGGAAAGGGAGAGGAACC 59.087 60.000 0.00 0.00 0.00 3.62
59 60 0.498685 AGGGAAAGGGAGAGGAACCT 59.501 55.000 0.00 0.00 39.21 3.50
60 61 0.621082 GGGAAAGGGAGAGGAACCTG 59.379 60.000 0.00 0.00 37.13 4.00
61 62 0.034960 GGAAAGGGAGAGGAACCTGC 60.035 60.000 0.00 0.00 37.13 4.85
62 63 0.391793 GAAAGGGAGAGGAACCTGCG 60.392 60.000 0.00 0.00 37.13 5.18
63 64 1.842381 AAAGGGAGAGGAACCTGCGG 61.842 60.000 0.00 0.00 37.13 5.69
64 65 4.475135 GGGAGAGGAACCTGCGGC 62.475 72.222 0.00 0.00 0.00 6.53
65 66 3.706373 GGAGAGGAACCTGCGGCA 61.706 66.667 1.29 1.29 0.00 5.69
66 67 2.586792 GAGAGGAACCTGCGGCAT 59.413 61.111 1.75 0.00 0.00 4.40
67 68 1.686325 GGAGAGGAACCTGCGGCATA 61.686 60.000 1.75 0.00 0.00 3.14
68 69 0.249657 GAGAGGAACCTGCGGCATAG 60.250 60.000 1.75 0.18 0.00 2.23
69 70 1.227674 GAGGAACCTGCGGCATAGG 60.228 63.158 1.75 4.72 41.22 2.57
70 71 2.902343 GGAACCTGCGGCATAGGC 60.902 66.667 1.75 0.00 38.96 3.93
71 72 2.124736 GAACCTGCGGCATAGGCA 60.125 61.111 1.75 0.00 43.71 4.75
76 77 2.187685 TGCGGCATAGGCAGTGAG 59.812 61.111 0.15 0.00 43.71 3.51
77 78 2.358372 TGCGGCATAGGCAGTGAGA 61.358 57.895 0.15 0.00 43.71 3.27
78 79 1.593750 GCGGCATAGGCAGTGAGAG 60.594 63.158 0.15 0.00 43.71 3.20
79 80 1.068753 CGGCATAGGCAGTGAGAGG 59.931 63.158 0.15 0.00 43.71 3.69
80 81 1.395045 CGGCATAGGCAGTGAGAGGA 61.395 60.000 0.15 0.00 43.71 3.71
81 82 0.833287 GGCATAGGCAGTGAGAGGAA 59.167 55.000 0.15 0.00 43.71 3.36
82 83 1.474143 GGCATAGGCAGTGAGAGGAAC 60.474 57.143 0.15 0.00 43.71 3.62
83 84 1.208052 GCATAGGCAGTGAGAGGAACA 59.792 52.381 0.00 0.00 40.72 3.18
84 85 2.898705 CATAGGCAGTGAGAGGAACAC 58.101 52.381 0.00 0.00 38.38 3.32
85 86 0.888619 TAGGCAGTGAGAGGAACACG 59.111 55.000 0.00 0.00 42.25 4.49
86 87 0.827925 AGGCAGTGAGAGGAACACGA 60.828 55.000 0.00 0.00 42.25 4.35
87 88 0.033504 GGCAGTGAGAGGAACACGAA 59.966 55.000 0.00 0.00 42.25 3.85
88 89 1.423395 GCAGTGAGAGGAACACGAAG 58.577 55.000 0.00 0.00 42.25 3.79
89 90 1.937108 GCAGTGAGAGGAACACGAAGG 60.937 57.143 0.00 0.00 42.25 3.46
90 91 1.613925 CAGTGAGAGGAACACGAAGGA 59.386 52.381 0.00 0.00 42.25 3.36
91 92 1.889829 AGTGAGAGGAACACGAAGGAG 59.110 52.381 0.00 0.00 42.25 3.69
92 93 1.887198 GTGAGAGGAACACGAAGGAGA 59.113 52.381 0.00 0.00 0.00 3.71
93 94 2.296471 GTGAGAGGAACACGAAGGAGAA 59.704 50.000 0.00 0.00 0.00 2.87
94 95 2.558795 TGAGAGGAACACGAAGGAGAAG 59.441 50.000 0.00 0.00 0.00 2.85
95 96 1.896465 AGAGGAACACGAAGGAGAAGG 59.104 52.381 0.00 0.00 0.00 3.46
96 97 0.977395 AGGAACACGAAGGAGAAGGG 59.023 55.000 0.00 0.00 0.00 3.95
97 98 0.036294 GGAACACGAAGGAGAAGGGG 60.036 60.000 0.00 0.00 0.00 4.79
98 99 0.685660 GAACACGAAGGAGAAGGGGT 59.314 55.000 0.00 0.00 0.00 4.95
99 100 0.396811 AACACGAAGGAGAAGGGGTG 59.603 55.000 0.00 0.00 0.00 4.61
100 101 1.376037 CACGAAGGAGAAGGGGTGC 60.376 63.158 0.00 0.00 0.00 5.01
101 102 1.841556 ACGAAGGAGAAGGGGTGCA 60.842 57.895 0.00 0.00 0.00 4.57
102 103 1.078848 CGAAGGAGAAGGGGTGCAG 60.079 63.158 0.00 0.00 0.00 4.41
103 104 1.831652 CGAAGGAGAAGGGGTGCAGT 61.832 60.000 0.00 0.00 0.00 4.40
104 105 0.322008 GAAGGAGAAGGGGTGCAGTG 60.322 60.000 0.00 0.00 0.00 3.66
105 106 1.062488 AAGGAGAAGGGGTGCAGTGT 61.062 55.000 0.00 0.00 0.00 3.55
106 107 1.302832 GGAGAAGGGGTGCAGTGTG 60.303 63.158 0.00 0.00 0.00 3.82
107 108 1.302832 GAGAAGGGGTGCAGTGTGG 60.303 63.158 0.00 0.00 0.00 4.17
108 109 2.985847 GAAGGGGTGCAGTGTGGC 60.986 66.667 0.00 0.00 0.00 5.01
109 110 4.954970 AAGGGGTGCAGTGTGGCG 62.955 66.667 0.00 0.00 36.28 5.69
124 125 2.744709 GCGCCGGCAAAGGAAGTA 60.745 61.111 28.98 0.00 39.62 2.24
125 126 3.035576 GCGCCGGCAAAGGAAGTAC 62.036 63.158 28.98 0.00 39.62 2.73
126 127 2.396157 CGCCGGCAAAGGAAGTACC 61.396 63.158 28.98 0.00 39.35 3.34
127 128 2.396157 GCCGGCAAAGGAAGTACCG 61.396 63.158 24.80 0.00 44.74 4.02
128 129 3.884900 CGGCAAAGGAAGTACCGG 58.115 61.111 0.00 0.00 44.74 5.28
129 130 1.294138 CGGCAAAGGAAGTACCGGA 59.706 57.895 9.46 0.00 44.74 5.14
130 131 1.017701 CGGCAAAGGAAGTACCGGAC 61.018 60.000 9.46 1.42 44.74 4.79
131 132 1.017701 GGCAAAGGAAGTACCGGACG 61.018 60.000 9.46 0.00 44.74 4.79
132 133 1.632948 GCAAAGGAAGTACCGGACGC 61.633 60.000 9.46 0.00 44.74 5.19
133 134 0.320073 CAAAGGAAGTACCGGACGCA 60.320 55.000 9.46 0.00 44.74 5.24
134 135 0.037605 AAAGGAAGTACCGGACGCAG 60.038 55.000 9.46 0.00 44.74 5.18
135 136 2.502692 AAGGAAGTACCGGACGCAGC 62.503 60.000 9.46 0.00 44.74 5.25
136 137 2.879462 GAAGTACCGGACGCAGCG 60.879 66.667 14.82 14.82 0.00 5.18
160 161 4.176752 CCGTTAGGGGCCAGCCTC 62.177 72.222 4.39 4.05 36.66 4.70
161 162 4.530857 CGTTAGGGGCCAGCCTCG 62.531 72.222 4.39 0.00 42.67 4.63
198 199 4.988598 CCAACGCGCTGACAGGGT 62.989 66.667 19.53 0.10 36.29 4.34
282 283 4.087892 CCACTGGCCACGGGAGAG 62.088 72.222 11.81 0.00 0.00 3.20
283 284 2.997315 CACTGGCCACGGGAGAGA 60.997 66.667 0.00 0.00 0.00 3.10
321 333 1.626356 CGGCAGGGATGGAAAGAGGA 61.626 60.000 0.00 0.00 0.00 3.71
327 339 0.178978 GGATGGAAAGAGGATGGGGC 60.179 60.000 0.00 0.00 0.00 5.80
329 341 1.999634 ATGGAAAGAGGATGGGGCCG 62.000 60.000 0.00 0.00 0.00 6.13
330 342 2.517166 GAAAGAGGATGGGGCCGC 60.517 66.667 14.01 14.01 0.00 6.53
331 343 4.489771 AAAGAGGATGGGGCCGCG 62.490 66.667 15.95 0.00 32.50 6.46
348 360 4.280019 GGTGGGGTGGTGGTGGAC 62.280 72.222 0.00 0.00 0.00 4.02
349 361 4.636435 GTGGGGTGGTGGTGGACG 62.636 72.222 0.00 0.00 0.00 4.79
350 362 4.882396 TGGGGTGGTGGTGGACGA 62.882 66.667 0.00 0.00 0.00 4.20
351 363 4.324991 GGGGTGGTGGTGGACGAC 62.325 72.222 0.00 0.00 32.68 4.34
352 364 4.675029 GGGTGGTGGTGGACGACG 62.675 72.222 0.00 0.00 34.21 5.12
353 365 4.675029 GGTGGTGGTGGACGACGG 62.675 72.222 0.00 0.00 34.21 4.79
405 417 4.821589 GCGGGCTCGGTGAAGGAG 62.822 72.222 8.71 0.00 36.79 3.69
406 418 3.068691 CGGGCTCGGTGAAGGAGA 61.069 66.667 0.00 0.00 33.27 3.71
407 419 2.579738 GGGCTCGGTGAAGGAGAC 59.420 66.667 0.00 0.00 38.89 3.36
408 420 2.182030 GGCTCGGTGAAGGAGACG 59.818 66.667 0.00 0.00 33.27 4.18
409 421 2.182030 GCTCGGTGAAGGAGACGG 59.818 66.667 0.00 0.00 33.27 4.79
410 422 2.182030 CTCGGTGAAGGAGACGGC 59.818 66.667 0.00 0.00 33.27 5.68
411 423 3.685214 CTCGGTGAAGGAGACGGCG 62.685 68.421 4.80 4.80 33.27 6.46
412 424 3.744719 CGGTGAAGGAGACGGCGA 61.745 66.667 16.62 0.00 0.00 5.54
413 425 2.126031 GGTGAAGGAGACGGCGAC 60.126 66.667 16.62 7.87 0.00 5.19
430 442 4.015406 CGGTGTGGGGTGCTGCTA 62.015 66.667 0.00 0.00 0.00 3.49
431 443 2.045926 GGTGTGGGGTGCTGCTAG 60.046 66.667 0.00 0.00 0.00 3.42
432 444 2.045926 GTGTGGGGTGCTGCTAGG 60.046 66.667 0.00 0.00 0.00 3.02
433 445 3.329889 TGTGGGGTGCTGCTAGGG 61.330 66.667 0.00 0.00 0.00 3.53
434 446 3.330720 GTGGGGTGCTGCTAGGGT 61.331 66.667 0.00 0.00 0.00 4.34
435 447 2.531685 TGGGGTGCTGCTAGGGTT 60.532 61.111 0.00 0.00 0.00 4.11
436 448 1.229690 TGGGGTGCTGCTAGGGTTA 60.230 57.895 0.00 0.00 0.00 2.85
437 449 1.271840 TGGGGTGCTGCTAGGGTTAG 61.272 60.000 0.00 0.00 0.00 2.34
438 450 1.527370 GGGTGCTGCTAGGGTTAGG 59.473 63.158 0.00 0.00 0.00 2.69
439 451 1.527370 GGTGCTGCTAGGGTTAGGG 59.473 63.158 0.00 0.00 0.00 3.53
440 452 1.272554 GGTGCTGCTAGGGTTAGGGT 61.273 60.000 0.00 0.00 0.00 4.34
441 453 0.107654 GTGCTGCTAGGGTTAGGGTG 60.108 60.000 0.00 0.00 0.00 4.61
442 454 1.271840 TGCTGCTAGGGTTAGGGTGG 61.272 60.000 0.00 0.00 0.00 4.61
443 455 0.981277 GCTGCTAGGGTTAGGGTGGA 60.981 60.000 0.00 0.00 0.00 4.02
444 456 1.123928 CTGCTAGGGTTAGGGTGGAG 58.876 60.000 0.00 0.00 0.00 3.86
445 457 0.326238 TGCTAGGGTTAGGGTGGAGG 60.326 60.000 0.00 0.00 0.00 4.30
446 458 0.031414 GCTAGGGTTAGGGTGGAGGA 60.031 60.000 0.00 0.00 0.00 3.71
447 459 2.035331 GCTAGGGTTAGGGTGGAGGAG 61.035 61.905 0.00 0.00 0.00 3.69
448 460 0.640495 TAGGGTTAGGGTGGAGGAGG 59.360 60.000 0.00 0.00 0.00 4.30
449 461 2.376165 GGGTTAGGGTGGAGGAGGC 61.376 68.421 0.00 0.00 0.00 4.70
450 462 2.732619 GGTTAGGGTGGAGGAGGCG 61.733 68.421 0.00 0.00 0.00 5.52
451 463 1.988406 GTTAGGGTGGAGGAGGCGT 60.988 63.158 0.00 0.00 0.00 5.68
452 464 0.685458 GTTAGGGTGGAGGAGGCGTA 60.685 60.000 0.00 0.00 0.00 4.42
455 467 2.128507 GGGTGGAGGAGGCGTAGAG 61.129 68.421 0.00 0.00 0.00 2.43
457 469 1.076923 GTGGAGGAGGCGTAGAGGA 60.077 63.158 0.00 0.00 0.00 3.71
462 474 1.529713 GGAGGCGTAGAGGAGGAGG 60.530 68.421 0.00 0.00 0.00 4.30
466 478 3.070987 GCGTAGAGGAGGAGGGGGA 62.071 68.421 0.00 0.00 0.00 4.81
470 483 2.237751 TAGAGGAGGAGGGGGAGGGA 62.238 65.000 0.00 0.00 0.00 4.20
473 486 3.752167 GAGGAGGGGGAGGGACGA 61.752 72.222 0.00 0.00 0.00 4.20
512 525 3.902086 GGCGGCTAGGTCTCCGTC 61.902 72.222 0.00 2.24 46.79 4.79
513 526 3.138798 GCGGCTAGGTCTCCGTCA 61.139 66.667 8.10 0.00 46.79 4.35
514 527 2.799371 CGGCTAGGTCTCCGTCAC 59.201 66.667 0.00 0.00 40.72 3.67
515 528 2.044555 CGGCTAGGTCTCCGTCACA 61.045 63.158 0.00 0.00 40.72 3.58
516 529 1.810532 GGCTAGGTCTCCGTCACAG 59.189 63.158 0.00 0.00 0.00 3.66
517 530 1.668101 GGCTAGGTCTCCGTCACAGG 61.668 65.000 0.00 0.00 0.00 4.00
518 531 0.680280 GCTAGGTCTCCGTCACAGGA 60.680 60.000 0.00 0.00 38.80 3.86
534 547 4.789123 GAGCGCCCGGCCCTTTTA 62.789 66.667 2.29 0.00 45.17 1.52
535 548 4.123545 AGCGCCCGGCCCTTTTAT 62.124 61.111 2.29 0.00 45.17 1.40
536 549 2.203238 GCGCCCGGCCCTTTTATA 60.203 61.111 3.10 0.00 34.80 0.98
537 550 2.549198 GCGCCCGGCCCTTTTATAC 61.549 63.158 3.10 0.00 34.80 1.47
538 551 1.895231 CGCCCGGCCCTTTTATACC 60.895 63.158 3.10 0.00 0.00 2.73
539 552 1.535190 GCCCGGCCCTTTTATACCT 59.465 57.895 0.00 0.00 0.00 3.08
540 553 0.536687 GCCCGGCCCTTTTATACCTC 60.537 60.000 0.00 0.00 0.00 3.85
541 554 0.109913 CCCGGCCCTTTTATACCTCC 59.890 60.000 0.00 0.00 0.00 4.30
542 555 0.841289 CCGGCCCTTTTATACCTCCA 59.159 55.000 0.00 0.00 0.00 3.86
543 556 1.476291 CCGGCCCTTTTATACCTCCAC 60.476 57.143 0.00 0.00 0.00 4.02
544 557 1.476291 CGGCCCTTTTATACCTCCACC 60.476 57.143 0.00 0.00 0.00 4.61
545 558 1.567175 GGCCCTTTTATACCTCCACCA 59.433 52.381 0.00 0.00 0.00 4.17
546 559 2.651455 GCCCTTTTATACCTCCACCAC 58.349 52.381 0.00 0.00 0.00 4.16
547 560 2.914059 CCCTTTTATACCTCCACCACG 58.086 52.381 0.00 0.00 0.00 4.94
548 561 2.285977 CCTTTTATACCTCCACCACGC 58.714 52.381 0.00 0.00 0.00 5.34
549 562 1.931172 CTTTTATACCTCCACCACGCG 59.069 52.381 3.53 3.53 0.00 6.01
550 563 1.184431 TTTATACCTCCACCACGCGA 58.816 50.000 15.93 0.00 0.00 5.87
551 564 1.184431 TTATACCTCCACCACGCGAA 58.816 50.000 15.93 0.00 0.00 4.70
552 565 1.184431 TATACCTCCACCACGCGAAA 58.816 50.000 15.93 0.00 0.00 3.46
553 566 0.539986 ATACCTCCACCACGCGAAAT 59.460 50.000 15.93 0.00 0.00 2.17
554 567 0.390603 TACCTCCACCACGCGAAATG 60.391 55.000 15.93 7.23 0.00 2.32
555 568 1.375396 CCTCCACCACGCGAAATGA 60.375 57.895 15.93 1.17 0.00 2.57
556 569 1.635663 CCTCCACCACGCGAAATGAC 61.636 60.000 15.93 0.00 0.00 3.06
557 570 1.635663 CTCCACCACGCGAAATGACC 61.636 60.000 15.93 0.00 0.00 4.02
558 571 1.963855 CCACCACGCGAAATGACCA 60.964 57.895 15.93 0.00 0.00 4.02
559 572 1.511318 CCACCACGCGAAATGACCAA 61.511 55.000 15.93 0.00 0.00 3.67
560 573 0.309302 CACCACGCGAAATGACCAAA 59.691 50.000 15.93 0.00 0.00 3.28
561 574 1.025812 ACCACGCGAAATGACCAAAA 58.974 45.000 15.93 0.00 0.00 2.44
562 575 1.611491 ACCACGCGAAATGACCAAAAT 59.389 42.857 15.93 0.00 0.00 1.82
563 576 1.984990 CCACGCGAAATGACCAAAATG 59.015 47.619 15.93 0.00 0.00 2.32
564 577 1.386412 CACGCGAAATGACCAAAATGC 59.614 47.619 15.93 0.00 0.00 3.56
565 578 0.991344 CGCGAAATGACCAAAATGCC 59.009 50.000 0.00 0.00 0.00 4.40
566 579 1.358877 GCGAAATGACCAAAATGCCC 58.641 50.000 0.00 0.00 0.00 5.36
567 580 1.066929 GCGAAATGACCAAAATGCCCT 60.067 47.619 0.00 0.00 0.00 5.19
568 581 2.609350 CGAAATGACCAAAATGCCCTG 58.391 47.619 0.00 0.00 0.00 4.45
569 582 2.674747 CGAAATGACCAAAATGCCCTGG 60.675 50.000 0.00 0.00 38.77 4.45
571 584 1.269012 ATGACCAAAATGCCCTGGTG 58.731 50.000 0.00 0.00 46.12 4.17
572 585 0.187117 TGACCAAAATGCCCTGGTGA 59.813 50.000 0.00 0.00 46.12 4.02
573 586 0.890683 GACCAAAATGCCCTGGTGAG 59.109 55.000 0.00 0.00 46.12 3.51
574 587 0.542702 ACCAAAATGCCCTGGTGAGG 60.543 55.000 0.00 0.00 44.42 3.86
582 595 3.739922 CCTGGTGAGGGCATGGTA 58.260 61.111 0.00 0.00 35.40 3.25
583 596 2.234586 CCTGGTGAGGGCATGGTAT 58.765 57.895 0.00 0.00 35.40 2.73
584 597 0.552848 CCTGGTGAGGGCATGGTATT 59.447 55.000 0.00 0.00 35.40 1.89
585 598 1.063717 CCTGGTGAGGGCATGGTATTT 60.064 52.381 0.00 0.00 35.40 1.40
586 599 2.174639 CCTGGTGAGGGCATGGTATTTA 59.825 50.000 0.00 0.00 35.40 1.40
587 600 3.214328 CTGGTGAGGGCATGGTATTTAC 58.786 50.000 0.00 0.00 0.00 2.01
588 601 2.578480 TGGTGAGGGCATGGTATTTACA 59.422 45.455 0.00 0.00 0.00 2.41
589 602 3.204158 TGGTGAGGGCATGGTATTTACAT 59.796 43.478 0.00 0.00 0.00 2.29
590 603 4.215109 GGTGAGGGCATGGTATTTACATT 58.785 43.478 0.00 0.00 0.00 2.71
591 604 4.278419 GGTGAGGGCATGGTATTTACATTC 59.722 45.833 0.00 0.00 0.00 2.67
592 605 5.133221 GTGAGGGCATGGTATTTACATTCT 58.867 41.667 0.00 0.00 0.00 2.40
593 606 5.009010 GTGAGGGCATGGTATTTACATTCTG 59.991 44.000 0.00 0.00 0.00 3.02
594 607 5.129368 AGGGCATGGTATTTACATTCTGT 57.871 39.130 0.00 0.00 0.00 3.41
595 608 5.518865 AGGGCATGGTATTTACATTCTGTT 58.481 37.500 0.00 0.00 0.00 3.16
596 609 5.360714 AGGGCATGGTATTTACATTCTGTTG 59.639 40.000 0.00 0.00 0.00 3.33
597 610 5.043248 GGCATGGTATTTACATTCTGTTGC 58.957 41.667 0.00 0.00 0.00 4.17
598 611 5.043248 GCATGGTATTTACATTCTGTTGCC 58.957 41.667 0.00 0.00 0.00 4.52
599 612 5.394005 GCATGGTATTTACATTCTGTTGCCA 60.394 40.000 0.00 0.00 0.00 4.92
600 613 6.683610 GCATGGTATTTACATTCTGTTGCCAT 60.684 38.462 0.00 0.00 33.80 4.40
601 614 6.849085 TGGTATTTACATTCTGTTGCCATT 57.151 33.333 0.00 0.00 0.00 3.16
602 615 7.946381 TGGTATTTACATTCTGTTGCCATTA 57.054 32.000 0.00 0.00 0.00 1.90
603 616 7.767261 TGGTATTTACATTCTGTTGCCATTAC 58.233 34.615 0.00 0.00 0.00 1.89
604 617 7.613801 TGGTATTTACATTCTGTTGCCATTACT 59.386 33.333 0.00 0.00 0.00 2.24
605 618 9.116067 GGTATTTACATTCTGTTGCCATTACTA 57.884 33.333 0.00 0.00 0.00 1.82
609 622 8.800370 TTACATTCTGTTGCCATTACTATTCA 57.200 30.769 0.00 0.00 0.00 2.57
610 623 7.886629 ACATTCTGTTGCCATTACTATTCAT 57.113 32.000 0.00 0.00 0.00 2.57
611 624 8.297470 ACATTCTGTTGCCATTACTATTCATT 57.703 30.769 0.00 0.00 0.00 2.57
612 625 9.407380 ACATTCTGTTGCCATTACTATTCATTA 57.593 29.630 0.00 0.00 0.00 1.90
613 626 9.669353 CATTCTGTTGCCATTACTATTCATTAC 57.331 33.333 0.00 0.00 0.00 1.89
614 627 8.800370 TTCTGTTGCCATTACTATTCATTACA 57.200 30.769 0.00 0.00 0.00 2.41
615 628 8.437360 TCTGTTGCCATTACTATTCATTACAG 57.563 34.615 0.00 0.00 0.00 2.74
616 629 7.012327 TCTGTTGCCATTACTATTCATTACAGC 59.988 37.037 0.00 0.00 0.00 4.40
617 630 6.601217 TGTTGCCATTACTATTCATTACAGCA 59.399 34.615 0.00 0.00 0.00 4.41
618 631 6.866010 TGCCATTACTATTCATTACAGCAG 57.134 37.500 0.00 0.00 0.00 4.24
619 632 6.356556 TGCCATTACTATTCATTACAGCAGT 58.643 36.000 0.00 0.00 0.00 4.40
620 633 6.260714 TGCCATTACTATTCATTACAGCAGTG 59.739 38.462 0.00 0.00 0.00 3.66
621 634 6.260936 GCCATTACTATTCATTACAGCAGTGT 59.739 38.462 0.00 0.00 41.06 3.55
622 635 7.201732 GCCATTACTATTCATTACAGCAGTGTT 60.202 37.037 0.00 0.00 38.19 3.32
623 636 8.677300 CCATTACTATTCATTACAGCAGTGTTT 58.323 33.333 0.00 0.00 38.19 2.83
624 637 9.708222 CATTACTATTCATTACAGCAGTGTTTC 57.292 33.333 0.00 0.00 38.19 2.78
625 638 9.672673 ATTACTATTCATTACAGCAGTGTTTCT 57.327 29.630 0.00 0.00 38.19 2.52
626 639 7.986085 ACTATTCATTACAGCAGTGTTTCTT 57.014 32.000 0.00 0.00 38.19 2.52
627 640 8.396272 ACTATTCATTACAGCAGTGTTTCTTT 57.604 30.769 0.00 0.00 38.19 2.52
628 641 8.507249 ACTATTCATTACAGCAGTGTTTCTTTC 58.493 33.333 0.00 0.00 38.19 2.62
629 642 6.691754 TTCATTACAGCAGTGTTTCTTTCA 57.308 33.333 0.00 0.00 38.19 2.69
630 643 6.304356 TCATTACAGCAGTGTTTCTTTCAG 57.696 37.500 0.00 0.00 38.19 3.02
631 644 6.054941 TCATTACAGCAGTGTTTCTTTCAGA 58.945 36.000 0.00 0.00 38.19 3.27
632 645 6.712095 TCATTACAGCAGTGTTTCTTTCAGAT 59.288 34.615 0.00 0.00 38.19 2.90
633 646 6.545504 TTACAGCAGTGTTTCTTTCAGATC 57.454 37.500 0.00 0.00 38.19 2.75
634 647 3.817647 ACAGCAGTGTTTCTTTCAGATCC 59.182 43.478 0.00 0.00 30.30 3.36
635 648 3.070018 AGCAGTGTTTCTTTCAGATCCG 58.930 45.455 0.00 0.00 0.00 4.18
636 649 3.067106 GCAGTGTTTCTTTCAGATCCGA 58.933 45.455 0.00 0.00 0.00 4.55
637 650 3.120511 GCAGTGTTTCTTTCAGATCCGAC 60.121 47.826 0.00 0.00 0.00 4.79
638 651 3.121944 CAGTGTTTCTTTCAGATCCGACG 59.878 47.826 0.00 0.00 0.00 5.12
639 652 2.412089 GTGTTTCTTTCAGATCCGACGG 59.588 50.000 7.84 7.84 0.00 4.79
640 653 1.393883 GTTTCTTTCAGATCCGACGGC 59.606 52.381 9.66 0.00 0.00 5.68
641 654 0.108329 TTCTTTCAGATCCGACGGCC 60.108 55.000 9.66 3.31 0.00 6.13
642 655 1.521681 CTTTCAGATCCGACGGCCC 60.522 63.158 9.66 2.91 0.00 5.80
643 656 2.238847 CTTTCAGATCCGACGGCCCA 62.239 60.000 9.66 0.00 0.00 5.36
644 657 2.238847 TTTCAGATCCGACGGCCCAG 62.239 60.000 9.66 0.10 0.00 4.45
645 658 3.147595 CAGATCCGACGGCCCAGA 61.148 66.667 9.66 0.00 0.00 3.86
646 659 2.123251 AGATCCGACGGCCCAGAT 60.123 61.111 9.66 0.00 0.00 2.90
647 660 2.203771 AGATCCGACGGCCCAGATC 61.204 63.158 9.66 6.71 36.25 2.75
648 661 3.227792 GATCCGACGGCCCAGATCC 62.228 68.421 9.66 0.00 30.97 3.36
649 662 3.758133 ATCCGACGGCCCAGATCCT 62.758 63.158 9.66 0.00 0.00 3.24
650 663 3.917760 CCGACGGCCCAGATCCTC 61.918 72.222 0.00 0.00 0.00 3.71
651 664 3.917760 CGACGGCCCAGATCCTCC 61.918 72.222 0.00 0.00 0.00 4.30
652 665 3.551407 GACGGCCCAGATCCTCCC 61.551 72.222 0.00 0.00 0.00 4.30
653 666 4.414956 ACGGCCCAGATCCTCCCA 62.415 66.667 0.00 0.00 0.00 4.37
654 667 3.866582 CGGCCCAGATCCTCCCAC 61.867 72.222 0.00 0.00 0.00 4.61
655 668 3.493303 GGCCCAGATCCTCCCACC 61.493 72.222 0.00 0.00 0.00 4.61
656 669 2.367512 GCCCAGATCCTCCCACCT 60.368 66.667 0.00 0.00 0.00 4.00
657 670 2.447714 GCCCAGATCCTCCCACCTC 61.448 68.421 0.00 0.00 0.00 3.85
658 671 1.316266 CCCAGATCCTCCCACCTCT 59.684 63.158 0.00 0.00 0.00 3.69
659 672 0.762461 CCCAGATCCTCCCACCTCTC 60.762 65.000 0.00 0.00 0.00 3.20
660 673 1.112315 CCAGATCCTCCCACCTCTCG 61.112 65.000 0.00 0.00 0.00 4.04
661 674 0.106469 CAGATCCTCCCACCTCTCGA 60.106 60.000 0.00 0.00 0.00 4.04
662 675 0.856982 AGATCCTCCCACCTCTCGAT 59.143 55.000 0.00 0.00 0.00 3.59
663 676 1.203001 AGATCCTCCCACCTCTCGATC 60.203 57.143 0.00 0.00 0.00 3.69
664 677 0.178947 ATCCTCCCACCTCTCGATCC 60.179 60.000 0.00 0.00 0.00 3.36
665 678 1.075970 CCTCCCACCTCTCGATCCA 60.076 63.158 0.00 0.00 0.00 3.41
666 679 0.687757 CCTCCCACCTCTCGATCCAA 60.688 60.000 0.00 0.00 0.00 3.53
667 680 0.461961 CTCCCACCTCTCGATCCAAC 59.538 60.000 0.00 0.00 0.00 3.77
668 681 1.141881 CCCACCTCTCGATCCAACG 59.858 63.158 0.00 0.00 0.00 4.10
669 682 1.141881 CCACCTCTCGATCCAACGG 59.858 63.158 0.00 0.00 0.00 4.44
670 683 1.519455 CACCTCTCGATCCAACGGC 60.519 63.158 0.00 0.00 0.00 5.68
671 684 2.107141 CCTCTCGATCCAACGGCC 59.893 66.667 0.00 0.00 0.00 6.13
672 685 2.427245 CCTCTCGATCCAACGGCCT 61.427 63.158 0.00 0.00 0.00 5.19
673 686 1.107538 CCTCTCGATCCAACGGCCTA 61.108 60.000 0.00 0.00 0.00 3.93
674 687 0.744874 CTCTCGATCCAACGGCCTAA 59.255 55.000 0.00 0.00 0.00 2.69
675 688 1.136305 CTCTCGATCCAACGGCCTAAA 59.864 52.381 0.00 0.00 0.00 1.85
676 689 1.551430 TCTCGATCCAACGGCCTAAAA 59.449 47.619 0.00 0.00 0.00 1.52
677 690 1.664151 CTCGATCCAACGGCCTAAAAC 59.336 52.381 0.00 0.00 0.00 2.43
678 691 1.002201 TCGATCCAACGGCCTAAAACA 59.998 47.619 0.00 0.00 0.00 2.83
679 692 1.129811 CGATCCAACGGCCTAAAACAC 59.870 52.381 0.00 0.00 0.00 3.32
680 693 2.156098 GATCCAACGGCCTAAAACACA 58.844 47.619 0.00 0.00 0.00 3.72
681 694 2.279935 TCCAACGGCCTAAAACACAT 57.720 45.000 0.00 0.00 0.00 3.21
682 695 2.156098 TCCAACGGCCTAAAACACATC 58.844 47.619 0.00 0.00 0.00 3.06
683 696 1.883275 CCAACGGCCTAAAACACATCA 59.117 47.619 0.00 0.00 0.00 3.07
684 697 2.294791 CCAACGGCCTAAAACACATCAA 59.705 45.455 0.00 0.00 0.00 2.57
685 698 3.564511 CAACGGCCTAAAACACATCAAG 58.435 45.455 0.00 0.00 0.00 3.02
686 699 1.539827 ACGGCCTAAAACACATCAAGC 59.460 47.619 0.00 0.00 0.00 4.01
687 700 1.539388 CGGCCTAAAACACATCAAGCA 59.461 47.619 0.00 0.00 0.00 3.91
688 701 2.164219 CGGCCTAAAACACATCAAGCAT 59.836 45.455 0.00 0.00 0.00 3.79
689 702 3.376859 CGGCCTAAAACACATCAAGCATA 59.623 43.478 0.00 0.00 0.00 3.14
690 703 4.496341 CGGCCTAAAACACATCAAGCATAG 60.496 45.833 0.00 0.00 0.00 2.23
691 704 4.354587 GCCTAAAACACATCAAGCATAGC 58.645 43.478 0.00 0.00 0.00 2.97
692 705 4.591202 CCTAAAACACATCAAGCATAGCG 58.409 43.478 0.00 0.00 0.00 4.26
693 706 4.332543 CCTAAAACACATCAAGCATAGCGA 59.667 41.667 0.00 0.00 0.00 4.93
694 707 4.970662 AAAACACATCAAGCATAGCGAT 57.029 36.364 0.00 0.00 0.00 4.58
695 708 4.542662 AAACACATCAAGCATAGCGATC 57.457 40.909 0.00 0.00 0.00 3.69
696 709 2.487934 ACACATCAAGCATAGCGATCC 58.512 47.619 0.00 0.00 0.00 3.36
697 710 1.458445 CACATCAAGCATAGCGATCCG 59.542 52.381 0.00 0.00 0.00 4.18
698 711 1.341209 ACATCAAGCATAGCGATCCGA 59.659 47.619 0.00 0.00 0.00 4.55
699 712 1.723542 CATCAAGCATAGCGATCCGAC 59.276 52.381 0.00 0.00 0.00 4.79
700 713 0.317854 TCAAGCATAGCGATCCGACG 60.318 55.000 0.00 0.00 0.00 5.12
701 714 1.007271 AAGCATAGCGATCCGACGG 60.007 57.895 7.84 7.84 0.00 4.79
702 715 3.106407 GCATAGCGATCCGACGGC 61.106 66.667 9.66 0.00 0.00 5.68
703 716 2.430921 CATAGCGATCCGACGGCC 60.431 66.667 9.66 2.30 0.00 6.13
704 717 4.039357 ATAGCGATCCGACGGCCG 62.039 66.667 26.86 26.86 38.18 6.13
708 721 3.884350 CGATCCGACGGCCGAGAA 61.884 66.667 35.90 14.60 41.76 2.87
709 722 2.728817 GATCCGACGGCCGAGAAT 59.271 61.111 35.90 18.92 41.76 2.40
710 723 1.371881 GATCCGACGGCCGAGAATC 60.372 63.158 35.90 22.83 41.76 2.52
711 724 2.071844 GATCCGACGGCCGAGAATCA 62.072 60.000 35.90 10.58 41.76 2.57
712 725 2.351336 ATCCGACGGCCGAGAATCAC 62.351 60.000 35.90 12.10 41.76 3.06
713 726 2.490217 CGACGGCCGAGAATCACT 59.510 61.111 35.90 6.14 41.76 3.41
714 727 1.874019 CGACGGCCGAGAATCACTG 60.874 63.158 35.90 2.05 41.76 3.66
715 728 1.511305 GACGGCCGAGAATCACTGA 59.489 57.895 35.90 0.00 33.17 3.41
716 729 0.108804 GACGGCCGAGAATCACTGAA 60.109 55.000 35.90 0.00 33.17 3.02
717 730 0.389948 ACGGCCGAGAATCACTGAAC 60.390 55.000 35.90 0.00 33.17 3.18
718 731 0.108615 CGGCCGAGAATCACTGAACT 60.109 55.000 24.07 0.00 33.17 3.01
719 732 1.646189 GGCCGAGAATCACTGAACTC 58.354 55.000 0.00 6.56 33.17 3.01
720 733 1.205893 GGCCGAGAATCACTGAACTCT 59.794 52.381 11.97 4.97 33.17 3.24
721 734 2.266554 GCCGAGAATCACTGAACTCTG 58.733 52.381 11.97 8.36 33.17 3.35
722 735 2.353208 GCCGAGAATCACTGAACTCTGT 60.353 50.000 11.97 0.00 33.17 3.41
723 736 3.249091 CCGAGAATCACTGAACTCTGTG 58.751 50.000 9.72 9.72 44.10 3.66
728 741 2.533266 TCACTGAACTCTGTGAAGCC 57.467 50.000 14.77 0.00 46.80 4.35
729 742 2.042464 TCACTGAACTCTGTGAAGCCT 58.958 47.619 14.77 0.00 46.80 4.58
730 743 2.435805 TCACTGAACTCTGTGAAGCCTT 59.564 45.455 14.77 0.00 46.80 4.35
731 744 2.547211 CACTGAACTCTGTGAAGCCTTG 59.453 50.000 10.31 0.00 45.10 3.61
732 745 2.171448 ACTGAACTCTGTGAAGCCTTGT 59.829 45.455 0.00 0.00 0.00 3.16
733 746 3.388024 ACTGAACTCTGTGAAGCCTTGTA 59.612 43.478 0.00 0.00 0.00 2.41
734 747 3.993081 CTGAACTCTGTGAAGCCTTGTAG 59.007 47.826 0.00 0.00 0.00 2.74
735 748 3.244215 TGAACTCTGTGAAGCCTTGTAGG 60.244 47.826 0.00 0.00 38.80 3.18
736 749 2.609747 ACTCTGTGAAGCCTTGTAGGA 58.390 47.619 0.00 0.00 37.67 2.94
737 750 2.972713 ACTCTGTGAAGCCTTGTAGGAA 59.027 45.455 0.00 0.00 37.67 3.36
738 751 3.244249 ACTCTGTGAAGCCTTGTAGGAAC 60.244 47.826 0.00 0.00 37.67 3.62
739 752 2.703536 TCTGTGAAGCCTTGTAGGAACA 59.296 45.455 0.00 0.00 37.67 3.18
740 753 3.327757 TCTGTGAAGCCTTGTAGGAACAT 59.672 43.478 0.00 0.00 37.67 2.71
741 754 3.674997 TGTGAAGCCTTGTAGGAACATC 58.325 45.455 0.00 0.00 37.67 3.06
742 755 3.327757 TGTGAAGCCTTGTAGGAACATCT 59.672 43.478 0.00 0.00 37.67 2.90
743 756 4.202461 TGTGAAGCCTTGTAGGAACATCTT 60.202 41.667 0.00 0.00 37.67 2.40
744 757 4.762251 GTGAAGCCTTGTAGGAACATCTTT 59.238 41.667 0.00 0.00 37.67 2.52
745 758 5.003804 TGAAGCCTTGTAGGAACATCTTTC 58.996 41.667 0.00 0.00 37.67 2.62
746 759 4.917906 AGCCTTGTAGGAACATCTTTCT 57.082 40.909 0.00 0.00 37.67 2.52
747 760 4.837972 AGCCTTGTAGGAACATCTTTCTC 58.162 43.478 0.00 0.00 37.67 2.87
748 761 3.942115 GCCTTGTAGGAACATCTTTCTCC 59.058 47.826 0.00 0.00 37.67 3.71
749 762 4.323868 GCCTTGTAGGAACATCTTTCTCCT 60.324 45.833 0.00 0.00 42.37 3.69
750 763 5.104900 GCCTTGTAGGAACATCTTTCTCCTA 60.105 44.000 0.00 0.00 40.20 2.94
751 764 6.408662 GCCTTGTAGGAACATCTTTCTCCTAT 60.409 42.308 0.65 0.00 42.41 2.57
752 765 7.213678 CCTTGTAGGAACATCTTTCTCCTATC 58.786 42.308 0.65 0.00 42.41 2.08
753 766 7.070571 CCTTGTAGGAACATCTTTCTCCTATCT 59.929 40.741 0.65 0.00 42.41 1.98
754 767 7.979786 TGTAGGAACATCTTTCTCCTATCTT 57.020 36.000 0.65 0.00 42.41 2.40
755 768 8.380742 TGTAGGAACATCTTTCTCCTATCTTT 57.619 34.615 0.65 0.00 42.41 2.52
756 769 8.826765 TGTAGGAACATCTTTCTCCTATCTTTT 58.173 33.333 0.65 0.00 42.41 2.27
757 770 9.674068 GTAGGAACATCTTTCTCCTATCTTTTT 57.326 33.333 0.65 0.00 42.41 1.94
773 786 1.669184 TTTTTGATTTCGCGAGCACG 58.331 45.000 9.59 0.00 42.93 5.34
774 787 0.862490 TTTTGATTTCGCGAGCACGA 59.138 45.000 9.59 0.00 42.66 4.35
775 788 0.162933 TTTGATTTCGCGAGCACGAC 59.837 50.000 9.59 0.00 42.78 4.34
776 789 1.940404 TTGATTTCGCGAGCACGACG 61.940 55.000 9.59 10.70 42.78 5.12
777 790 2.126618 ATTTCGCGAGCACGACGA 60.127 55.556 9.59 15.86 42.78 4.20
778 791 2.056087 GATTTCGCGAGCACGACGAG 62.056 60.000 9.59 0.00 42.78 4.18
779 792 2.523184 ATTTCGCGAGCACGACGAGA 62.523 55.000 9.59 15.59 42.78 4.04
780 793 2.720561 TTTCGCGAGCACGACGAGAA 62.721 55.000 9.59 12.81 44.47 2.87
781 794 2.720561 TTCGCGAGCACGACGAGAAA 62.721 55.000 9.59 6.28 43.61 2.52
782 795 2.768920 CGCGAGCACGACGAGAAAG 61.769 63.158 8.01 0.00 42.66 2.62
783 796 2.437343 GCGAGCACGACGAGAAAGG 61.437 63.158 8.01 0.00 42.66 3.11
784 797 1.209383 CGAGCACGACGAGAAAGGA 59.791 57.895 0.00 0.00 42.66 3.36
785 798 0.386858 CGAGCACGACGAGAAAGGAA 60.387 55.000 0.00 0.00 42.66 3.36
786 799 1.732732 CGAGCACGACGAGAAAGGAAT 60.733 52.381 0.00 0.00 42.66 3.01
787 800 1.656095 GAGCACGACGAGAAAGGAATG 59.344 52.381 0.00 0.00 0.00 2.67
788 801 1.272490 AGCACGACGAGAAAGGAATGA 59.728 47.619 0.00 0.00 0.00 2.57
789 802 1.656095 GCACGACGAGAAAGGAATGAG 59.344 52.381 0.00 0.00 0.00 2.90
790 803 2.671351 GCACGACGAGAAAGGAATGAGA 60.671 50.000 0.00 0.00 0.00 3.27
791 804 3.175152 CACGACGAGAAAGGAATGAGAG 58.825 50.000 0.00 0.00 0.00 3.20
792 805 2.189342 CGACGAGAAAGGAATGAGAGC 58.811 52.381 0.00 0.00 0.00 4.09
793 806 2.189342 GACGAGAAAGGAATGAGAGCG 58.811 52.381 0.00 0.00 0.00 5.03
794 807 0.926846 CGAGAAAGGAATGAGAGCGC 59.073 55.000 0.00 0.00 0.00 5.92
795 808 1.470632 CGAGAAAGGAATGAGAGCGCT 60.471 52.381 11.27 11.27 0.00 5.92
796 809 1.932511 GAGAAAGGAATGAGAGCGCTG 59.067 52.381 18.48 0.00 0.00 5.18
797 810 1.277557 AGAAAGGAATGAGAGCGCTGT 59.722 47.619 18.48 12.55 0.00 4.40
798 811 2.079925 GAAAGGAATGAGAGCGCTGTT 58.920 47.619 18.48 1.45 0.00 3.16
799 812 1.446907 AAGGAATGAGAGCGCTGTTG 58.553 50.000 18.48 0.00 0.00 3.33
800 813 1.023513 AGGAATGAGAGCGCTGTTGC 61.024 55.000 18.48 9.74 0.00 4.17
819 832 4.785453 CCGGAGGCCTGCCAAGAC 62.785 72.222 19.82 0.00 46.14 3.01
833 849 2.414161 GCCAAGACGCACAAAATCTACC 60.414 50.000 0.00 0.00 0.00 3.18
906 924 3.735037 GAACGGCGAGTCATCCCCC 62.735 68.421 16.62 0.00 0.00 5.40
956 974 2.044551 GAGCAAAGGGGCAGAGGG 60.045 66.667 0.00 0.00 35.83 4.30
1902 1921 1.197430 AGACCTGGGAGGAGCAGTTG 61.197 60.000 0.00 0.00 37.67 3.16
2148 2167 2.104967 CCCTTCATGATTGCACATGGT 58.895 47.619 15.15 0.00 45.10 3.55
2292 2319 1.902918 GGCTGGTGTGGTTGATGCA 60.903 57.895 0.00 0.00 0.00 3.96
2367 2394 3.792736 GGTACGCCCTCCATGCCA 61.793 66.667 0.00 0.00 0.00 4.92
2628 2890 3.198635 CACATATGAAGAGGGACAGTGGT 59.801 47.826 10.38 0.00 0.00 4.16
2823 3085 3.417101 TCCAACGCTGTACATTTGGAAT 58.583 40.909 22.39 0.00 43.61 3.01
2844 3106 1.929836 GACATGAACGAGCCATCAGTC 59.070 52.381 0.00 0.00 0.00 3.51
2867 3129 0.696501 AACGGCCCTGAGGTATGTTT 59.303 50.000 0.00 0.00 34.57 2.83
2882 3144 8.407832 TGAGGTATGTTTCTGAATTGCAATATG 58.592 33.333 13.39 6.16 0.00 1.78
2883 3145 7.205297 AGGTATGTTTCTGAATTGCAATATGC 58.795 34.615 13.39 6.16 45.29 3.14
2886 3148 6.772360 TGTTTCTGAATTGCAATATGCCTA 57.228 33.333 13.39 0.00 44.23 3.93
2917 3179 1.689813 TGTGAAGGCGAGGTTTACAGA 59.310 47.619 0.00 0.00 0.00 3.41
2989 3255 5.519183 TGCCTAGGGATGCATTACATAAT 57.481 39.130 11.72 0.00 39.84 1.28
3037 3303 5.299279 GCACAATGCATATGGGTACTACTTT 59.701 40.000 0.00 0.00 44.26 2.66
3588 3856 2.626266 ACCATGACGTGACTTCACACTA 59.374 45.455 9.94 0.00 46.75 2.74
3819 4108 4.284234 CCTTTGTGGTTGGAATTTCCTGAT 59.716 41.667 16.25 0.00 37.46 2.90
3914 4207 4.959210 AGAGGTGAGTAGTGATACTGCATT 59.041 41.667 0.00 0.00 32.98 3.56
3952 4245 6.035650 CACTCATATTTTGCTGGAAAATGCAG 59.964 38.462 24.37 18.84 42.98 4.41
4048 4349 6.312141 TGGTATGACTTGAGAAATGGATCA 57.688 37.500 0.00 0.00 0.00 2.92
4406 4709 9.736023 CTTTTTCTTTACTAAAGACATGTTGCT 57.264 29.630 10.29 0.00 46.53 3.91
4449 4756 7.058525 TCCTTCCAGATTAGTCGATGTAGTTA 58.941 38.462 0.00 0.00 0.00 2.24
4862 5294 2.237143 TGATAGTCTGGGCAAGAAGGTG 59.763 50.000 0.00 0.00 36.40 4.00
4870 5302 4.019174 CTGGGCAAGAAGGTGTATTCAAT 58.981 43.478 0.00 0.00 0.00 2.57
5119 5551 0.396435 TCCATTGTTCGCTGTCAGGT 59.604 50.000 1.14 0.00 0.00 4.00
5130 5562 3.441222 TCGCTGTCAGGTTATAAACTCGA 59.559 43.478 0.00 3.64 0.00 4.04
5203 5635 6.986231 ACCCAAATTTCATTGTTTCAGACTTC 59.014 34.615 0.00 0.00 0.00 3.01
5226 5658 2.629617 AGTGGACCCAAAATTTCTGCAG 59.370 45.455 7.63 7.63 0.00 4.41
5229 5661 2.289010 GGACCCAAAATTTCTGCAGGTG 60.289 50.000 15.13 2.97 0.00 4.00
5422 5854 8.109634 TCTTGGATAGTTCTTTGCCTAAGATTT 58.890 33.333 0.00 0.00 42.32 2.17
5425 5857 9.920946 TGGATAGTTCTTTGCCTAAGATTTTAT 57.079 29.630 0.00 0.39 42.32 1.40
5434 5866 7.969690 TTGCCTAAGATTTTATTCCCATCAA 57.030 32.000 0.00 0.00 0.00 2.57
5474 5943 7.307692 GCCCAAACACAAAGGTAACAAATAATG 60.308 37.037 0.00 0.00 41.41 1.90
5569 6102 5.639506 CAGACCAAAGTGTAGTATCCAGTTG 59.360 44.000 0.00 0.00 0.00 3.16
5610 6143 7.306205 TGCGGCTAGTTATTATTAAAACGTT 57.694 32.000 0.00 0.00 0.00 3.99
5611 6144 7.750769 TGCGGCTAGTTATTATTAAAACGTTT 58.249 30.769 7.96 7.96 0.00 3.60
5612 6145 8.877779 TGCGGCTAGTTATTATTAAAACGTTTA 58.122 29.630 15.03 0.00 0.00 2.01
5645 6178 1.017387 CTGAAGTAGGAAATGGCGGC 58.983 55.000 0.00 0.00 0.00 6.53
5685 6218 1.134965 CAGCCTCTGTTCCGACCTAAG 60.135 57.143 0.00 0.00 0.00 2.18
5688 6221 2.448453 CCTCTGTTCCGACCTAAGAGT 58.552 52.381 0.00 0.00 33.94 3.24
5761 6509 7.831193 ACTGTATTACTCATTTTCAGCTTGGAT 59.169 33.333 0.00 0.00 0.00 3.41
5954 6706 6.949352 CAGAGCACTGGTCCAATTAAATAT 57.051 37.500 2.82 0.00 40.14 1.28
5955 6707 7.338800 CAGAGCACTGGTCCAATTAAATATT 57.661 36.000 2.82 0.00 40.14 1.28
5956 6708 8.450578 CAGAGCACTGGTCCAATTAAATATTA 57.549 34.615 2.82 0.00 40.14 0.98
5957 6709 8.902806 CAGAGCACTGGTCCAATTAAATATTAA 58.097 33.333 2.82 0.00 40.14 1.40
5958 6710 9.646522 AGAGCACTGGTCCAATTAAATATTAAT 57.353 29.630 4.57 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1 2 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2 3 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3 4 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
4 5 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5 6 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
6 7 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
7 8 4.892934 ACTCTCTCTCTCTCTCTCTCTCTC 59.107 50.000 0.00 0.00 0.00 3.20
8 9 4.648762 CACTCTCTCTCTCTCTCTCTCTCT 59.351 50.000 0.00 0.00 0.00 3.10
9 10 4.646945 TCACTCTCTCTCTCTCTCTCTCTC 59.353 50.000 0.00 0.00 0.00 3.20
10 11 4.614475 TCACTCTCTCTCTCTCTCTCTCT 58.386 47.826 0.00 0.00 0.00 3.10
11 12 4.202202 CCTCACTCTCTCTCTCTCTCTCTC 60.202 54.167 0.00 0.00 0.00 3.20
12 13 3.708631 CCTCACTCTCTCTCTCTCTCTCT 59.291 52.174 0.00 0.00 0.00 3.10
13 14 3.452627 ACCTCACTCTCTCTCTCTCTCTC 59.547 52.174 0.00 0.00 0.00 3.20
14 15 3.454858 ACCTCACTCTCTCTCTCTCTCT 58.545 50.000 0.00 0.00 0.00 3.10
15 16 3.914426 ACCTCACTCTCTCTCTCTCTC 57.086 52.381 0.00 0.00 0.00 3.20
16 17 3.711704 CCTACCTCACTCTCTCTCTCTCT 59.288 52.174 0.00 0.00 0.00 3.10
17 18 3.181454 CCCTACCTCACTCTCTCTCTCTC 60.181 56.522 0.00 0.00 0.00 3.20
18 19 2.777692 CCCTACCTCACTCTCTCTCTCT 59.222 54.545 0.00 0.00 0.00 3.10
19 20 2.775384 TCCCTACCTCACTCTCTCTCTC 59.225 54.545 0.00 0.00 0.00 3.20
20 21 2.777692 CTCCCTACCTCACTCTCTCTCT 59.222 54.545 0.00 0.00 0.00 3.10
21 22 2.158667 CCTCCCTACCTCACTCTCTCTC 60.159 59.091 0.00 0.00 0.00 3.20
22 23 1.850345 CCTCCCTACCTCACTCTCTCT 59.150 57.143 0.00 0.00 0.00 3.10
23 24 1.133606 CCCTCCCTACCTCACTCTCTC 60.134 61.905 0.00 0.00 0.00 3.20
24 25 0.930726 CCCTCCCTACCTCACTCTCT 59.069 60.000 0.00 0.00 0.00 3.10
25 26 0.927767 TCCCTCCCTACCTCACTCTC 59.072 60.000 0.00 0.00 0.00 3.20
26 27 1.394532 TTCCCTCCCTACCTCACTCT 58.605 55.000 0.00 0.00 0.00 3.24
27 28 2.112190 CTTTCCCTCCCTACCTCACTC 58.888 57.143 0.00 0.00 0.00 3.51
28 29 1.273896 CCTTTCCCTCCCTACCTCACT 60.274 57.143 0.00 0.00 0.00 3.41
29 30 1.205055 CCTTTCCCTCCCTACCTCAC 58.795 60.000 0.00 0.00 0.00 3.51
30 31 0.044244 CCCTTTCCCTCCCTACCTCA 59.956 60.000 0.00 0.00 0.00 3.86
31 32 0.342313 TCCCTTTCCCTCCCTACCTC 59.658 60.000 0.00 0.00 0.00 3.85
32 33 0.343726 CTCCCTTTCCCTCCCTACCT 59.656 60.000 0.00 0.00 0.00 3.08
33 34 0.342313 TCTCCCTTTCCCTCCCTACC 59.658 60.000 0.00 0.00 0.00 3.18
34 35 1.693083 CCTCTCCCTTTCCCTCCCTAC 60.693 61.905 0.00 0.00 0.00 3.18
35 36 0.642710 CCTCTCCCTTTCCCTCCCTA 59.357 60.000 0.00 0.00 0.00 3.53
36 37 1.162951 TCCTCTCCCTTTCCCTCCCT 61.163 60.000 0.00 0.00 0.00 4.20
37 38 0.253207 TTCCTCTCCCTTTCCCTCCC 60.253 60.000 0.00 0.00 0.00 4.30
38 39 0.913205 GTTCCTCTCCCTTTCCCTCC 59.087 60.000 0.00 0.00 0.00 4.30
39 40 0.913205 GGTTCCTCTCCCTTTCCCTC 59.087 60.000 0.00 0.00 0.00 4.30
40 41 0.498685 AGGTTCCTCTCCCTTTCCCT 59.501 55.000 0.00 0.00 0.00 4.20
41 42 0.621082 CAGGTTCCTCTCCCTTTCCC 59.379 60.000 0.00 0.00 0.00 3.97
42 43 0.034960 GCAGGTTCCTCTCCCTTTCC 60.035 60.000 0.00 0.00 0.00 3.13
43 44 0.391793 CGCAGGTTCCTCTCCCTTTC 60.392 60.000 0.00 0.00 0.00 2.62
44 45 1.679898 CGCAGGTTCCTCTCCCTTT 59.320 57.895 0.00 0.00 0.00 3.11
45 46 3.393360 CGCAGGTTCCTCTCCCTT 58.607 61.111 0.00 0.00 0.00 3.95
59 60 2.187685 CTCACTGCCTATGCCGCA 59.812 61.111 0.00 0.00 36.33 5.69
60 61 1.593750 CTCTCACTGCCTATGCCGC 60.594 63.158 0.00 0.00 36.33 6.53
61 62 1.068753 CCTCTCACTGCCTATGCCG 59.931 63.158 0.00 0.00 36.33 5.69
62 63 0.833287 TTCCTCTCACTGCCTATGCC 59.167 55.000 0.00 0.00 36.33 4.40
63 64 1.208052 TGTTCCTCTCACTGCCTATGC 59.792 52.381 0.00 0.00 38.26 3.14
64 65 2.736719 CGTGTTCCTCTCACTGCCTATG 60.737 54.545 0.00 0.00 34.14 2.23
65 66 1.478510 CGTGTTCCTCTCACTGCCTAT 59.521 52.381 0.00 0.00 34.14 2.57
66 67 0.888619 CGTGTTCCTCTCACTGCCTA 59.111 55.000 0.00 0.00 34.14 3.93
67 68 0.827925 TCGTGTTCCTCTCACTGCCT 60.828 55.000 0.00 0.00 34.14 4.75
68 69 0.033504 TTCGTGTTCCTCTCACTGCC 59.966 55.000 0.00 0.00 34.14 4.85
69 70 1.423395 CTTCGTGTTCCTCTCACTGC 58.577 55.000 0.00 0.00 34.14 4.40
70 71 1.613925 TCCTTCGTGTTCCTCTCACTG 59.386 52.381 0.00 0.00 34.14 3.66
71 72 1.889829 CTCCTTCGTGTTCCTCTCACT 59.110 52.381 0.00 0.00 34.14 3.41
72 73 1.887198 TCTCCTTCGTGTTCCTCTCAC 59.113 52.381 0.00 0.00 0.00 3.51
73 74 2.287977 TCTCCTTCGTGTTCCTCTCA 57.712 50.000 0.00 0.00 0.00 3.27
74 75 2.094442 CCTTCTCCTTCGTGTTCCTCTC 60.094 54.545 0.00 0.00 0.00 3.20
75 76 1.896465 CCTTCTCCTTCGTGTTCCTCT 59.104 52.381 0.00 0.00 0.00 3.69
76 77 1.066787 CCCTTCTCCTTCGTGTTCCTC 60.067 57.143 0.00 0.00 0.00 3.71
77 78 0.977395 CCCTTCTCCTTCGTGTTCCT 59.023 55.000 0.00 0.00 0.00 3.36
78 79 0.036294 CCCCTTCTCCTTCGTGTTCC 60.036 60.000 0.00 0.00 0.00 3.62
79 80 0.685660 ACCCCTTCTCCTTCGTGTTC 59.314 55.000 0.00 0.00 0.00 3.18
80 81 0.396811 CACCCCTTCTCCTTCGTGTT 59.603 55.000 0.00 0.00 0.00 3.32
81 82 2.058675 CACCCCTTCTCCTTCGTGT 58.941 57.895 0.00 0.00 0.00 4.49
82 83 1.376037 GCACCCCTTCTCCTTCGTG 60.376 63.158 0.00 0.00 0.00 4.35
83 84 1.831652 CTGCACCCCTTCTCCTTCGT 61.832 60.000 0.00 0.00 0.00 3.85
84 85 1.078848 CTGCACCCCTTCTCCTTCG 60.079 63.158 0.00 0.00 0.00 3.79
85 86 0.322008 CACTGCACCCCTTCTCCTTC 60.322 60.000 0.00 0.00 0.00 3.46
86 87 1.062488 ACACTGCACCCCTTCTCCTT 61.062 55.000 0.00 0.00 0.00 3.36
87 88 1.462238 ACACTGCACCCCTTCTCCT 60.462 57.895 0.00 0.00 0.00 3.69
88 89 1.302832 CACACTGCACCCCTTCTCC 60.303 63.158 0.00 0.00 0.00 3.71
89 90 1.302832 CCACACTGCACCCCTTCTC 60.303 63.158 0.00 0.00 0.00 2.87
90 91 2.839098 CCACACTGCACCCCTTCT 59.161 61.111 0.00 0.00 0.00 2.85
91 92 2.985847 GCCACACTGCACCCCTTC 60.986 66.667 0.00 0.00 0.00 3.46
92 93 4.954970 CGCCACACTGCACCCCTT 62.955 66.667 0.00 0.00 0.00 3.95
107 108 2.744709 TACTTCCTTTGCCGGCGC 60.745 61.111 23.90 0.00 0.00 6.53
108 109 2.396157 GGTACTTCCTTTGCCGGCG 61.396 63.158 23.90 7.44 0.00 6.46
109 110 2.396157 CGGTACTTCCTTTGCCGGC 61.396 63.158 22.73 22.73 38.86 6.13
110 111 3.884900 CGGTACTTCCTTTGCCGG 58.115 61.111 0.00 0.00 38.86 6.13
111 112 1.017701 GTCCGGTACTTCCTTTGCCG 61.018 60.000 0.00 0.00 41.82 5.69
112 113 1.017701 CGTCCGGTACTTCCTTTGCC 61.018 60.000 0.00 0.00 0.00 4.52
113 114 1.632948 GCGTCCGGTACTTCCTTTGC 61.633 60.000 0.00 0.00 0.00 3.68
114 115 0.320073 TGCGTCCGGTACTTCCTTTG 60.320 55.000 0.00 0.00 0.00 2.77
115 116 0.037605 CTGCGTCCGGTACTTCCTTT 60.038 55.000 0.00 0.00 0.00 3.11
116 117 1.590147 CTGCGTCCGGTACTTCCTT 59.410 57.895 0.00 0.00 0.00 3.36
117 118 3.003113 GCTGCGTCCGGTACTTCCT 62.003 63.158 0.00 0.00 0.00 3.36
118 119 2.508663 GCTGCGTCCGGTACTTCC 60.509 66.667 0.00 0.00 0.00 3.46
119 120 2.879462 CGCTGCGTCCGGTACTTC 60.879 66.667 14.93 0.00 0.00 3.01
143 144 4.176752 GAGGCTGGCCCCTAACGG 62.177 72.222 8.11 0.00 34.69 4.44
144 145 4.530857 CGAGGCTGGCCCCTAACG 62.531 72.222 8.11 0.00 34.69 3.18
145 146 3.081409 TCGAGGCTGGCCCCTAAC 61.081 66.667 8.11 0.00 34.69 2.34
146 147 3.081409 GTCGAGGCTGGCCCCTAA 61.081 66.667 8.11 0.00 34.69 2.69
183 184 2.048503 GTACCCTGTCAGCGCGTT 60.049 61.111 8.43 0.00 0.00 4.84
230 231 2.124445 TCGATTCCTCCGAGCCGA 60.124 61.111 0.00 0.00 0.00 5.54
282 283 1.615262 CCCCAATCCCCTCACCTTC 59.385 63.158 0.00 0.00 0.00 3.46
283 284 2.626467 GCCCCAATCCCCTCACCTT 61.626 63.158 0.00 0.00 0.00 3.50
314 326 4.489771 CGCGGCCCCATCCTCTTT 62.490 66.667 0.00 0.00 0.00 2.52
331 343 4.280019 GTCCACCACCACCCCACC 62.280 72.222 0.00 0.00 0.00 4.61
332 344 4.636435 CGTCCACCACCACCCCAC 62.636 72.222 0.00 0.00 0.00 4.61
333 345 4.882396 TCGTCCACCACCACCCCA 62.882 66.667 0.00 0.00 0.00 4.96
336 348 4.675029 CCGTCGTCCACCACCACC 62.675 72.222 0.00 0.00 0.00 4.61
388 400 4.821589 CTCCTTCACCGAGCCCGC 62.822 72.222 0.00 0.00 0.00 6.13
389 401 3.068691 TCTCCTTCACCGAGCCCG 61.069 66.667 0.00 0.00 0.00 6.13
390 402 2.579738 GTCTCCTTCACCGAGCCC 59.420 66.667 0.00 0.00 0.00 5.19
391 403 2.182030 CGTCTCCTTCACCGAGCC 59.818 66.667 0.00 0.00 0.00 4.70
392 404 2.182030 CCGTCTCCTTCACCGAGC 59.818 66.667 0.00 0.00 0.00 5.03
393 405 2.182030 GCCGTCTCCTTCACCGAG 59.818 66.667 0.00 0.00 0.00 4.63
394 406 3.744719 CGCCGTCTCCTTCACCGA 61.745 66.667 0.00 0.00 0.00 4.69
395 407 3.744719 TCGCCGTCTCCTTCACCG 61.745 66.667 0.00 0.00 0.00 4.94
396 408 2.126031 GTCGCCGTCTCCTTCACC 60.126 66.667 0.00 0.00 0.00 4.02
397 409 2.504244 CGTCGCCGTCTCCTTCAC 60.504 66.667 0.00 0.00 0.00 3.18
398 410 3.744719 CCGTCGCCGTCTCCTTCA 61.745 66.667 0.00 0.00 0.00 3.02
399 411 3.745803 ACCGTCGCCGTCTCCTTC 61.746 66.667 0.00 0.00 0.00 3.46
400 412 4.052229 CACCGTCGCCGTCTCCTT 62.052 66.667 0.00 0.00 0.00 3.36
413 425 3.958147 CTAGCAGCACCCCACACCG 62.958 68.421 0.00 0.00 0.00 4.94
414 426 2.045926 CTAGCAGCACCCCACACC 60.046 66.667 0.00 0.00 0.00 4.16
415 427 2.045926 CCTAGCAGCACCCCACAC 60.046 66.667 0.00 0.00 0.00 3.82
416 428 3.329889 CCCTAGCAGCACCCCACA 61.330 66.667 0.00 0.00 0.00 4.17
417 429 1.559065 TAACCCTAGCAGCACCCCAC 61.559 60.000 0.00 0.00 0.00 4.61
418 430 1.229690 TAACCCTAGCAGCACCCCA 60.230 57.895 0.00 0.00 0.00 4.96
419 431 1.527370 CTAACCCTAGCAGCACCCC 59.473 63.158 0.00 0.00 0.00 4.95
420 432 1.527370 CCTAACCCTAGCAGCACCC 59.473 63.158 0.00 0.00 0.00 4.61
421 433 1.272554 ACCCTAACCCTAGCAGCACC 61.273 60.000 0.00 0.00 0.00 5.01
422 434 0.107654 CACCCTAACCCTAGCAGCAC 60.108 60.000 0.00 0.00 0.00 4.40
423 435 1.271840 CCACCCTAACCCTAGCAGCA 61.272 60.000 0.00 0.00 0.00 4.41
424 436 0.981277 TCCACCCTAACCCTAGCAGC 60.981 60.000 0.00 0.00 0.00 5.25
425 437 1.123928 CTCCACCCTAACCCTAGCAG 58.876 60.000 0.00 0.00 0.00 4.24
426 438 0.326238 CCTCCACCCTAACCCTAGCA 60.326 60.000 0.00 0.00 0.00 3.49
427 439 0.031414 TCCTCCACCCTAACCCTAGC 60.031 60.000 0.00 0.00 0.00 3.42
428 440 1.413227 CCTCCTCCACCCTAACCCTAG 60.413 61.905 0.00 0.00 0.00 3.02
429 441 0.640495 CCTCCTCCACCCTAACCCTA 59.360 60.000 0.00 0.00 0.00 3.53
430 442 1.396594 CCTCCTCCACCCTAACCCT 59.603 63.158 0.00 0.00 0.00 4.34
431 443 2.376165 GCCTCCTCCACCCTAACCC 61.376 68.421 0.00 0.00 0.00 4.11
432 444 2.732619 CGCCTCCTCCACCCTAACC 61.733 68.421 0.00 0.00 0.00 2.85
433 445 0.685458 TACGCCTCCTCCACCCTAAC 60.685 60.000 0.00 0.00 0.00 2.34
434 446 0.396695 CTACGCCTCCTCCACCCTAA 60.397 60.000 0.00 0.00 0.00 2.69
435 447 1.229359 CTACGCCTCCTCCACCCTA 59.771 63.158 0.00 0.00 0.00 3.53
436 448 2.042843 CTACGCCTCCTCCACCCT 60.043 66.667 0.00 0.00 0.00 4.34
437 449 2.043248 TCTACGCCTCCTCCACCC 60.043 66.667 0.00 0.00 0.00 4.61
438 450 2.128507 CCTCTACGCCTCCTCCACC 61.129 68.421 0.00 0.00 0.00 4.61
439 451 1.076923 TCCTCTACGCCTCCTCCAC 60.077 63.158 0.00 0.00 0.00 4.02
440 452 1.227664 CTCCTCTACGCCTCCTCCA 59.772 63.158 0.00 0.00 0.00 3.86
441 453 1.529713 CCTCCTCTACGCCTCCTCC 60.530 68.421 0.00 0.00 0.00 4.30
442 454 0.536460 CTCCTCCTCTACGCCTCCTC 60.536 65.000 0.00 0.00 0.00 3.71
443 455 1.534697 CTCCTCCTCTACGCCTCCT 59.465 63.158 0.00 0.00 0.00 3.69
444 456 1.529713 CCTCCTCCTCTACGCCTCC 60.530 68.421 0.00 0.00 0.00 4.30
445 457 1.529713 CCCTCCTCCTCTACGCCTC 60.530 68.421 0.00 0.00 0.00 4.70
446 458 2.604152 CCCTCCTCCTCTACGCCT 59.396 66.667 0.00 0.00 0.00 5.52
447 459 2.522193 CCCCTCCTCCTCTACGCC 60.522 72.222 0.00 0.00 0.00 5.68
448 460 2.522193 CCCCCTCCTCCTCTACGC 60.522 72.222 0.00 0.00 0.00 4.42
449 461 1.151908 CTCCCCCTCCTCCTCTACG 59.848 68.421 0.00 0.00 0.00 3.51
450 462 1.544703 CCTCCCCCTCCTCCTCTAC 59.455 68.421 0.00 0.00 0.00 2.59
451 463 1.705450 CCCTCCCCCTCCTCCTCTA 60.705 68.421 0.00 0.00 0.00 2.43
452 464 3.039526 CCCTCCCCCTCCTCCTCT 61.040 72.222 0.00 0.00 0.00 3.69
455 467 4.862823 CGTCCCTCCCCCTCCTCC 62.863 77.778 0.00 0.00 0.00 4.30
457 469 3.756783 CTCGTCCCTCCCCCTCCT 61.757 72.222 0.00 0.00 0.00 3.69
498 511 1.668101 CCTGTGACGGAGACCTAGCC 61.668 65.000 0.00 0.00 0.00 3.93
499 512 0.680280 TCCTGTGACGGAGACCTAGC 60.680 60.000 0.00 0.00 0.00 3.42
500 513 3.571748 TCCTGTGACGGAGACCTAG 57.428 57.895 0.00 0.00 0.00 3.02
519 532 2.203238 TATAAAAGGGCCGGGCGC 60.203 61.111 26.94 26.94 41.91 6.53
520 533 1.895231 GGTATAAAAGGGCCGGGCG 60.895 63.158 23.19 0.00 0.00 6.13
521 534 0.536687 GAGGTATAAAAGGGCCGGGC 60.537 60.000 22.00 22.00 0.00 6.13
522 535 0.109913 GGAGGTATAAAAGGGCCGGG 59.890 60.000 2.18 0.00 0.00 5.73
523 536 0.841289 TGGAGGTATAAAAGGGCCGG 59.159 55.000 0.00 0.00 0.00 6.13
524 537 1.476291 GGTGGAGGTATAAAAGGGCCG 60.476 57.143 0.00 0.00 0.00 6.13
525 538 1.567175 TGGTGGAGGTATAAAAGGGCC 59.433 52.381 0.00 0.00 0.00 5.80
526 539 2.651455 GTGGTGGAGGTATAAAAGGGC 58.349 52.381 0.00 0.00 0.00 5.19
527 540 2.914059 CGTGGTGGAGGTATAAAAGGG 58.086 52.381 0.00 0.00 0.00 3.95
528 541 2.285977 GCGTGGTGGAGGTATAAAAGG 58.714 52.381 0.00 0.00 0.00 3.11
529 542 1.931172 CGCGTGGTGGAGGTATAAAAG 59.069 52.381 0.00 0.00 0.00 2.27
530 543 1.549620 TCGCGTGGTGGAGGTATAAAA 59.450 47.619 5.77 0.00 0.00 1.52
531 544 1.184431 TCGCGTGGTGGAGGTATAAA 58.816 50.000 5.77 0.00 0.00 1.40
532 545 1.184431 TTCGCGTGGTGGAGGTATAA 58.816 50.000 5.77 0.00 0.00 0.98
533 546 1.184431 TTTCGCGTGGTGGAGGTATA 58.816 50.000 5.77 0.00 0.00 1.47
534 547 0.539986 ATTTCGCGTGGTGGAGGTAT 59.460 50.000 5.77 0.00 0.00 2.73
535 548 0.390603 CATTTCGCGTGGTGGAGGTA 60.391 55.000 5.77 0.00 0.00 3.08
536 549 1.671054 CATTTCGCGTGGTGGAGGT 60.671 57.895 5.77 0.00 0.00 3.85
537 550 1.375396 TCATTTCGCGTGGTGGAGG 60.375 57.895 5.77 0.00 0.00 4.30
538 551 1.635663 GGTCATTTCGCGTGGTGGAG 61.636 60.000 5.77 0.00 0.00 3.86
539 552 1.669760 GGTCATTTCGCGTGGTGGA 60.670 57.895 5.77 0.00 0.00 4.02
540 553 1.511318 TTGGTCATTTCGCGTGGTGG 61.511 55.000 5.77 0.00 0.00 4.61
541 554 0.309302 TTTGGTCATTTCGCGTGGTG 59.691 50.000 5.77 3.39 0.00 4.17
542 555 1.025812 TTTTGGTCATTTCGCGTGGT 58.974 45.000 5.77 0.00 0.00 4.16
543 556 1.984990 CATTTTGGTCATTTCGCGTGG 59.015 47.619 5.77 0.00 0.00 4.94
544 557 1.386412 GCATTTTGGTCATTTCGCGTG 59.614 47.619 5.77 0.00 0.00 5.34
545 558 1.668628 GGCATTTTGGTCATTTCGCGT 60.669 47.619 5.77 0.00 0.00 6.01
546 559 0.991344 GGCATTTTGGTCATTTCGCG 59.009 50.000 0.00 0.00 0.00 5.87
547 560 1.066929 AGGGCATTTTGGTCATTTCGC 60.067 47.619 0.00 0.00 0.00 4.70
548 561 2.609350 CAGGGCATTTTGGTCATTTCG 58.391 47.619 0.00 0.00 0.00 3.46
549 562 2.302733 ACCAGGGCATTTTGGTCATTTC 59.697 45.455 0.00 0.00 44.16 2.17
550 563 2.038820 CACCAGGGCATTTTGGTCATTT 59.961 45.455 0.00 0.00 45.66 2.32
551 564 1.624813 CACCAGGGCATTTTGGTCATT 59.375 47.619 0.00 0.00 45.66 2.57
552 565 1.203162 TCACCAGGGCATTTTGGTCAT 60.203 47.619 0.00 0.00 45.66 3.06
553 566 0.187117 TCACCAGGGCATTTTGGTCA 59.813 50.000 0.00 0.00 45.66 4.02
554 567 0.890683 CTCACCAGGGCATTTTGGTC 59.109 55.000 0.00 0.00 45.66 4.02
556 569 2.279842 CCTCACCAGGGCATTTTGG 58.720 57.895 0.00 0.00 40.38 3.28
565 578 0.552848 AATACCATGCCCTCACCAGG 59.447 55.000 0.00 0.00 39.98 4.45
566 579 2.442236 AAATACCATGCCCTCACCAG 57.558 50.000 0.00 0.00 0.00 4.00
567 580 2.578480 TGTAAATACCATGCCCTCACCA 59.422 45.455 0.00 0.00 0.00 4.17
568 581 3.290948 TGTAAATACCATGCCCTCACC 57.709 47.619 0.00 0.00 0.00 4.02
569 582 5.009010 CAGAATGTAAATACCATGCCCTCAC 59.991 44.000 0.00 0.00 0.00 3.51
570 583 5.132502 CAGAATGTAAATACCATGCCCTCA 58.867 41.667 0.00 0.00 0.00 3.86
571 584 5.695851 CAGAATGTAAATACCATGCCCTC 57.304 43.478 0.00 0.00 0.00 4.30
593 606 7.026631 TGCTGTAATGAATAGTAATGGCAAC 57.973 36.000 0.00 0.00 0.00 4.17
594 607 6.828273 ACTGCTGTAATGAATAGTAATGGCAA 59.172 34.615 0.00 0.00 0.00 4.52
595 608 6.260714 CACTGCTGTAATGAATAGTAATGGCA 59.739 38.462 0.00 0.00 0.00 4.92
596 609 6.260936 ACACTGCTGTAATGAATAGTAATGGC 59.739 38.462 0.00 0.00 0.00 4.40
597 610 7.792374 ACACTGCTGTAATGAATAGTAATGG 57.208 36.000 0.00 0.00 0.00 3.16
598 611 9.708222 GAAACACTGCTGTAATGAATAGTAATG 57.292 33.333 0.00 0.00 0.00 1.90
599 612 9.672673 AGAAACACTGCTGTAATGAATAGTAAT 57.327 29.630 0.00 0.00 0.00 1.89
600 613 9.502091 AAGAAACACTGCTGTAATGAATAGTAA 57.498 29.630 0.00 0.00 0.00 2.24
601 614 9.502091 AAAGAAACACTGCTGTAATGAATAGTA 57.498 29.630 0.00 0.00 0.00 1.82
602 615 7.986085 AAGAAACACTGCTGTAATGAATAGT 57.014 32.000 0.00 0.00 0.00 2.12
603 616 8.506437 TGAAAGAAACACTGCTGTAATGAATAG 58.494 33.333 0.00 0.00 0.00 1.73
604 617 8.389779 TGAAAGAAACACTGCTGTAATGAATA 57.610 30.769 0.00 0.00 0.00 1.75
605 618 7.229306 TCTGAAAGAAACACTGCTGTAATGAAT 59.771 33.333 0.00 0.00 42.31 2.57
606 619 6.542005 TCTGAAAGAAACACTGCTGTAATGAA 59.458 34.615 0.00 0.00 42.31 2.57
607 620 6.054941 TCTGAAAGAAACACTGCTGTAATGA 58.945 36.000 0.00 0.00 42.31 2.57
608 621 6.304356 TCTGAAAGAAACACTGCTGTAATG 57.696 37.500 0.00 0.00 42.31 1.90
624 637 1.521681 GGGCCGTCGGATCTGAAAG 60.522 63.158 17.49 3.57 0.00 2.62
625 638 2.238847 CTGGGCCGTCGGATCTGAAA 62.239 60.000 17.49 0.00 0.00 2.69
626 639 2.682136 TGGGCCGTCGGATCTGAA 60.682 61.111 17.49 0.00 0.00 3.02
627 640 2.928988 ATCTGGGCCGTCGGATCTGA 62.929 60.000 17.49 14.75 0.00 3.27
628 641 2.427540 GATCTGGGCCGTCGGATCTG 62.428 65.000 17.49 9.87 42.99 2.90
629 642 2.123251 ATCTGGGCCGTCGGATCT 60.123 61.111 17.49 0.00 0.00 2.75
630 643 2.340443 GATCTGGGCCGTCGGATC 59.660 66.667 17.49 13.21 40.85 3.36
631 644 3.234730 GGATCTGGGCCGTCGGAT 61.235 66.667 17.49 3.18 35.61 4.18
632 645 4.458829 AGGATCTGGGCCGTCGGA 62.459 66.667 17.49 0.00 0.00 4.55
633 646 3.917760 GAGGATCTGGGCCGTCGG 61.918 72.222 6.99 6.99 0.00 4.79
634 647 3.917760 GGAGGATCTGGGCCGTCG 61.918 72.222 0.00 0.00 33.73 5.12
635 648 3.551407 GGGAGGATCTGGGCCGTC 61.551 72.222 0.00 0.00 33.73 4.79
636 649 4.414956 TGGGAGGATCTGGGCCGT 62.415 66.667 0.00 0.00 33.73 5.68
637 650 3.866582 GTGGGAGGATCTGGGCCG 61.867 72.222 0.00 0.00 33.73 6.13
638 651 3.493303 GGTGGGAGGATCTGGGCC 61.493 72.222 0.00 0.00 33.73 5.80
639 652 2.367512 AGGTGGGAGGATCTGGGC 60.368 66.667 0.00 0.00 33.73 5.36
640 653 0.762461 GAGAGGTGGGAGGATCTGGG 60.762 65.000 0.00 0.00 33.73 4.45
641 654 1.112315 CGAGAGGTGGGAGGATCTGG 61.112 65.000 0.00 0.00 33.73 3.86
642 655 0.106469 TCGAGAGGTGGGAGGATCTG 60.106 60.000 0.00 0.00 33.73 2.90
643 656 0.856982 ATCGAGAGGTGGGAGGATCT 59.143 55.000 0.00 0.00 33.73 2.75
644 657 1.253100 GATCGAGAGGTGGGAGGATC 58.747 60.000 0.00 0.00 0.00 3.36
645 658 0.178947 GGATCGAGAGGTGGGAGGAT 60.179 60.000 0.00 0.00 0.00 3.24
646 659 1.230497 GGATCGAGAGGTGGGAGGA 59.770 63.158 0.00 0.00 0.00 3.71
647 660 0.687757 TTGGATCGAGAGGTGGGAGG 60.688 60.000 0.00 0.00 0.00 4.30
648 661 0.461961 GTTGGATCGAGAGGTGGGAG 59.538 60.000 0.00 0.00 0.00 4.30
649 662 1.320344 CGTTGGATCGAGAGGTGGGA 61.320 60.000 0.00 0.00 0.00 4.37
650 663 1.141881 CGTTGGATCGAGAGGTGGG 59.858 63.158 0.00 0.00 0.00 4.61
651 664 1.141881 CCGTTGGATCGAGAGGTGG 59.858 63.158 0.00 0.00 0.00 4.61
652 665 1.519455 GCCGTTGGATCGAGAGGTG 60.519 63.158 0.00 0.00 0.00 4.00
653 666 2.722201 GGCCGTTGGATCGAGAGGT 61.722 63.158 0.00 0.00 0.00 3.85
654 667 1.107538 TAGGCCGTTGGATCGAGAGG 61.108 60.000 0.00 0.00 0.00 3.69
655 668 0.744874 TTAGGCCGTTGGATCGAGAG 59.255 55.000 0.00 0.00 0.00 3.20
656 669 1.187974 TTTAGGCCGTTGGATCGAGA 58.812 50.000 0.00 0.00 0.00 4.04
657 670 1.664151 GTTTTAGGCCGTTGGATCGAG 59.336 52.381 0.00 0.00 0.00 4.04
658 671 1.002201 TGTTTTAGGCCGTTGGATCGA 59.998 47.619 0.00 0.00 0.00 3.59
659 672 1.129811 GTGTTTTAGGCCGTTGGATCG 59.870 52.381 0.00 0.00 0.00 3.69
660 673 2.156098 TGTGTTTTAGGCCGTTGGATC 58.844 47.619 0.00 0.00 0.00 3.36
661 674 2.279935 TGTGTTTTAGGCCGTTGGAT 57.720 45.000 0.00 0.00 0.00 3.41
662 675 2.156098 GATGTGTTTTAGGCCGTTGGA 58.844 47.619 0.00 0.00 0.00 3.53
663 676 1.883275 TGATGTGTTTTAGGCCGTTGG 59.117 47.619 0.00 0.00 0.00 3.77
664 677 3.564511 CTTGATGTGTTTTAGGCCGTTG 58.435 45.455 0.00 0.00 0.00 4.10
665 678 2.030274 GCTTGATGTGTTTTAGGCCGTT 60.030 45.455 0.00 0.00 0.00 4.44
666 679 1.539827 GCTTGATGTGTTTTAGGCCGT 59.460 47.619 0.00 0.00 0.00 5.68
667 680 1.539388 TGCTTGATGTGTTTTAGGCCG 59.461 47.619 0.00 0.00 0.00 6.13
668 681 3.874392 ATGCTTGATGTGTTTTAGGCC 57.126 42.857 0.00 0.00 0.00 5.19
669 682 4.354587 GCTATGCTTGATGTGTTTTAGGC 58.645 43.478 0.00 0.00 0.00 3.93
670 683 4.332543 TCGCTATGCTTGATGTGTTTTAGG 59.667 41.667 0.00 0.00 0.00 2.69
671 684 5.469373 TCGCTATGCTTGATGTGTTTTAG 57.531 39.130 0.00 0.00 0.00 1.85
672 685 5.007626 GGATCGCTATGCTTGATGTGTTTTA 59.992 40.000 0.00 0.00 0.00 1.52
673 686 4.201950 GGATCGCTATGCTTGATGTGTTTT 60.202 41.667 0.00 0.00 0.00 2.43
674 687 3.313526 GGATCGCTATGCTTGATGTGTTT 59.686 43.478 0.00 0.00 0.00 2.83
675 688 2.874701 GGATCGCTATGCTTGATGTGTT 59.125 45.455 0.00 0.00 0.00 3.32
676 689 2.487934 GGATCGCTATGCTTGATGTGT 58.512 47.619 0.00 0.00 0.00 3.72
677 690 1.458445 CGGATCGCTATGCTTGATGTG 59.542 52.381 0.00 0.00 0.00 3.21
678 691 1.341209 TCGGATCGCTATGCTTGATGT 59.659 47.619 0.00 0.00 0.00 3.06
679 692 1.723542 GTCGGATCGCTATGCTTGATG 59.276 52.381 0.00 0.00 0.00 3.07
680 693 1.667177 CGTCGGATCGCTATGCTTGAT 60.667 52.381 0.00 0.00 0.00 2.57
681 694 0.317854 CGTCGGATCGCTATGCTTGA 60.318 55.000 0.00 0.00 0.00 3.02
682 695 1.278172 CCGTCGGATCGCTATGCTTG 61.278 60.000 4.91 0.00 0.00 4.01
683 696 1.007271 CCGTCGGATCGCTATGCTT 60.007 57.895 4.91 0.00 0.00 3.91
684 697 2.645567 CCGTCGGATCGCTATGCT 59.354 61.111 4.91 0.00 0.00 3.79
685 698 3.106407 GCCGTCGGATCGCTATGC 61.106 66.667 17.49 0.00 0.00 3.14
686 699 2.430921 GGCCGTCGGATCGCTATG 60.431 66.667 17.49 0.00 0.00 2.23
687 700 4.039357 CGGCCGTCGGATCGCTAT 62.039 66.667 19.50 0.00 34.75 2.97
691 704 3.195591 ATTCTCGGCCGTCGGATCG 62.196 63.158 27.15 17.56 39.77 3.69
692 705 1.371881 GATTCTCGGCCGTCGGATC 60.372 63.158 27.15 21.65 39.77 3.36
693 706 2.125326 TGATTCTCGGCCGTCGGAT 61.125 57.895 27.15 17.55 39.77 4.18
694 707 2.752640 TGATTCTCGGCCGTCGGA 60.753 61.111 27.15 18.49 39.77 4.55
695 708 2.582498 GTGATTCTCGGCCGTCGG 60.582 66.667 27.15 16.42 39.77 4.79
696 709 1.874019 CAGTGATTCTCGGCCGTCG 60.874 63.158 27.15 17.65 40.90 5.12
697 710 0.108804 TTCAGTGATTCTCGGCCGTC 60.109 55.000 27.15 16.09 0.00 4.79
698 711 0.389948 GTTCAGTGATTCTCGGCCGT 60.390 55.000 27.15 5.04 0.00 5.68
699 712 0.108615 AGTTCAGTGATTCTCGGCCG 60.109 55.000 22.12 22.12 0.00 6.13
700 713 1.205893 AGAGTTCAGTGATTCTCGGCC 59.794 52.381 15.44 0.00 32.90 6.13
701 714 2.266554 CAGAGTTCAGTGATTCTCGGC 58.733 52.381 15.44 0.00 32.90 5.54
702 715 3.057245 TCACAGAGTTCAGTGATTCTCGG 60.057 47.826 17.44 17.44 37.44 4.63
703 716 4.166187 TCACAGAGTTCAGTGATTCTCG 57.834 45.455 15.44 13.42 37.44 4.04
704 717 4.388469 GCTTCACAGAGTTCAGTGATTCTC 59.612 45.833 14.28 14.28 41.06 2.87
705 718 4.314121 GCTTCACAGAGTTCAGTGATTCT 58.686 43.478 7.98 0.00 41.06 2.40
706 719 3.434984 GGCTTCACAGAGTTCAGTGATTC 59.565 47.826 7.98 0.00 41.06 2.52
707 720 3.072184 AGGCTTCACAGAGTTCAGTGATT 59.928 43.478 7.98 0.00 41.06 2.57
708 721 2.636893 AGGCTTCACAGAGTTCAGTGAT 59.363 45.455 7.98 0.00 41.06 3.06
709 722 2.042464 AGGCTTCACAGAGTTCAGTGA 58.958 47.619 3.58 3.58 39.99 3.41
710 723 2.540265 AGGCTTCACAGAGTTCAGTG 57.460 50.000 0.00 0.00 35.08 3.66
711 724 2.171448 ACAAGGCTTCACAGAGTTCAGT 59.829 45.455 0.00 0.00 0.00 3.41
712 725 2.843701 ACAAGGCTTCACAGAGTTCAG 58.156 47.619 0.00 0.00 0.00 3.02
713 726 3.244215 CCTACAAGGCTTCACAGAGTTCA 60.244 47.826 0.00 0.00 0.00 3.18
714 727 3.006967 TCCTACAAGGCTTCACAGAGTTC 59.993 47.826 0.00 0.00 34.61 3.01
715 728 2.972713 TCCTACAAGGCTTCACAGAGTT 59.027 45.455 0.00 0.00 34.61 3.01
716 729 2.609747 TCCTACAAGGCTTCACAGAGT 58.390 47.619 0.00 0.00 34.61 3.24
717 730 3.244215 TGTTCCTACAAGGCTTCACAGAG 60.244 47.826 0.00 0.00 34.61 3.35
718 731 2.703536 TGTTCCTACAAGGCTTCACAGA 59.296 45.455 0.00 0.00 34.61 3.41
719 732 3.126001 TGTTCCTACAAGGCTTCACAG 57.874 47.619 0.00 0.00 34.61 3.66
720 733 3.327757 AGATGTTCCTACAAGGCTTCACA 59.672 43.478 0.00 0.00 37.91 3.58
721 734 3.944087 AGATGTTCCTACAAGGCTTCAC 58.056 45.455 0.00 0.00 37.91 3.18
722 735 4.640771 AAGATGTTCCTACAAGGCTTCA 57.359 40.909 0.00 0.00 37.91 3.02
723 736 5.249420 AGAAAGATGTTCCTACAAGGCTTC 58.751 41.667 0.00 0.00 37.91 3.86
724 737 5.248380 AGAAAGATGTTCCTACAAGGCTT 57.752 39.130 0.00 0.00 37.91 4.35
725 738 4.323868 GGAGAAAGATGTTCCTACAAGGCT 60.324 45.833 0.00 0.00 37.91 4.58
726 739 3.942115 GGAGAAAGATGTTCCTACAAGGC 59.058 47.826 0.00 0.00 37.91 4.35
727 740 5.428184 AGGAGAAAGATGTTCCTACAAGG 57.572 43.478 0.00 0.00 39.51 3.61
728 741 8.017418 AGATAGGAGAAAGATGTTCCTACAAG 57.983 38.462 1.84 0.00 44.12 3.16
729 742 7.979786 AGATAGGAGAAAGATGTTCCTACAA 57.020 36.000 1.84 0.00 44.12 2.41
730 743 7.979786 AAGATAGGAGAAAGATGTTCCTACA 57.020 36.000 1.84 0.00 44.12 2.74
731 744 9.674068 AAAAAGATAGGAGAAAGATGTTCCTAC 57.326 33.333 1.84 0.00 44.12 3.18
754 767 1.261885 TCGTGCTCGCGAAATCAAAAA 59.738 42.857 11.33 0.00 37.99 1.94
755 768 0.862490 TCGTGCTCGCGAAATCAAAA 59.138 45.000 11.33 0.00 37.99 2.44
756 769 0.162933 GTCGTGCTCGCGAAATCAAA 59.837 50.000 11.33 0.00 42.82 2.69
757 770 1.779061 GTCGTGCTCGCGAAATCAA 59.221 52.632 11.33 0.00 42.82 2.57
758 771 2.433334 CGTCGTGCTCGCGAAATCA 61.433 57.895 11.33 5.72 42.82 2.57
759 772 2.056087 CTCGTCGTGCTCGCGAAATC 62.056 60.000 21.22 2.75 42.82 2.17
760 773 2.126618 TCGTCGTGCTCGCGAAAT 60.127 55.556 19.61 0.00 42.82 2.17
761 774 2.720561 TTCTCGTCGTGCTCGCGAAA 62.721 55.000 21.22 16.56 42.82 3.46
762 775 2.720561 TTTCTCGTCGTGCTCGCGAA 62.721 55.000 21.22 11.32 42.82 4.70
763 776 3.244610 TTTCTCGTCGTGCTCGCGA 62.245 57.895 20.25 20.25 40.70 5.87
764 777 2.768920 CTTTCTCGTCGTGCTCGCG 61.769 63.158 15.34 15.34 37.70 5.87
765 778 2.437343 CCTTTCTCGTCGTGCTCGC 61.437 63.158 2.69 0.00 36.96 5.03
766 779 0.386858 TTCCTTTCTCGTCGTGCTCG 60.387 55.000 0.81 0.81 38.55 5.03
767 780 1.656095 CATTCCTTTCTCGTCGTGCTC 59.344 52.381 0.00 0.00 0.00 4.26
768 781 1.272490 TCATTCCTTTCTCGTCGTGCT 59.728 47.619 0.00 0.00 0.00 4.40
769 782 1.656095 CTCATTCCTTTCTCGTCGTGC 59.344 52.381 0.00 0.00 0.00 5.34
770 783 3.175152 CTCTCATTCCTTTCTCGTCGTG 58.825 50.000 0.00 0.00 0.00 4.35
771 784 2.416162 GCTCTCATTCCTTTCTCGTCGT 60.416 50.000 0.00 0.00 0.00 4.34
772 785 2.189342 GCTCTCATTCCTTTCTCGTCG 58.811 52.381 0.00 0.00 0.00 5.12
773 786 2.189342 CGCTCTCATTCCTTTCTCGTC 58.811 52.381 0.00 0.00 0.00 4.20
774 787 1.737363 GCGCTCTCATTCCTTTCTCGT 60.737 52.381 0.00 0.00 0.00 4.18
775 788 0.926846 GCGCTCTCATTCCTTTCTCG 59.073 55.000 0.00 0.00 0.00 4.04
776 789 1.932511 CAGCGCTCTCATTCCTTTCTC 59.067 52.381 7.13 0.00 0.00 2.87
777 790 1.277557 ACAGCGCTCTCATTCCTTTCT 59.722 47.619 7.13 0.00 0.00 2.52
778 791 1.731720 ACAGCGCTCTCATTCCTTTC 58.268 50.000 7.13 0.00 0.00 2.62
779 792 1.808945 CAACAGCGCTCTCATTCCTTT 59.191 47.619 7.13 0.00 0.00 3.11
780 793 1.446907 CAACAGCGCTCTCATTCCTT 58.553 50.000 7.13 0.00 0.00 3.36
781 794 1.023513 GCAACAGCGCTCTCATTCCT 61.024 55.000 7.13 0.00 0.00 3.36
782 795 1.023513 AGCAACAGCGCTCTCATTCC 61.024 55.000 7.13 0.00 37.91 3.01
783 796 2.464682 AGCAACAGCGCTCTCATTC 58.535 52.632 7.13 0.00 37.91 2.67
784 797 4.709840 AGCAACAGCGCTCTCATT 57.290 50.000 7.13 0.00 37.91 2.57
794 807 3.710722 AGGCCTCCGGAGCAACAG 61.711 66.667 26.87 13.07 0.00 3.16
795 808 4.020617 CAGGCCTCCGGAGCAACA 62.021 66.667 26.87 0.00 0.00 3.33
800 813 4.479993 CTTGGCAGGCCTCCGGAG 62.480 72.222 25.36 25.36 36.94 4.63
802 815 4.785453 GTCTTGGCAGGCCTCCGG 62.785 72.222 0.00 0.00 36.94 5.14
805 818 4.704833 TGCGTCTTGGCAGGCCTC 62.705 66.667 0.00 0.00 38.17 4.70
819 832 1.136085 CCGTGTGGTAGATTTTGTGCG 60.136 52.381 0.00 0.00 0.00 5.34
833 849 2.046314 CCTTGTAGGGGCCGTGTG 60.046 66.667 9.43 0.00 0.00 3.82
906 924 3.145473 TTTGCAGGACTGGGGGTGG 62.145 63.158 1.01 0.00 0.00 4.61
908 926 1.774217 TCTTTGCAGGACTGGGGGT 60.774 57.895 1.01 0.00 0.00 4.95
956 974 3.867771 CTGTGGAGCAGCGAACTC 58.132 61.111 0.00 0.00 38.52 3.01
1039 1058 2.284151 GAGGAGGAGGAGGGGGAC 59.716 72.222 0.00 0.00 0.00 4.46
1902 1921 2.048127 GTGTCGGTGTGGCTCCTC 60.048 66.667 0.00 0.00 0.00 3.71
2292 2319 3.253432 GCTCGGAACCAACAAAGAAGAAT 59.747 43.478 0.00 0.00 0.00 2.40
2628 2890 2.846206 AGCTTCCTCATGGATGTGGTAA 59.154 45.455 7.44 1.87 42.81 2.85
2823 3085 1.276138 ACTGATGGCTCGTTCATGTCA 59.724 47.619 0.00 0.00 0.00 3.58
2844 3106 0.541863 ATACCTCAGGGCCGTTGAAG 59.458 55.000 9.55 6.51 35.63 3.02
2882 3144 4.320788 GCCTTCACAAGATAATGCATAGGC 60.321 45.833 12.63 12.63 41.68 3.93
2883 3145 4.083643 CGCCTTCACAAGATAATGCATAGG 60.084 45.833 0.00 0.00 0.00 2.57
2886 3148 3.544684 TCGCCTTCACAAGATAATGCAT 58.455 40.909 0.00 0.00 0.00 3.96
2951 3213 3.287867 AGGCATGGTGACCTATTGAAG 57.712 47.619 2.11 0.00 33.38 3.02
2953 3215 2.705658 CCTAGGCATGGTGACCTATTGA 59.294 50.000 2.11 0.00 37.88 2.57
2954 3216 2.224621 CCCTAGGCATGGTGACCTATTG 60.225 54.545 2.05 0.00 37.88 1.90
2955 3217 2.057922 CCCTAGGCATGGTGACCTATT 58.942 52.381 2.05 0.00 37.88 1.73
2956 3218 1.223077 TCCCTAGGCATGGTGACCTAT 59.777 52.381 2.05 0.00 37.88 2.57
3037 3303 3.054875 GCCCATCTGATGTAGCCATATGA 60.055 47.826 15.95 0.00 0.00 2.15
3247 3513 8.988060 TCAGGATTATGAGGTGAAGTTGTAATA 58.012 33.333 0.00 0.00 0.00 0.98
3552 3820 7.608376 TCACGTCATGGTAATAAATTTTCCTCA 59.392 33.333 0.00 0.00 0.00 3.86
3819 4108 9.913310 TCACCATTATTATATGTTTCCTTGTCA 57.087 29.630 0.00 0.00 0.00 3.58
4048 4349 2.708861 TGACACACTTCCCTTGTATGGT 59.291 45.455 0.00 0.00 0.00 3.55
4406 4709 3.173965 AGGAGCTAGCTAAGGTTCACAA 58.826 45.455 19.38 0.00 35.60 3.33
4449 4756 9.610705 GCAATATGATGTATAGTTGATCCTCAT 57.389 33.333 0.00 0.00 0.00 2.90
4576 4883 8.083462 TGGTCATATATTTAGCTAGTTTTGCG 57.917 34.615 0.00 0.00 35.28 4.85
4826 5258 5.410746 CAGACTATCAGGCGCAATATTGATT 59.589 40.000 19.73 0.00 32.83 2.57
4862 5294 9.121517 CTTTCAATCACACACTCAATTGAATAC 57.878 33.333 9.88 0.00 43.68 1.89
5103 5535 5.938125 AGTTTATAACCTGACAGCGAACAAT 59.062 36.000 0.00 0.00 0.00 2.71
5119 5551 6.201044 GCTTCTAGCATTGCTCGAGTTTATAA 59.799 38.462 15.81 2.78 41.89 0.98
5130 5562 2.969628 ACTACGCTTCTAGCATTGCT 57.030 45.000 16.63 16.63 42.58 3.91
5203 5635 2.289010 GCAGAAATTTTGGGTCCACTGG 60.289 50.000 0.00 0.00 0.00 4.00
5422 5854 5.514169 TGTTGCCTATGTTGATGGGAATAA 58.486 37.500 0.00 0.00 33.96 1.40
5425 5857 3.448093 TGTTGCCTATGTTGATGGGAA 57.552 42.857 0.00 0.00 31.67 3.97
5604 6137 6.205853 TCAGCCAGTGAATGTAATAAACGTTT 59.794 34.615 18.90 18.90 37.44 3.60
5610 6143 7.047891 CCTACTTCAGCCAGTGAATGTAATAA 58.952 38.462 0.00 0.00 44.44 1.40
5611 6144 6.382859 TCCTACTTCAGCCAGTGAATGTAATA 59.617 38.462 0.00 0.00 44.44 0.98
5612 6145 5.189736 TCCTACTTCAGCCAGTGAATGTAAT 59.810 40.000 0.00 0.00 44.44 1.89
5645 6178 1.143183 GGGCTGAATGCATTGCCTG 59.857 57.895 29.57 16.82 44.36 4.85
5685 6218 4.154918 CCACTTTCAAGGCATTCTACACTC 59.845 45.833 0.00 0.00 0.00 3.51
5787 6537 7.743104 TCGAGCTGAGAAATAAAATTGTCTTC 58.257 34.615 0.00 0.00 0.00 2.87
5844 6594 5.188163 TCCTTGTATTGAATGTACCCGAGAA 59.812 40.000 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.