Multiple sequence alignment - TraesCS4A01G065700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G065700 chr4A 100.000 4609 0 0 1 4609 63009989 63014597 0.000000e+00 8512
1 TraesCS4A01G065700 chr4A 93.889 180 7 2 3887 4065 655164242 655164418 7.600000e-68 268
2 TraesCS4A01G065700 chr4A 83.630 281 44 2 2918 3197 570478647 570478368 3.540000e-66 263
3 TraesCS4A01G065700 chr4A 90.909 77 6 1 2201 2276 466572281 466572205 8.160000e-18 102
4 TraesCS4A01G065700 chr4B 90.360 1193 62 22 1 1169 503560112 503561275 0.000000e+00 1517
5 TraesCS4A01G065700 chr4B 93.921 987 41 17 2641 3614 503564839 503565819 0.000000e+00 1472
6 TraesCS4A01G065700 chr4B 95.751 353 14 1 1418 1769 503561639 503561991 6.690000e-158 568
7 TraesCS4A01G065700 chr4B 84.838 554 54 17 4061 4609 503567085 503567613 8.780000e-147 531
8 TraesCS4A01G065700 chr4B 92.643 367 19 4 2282 2647 503564336 503564695 5.280000e-144 521
9 TraesCS4A01G065700 chr4B 81.105 344 63 2 2855 3197 46609002 46609344 1.630000e-69 274
10 TraesCS4A01G065700 chr4B 84.959 246 28 6 1170 1410 503561311 503561552 1.660000e-59 241
11 TraesCS4A01G065700 chr4B 92.899 169 3 5 2033 2199 503564178 503564339 2.140000e-58 237
12 TraesCS4A01G065700 chr4B 91.525 177 8 3 3887 4063 663880351 663880182 2.140000e-58 237
13 TraesCS4A01G065700 chr4B 89.809 157 15 1 3717 3873 503566124 503566279 2.810000e-47 200
14 TraesCS4A01G065700 chr4D 94.564 975 29 17 2660 3611 405323429 405324402 0.000000e+00 1485
15 TraesCS4A01G065700 chr4D 86.658 787 50 21 1417 2199 405322191 405322926 0.000000e+00 821
16 TraesCS4A01G065700 chr4D 90.803 598 30 11 1 587 405306951 405307534 0.000000e+00 776
17 TraesCS4A01G065700 chr4D 91.616 489 18 11 671 1145 405321320 405321799 0.000000e+00 654
18 TraesCS4A01G065700 chr4D 96.438 365 13 0 2282 2646 405322923 405323287 1.830000e-168 603
19 TraesCS4A01G065700 chr4D 90.680 397 17 5 4225 4609 405325309 405325697 1.140000e-140 510
20 TraesCS4A01G065700 chr4D 88.066 243 23 3 1170 1410 405321867 405322105 2.710000e-72 283
21 TraesCS4A01G065700 chr4D 81.105 344 63 2 2855 3197 32221296 32221638 1.630000e-69 274
22 TraesCS4A01G065700 chr4D 97.531 81 2 0 3809 3889 405325038 405325118 6.220000e-29 139
23 TraesCS4A01G065700 chr4D 86.022 93 13 0 1001 1093 32219518 32219610 2.930000e-17 100
24 TraesCS4A01G065700 chr2A 83.801 321 49 1 3294 3611 146788573 146788893 7.490000e-78 302
25 TraesCS4A01G065700 chr2A 88.136 118 14 0 998 1115 146786075 146786192 1.730000e-29 141
26 TraesCS4A01G065700 chr5D 84.091 308 46 2 3296 3603 479879083 479879387 1.250000e-75 294
27 TraesCS4A01G065700 chr5D 82.099 162 29 0 2683 2844 479878469 479878630 6.220000e-29 139
28 TraesCS4A01G065700 chr2D 83.178 321 51 1 3294 3611 154181725 154181405 1.620000e-74 291
29 TraesCS4A01G065700 chr2D 88.136 118 14 0 998 1115 154184124 154184007 1.730000e-29 141
30 TraesCS4A01G065700 chr5A 83.766 308 47 2 3296 3603 598519700 598520004 5.830000e-74 289
31 TraesCS4A01G065700 chr5A 94.886 176 6 1 3887 4062 672756132 672756304 5.880000e-69 272
32 TraesCS4A01G065700 chr5A 82.099 162 29 0 2683 2844 598519054 598519215 6.220000e-29 139
33 TraesCS4A01G065700 chr2B 84.000 300 48 0 3294 3593 211624377 211624078 5.830000e-74 289
34 TraesCS4A01G065700 chr2B 88.136 118 14 0 998 1115 211626994 211626877 1.730000e-29 141
35 TraesCS4A01G065700 chr7B 94.857 175 6 1 3887 4061 656511925 656511754 2.110000e-68 270
36 TraesCS4A01G065700 chr7B 92.737 179 9 2 3888 4065 548479925 548480100 5.920000e-64 255
37 TraesCS4A01G065700 chr7B 92.697 178 9 2 3889 4065 246380191 246380365 2.130000e-63 254
38 TraesCS4A01G065700 chr1B 93.750 176 7 2 3887 4061 413206825 413206653 1.270000e-65 261
39 TraesCS4A01G065700 chr1B 83.333 282 45 2 2917 3197 594139888 594140168 4.570000e-65 259
40 TraesCS4A01G065700 chr1B 92.090 177 9 2 3887 4061 619696718 619696545 1.280000e-60 244
41 TraesCS4A01G065700 chr1B 86.022 93 13 0 1001 1093 594138226 594138318 2.930000e-17 100
42 TraesCS4A01G065700 chr3A 93.258 178 6 3 3887 4062 745271394 745271221 1.650000e-64 257
43 TraesCS4A01G065700 chr1D 82.206 281 48 2 2918 3197 438370224 438370503 1.660000e-59 241
44 TraesCS4A01G065700 chr1D 86.022 93 13 0 1001 1093 438368548 438368640 2.930000e-17 100
45 TraesCS4A01G065700 chr1A 81.915 282 47 4 2918 3197 535063883 535064162 7.710000e-58 235
46 TraesCS4A01G065700 chr1A 86.022 93 13 0 1001 1093 535062223 535062315 2.930000e-17 100
47 TraesCS4A01G065700 chr5B 82.099 162 29 0 2683 2844 587601053 587601214 6.220000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G065700 chr4A 63009989 63014597 4608 False 8512.000000 8512 100.000000 1 4609 1 chr4A.!!$F1 4608
1 TraesCS4A01G065700 chr4B 503560112 503567613 7501 False 660.875000 1517 90.647500 1 4609 8 chr4B.!!$F2 4608
2 TraesCS4A01G065700 chr4D 405306951 405307534 583 False 776.000000 776 90.803000 1 587 1 chr4D.!!$F1 586
3 TraesCS4A01G065700 chr4D 405321320 405325697 4377 False 642.142857 1485 92.221857 671 4609 7 chr4D.!!$F3 3938
4 TraesCS4A01G065700 chr2A 146786075 146788893 2818 False 221.500000 302 85.968500 998 3611 2 chr2A.!!$F1 2613
5 TraesCS4A01G065700 chr5D 479878469 479879387 918 False 216.500000 294 83.095000 2683 3603 2 chr5D.!!$F1 920
6 TraesCS4A01G065700 chr2D 154181405 154184124 2719 True 216.000000 291 85.657000 998 3611 2 chr2D.!!$R1 2613
7 TraesCS4A01G065700 chr5A 598519054 598520004 950 False 214.000000 289 82.932500 2683 3603 2 chr5A.!!$F2 920
8 TraesCS4A01G065700 chr2B 211624078 211626994 2916 True 215.000000 289 86.068000 998 3593 2 chr2B.!!$R1 2595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
502 513 0.108424 CTAGTGCACAGCAGAGTCCC 60.108 60.0 21.04 0.0 40.08 4.46 F
933 961 0.319900 CCTCGCGCAGGTGCTATTAT 60.320 55.0 8.75 0.0 37.53 1.28 F
981 1009 0.320596 ACAAGAGCAGAGCAGAGCAC 60.321 55.0 0.00 0.0 0.00 4.40 F
2257 5070 0.039798 ATTGAGCTGTTTGCACGCTG 60.040 50.0 0.00 0.0 45.94 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2238 5051 0.039798 CAGCGTGCAAACAGCTCAAT 60.040 50.0 4.55 0.0 45.94 2.57 R
2244 5057 0.657312 TTCAGACAGCGTGCAAACAG 59.343 50.0 0.00 0.0 0.00 3.16 R
2466 5280 0.671781 CAAGTCCTGAGCCAGTTCCG 60.672 60.0 2.18 0.0 0.00 4.30 R
4178 8882 0.095589 CACGTCGTCTCTCCTCTTCG 59.904 60.0 0.00 0.0 0.00 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
117 118 1.943116 CTCTCGCAGTAGCCAGCAGT 61.943 60.000 0.00 0.00 37.52 4.40
120 121 1.874019 CGCAGTAGCCAGCAGTACG 60.874 63.158 0.00 0.00 37.52 3.67
145 146 3.473163 AAGCCTGGCCCCTGCTTTT 62.473 57.895 16.57 0.00 42.37 2.27
270 276 2.609459 GTGGATCGACATGGTGATGAAC 59.391 50.000 2.59 2.27 33.36 3.18
272 278 3.118298 TGGATCGACATGGTGATGAACAT 60.118 43.478 6.67 0.00 33.36 2.71
308 314 7.389053 ACCAAACAAGAAACTGCAAAATAAACA 59.611 29.630 0.00 0.00 0.00 2.83
336 342 0.532573 TTGCTAGCTTCCACCTCTCG 59.467 55.000 17.23 0.00 0.00 4.04
353 359 0.591659 TCGACAGTCTCGTGGTTCTG 59.408 55.000 0.00 0.00 43.45 3.02
370 376 2.742348 TCTGGCGGTAGGATCAAAGTA 58.258 47.619 0.00 0.00 0.00 2.24
371 377 3.305720 TCTGGCGGTAGGATCAAAGTAT 58.694 45.455 0.00 0.00 0.00 2.12
372 378 3.321111 TCTGGCGGTAGGATCAAAGTATC 59.679 47.826 0.00 0.00 0.00 2.24
373 379 2.035449 TGGCGGTAGGATCAAAGTATCG 59.965 50.000 0.00 0.00 0.00 2.92
374 380 2.295349 GGCGGTAGGATCAAAGTATCGA 59.705 50.000 0.00 0.00 0.00 3.59
375 381 3.243636 GGCGGTAGGATCAAAGTATCGAA 60.244 47.826 0.00 0.00 0.00 3.71
376 382 3.982058 GCGGTAGGATCAAAGTATCGAAG 59.018 47.826 0.00 0.00 0.00 3.79
377 383 4.499357 GCGGTAGGATCAAAGTATCGAAGT 60.499 45.833 0.00 0.00 0.00 3.01
443 454 8.341173 CAATTCATTGCATCTAGGAGTACTTTC 58.659 37.037 0.00 0.00 0.00 2.62
458 469 8.478877 AGGAGTACTTTCCAATAACATGAGTAG 58.521 37.037 0.00 0.00 39.84 2.57
459 470 8.475639 GGAGTACTTTCCAATAACATGAGTAGA 58.524 37.037 0.00 0.00 37.20 2.59
502 513 0.108424 CTAGTGCACAGCAGAGTCCC 60.108 60.000 21.04 0.00 40.08 4.46
580 592 0.465097 CAAGATAGCCAGCACCCCTG 60.465 60.000 0.00 0.00 41.41 4.45
594 606 1.026718 CCCCTGCCGTTGAACTCATC 61.027 60.000 0.00 0.00 0.00 2.92
595 607 0.321564 CCCTGCCGTTGAACTCATCA 60.322 55.000 0.00 0.00 35.85 3.07
649 661 2.150837 GTCTTACGACGGCAGCGAC 61.151 63.158 0.00 0.00 0.00 5.19
754 774 3.000727 CAGTGATTTTGTCCCTACGACC 58.999 50.000 0.00 0.00 41.18 4.79
761 781 4.371417 TCCCTACGACCGGTGGCT 62.371 66.667 14.63 4.18 0.00 4.75
772 792 2.943653 GGTGGCTTTTCCGACGTG 59.056 61.111 0.00 0.00 37.80 4.49
787 815 2.782615 GTGCGTGCGGTGTAATCC 59.217 61.111 0.00 0.00 0.00 3.01
788 816 2.030401 GTGCGTGCGGTGTAATCCA 61.030 57.895 0.00 0.00 0.00 3.41
789 817 1.078778 TGCGTGCGGTGTAATCCAT 60.079 52.632 0.00 0.00 0.00 3.41
790 818 1.087202 TGCGTGCGGTGTAATCCATC 61.087 55.000 0.00 0.00 0.00 3.51
814 842 1.299468 ATCGCTTTCCGCTAGCTCG 60.299 57.895 13.93 2.52 36.49 5.03
850 878 2.105930 CGTGCAGCCTAGCTCCTC 59.894 66.667 0.00 0.00 36.40 3.71
871 899 3.328050 TCCTTCTCTCCTCCAACCTTTTC 59.672 47.826 0.00 0.00 0.00 2.29
931 959 2.202932 CCTCGCGCAGGTGCTATT 60.203 61.111 8.75 0.00 37.53 1.73
932 960 1.067416 CCTCGCGCAGGTGCTATTA 59.933 57.895 8.75 0.00 37.53 0.98
933 961 0.319900 CCTCGCGCAGGTGCTATTAT 60.320 55.000 8.75 0.00 37.53 1.28
981 1009 0.320596 ACAAGAGCAGAGCAGAGCAC 60.321 55.000 0.00 0.00 0.00 4.40
982 1010 1.079956 AAGAGCAGAGCAGAGCACG 60.080 57.895 0.00 0.00 0.00 5.34
988 1030 2.508887 GAGCAGAGCACGCAGAGG 60.509 66.667 0.00 0.00 0.00 3.69
996 1038 3.074999 GCACGCAGAGGGAGAGAGG 62.075 68.421 0.00 0.00 0.00 3.69
1146 1314 1.734465 CCTCTGCTCCGATTTGTTGTC 59.266 52.381 0.00 0.00 0.00 3.18
1149 1325 1.734465 CTGCTCCGATTTGTTGTCCTC 59.266 52.381 0.00 0.00 0.00 3.71
1156 1332 4.285003 TCCGATTTGTTGTCCTCTTCCTTA 59.715 41.667 0.00 0.00 0.00 2.69
1174 1939 1.752683 TACAGAGCTCCGAGTCTTCC 58.247 55.000 10.93 0.00 0.00 3.46
1250 2015 5.007034 TGTGGGTGGTGAACATATGTAAAG 58.993 41.667 9.21 0.00 0.00 1.85
1253 2018 4.638865 GGGTGGTGAACATATGTAAAGACC 59.361 45.833 9.21 12.53 0.00 3.85
1260 2025 5.431731 TGAACATATGTAAAGACCCCTGGAT 59.568 40.000 9.21 0.00 0.00 3.41
1261 2026 5.994416 ACATATGTAAAGACCCCTGGATT 57.006 39.130 6.56 0.00 0.00 3.01
1262 2027 6.341408 ACATATGTAAAGACCCCTGGATTT 57.659 37.500 6.56 0.00 0.00 2.17
1263 2028 6.741724 ACATATGTAAAGACCCCTGGATTTT 58.258 36.000 6.56 0.00 0.00 1.82
1290 2055 4.047166 TGTTAGATGGGTTGGATGATCCT 58.953 43.478 13.44 0.00 37.46 3.24
1336 2104 1.165270 GCACAGCCCGAAGTATTGTT 58.835 50.000 0.00 0.00 0.00 2.83
1353 2121 3.791973 TGTTTGTGATTTGGTGACACC 57.208 42.857 18.28 18.28 42.67 4.16
1364 2132 0.947244 GGTGACACCACTTGCTTCAG 59.053 55.000 20.14 0.00 42.77 3.02
1365 2133 0.947244 GTGACACCACTTGCTTCAGG 59.053 55.000 0.00 0.00 40.10 3.86
1374 2142 4.021719 ACCACTTGCTTCAGGATCAATTTG 60.022 41.667 0.00 0.00 0.00 2.32
1376 2144 4.021719 CACTTGCTTCAGGATCAATTTGGT 60.022 41.667 0.00 0.00 0.00 3.67
1388 2156 7.549842 CAGGATCAATTTGGTTTTTGCATGATA 59.450 33.333 0.00 0.00 0.00 2.15
1389 2157 7.767198 AGGATCAATTTGGTTTTTGCATGATAG 59.233 33.333 0.00 0.00 0.00 2.08
1395 2163 8.712285 ATTTGGTTTTTGCATGATAGAATCTG 57.288 30.769 0.00 0.00 0.00 2.90
1400 2168 9.206870 GGTTTTTGCATGATAGAATCTGAAAAA 57.793 29.630 0.00 0.00 30.29 1.94
1524 2383 3.645268 AAGCATGTTCCGAGGGCCC 62.645 63.158 16.46 16.46 0.00 5.80
1595 2454 2.739996 CCGCCAGCTCTTCCATCCT 61.740 63.158 0.00 0.00 0.00 3.24
1712 2571 8.558973 TTTTTGCCAAAAAGATCTTTTCTGAA 57.441 26.923 28.87 17.06 41.45 3.02
1740 2599 6.183360 CCAACTATTTAGAAGTCAACTGAGCG 60.183 42.308 0.00 0.00 0.00 5.03
1778 2637 6.426980 TTTGAGGATCTTGAATGTTGATCG 57.573 37.500 0.00 0.00 37.91 3.69
1779 2638 5.089970 TGAGGATCTTGAATGTTGATCGT 57.910 39.130 0.00 0.00 37.91 3.73
1780 2639 5.111989 TGAGGATCTTGAATGTTGATCGTC 58.888 41.667 14.20 14.20 45.02 4.20
1781 2640 4.115516 AGGATCTTGAATGTTGATCGTCG 58.884 43.478 0.00 0.00 37.91 5.12
1782 2641 4.112634 GGATCTTGAATGTTGATCGTCGA 58.887 43.478 0.00 0.00 37.91 4.20
1783 2642 4.747108 GGATCTTGAATGTTGATCGTCGAT 59.253 41.667 7.63 7.63 37.91 3.59
1784 2643 5.235186 GGATCTTGAATGTTGATCGTCGATT 59.765 40.000 9.52 0.00 37.91 3.34
1785 2644 5.702622 TCTTGAATGTTGATCGTCGATTC 57.297 39.130 9.52 3.21 0.00 2.52
1786 2645 4.265320 TCTTGAATGTTGATCGTCGATTCG 59.735 41.667 9.52 0.00 0.00 3.34
1787 2646 3.507786 TGAATGTTGATCGTCGATTCGT 58.492 40.909 9.52 2.54 0.00 3.85
1788 2647 3.546271 TGAATGTTGATCGTCGATTCGTC 59.454 43.478 9.52 0.00 0.00 4.20
1789 2648 2.622546 TGTTGATCGTCGATTCGTCA 57.377 45.000 9.52 0.28 0.00 4.35
1812 2671 8.956426 GTCATCTAATGAAATTTGGGTAGTTGA 58.044 33.333 0.00 2.56 41.69 3.18
1856 2715 8.402798 TCTAACTTATGTTTGGAAATGAGCAA 57.597 30.769 0.00 0.00 37.59 3.91
1887 4043 4.511617 TCTTTTTGTCAGTTGTGCACAA 57.488 36.364 27.96 27.96 0.00 3.33
1892 4048 7.600375 TCTTTTTGTCAGTTGTGCACAATTTAA 59.400 29.630 33.16 19.94 38.24 1.52
2048 4209 8.877864 TGGGTATTGAAAATGTCTCTAATTGT 57.122 30.769 0.00 0.00 0.00 2.71
2049 4210 9.967451 TGGGTATTGAAAATGTCTCTAATTGTA 57.033 29.630 0.00 0.00 0.00 2.41
2136 4949 8.080417 CCATAACTTAATCATTTCATGCTGAGG 58.920 37.037 0.00 0.00 0.00 3.86
2145 4958 2.113860 TCATGCTGAGGTTTAGTGCC 57.886 50.000 0.00 0.00 0.00 5.01
2152 4965 3.872240 GCTGAGGTTTAGTGCCCATACAA 60.872 47.826 0.00 0.00 0.00 2.41
2199 5012 3.751518 AGGCAACCCAGTTTAACTACTG 58.248 45.455 0.00 0.97 44.07 2.74
2200 5013 2.228103 GGCAACCCAGTTTAACTACTGC 59.772 50.000 0.00 4.57 43.31 4.40
2201 5014 2.228103 GCAACCCAGTTTAACTACTGCC 59.772 50.000 0.00 0.00 43.31 4.85
2202 5015 3.751518 CAACCCAGTTTAACTACTGCCT 58.248 45.455 0.00 0.00 43.31 4.75
2203 5016 3.697619 ACCCAGTTTAACTACTGCCTC 57.302 47.619 0.00 0.00 43.31 4.70
2204 5017 2.305052 ACCCAGTTTAACTACTGCCTCC 59.695 50.000 0.00 0.00 43.31 4.30
2205 5018 2.618053 CCAGTTTAACTACTGCCTCCG 58.382 52.381 0.00 0.00 43.31 4.63
2206 5019 2.028385 CCAGTTTAACTACTGCCTCCGT 60.028 50.000 0.00 0.00 43.31 4.69
2207 5020 3.556423 CCAGTTTAACTACTGCCTCCGTT 60.556 47.826 0.00 0.00 43.31 4.44
2208 5021 3.678548 CAGTTTAACTACTGCCTCCGTTC 59.321 47.826 0.00 0.00 39.12 3.95
2209 5022 3.577415 AGTTTAACTACTGCCTCCGTTCT 59.423 43.478 0.00 0.00 0.00 3.01
2210 5023 4.040095 AGTTTAACTACTGCCTCCGTTCTT 59.960 41.667 0.00 0.00 0.00 2.52
2211 5024 4.612264 TTAACTACTGCCTCCGTTCTTT 57.388 40.909 0.00 0.00 0.00 2.52
2212 5025 3.487120 AACTACTGCCTCCGTTCTTTT 57.513 42.857 0.00 0.00 0.00 2.27
2213 5026 3.487120 ACTACTGCCTCCGTTCTTTTT 57.513 42.857 0.00 0.00 0.00 1.94
2234 5047 7.724305 TTTTTATAAGTCGTTTCTGACAGCT 57.276 32.000 0.00 0.00 41.41 4.24
2235 5048 6.706055 TTTATAAGTCGTTTCTGACAGCTG 57.294 37.500 13.48 13.48 41.41 4.24
2236 5049 2.890808 AAGTCGTTTCTGACAGCTGA 57.109 45.000 23.35 0.00 41.41 4.26
2237 5050 2.890808 AGTCGTTTCTGACAGCTGAA 57.109 45.000 23.35 7.24 41.41 3.02
2238 5051 3.179443 AGTCGTTTCTGACAGCTGAAA 57.821 42.857 23.35 7.52 41.41 2.69
2239 5052 3.733337 AGTCGTTTCTGACAGCTGAAAT 58.267 40.909 23.35 0.00 41.78 2.17
2240 5053 4.130118 AGTCGTTTCTGACAGCTGAAATT 58.870 39.130 23.35 0.00 41.78 1.82
2241 5054 4.024556 AGTCGTTTCTGACAGCTGAAATTG 60.025 41.667 23.35 7.48 41.78 2.32
2242 5055 4.024893 GTCGTTTCTGACAGCTGAAATTGA 60.025 41.667 23.35 9.59 41.78 2.57
2243 5056 4.212004 TCGTTTCTGACAGCTGAAATTGAG 59.788 41.667 23.35 0.76 41.78 3.02
2244 5057 4.225208 GTTTCTGACAGCTGAAATTGAGC 58.775 43.478 23.35 0.00 41.78 4.26
2251 5064 3.022607 AGCTGAAATTGAGCTGTTTGC 57.977 42.857 6.08 0.00 45.28 3.68
2252 5065 2.363038 AGCTGAAATTGAGCTGTTTGCA 59.637 40.909 6.08 0.00 45.28 4.08
2253 5066 2.473984 GCTGAAATTGAGCTGTTTGCAC 59.526 45.455 0.00 0.00 45.94 4.57
2254 5067 2.722629 CTGAAATTGAGCTGTTTGCACG 59.277 45.455 0.00 0.00 45.94 5.34
2255 5068 1.453148 GAAATTGAGCTGTTTGCACGC 59.547 47.619 0.00 0.00 45.94 5.34
2256 5069 0.670162 AATTGAGCTGTTTGCACGCT 59.330 45.000 0.00 0.00 45.94 5.07
2257 5070 0.039798 ATTGAGCTGTTTGCACGCTG 60.040 50.000 0.00 0.00 45.94 5.18
2258 5071 1.375853 TTGAGCTGTTTGCACGCTGT 61.376 50.000 0.00 0.00 45.94 4.40
2259 5072 1.082496 GAGCTGTTTGCACGCTGTC 60.082 57.895 0.00 0.00 45.94 3.51
2260 5073 1.502163 GAGCTGTTTGCACGCTGTCT 61.502 55.000 0.00 0.00 45.94 3.41
2261 5074 1.369689 GCTGTTTGCACGCTGTCTG 60.370 57.895 0.00 0.00 42.31 3.51
2262 5075 1.775039 GCTGTTTGCACGCTGTCTGA 61.775 55.000 0.00 0.00 42.31 3.27
2263 5076 0.657312 CTGTTTGCACGCTGTCTGAA 59.343 50.000 0.00 0.00 0.00 3.02
2264 5077 1.063912 CTGTTTGCACGCTGTCTGAAA 59.936 47.619 0.00 0.00 0.00 2.69
2265 5078 1.675483 TGTTTGCACGCTGTCTGAAAT 59.325 42.857 0.00 0.00 0.00 2.17
2266 5079 2.046313 GTTTGCACGCTGTCTGAAATG 58.954 47.619 0.00 0.00 0.00 2.32
2267 5080 1.308047 TTGCACGCTGTCTGAAATGT 58.692 45.000 0.00 0.00 0.00 2.71
2268 5081 0.867746 TGCACGCTGTCTGAAATGTC 59.132 50.000 0.00 0.00 0.00 3.06
2269 5082 1.151668 GCACGCTGTCTGAAATGTCT 58.848 50.000 0.00 0.00 0.00 3.41
2270 5083 2.288763 TGCACGCTGTCTGAAATGTCTA 60.289 45.455 0.00 0.00 0.00 2.59
2271 5084 2.092838 GCACGCTGTCTGAAATGTCTAC 59.907 50.000 0.00 0.00 0.00 2.59
2272 5085 3.317150 CACGCTGTCTGAAATGTCTACA 58.683 45.455 0.00 0.00 0.00 2.74
2273 5086 3.740832 CACGCTGTCTGAAATGTCTACAA 59.259 43.478 0.00 0.00 0.00 2.41
2274 5087 3.990469 ACGCTGTCTGAAATGTCTACAAG 59.010 43.478 0.00 0.00 0.00 3.16
2275 5088 3.369147 CGCTGTCTGAAATGTCTACAAGG 59.631 47.826 0.00 0.00 0.00 3.61
2276 5089 4.319177 GCTGTCTGAAATGTCTACAAGGT 58.681 43.478 0.00 0.00 0.00 3.50
2277 5090 4.390297 GCTGTCTGAAATGTCTACAAGGTC 59.610 45.833 0.00 0.00 0.00 3.85
2278 5091 4.556233 TGTCTGAAATGTCTACAAGGTCG 58.444 43.478 0.00 0.00 0.00 4.79
2279 5092 4.279922 TGTCTGAAATGTCTACAAGGTCGA 59.720 41.667 0.00 0.00 0.00 4.20
2280 5093 4.859798 GTCTGAAATGTCTACAAGGTCGAG 59.140 45.833 0.00 0.00 0.00 4.04
2341 5155 9.152595 GTTCCTACTAACAAATACTCCTTTCTG 57.847 37.037 0.00 0.00 0.00 3.02
2466 5280 0.313672 TTTTCAATGCTGTCGGTGGC 59.686 50.000 0.00 0.00 0.00 5.01
2532 5346 2.484889 GTCGACTATGGCAGGAAATCC 58.515 52.381 8.70 0.00 0.00 3.01
2574 5388 7.589081 TCTATCCTTCACCACAGGTACTATTA 58.411 38.462 0.00 0.00 36.02 0.98
2575 5389 5.927281 TCCTTCACCACAGGTACTATTAC 57.073 43.478 0.00 0.00 36.02 1.89
2629 5446 4.054671 CTCTGTCCTGAGTCAAACTTCAC 58.945 47.826 0.00 0.00 0.00 3.18
2662 5857 5.048434 AGCAAGTTTCAGCTAGACCATTTTC 60.048 40.000 0.00 0.00 39.78 2.29
2663 5858 5.278463 GCAAGTTTCAGCTAGACCATTTTCA 60.278 40.000 0.00 0.00 0.00 2.69
2877 6207 1.029681 TGATATCGTCCCTGACCACG 58.970 55.000 0.00 0.00 37.36 4.94
3054 6384 3.966026 CTCCGTGTTCGAGCCGTCC 62.966 68.421 0.00 0.00 39.71 4.79
3201 6531 2.516923 CAGTTCGTCGACTGGTATGTC 58.483 52.381 14.70 0.00 42.58 3.06
3203 6533 0.448990 TTCGTCGACTGGTATGTCCG 59.551 55.000 14.70 0.00 39.52 4.79
3204 6534 0.391528 TCGTCGACTGGTATGTCCGA 60.392 55.000 14.70 0.00 39.52 4.55
3205 6535 0.448990 CGTCGACTGGTATGTCCGAA 59.551 55.000 14.70 0.00 39.52 4.30
3207 6537 2.479049 CGTCGACTGGTATGTCCGAAAT 60.479 50.000 14.70 0.00 39.52 2.17
3208 6538 3.114065 GTCGACTGGTATGTCCGAAATC 58.886 50.000 8.70 0.00 39.52 2.17
3209 6539 2.100252 TCGACTGGTATGTCCGAAATCC 59.900 50.000 0.00 0.00 39.52 3.01
3211 6541 2.434702 GACTGGTATGTCCGAAATCCCT 59.565 50.000 0.00 0.00 39.52 4.20
3212 6542 2.844348 ACTGGTATGTCCGAAATCCCTT 59.156 45.455 0.00 0.00 39.52 3.95
3213 6543 3.118371 ACTGGTATGTCCGAAATCCCTTC 60.118 47.826 0.00 0.00 39.52 3.46
3215 6545 3.134081 TGGTATGTCCGAAATCCCTTCTC 59.866 47.826 0.00 0.00 39.52 2.87
3216 6546 2.604046 ATGTCCGAAATCCCTTCTCG 57.396 50.000 0.00 0.00 31.20 4.04
3224 6554 3.860536 CGAAATCCCTTCTCGAGTTTCTC 59.139 47.826 13.13 0.00 34.52 2.87
3226 6556 2.304221 TCCCTTCTCGAGTTTCTCCA 57.696 50.000 13.13 0.00 0.00 3.86
3249 6579 6.183360 CCATTGTTATCACCTGACATTGAGAC 60.183 42.308 0.00 0.00 30.41 3.36
3255 6585 3.643320 TCACCTGACATTGAGACTCTGTT 59.357 43.478 3.68 0.00 0.00 3.16
3258 6588 4.346418 ACCTGACATTGAGACTCTGTTTCT 59.654 41.667 3.68 0.00 0.00 2.52
3263 6593 5.546526 ACATTGAGACTCTGTTTCTCCTTC 58.453 41.667 3.68 0.00 39.08 3.46
3266 6596 5.461032 TGAGACTCTGTTTCTCCTTCTTC 57.539 43.478 3.68 0.00 39.08 2.87
3614 7033 2.425312 AGGCGATGAGTACTGAGTTGAG 59.575 50.000 0.00 0.00 0.00 3.02
3615 7034 2.164624 GGCGATGAGTACTGAGTTGAGT 59.835 50.000 0.00 0.00 0.00 3.41
3617 7036 4.344448 GCGATGAGTACTGAGTTGAGTAC 58.656 47.826 0.00 0.00 45.98 2.73
3664 7322 2.132762 ACGGAGAGTTTTTGTACTGCG 58.867 47.619 0.00 0.00 46.23 5.18
3667 7325 3.650139 GGAGAGTTTTTGTACTGCGAGA 58.350 45.455 0.00 0.00 0.00 4.04
3668 7326 4.056050 GGAGAGTTTTTGTACTGCGAGAA 58.944 43.478 0.00 0.00 0.00 2.87
3670 7328 5.179555 GGAGAGTTTTTGTACTGCGAGAAAT 59.820 40.000 0.00 0.00 0.00 2.17
3671 7329 6.293462 GGAGAGTTTTTGTACTGCGAGAAATT 60.293 38.462 0.00 0.00 0.00 1.82
3673 7331 4.976116 AGTTTTTGTACTGCGAGAAATTGC 59.024 37.500 0.00 0.00 0.00 3.56
3674 7332 4.560136 TTTTGTACTGCGAGAAATTGCA 57.440 36.364 0.00 0.00 39.13 4.08
3687 7345 4.922206 AGAAATTGCAGGGTATGACTTCA 58.078 39.130 0.00 0.00 0.00 3.02
3696 7354 6.491745 TGCAGGGTATGACTTCATTTGTTTTA 59.508 34.615 0.00 0.00 37.76 1.52
3699 7357 9.357652 CAGGGTATGACTTCATTTGTTTTATTG 57.642 33.333 0.00 0.00 37.76 1.90
3714 7372 7.176285 TGTTTTATTGTGAAAGCAAAGCATC 57.824 32.000 0.00 0.00 31.63 3.91
3718 7404 5.972107 ATTGTGAAAGCAAAGCATCTAGT 57.028 34.783 0.00 0.00 31.63 2.57
3741 7427 8.902540 AGTCCATACGATGCAGATTTTATTAA 57.097 30.769 0.00 0.00 0.00 1.40
3746 7432 6.619801 ACGATGCAGATTTTATTAAGTCCC 57.380 37.500 0.00 0.00 0.00 4.46
3767 7453 5.095490 CCCAACGAAGCATTTATTTCAGTC 58.905 41.667 0.00 0.00 0.00 3.51
3768 7454 5.335583 CCCAACGAAGCATTTATTTCAGTCA 60.336 40.000 0.00 0.00 0.00 3.41
3773 7459 7.425606 ACGAAGCATTTATTTCAGTCACTTTT 58.574 30.769 0.00 0.00 0.00 2.27
3889 8592 5.255397 TCCATACAACCAGATCCAAAGTT 57.745 39.130 0.00 0.00 0.00 2.66
3890 8593 5.640147 TCCATACAACCAGATCCAAAGTTT 58.360 37.500 0.00 0.00 0.00 2.66
3891 8594 6.074648 TCCATACAACCAGATCCAAAGTTTT 58.925 36.000 0.00 0.00 0.00 2.43
3892 8595 7.235079 TCCATACAACCAGATCCAAAGTTTTA 58.765 34.615 0.00 0.00 0.00 1.52
3893 8596 7.175990 TCCATACAACCAGATCCAAAGTTTTAC 59.824 37.037 0.00 0.00 0.00 2.01
3894 8597 7.176690 CCATACAACCAGATCCAAAGTTTTACT 59.823 37.037 0.00 0.00 0.00 2.24
3895 8598 6.635030 ACAACCAGATCCAAAGTTTTACTC 57.365 37.500 0.00 0.00 0.00 2.59
3896 8599 6.126409 ACAACCAGATCCAAAGTTTTACTCA 58.874 36.000 0.00 0.00 0.00 3.41
3897 8600 6.777580 ACAACCAGATCCAAAGTTTTACTCAT 59.222 34.615 0.00 0.00 0.00 2.90
3898 8601 7.287696 ACAACCAGATCCAAAGTTTTACTCATT 59.712 33.333 0.00 0.00 0.00 2.57
3899 8602 7.219484 ACCAGATCCAAAGTTTTACTCATTG 57.781 36.000 0.00 0.00 0.00 2.82
3900 8603 6.777580 ACCAGATCCAAAGTTTTACTCATTGT 59.222 34.615 0.00 0.00 0.00 2.71
3901 8604 7.942341 ACCAGATCCAAAGTTTTACTCATTGTA 59.058 33.333 0.00 0.00 0.00 2.41
3902 8605 8.454106 CCAGATCCAAAGTTTTACTCATTGTAG 58.546 37.037 0.00 0.00 32.08 2.74
3903 8606 7.965107 CAGATCCAAAGTTTTACTCATTGTAGC 59.035 37.037 0.00 0.00 32.08 3.58
3904 8607 7.665559 AGATCCAAAGTTTTACTCATTGTAGCA 59.334 33.333 0.00 0.00 32.08 3.49
3905 8608 7.202016 TCCAAAGTTTTACTCATTGTAGCAG 57.798 36.000 0.00 0.00 32.08 4.24
3906 8609 6.995686 TCCAAAGTTTTACTCATTGTAGCAGA 59.004 34.615 0.00 0.00 32.08 4.26
3907 8610 7.173218 TCCAAAGTTTTACTCATTGTAGCAGAG 59.827 37.037 0.00 0.00 35.56 3.35
3908 8611 7.173218 CCAAAGTTTTACTCATTGTAGCAGAGA 59.827 37.037 0.00 0.00 33.69 3.10
3909 8612 8.559536 CAAAGTTTTACTCATTGTAGCAGAGAA 58.440 33.333 0.00 0.00 33.69 2.87
3910 8613 7.897575 AGTTTTACTCATTGTAGCAGAGAAG 57.102 36.000 0.00 0.00 33.69 2.85
3911 8614 6.370166 AGTTTTACTCATTGTAGCAGAGAAGC 59.630 38.462 0.00 0.00 33.69 3.86
3913 8616 6.775594 TTACTCATTGTAGCAGAGAAGCTA 57.224 37.500 0.00 0.00 44.50 3.32
3923 8626 5.146010 AGCAGAGAAGCTAATATGGTAGC 57.854 43.478 0.00 0.00 44.50 3.58
3931 8634 4.457834 GCTAATATGGTAGCGGATGACT 57.542 45.455 0.00 0.00 37.36 3.41
3932 8635 4.822026 GCTAATATGGTAGCGGATGACTT 58.178 43.478 0.00 0.00 37.36 3.01
3933 8636 5.962433 GCTAATATGGTAGCGGATGACTTA 58.038 41.667 0.00 0.00 37.36 2.24
3934 8637 6.037098 GCTAATATGGTAGCGGATGACTTAG 58.963 44.000 0.00 0.00 37.36 2.18
3935 8638 2.821991 ATGGTAGCGGATGACTTAGC 57.178 50.000 0.00 0.00 0.00 3.09
3936 8639 1.480789 TGGTAGCGGATGACTTAGCA 58.519 50.000 0.00 0.00 0.00 3.49
3937 8640 1.828595 TGGTAGCGGATGACTTAGCAA 59.171 47.619 0.00 0.00 0.00 3.91
3938 8641 2.235155 TGGTAGCGGATGACTTAGCAAA 59.765 45.455 0.00 0.00 0.00 3.68
3939 8642 2.866762 GGTAGCGGATGACTTAGCAAAG 59.133 50.000 0.00 0.00 38.77 2.77
3940 8643 1.373570 AGCGGATGACTTAGCAAAGC 58.626 50.000 0.00 0.00 36.05 3.51
3941 8644 1.086696 GCGGATGACTTAGCAAAGCA 58.913 50.000 0.00 0.00 36.05 3.91
3942 8645 1.672881 GCGGATGACTTAGCAAAGCAT 59.327 47.619 0.00 0.00 36.05 3.79
3943 8646 2.872245 GCGGATGACTTAGCAAAGCATA 59.128 45.455 0.00 0.00 36.05 3.14
3944 8647 3.059325 GCGGATGACTTAGCAAAGCATAG 60.059 47.826 0.00 0.00 36.05 2.23
3945 8648 4.122776 CGGATGACTTAGCAAAGCATAGT 58.877 43.478 0.00 0.00 36.05 2.12
3946 8649 4.572389 CGGATGACTTAGCAAAGCATAGTT 59.428 41.667 0.00 0.00 36.05 2.24
3947 8650 5.065218 CGGATGACTTAGCAAAGCATAGTTT 59.935 40.000 0.00 0.00 36.05 2.66
3948 8651 6.403636 CGGATGACTTAGCAAAGCATAGTTTT 60.404 38.462 0.00 0.00 36.05 2.43
3949 8652 7.201609 CGGATGACTTAGCAAAGCATAGTTTTA 60.202 37.037 0.00 0.00 36.05 1.52
3950 8653 8.125448 GGATGACTTAGCAAAGCATAGTTTTAG 58.875 37.037 0.00 0.00 36.05 1.85
3951 8654 7.979444 TGACTTAGCAAAGCATAGTTTTAGT 57.021 32.000 0.00 0.00 36.05 2.24
3952 8655 8.029642 TGACTTAGCAAAGCATAGTTTTAGTC 57.970 34.615 0.00 0.00 36.05 2.59
3953 8656 7.878127 TGACTTAGCAAAGCATAGTTTTAGTCT 59.122 33.333 0.00 0.00 36.05 3.24
3954 8657 8.622948 ACTTAGCAAAGCATAGTTTTAGTCTT 57.377 30.769 0.00 0.00 36.05 3.01
3955 8658 9.720769 ACTTAGCAAAGCATAGTTTTAGTCTTA 57.279 29.630 0.00 0.00 36.05 2.10
3957 8660 7.078011 AGCAAAGCATAGTTTTAGTCTTAGC 57.922 36.000 0.00 0.00 0.00 3.09
3958 8661 6.655003 AGCAAAGCATAGTTTTAGTCTTAGCA 59.345 34.615 0.00 0.00 0.00 3.49
3959 8662 7.174946 AGCAAAGCATAGTTTTAGTCTTAGCAA 59.825 33.333 0.00 0.00 0.00 3.91
3960 8663 7.483059 GCAAAGCATAGTTTTAGTCTTAGCAAG 59.517 37.037 0.00 0.00 0.00 4.01
3961 8664 8.507249 CAAAGCATAGTTTTAGTCTTAGCAAGT 58.493 33.333 0.00 0.00 0.00 3.16
3962 8665 7.835634 AGCATAGTTTTAGTCTTAGCAAGTC 57.164 36.000 0.00 0.00 0.00 3.01
3963 8666 7.616313 AGCATAGTTTTAGTCTTAGCAAGTCT 58.384 34.615 0.00 0.00 0.00 3.24
3964 8667 8.750298 AGCATAGTTTTAGTCTTAGCAAGTCTA 58.250 33.333 0.00 0.00 0.00 2.59
3965 8668 9.367444 GCATAGTTTTAGTCTTAGCAAGTCTAA 57.633 33.333 9.63 9.63 37.36 2.10
3979 8682 3.121738 AGTCTAAAACTTGGTGGGACG 57.878 47.619 0.00 0.00 33.03 4.79
3980 8683 1.534163 GTCTAAAACTTGGTGGGACGC 59.466 52.381 0.00 0.00 38.67 5.19
3981 8684 1.418637 TCTAAAACTTGGTGGGACGCT 59.581 47.619 0.00 0.00 39.78 5.07
3982 8685 1.535462 CTAAAACTTGGTGGGACGCTG 59.465 52.381 0.00 0.00 39.78 5.18
3983 8686 0.395173 AAAACTTGGTGGGACGCTGT 60.395 50.000 0.00 0.00 39.78 4.40
3984 8687 0.818040 AAACTTGGTGGGACGCTGTC 60.818 55.000 0.79 0.79 39.78 3.51
3992 8695 3.692406 GGACGCTGTCCCGGACTT 61.692 66.667 18.54 0.51 46.19 3.01
3993 8696 2.342648 GACGCTGTCCCGGACTTT 59.657 61.111 18.54 0.16 33.15 2.66
3994 8697 1.588082 GACGCTGTCCCGGACTTTA 59.412 57.895 18.54 0.00 33.15 1.85
3995 8698 0.175073 GACGCTGTCCCGGACTTTAT 59.825 55.000 18.54 2.17 33.15 1.40
3996 8699 0.611714 ACGCTGTCCCGGACTTTATT 59.388 50.000 18.54 0.00 33.15 1.40
3997 8700 1.287425 CGCTGTCCCGGACTTTATTC 58.713 55.000 18.54 1.20 33.15 1.75
3998 8701 1.134788 CGCTGTCCCGGACTTTATTCT 60.135 52.381 18.54 0.00 33.15 2.40
3999 8702 2.280628 GCTGTCCCGGACTTTATTCTG 58.719 52.381 18.54 0.00 33.15 3.02
4000 8703 2.280628 CTGTCCCGGACTTTATTCTGC 58.719 52.381 18.54 0.00 33.15 4.26
4001 8704 1.626321 TGTCCCGGACTTTATTCTGCA 59.374 47.619 18.54 0.00 33.15 4.41
4002 8705 2.238646 TGTCCCGGACTTTATTCTGCAT 59.761 45.455 18.54 0.00 33.15 3.96
4003 8706 3.279434 GTCCCGGACTTTATTCTGCATT 58.721 45.455 10.59 0.00 0.00 3.56
4004 8707 3.312697 GTCCCGGACTTTATTCTGCATTC 59.687 47.826 10.59 0.00 0.00 2.67
4005 8708 3.199946 TCCCGGACTTTATTCTGCATTCT 59.800 43.478 0.73 0.00 0.00 2.40
4006 8709 3.947834 CCCGGACTTTATTCTGCATTCTT 59.052 43.478 0.73 0.00 0.00 2.52
4007 8710 5.104693 TCCCGGACTTTATTCTGCATTCTTA 60.105 40.000 0.73 0.00 0.00 2.10
4008 8711 5.765182 CCCGGACTTTATTCTGCATTCTTAT 59.235 40.000 0.73 0.00 0.00 1.73
4009 8712 6.293626 CCCGGACTTTATTCTGCATTCTTATG 60.294 42.308 0.73 0.00 34.76 1.90
4010 8713 6.260936 CCGGACTTTATTCTGCATTCTTATGT 59.739 38.462 0.00 0.00 34.12 2.29
4011 8714 7.441157 CCGGACTTTATTCTGCATTCTTATGTA 59.559 37.037 0.00 0.00 34.12 2.29
4012 8715 8.826710 CGGACTTTATTCTGCATTCTTATGTAA 58.173 33.333 0.00 0.00 34.12 2.41
4022 8725 8.347771 TCTGCATTCTTATGTAAATGATCTTGC 58.652 33.333 0.00 0.00 35.35 4.01
4023 8726 8.229253 TGCATTCTTATGTAAATGATCTTGCT 57.771 30.769 0.00 0.00 35.35 3.91
4024 8727 8.347771 TGCATTCTTATGTAAATGATCTTGCTC 58.652 33.333 0.00 0.00 35.35 4.26
4025 8728 8.566260 GCATTCTTATGTAAATGATCTTGCTCT 58.434 33.333 0.00 0.00 35.35 4.09
4089 8792 1.871039 GTCACAAAGCAACTAAGGCGA 59.129 47.619 0.00 0.00 36.08 5.54
4091 8794 1.069227 CACAAAGCAACTAAGGCGACC 60.069 52.381 0.00 0.00 36.08 4.79
4112 8815 2.799207 CGGGGCAACAACATAATCATGC 60.799 50.000 0.00 0.00 34.75 4.06
4178 8882 3.369385 GCATGCAGCATCATGAAACTAC 58.631 45.455 14.21 0.00 44.94 2.73
4196 8900 0.320596 ACGAAGAGGAGAGACGACGT 60.321 55.000 0.00 0.00 0.00 4.34
4240 8982 4.691860 ACATGAAGAAAGCAAGGAATCG 57.308 40.909 0.00 0.00 0.00 3.34
4253 8995 4.672801 GCAAGGAATCGCCAAAGTCTTTAG 60.673 45.833 0.00 0.00 40.02 1.85
4359 9101 1.002087 CCACACTTCCCAGGTACTCAC 59.998 57.143 0.00 0.00 34.60 3.51
4393 9135 4.321601 GCGATCAGATGTAGCTCATAAGGT 60.322 45.833 0.00 0.00 36.83 3.50
4400 9142 7.070447 TCAGATGTAGCTCATAAGGTGAAGATT 59.930 37.037 0.00 0.00 36.14 2.40
4405 9147 5.355596 AGCTCATAAGGTGAAGATTTCGAG 58.644 41.667 0.00 0.00 36.14 4.04
4406 9148 5.127845 AGCTCATAAGGTGAAGATTTCGAGA 59.872 40.000 0.00 0.00 36.14 4.04
4407 9149 5.812642 GCTCATAAGGTGAAGATTTCGAGAA 59.187 40.000 0.00 0.00 36.14 2.87
4408 9150 6.237969 GCTCATAAGGTGAAGATTTCGAGAAC 60.238 42.308 0.00 0.00 36.14 3.01
4409 9151 6.936279 TCATAAGGTGAAGATTTCGAGAACT 58.064 36.000 0.00 0.00 32.78 3.01
4410 9152 7.036220 TCATAAGGTGAAGATTTCGAGAACTC 58.964 38.462 0.00 0.00 32.78 3.01
4411 9153 4.873746 AGGTGAAGATTTCGAGAACTCA 57.126 40.909 6.08 0.00 0.00 3.41
4478 9237 3.374367 CACCATCTTGATCAGCTTCACAG 59.626 47.826 0.00 0.00 0.00 3.66
4479 9238 3.008813 ACCATCTTGATCAGCTTCACAGT 59.991 43.478 0.00 0.00 0.00 3.55
4480 9239 4.008330 CCATCTTGATCAGCTTCACAGTT 58.992 43.478 0.00 0.00 0.00 3.16
4481 9240 4.094590 CCATCTTGATCAGCTTCACAGTTC 59.905 45.833 0.00 0.00 0.00 3.01
4482 9241 4.341366 TCTTGATCAGCTTCACAGTTCA 57.659 40.909 0.00 0.00 0.00 3.18
4483 9242 4.060900 TCTTGATCAGCTTCACAGTTCAC 58.939 43.478 0.00 0.00 0.00 3.18
4484 9243 3.473923 TGATCAGCTTCACAGTTCACA 57.526 42.857 0.00 0.00 0.00 3.58
4485 9244 3.133691 TGATCAGCTTCACAGTTCACAC 58.866 45.455 0.00 0.00 0.00 3.82
4486 9245 1.570813 TCAGCTTCACAGTTCACACG 58.429 50.000 0.00 0.00 0.00 4.49
4487 9246 0.041839 CAGCTTCACAGTTCACACGC 60.042 55.000 0.00 0.00 0.00 5.34
4488 9247 0.461870 AGCTTCACAGTTCACACGCA 60.462 50.000 0.00 0.00 0.00 5.24
4505 9264 0.385974 GCACTTCAATGCTTTCGCGT 60.386 50.000 5.77 0.00 42.62 6.01
4551 9310 9.995003 ACTCCAATTACTCAAATTATTGCAAAA 57.005 25.926 1.71 0.00 35.54 2.44
4575 9334 7.872113 ATCTGAAAATTACAGTTCCAGGATC 57.128 36.000 10.82 0.00 36.81 3.36
4580 9339 7.669304 TGAAAATTACAGTTCCAGGATCATCAA 59.331 33.333 0.14 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
163 164 1.379044 CTTCCCACCATGCCACTCC 60.379 63.158 0.00 0.00 0.00 3.85
167 168 0.324552 CATTCCTTCCCACCATGCCA 60.325 55.000 0.00 0.00 0.00 4.92
171 172 2.109834 TGTGAACATTCCTTCCCACCAT 59.890 45.455 0.00 0.00 0.00 3.55
213 219 2.412847 GCTTCCACGTTCCAAATTCTCG 60.413 50.000 0.00 0.00 0.00 4.04
243 249 1.613925 ACCATGTCGATCCACGGATAG 59.386 52.381 0.00 0.00 42.82 2.08
272 278 1.071542 TCTTGTTTGGTCATCCGCTGA 59.928 47.619 0.00 0.00 36.30 4.26
308 314 4.501400 GGTGGAAGCTAGCAACACAAAATT 60.501 41.667 26.69 8.77 33.91 1.82
336 342 0.667792 GCCAGAACCACGAGACTGTC 60.668 60.000 0.00 0.00 0.00 3.51
353 359 2.295349 TCGATACTTTGATCCTACCGCC 59.705 50.000 0.00 0.00 0.00 6.13
370 376 1.067565 ACTGACGCACATCACTTCGAT 60.068 47.619 0.00 0.00 33.27 3.59
371 377 0.313987 ACTGACGCACATCACTTCGA 59.686 50.000 0.00 0.00 0.00 3.71
372 378 0.436150 CACTGACGCACATCACTTCG 59.564 55.000 0.00 0.00 0.00 3.79
373 379 0.164647 GCACTGACGCACATCACTTC 59.835 55.000 0.00 0.00 0.00 3.01
374 380 1.560004 CGCACTGACGCACATCACTT 61.560 55.000 0.00 0.00 0.00 3.16
375 381 2.023771 CGCACTGACGCACATCACT 61.024 57.895 0.00 0.00 0.00 3.41
376 382 2.310233 ACGCACTGACGCACATCAC 61.310 57.895 0.00 0.00 36.19 3.06
377 383 2.028925 ACGCACTGACGCACATCA 59.971 55.556 0.00 0.00 36.19 3.07
483 494 0.108424 GGGACTCTGCTGTGCACTAG 60.108 60.000 19.41 14.36 33.79 2.57
502 513 2.393768 GGCACCACTGCTCACGATG 61.394 63.158 0.00 0.00 43.66 3.84
580 592 1.795768 TCACTGATGAGTTCAACGGC 58.204 50.000 0.00 0.00 32.78 5.68
583 595 2.096218 GCCGTTCACTGATGAGTTCAAC 60.096 50.000 0.00 0.00 35.83 3.18
594 606 3.777925 CGAAGGCGCCGTTCACTG 61.778 66.667 27.09 14.41 0.00 3.66
595 607 3.986006 TCGAAGGCGCCGTTCACT 61.986 61.111 27.09 8.38 37.46 3.41
615 627 0.246635 AGACCGCAACAAGACGCTAT 59.753 50.000 0.00 0.00 0.00 2.97
649 661 4.812476 TGGCGAAGGGACGATGCG 62.812 66.667 0.00 0.00 35.09 4.73
675 688 1.734117 GTGCCAAACCGAATGCTGC 60.734 57.895 0.00 0.00 0.00 5.25
676 689 1.080569 GGTGCCAAACCGAATGCTG 60.081 57.895 0.00 0.00 39.81 4.41
696 716 1.448540 CATGTCTCGCTCCCACCAC 60.449 63.158 0.00 0.00 0.00 4.16
761 781 3.990806 CGCACGCACGTCGGAAAA 61.991 61.111 11.13 0.00 43.86 2.29
768 788 2.356553 ATTACACCGCACGCACGT 60.357 55.556 0.00 0.00 0.00 4.49
770 790 1.366111 ATGGATTACACCGCACGCAC 61.366 55.000 0.00 0.00 0.00 5.34
771 791 1.078778 ATGGATTACACCGCACGCA 60.079 52.632 0.00 0.00 0.00 5.24
772 792 1.641677 GATGGATTACACCGCACGC 59.358 57.895 0.00 0.00 0.00 5.34
787 815 0.870393 CGGAAAGCGATGGATGGATG 59.130 55.000 0.00 0.00 0.00 3.51
788 816 0.886490 GCGGAAAGCGATGGATGGAT 60.886 55.000 0.00 0.00 35.41 3.41
789 817 1.523711 GCGGAAAGCGATGGATGGA 60.524 57.895 0.00 0.00 35.41 3.41
790 818 3.025619 GCGGAAAGCGATGGATGG 58.974 61.111 0.00 0.00 35.41 3.51
843 871 0.261696 GGAGGAGAGAAGGAGGAGCT 59.738 60.000 0.00 0.00 0.00 4.09
850 878 3.560239 GGAAAAGGTTGGAGGAGAGAAGG 60.560 52.174 0.00 0.00 0.00 3.46
931 959 1.202417 CGCCTCGGAAGCTCAGAAATA 60.202 52.381 0.00 0.00 0.00 1.40
932 960 0.460987 CGCCTCGGAAGCTCAGAAAT 60.461 55.000 0.00 0.00 0.00 2.17
933 961 1.079819 CGCCTCGGAAGCTCAGAAA 60.080 57.895 0.00 0.00 0.00 2.52
981 1009 1.827789 CTCCCTCTCTCCCTCTGCG 60.828 68.421 0.00 0.00 0.00 5.18
982 1010 0.188342 ATCTCCCTCTCTCCCTCTGC 59.812 60.000 0.00 0.00 0.00 4.26
988 1030 0.856982 TCCCTCATCTCCCTCTCTCC 59.143 60.000 0.00 0.00 0.00 3.71
996 1038 3.837146 TGCTTATGATCTCCCTCATCTCC 59.163 47.826 0.00 0.00 37.13 3.71
1146 1314 1.407258 CGGAGCTCTGTAAGGAAGAGG 59.593 57.143 14.84 0.00 41.31 3.69
1149 1325 2.096248 ACTCGGAGCTCTGTAAGGAAG 58.904 52.381 21.88 13.01 0.00 3.46
1156 1332 0.968393 GGGAAGACTCGGAGCTCTGT 60.968 60.000 21.88 13.87 0.00 3.41
1208 1973 4.520111 CCACAATTCAAGAACACCATCAGA 59.480 41.667 0.00 0.00 0.00 3.27
1290 2055 3.579335 GGGGCACGCTAAAATTAAACA 57.421 42.857 0.00 0.00 38.67 2.83
1319 2087 2.552315 CACAAACAATACTTCGGGCTGT 59.448 45.455 0.00 0.00 0.00 4.40
1353 2121 4.021719 ACCAAATTGATCCTGAAGCAAGTG 60.022 41.667 0.00 0.00 0.00 3.16
1354 2122 4.154942 ACCAAATTGATCCTGAAGCAAGT 58.845 39.130 0.00 0.00 0.00 3.16
1364 2132 6.746745 ATCATGCAAAAACCAAATTGATCC 57.253 33.333 0.00 0.00 0.00 3.36
1365 2133 8.706492 TCTATCATGCAAAAACCAAATTGATC 57.294 30.769 0.00 0.00 0.00 2.92
1374 2142 8.761575 TTTTCAGATTCTATCATGCAAAAACC 57.238 30.769 0.00 0.00 0.00 3.27
1400 2168 1.649321 TCAGATGGAGCTGGTCAGTT 58.351 50.000 9.30 0.00 36.55 3.16
1404 2172 2.777832 AACTTCAGATGGAGCTGGTC 57.222 50.000 0.00 0.00 36.55 4.02
1405 2173 3.515602 AAAACTTCAGATGGAGCTGGT 57.484 42.857 0.00 0.00 36.55 4.00
1406 2174 5.649395 TGATAAAAACTTCAGATGGAGCTGG 59.351 40.000 0.00 0.00 36.55 4.85
1407 2175 6.748333 TGATAAAAACTTCAGATGGAGCTG 57.252 37.500 0.00 0.00 37.24 4.24
1408 2176 6.259608 CGATGATAAAAACTTCAGATGGAGCT 59.740 38.462 0.00 0.00 0.00 4.09
1409 2177 6.425504 CGATGATAAAAACTTCAGATGGAGC 58.574 40.000 0.00 0.00 0.00 4.70
1412 2180 6.925610 TCCGATGATAAAAACTTCAGATGG 57.074 37.500 0.00 0.00 0.00 3.51
1414 2182 7.067372 TGCAATCCGATGATAAAAACTTCAGAT 59.933 33.333 0.00 0.00 0.00 2.90
1481 2340 1.804748 GAACCCGTTTCGCTGAAGAAT 59.195 47.619 0.00 0.00 0.00 2.40
1524 2383 0.526524 GGCTCCAGATCGACGAACAG 60.527 60.000 0.00 0.00 0.00 3.16
1595 2454 0.906282 TGTGGGAGATGAGCTGCTCA 60.906 55.000 32.07 32.07 44.99 4.26
1712 2571 7.506114 TCAGTTGACTTCTAAATAGTTGGTGT 58.494 34.615 0.00 0.00 0.00 4.16
1757 2616 5.089970 ACGATCAACATTCAAGATCCTCA 57.910 39.130 0.00 0.00 35.82 3.86
1760 2619 4.112634 TCGACGATCAACATTCAAGATCC 58.887 43.478 0.00 0.00 35.82 3.36
1765 2624 3.924073 ACGAATCGACGATCAACATTCAA 59.076 39.130 10.55 0.00 37.03 2.69
1766 2625 3.507786 ACGAATCGACGATCAACATTCA 58.492 40.909 10.55 0.00 37.03 2.57
1767 2626 3.546271 TGACGAATCGACGATCAACATTC 59.454 43.478 10.55 3.74 37.03 2.67
1768 2627 3.507786 TGACGAATCGACGATCAACATT 58.492 40.909 10.55 0.00 37.03 2.71
1769 2628 3.145212 TGACGAATCGACGATCAACAT 57.855 42.857 10.55 0.00 37.03 2.71
1770 2629 2.622546 TGACGAATCGACGATCAACA 57.377 45.000 10.55 6.81 37.03 3.33
1771 2630 3.364062 AGATGACGAATCGACGATCAAC 58.636 45.455 10.55 4.66 40.54 3.18
1772 2631 3.692791 AGATGACGAATCGACGATCAA 57.307 42.857 10.55 0.00 40.54 2.57
1773 2632 4.806342 TTAGATGACGAATCGACGATCA 57.194 40.909 10.55 6.06 40.54 2.92
1774 2633 5.383130 TCATTAGATGACGAATCGACGATC 58.617 41.667 10.55 9.16 40.54 3.69
1775 2634 5.358298 TCATTAGATGACGAATCGACGAT 57.642 39.130 10.55 4.05 40.54 3.73
1776 2635 4.806342 TCATTAGATGACGAATCGACGA 57.194 40.909 10.55 0.00 40.54 4.20
1777 2636 5.866503 TTTCATTAGATGACGAATCGACG 57.133 39.130 10.55 0.00 40.54 5.12
1778 2637 7.584123 CCAAATTTCATTAGATGACGAATCGAC 59.416 37.037 10.55 3.36 40.54 4.20
1779 2638 7.254761 CCCAAATTTCATTAGATGACGAATCGA 60.255 37.037 10.55 0.00 40.54 3.59
1780 2639 6.852853 CCCAAATTTCATTAGATGACGAATCG 59.147 38.462 0.00 0.00 40.54 3.34
1781 2640 7.707104 ACCCAAATTTCATTAGATGACGAATC 58.293 34.615 0.00 0.00 39.39 2.52
1782 2641 7.645058 ACCCAAATTTCATTAGATGACGAAT 57.355 32.000 0.00 0.00 39.39 3.34
1783 2642 7.827236 ACTACCCAAATTTCATTAGATGACGAA 59.173 33.333 0.00 0.00 39.39 3.85
1784 2643 7.335627 ACTACCCAAATTTCATTAGATGACGA 58.664 34.615 0.00 0.00 39.39 4.20
1785 2644 7.553881 ACTACCCAAATTTCATTAGATGACG 57.446 36.000 0.00 0.00 39.39 4.35
1786 2645 8.956426 TCAACTACCCAAATTTCATTAGATGAC 58.044 33.333 0.00 0.00 39.39 3.06
1787 2646 9.527157 TTCAACTACCCAAATTTCATTAGATGA 57.473 29.630 0.00 0.00 37.55 2.92
1788 2647 9.793252 CTTCAACTACCCAAATTTCATTAGATG 57.207 33.333 0.00 0.00 0.00 2.90
1789 2648 9.753674 TCTTCAACTACCCAAATTTCATTAGAT 57.246 29.630 0.00 0.00 0.00 1.98
1831 2690 7.994425 TGCTCATTTCCAAACATAAGTTAGA 57.006 32.000 0.00 0.00 36.84 2.10
1835 2694 6.449698 CAGTTGCTCATTTCCAAACATAAGT 58.550 36.000 0.00 0.00 0.00 2.24
1856 2715 4.589908 ACTGACAAAAAGAACTGACCAGT 58.410 39.130 0.00 0.00 44.94 4.00
1867 2726 5.783100 AATTGTGCACAACTGACAAAAAG 57.217 34.783 33.29 0.00 38.86 2.27
1892 4048 8.514330 TCTCAGCCGTATTAAAAATAACCAAT 57.486 30.769 0.00 0.00 0.00 3.16
1947 4107 8.871125 TGGACTCTTGACTAAAGTTCTTTATCT 58.129 33.333 5.63 0.00 37.18 1.98
1948 4108 9.660180 ATGGACTCTTGACTAAAGTTCTTTATC 57.340 33.333 5.63 6.63 37.18 1.75
1951 4111 9.442047 CATATGGACTCTTGACTAAAGTTCTTT 57.558 33.333 0.00 3.33 37.18 2.52
1953 4113 7.400339 TCCATATGGACTCTTGACTAAAGTTCT 59.600 37.037 20.98 0.00 39.78 3.01
1954 4114 7.556844 TCCATATGGACTCTTGACTAAAGTTC 58.443 38.462 20.98 0.00 39.78 3.01
1956 4116 7.496346 TTCCATATGGACTCTTGACTAAAGT 57.504 36.000 24.47 0.00 45.39 2.66
1957 4117 8.970859 AATTCCATATGGACTCTTGACTAAAG 57.029 34.615 24.47 0.00 45.39 1.85
1961 4121 6.051717 CGAAATTCCATATGGACTCTTGACT 58.948 40.000 24.47 0.00 45.39 3.41
1962 4122 6.049149 TCGAAATTCCATATGGACTCTTGAC 58.951 40.000 24.47 13.37 45.39 3.18
2047 4208 7.997104 GCAATTCGTGAATTCTACTCGTATTAC 59.003 37.037 7.05 4.19 38.84 1.89
2048 4209 7.703197 TGCAATTCGTGAATTCTACTCGTATTA 59.297 33.333 7.05 0.00 38.84 0.98
2049 4210 6.533723 TGCAATTCGTGAATTCTACTCGTATT 59.466 34.615 7.05 8.77 38.84 1.89
2050 4211 6.040247 TGCAATTCGTGAATTCTACTCGTAT 58.960 36.000 7.05 3.76 38.84 3.06
2051 4212 5.404096 TGCAATTCGTGAATTCTACTCGTA 58.596 37.500 7.05 1.70 38.84 3.43
2052 4213 4.242475 TGCAATTCGTGAATTCTACTCGT 58.758 39.130 7.05 0.00 38.84 4.18
2054 4215 5.024555 GCTTGCAATTCGTGAATTCTACTC 58.975 41.667 7.05 0.00 38.84 2.59
2056 4217 4.722194 TGCTTGCAATTCGTGAATTCTAC 58.278 39.130 7.05 2.78 38.84 2.59
2058 4219 3.921119 TGCTTGCAATTCGTGAATTCT 57.079 38.095 7.05 0.00 38.84 2.40
2059 4220 3.735240 TGTTGCTTGCAATTCGTGAATTC 59.265 39.130 11.32 0.00 38.84 2.17
2136 4949 6.354130 TCTATTCCTTGTATGGGCACTAAAC 58.646 40.000 0.00 0.00 0.00 2.01
2145 4958 5.373812 AGGGTGTTCTATTCCTTGTATGG 57.626 43.478 0.00 0.00 0.00 2.74
2152 4965 4.790790 AGGATGAAAGGGTGTTCTATTCCT 59.209 41.667 0.00 0.00 32.25 3.36
2210 5023 7.439955 TCAGCTGTCAGAAACGACTTATAAAAA 59.560 33.333 14.67 0.00 36.82 1.94
2211 5024 6.926826 TCAGCTGTCAGAAACGACTTATAAAA 59.073 34.615 14.67 0.00 36.82 1.52
2212 5025 6.452242 TCAGCTGTCAGAAACGACTTATAAA 58.548 36.000 14.67 0.00 36.82 1.40
2213 5026 6.020971 TCAGCTGTCAGAAACGACTTATAA 57.979 37.500 14.67 0.00 36.82 0.98
2214 5027 5.638596 TCAGCTGTCAGAAACGACTTATA 57.361 39.130 14.67 0.00 36.82 0.98
2215 5028 4.521130 TCAGCTGTCAGAAACGACTTAT 57.479 40.909 14.67 0.00 36.82 1.73
2216 5029 4.316205 TTCAGCTGTCAGAAACGACTTA 57.684 40.909 14.67 0.00 36.82 2.24
2217 5030 2.890808 TCAGCTGTCAGAAACGACTT 57.109 45.000 14.67 0.00 36.82 3.01
2218 5031 2.890808 TTCAGCTGTCAGAAACGACT 57.109 45.000 14.67 0.00 36.82 4.18
2219 5032 4.024893 TCAATTTCAGCTGTCAGAAACGAC 60.025 41.667 14.67 0.00 36.65 4.34
2220 5033 4.126437 TCAATTTCAGCTGTCAGAAACGA 58.874 39.130 14.67 4.79 36.65 3.85
2221 5034 4.461405 CTCAATTTCAGCTGTCAGAAACG 58.539 43.478 14.67 2.54 36.65 3.60
2222 5035 4.023365 AGCTCAATTTCAGCTGTCAGAAAC 60.023 41.667 14.67 0.00 45.85 2.78
2223 5036 4.139786 AGCTCAATTTCAGCTGTCAGAAA 58.860 39.130 14.67 7.20 45.85 2.52
2224 5037 3.748083 AGCTCAATTTCAGCTGTCAGAA 58.252 40.909 14.67 5.41 45.85 3.02
2225 5038 3.413846 AGCTCAATTTCAGCTGTCAGA 57.586 42.857 14.67 5.39 45.85 3.27
2232 5045 2.473984 GTGCAAACAGCTCAATTTCAGC 59.526 45.455 0.00 0.00 45.94 4.26
2233 5046 2.722629 CGTGCAAACAGCTCAATTTCAG 59.277 45.455 0.00 0.00 45.94 3.02
2234 5047 2.730069 CGTGCAAACAGCTCAATTTCA 58.270 42.857 0.00 0.00 45.94 2.69
2235 5048 1.453148 GCGTGCAAACAGCTCAATTTC 59.547 47.619 0.00 0.00 45.94 2.17
2236 5049 1.067516 AGCGTGCAAACAGCTCAATTT 59.932 42.857 0.00 0.00 45.94 1.82
2237 5050 0.670162 AGCGTGCAAACAGCTCAATT 59.330 45.000 0.00 0.00 45.94 2.32
2238 5051 0.039798 CAGCGTGCAAACAGCTCAAT 60.040 50.000 4.55 0.00 45.94 2.57
2239 5052 1.356270 CAGCGTGCAAACAGCTCAA 59.644 52.632 4.55 0.00 45.94 3.02
2240 5053 1.775039 GACAGCGTGCAAACAGCTCA 61.775 55.000 4.55 0.00 45.94 4.26
2241 5054 1.082496 GACAGCGTGCAAACAGCTC 60.082 57.895 4.55 0.00 45.94 4.09
2242 5055 1.524621 AGACAGCGTGCAAACAGCT 60.525 52.632 0.00 0.00 45.94 4.24
2243 5056 1.369689 CAGACAGCGTGCAAACAGC 60.370 57.895 0.00 0.00 45.96 4.40
2244 5057 0.657312 TTCAGACAGCGTGCAAACAG 59.343 50.000 0.00 0.00 0.00 3.16
2245 5058 1.090728 TTTCAGACAGCGTGCAAACA 58.909 45.000 0.00 0.00 0.00 2.83
2246 5059 2.046313 CATTTCAGACAGCGTGCAAAC 58.954 47.619 0.00 0.00 0.00 2.93
2247 5060 1.675483 ACATTTCAGACAGCGTGCAAA 59.325 42.857 0.00 0.00 0.00 3.68
2248 5061 1.264020 GACATTTCAGACAGCGTGCAA 59.736 47.619 0.00 0.00 0.00 4.08
2249 5062 0.867746 GACATTTCAGACAGCGTGCA 59.132 50.000 0.00 0.00 0.00 4.57
2250 5063 1.151668 AGACATTTCAGACAGCGTGC 58.848 50.000 0.00 0.00 0.00 5.34
2251 5064 3.317150 TGTAGACATTTCAGACAGCGTG 58.683 45.455 0.00 0.00 0.00 5.34
2252 5065 3.660501 TGTAGACATTTCAGACAGCGT 57.339 42.857 0.00 0.00 0.00 5.07
2253 5066 3.369147 CCTTGTAGACATTTCAGACAGCG 59.631 47.826 0.00 0.00 0.00 5.18
2254 5067 4.319177 ACCTTGTAGACATTTCAGACAGC 58.681 43.478 0.00 0.00 0.00 4.40
2255 5068 4.623167 CGACCTTGTAGACATTTCAGACAG 59.377 45.833 0.00 0.00 0.00 3.51
2256 5069 4.279922 TCGACCTTGTAGACATTTCAGACA 59.720 41.667 0.00 0.00 0.00 3.41
2257 5070 4.806330 TCGACCTTGTAGACATTTCAGAC 58.194 43.478 0.00 0.00 0.00 3.51
2258 5071 4.523173 ACTCGACCTTGTAGACATTTCAGA 59.477 41.667 0.00 0.00 0.00 3.27
2259 5072 4.810790 ACTCGACCTTGTAGACATTTCAG 58.189 43.478 0.00 0.00 0.00 3.02
2260 5073 4.866508 ACTCGACCTTGTAGACATTTCA 57.133 40.909 0.00 0.00 0.00 2.69
2261 5074 5.952033 AGTACTCGACCTTGTAGACATTTC 58.048 41.667 0.00 0.00 0.00 2.17
2262 5075 5.979288 AGTACTCGACCTTGTAGACATTT 57.021 39.130 0.00 0.00 0.00 2.32
2263 5076 7.458409 TTTAGTACTCGACCTTGTAGACATT 57.542 36.000 0.00 0.00 0.00 2.71
2264 5077 7.458409 TTTTAGTACTCGACCTTGTAGACAT 57.542 36.000 0.00 0.00 0.00 3.06
2265 5078 6.882610 TTTTAGTACTCGACCTTGTAGACA 57.117 37.500 0.00 0.00 0.00 3.41
2266 5079 7.811713 ACAATTTTAGTACTCGACCTTGTAGAC 59.188 37.037 0.00 0.00 0.00 2.59
2267 5080 7.889469 ACAATTTTAGTACTCGACCTTGTAGA 58.111 34.615 0.00 0.00 0.00 2.59
2268 5081 7.811236 TGACAATTTTAGTACTCGACCTTGTAG 59.189 37.037 0.00 0.00 0.00 2.74
2269 5082 7.660112 TGACAATTTTAGTACTCGACCTTGTA 58.340 34.615 0.00 0.00 0.00 2.41
2270 5083 6.518493 TGACAATTTTAGTACTCGACCTTGT 58.482 36.000 0.00 4.64 0.00 3.16
2271 5084 7.456253 CATGACAATTTTAGTACTCGACCTTG 58.544 38.462 0.00 1.31 0.00 3.61
2272 5085 6.092259 GCATGACAATTTTAGTACTCGACCTT 59.908 38.462 0.00 0.00 0.00 3.50
2273 5086 5.581085 GCATGACAATTTTAGTACTCGACCT 59.419 40.000 0.00 0.00 0.00 3.85
2274 5087 5.581085 AGCATGACAATTTTAGTACTCGACC 59.419 40.000 0.00 0.00 0.00 4.79
2275 5088 6.648725 AGCATGACAATTTTAGTACTCGAC 57.351 37.500 0.00 0.00 0.00 4.20
2276 5089 6.092122 CCAAGCATGACAATTTTAGTACTCGA 59.908 38.462 0.00 0.00 0.00 4.04
2277 5090 6.250819 CCAAGCATGACAATTTTAGTACTCG 58.749 40.000 0.00 0.00 0.00 4.18
2278 5091 6.374333 TCCCAAGCATGACAATTTTAGTACTC 59.626 38.462 0.00 0.00 0.00 2.59
2279 5092 6.245408 TCCCAAGCATGACAATTTTAGTACT 58.755 36.000 0.00 0.00 0.00 2.73
2280 5093 6.509418 TCCCAAGCATGACAATTTTAGTAC 57.491 37.500 0.00 0.00 0.00 2.73
2316 5129 8.877195 ACAGAAAGGAGTATTTGTTAGTAGGAA 58.123 33.333 0.00 0.00 0.00 3.36
2341 5155 3.366374 GCAGCATCAGAAACAGGGTTTAC 60.366 47.826 0.00 0.00 0.00 2.01
2466 5280 0.671781 CAAGTCCTGAGCCAGTTCCG 60.672 60.000 2.18 0.00 0.00 4.30
2629 5446 5.978934 AGCTGAAACTTGCTCAAATTTTG 57.021 34.783 2.59 2.59 33.90 2.44
2662 5857 3.457610 AAACAGGCAATGGTTTCAGTG 57.542 42.857 0.00 0.00 34.12 3.66
3054 6384 2.872557 CACTTGGCCATGACGCTG 59.127 61.111 24.48 8.89 0.00 5.18
3129 6459 1.003718 GGAGTTGACGTCCTTGGGG 60.004 63.158 14.12 0.00 0.00 4.96
3201 6531 2.674796 AACTCGAGAAGGGATTTCGG 57.325 50.000 21.68 0.00 40.86 4.30
3203 6533 4.185394 GGAGAAACTCGAGAAGGGATTTC 58.815 47.826 21.68 16.49 35.97 2.17
3204 6534 3.583086 TGGAGAAACTCGAGAAGGGATTT 59.417 43.478 21.68 7.85 0.00 2.17
3205 6535 3.173965 TGGAGAAACTCGAGAAGGGATT 58.826 45.455 21.68 0.00 0.00 3.01
3207 6537 2.304221 TGGAGAAACTCGAGAAGGGA 57.696 50.000 21.68 0.00 0.00 4.20
3208 6538 3.265791 CAATGGAGAAACTCGAGAAGGG 58.734 50.000 21.68 0.00 0.00 3.95
3209 6539 3.931578 ACAATGGAGAAACTCGAGAAGG 58.068 45.455 21.68 0.00 0.00 3.46
3211 6541 6.590292 GTGATAACAATGGAGAAACTCGAGAA 59.410 38.462 21.68 0.00 0.00 2.87
3212 6542 6.100004 GTGATAACAATGGAGAAACTCGAGA 58.900 40.000 21.68 0.00 0.00 4.04
3213 6543 5.292101 GGTGATAACAATGGAGAAACTCGAG 59.708 44.000 11.84 11.84 0.00 4.04
3215 6545 5.063944 CAGGTGATAACAATGGAGAAACTCG 59.936 44.000 0.00 0.00 0.00 4.18
3216 6546 6.092807 GTCAGGTGATAACAATGGAGAAACTC 59.907 42.308 0.00 0.00 0.00 3.01
3224 6554 5.882000 TCTCAATGTCAGGTGATAACAATGG 59.118 40.000 0.00 0.00 0.00 3.16
3226 6556 6.715280 AGTCTCAATGTCAGGTGATAACAAT 58.285 36.000 0.00 0.00 0.00 2.71
3249 6579 3.750652 GCAAGGAAGAAGGAGAAACAGAG 59.249 47.826 0.00 0.00 0.00 3.35
3255 6585 2.494059 CAACGCAAGGAAGAAGGAGAA 58.506 47.619 0.00 0.00 46.39 2.87
3258 6588 0.108585 AGCAACGCAAGGAAGAAGGA 59.891 50.000 0.00 0.00 46.39 3.36
3263 6593 1.081641 CAGCAGCAACGCAAGGAAG 60.082 57.895 0.00 0.00 46.39 3.46
3377 6796 2.110967 GCTGATCATGCACACCGCT 61.111 57.895 10.95 0.00 43.06 5.52
3548 6967 0.178533 CTCCGACCTCCTCGTAGTCT 59.821 60.000 0.00 0.00 41.18 3.24
3623 7042 9.645059 CTCCGTTCATTATTATGATGTATCACT 57.355 33.333 0.00 0.00 40.37 3.41
3647 7305 5.652744 TTTCTCGCAGTACAAAAACTCTC 57.347 39.130 0.00 0.00 0.00 3.20
3664 7322 4.943705 TGAAGTCATACCCTGCAATTTCTC 59.056 41.667 0.00 0.00 0.00 2.87
3667 7325 6.014327 ACAAATGAAGTCATACCCTGCAATTT 60.014 34.615 0.00 0.00 35.10 1.82
3668 7326 5.481473 ACAAATGAAGTCATACCCTGCAATT 59.519 36.000 0.00 0.00 35.10 2.32
3670 7328 4.406456 ACAAATGAAGTCATACCCTGCAA 58.594 39.130 0.00 0.00 35.10 4.08
3671 7329 4.032960 ACAAATGAAGTCATACCCTGCA 57.967 40.909 0.00 0.00 35.10 4.41
3673 7331 9.357652 CAATAAAACAAATGAAGTCATACCCTG 57.642 33.333 0.00 0.00 35.10 4.45
3674 7332 9.088987 ACAATAAAACAAATGAAGTCATACCCT 57.911 29.630 0.00 0.00 35.10 4.34
3687 7345 7.983307 TGCTTTGCTTTCACAATAAAACAAAT 58.017 26.923 0.00 0.00 0.00 2.32
3696 7354 5.105997 GGACTAGATGCTTTGCTTTCACAAT 60.106 40.000 0.00 0.00 0.00 2.71
3699 7357 3.753272 TGGACTAGATGCTTTGCTTTCAC 59.247 43.478 0.00 0.00 0.00 3.18
3714 7372 8.539770 AATAAAATCTGCATCGTATGGACTAG 57.460 34.615 0.00 0.00 0.00 2.57
3718 7404 8.902540 ACTTAATAAAATCTGCATCGTATGGA 57.097 30.769 0.00 0.00 0.00 3.41
3731 7417 6.848451 TGCTTCGTTGGGACTTAATAAAATC 58.152 36.000 0.00 0.00 0.00 2.17
3741 7427 4.764823 TGAAATAAATGCTTCGTTGGGACT 59.235 37.500 0.00 0.00 0.00 3.85
3746 7432 6.373779 AGTGACTGAAATAAATGCTTCGTTG 58.626 36.000 0.00 0.00 0.00 4.10
3773 7459 5.812652 CAAGGTAGCTCGTTGTTTAAAACA 58.187 37.500 0.00 0.00 40.21 2.83
3889 8592 6.042638 AGCTTCTCTGCTACAATGAGTAAA 57.957 37.500 0.00 0.00 42.10 2.01
3890 8593 5.667539 AGCTTCTCTGCTACAATGAGTAA 57.332 39.130 0.00 0.00 42.10 2.24
3891 8594 6.775594 TTAGCTTCTCTGCTACAATGAGTA 57.224 37.500 0.00 0.00 44.15 2.59
3892 8595 5.667539 TTAGCTTCTCTGCTACAATGAGT 57.332 39.130 0.00 0.00 44.15 3.41
3893 8596 7.331440 CCATATTAGCTTCTCTGCTACAATGAG 59.669 40.741 13.96 0.00 44.15 2.90
3894 8597 7.157347 CCATATTAGCTTCTCTGCTACAATGA 58.843 38.462 13.96 0.00 44.15 2.57
3895 8598 6.933521 ACCATATTAGCTTCTCTGCTACAATG 59.066 38.462 0.00 0.00 44.15 2.82
3896 8599 7.072263 ACCATATTAGCTTCTCTGCTACAAT 57.928 36.000 0.00 0.00 44.15 2.71
3897 8600 6.485830 ACCATATTAGCTTCTCTGCTACAA 57.514 37.500 0.00 0.00 44.15 2.41
3898 8601 6.294787 GCTACCATATTAGCTTCTCTGCTACA 60.295 42.308 0.00 0.00 44.15 2.74
3899 8602 6.096695 GCTACCATATTAGCTTCTCTGCTAC 58.903 44.000 0.00 0.00 44.15 3.58
3900 8603 5.106118 CGCTACCATATTAGCTTCTCTGCTA 60.106 44.000 0.00 0.00 42.12 3.49
3901 8604 4.321601 CGCTACCATATTAGCTTCTCTGCT 60.322 45.833 0.00 0.00 42.12 4.24
3902 8605 3.923461 CGCTACCATATTAGCTTCTCTGC 59.077 47.826 0.00 0.00 42.12 4.26
3903 8606 4.218635 TCCGCTACCATATTAGCTTCTCTG 59.781 45.833 0.00 0.00 42.12 3.35
3904 8607 4.408276 TCCGCTACCATATTAGCTTCTCT 58.592 43.478 0.00 0.00 42.12 3.10
3905 8608 4.785511 TCCGCTACCATATTAGCTTCTC 57.214 45.455 0.00 0.00 42.12 2.87
3906 8609 4.772624 TCATCCGCTACCATATTAGCTTCT 59.227 41.667 0.00 0.00 42.12 2.85
3907 8610 4.865365 GTCATCCGCTACCATATTAGCTTC 59.135 45.833 0.00 0.00 42.12 3.86
3908 8611 4.528596 AGTCATCCGCTACCATATTAGCTT 59.471 41.667 0.00 0.00 42.12 3.74
3909 8612 4.090090 AGTCATCCGCTACCATATTAGCT 58.910 43.478 5.18 0.00 42.12 3.32
3910 8613 4.457834 AGTCATCCGCTACCATATTAGC 57.542 45.455 0.00 0.00 41.06 3.09
3911 8614 6.037098 GCTAAGTCATCCGCTACCATATTAG 58.963 44.000 0.00 0.00 0.00 1.73
3912 8615 5.479027 TGCTAAGTCATCCGCTACCATATTA 59.521 40.000 0.00 0.00 0.00 0.98
3913 8616 4.283467 TGCTAAGTCATCCGCTACCATATT 59.717 41.667 0.00 0.00 0.00 1.28
3914 8617 3.832490 TGCTAAGTCATCCGCTACCATAT 59.168 43.478 0.00 0.00 0.00 1.78
3915 8618 3.227614 TGCTAAGTCATCCGCTACCATA 58.772 45.455 0.00 0.00 0.00 2.74
3916 8619 2.039418 TGCTAAGTCATCCGCTACCAT 58.961 47.619 0.00 0.00 0.00 3.55
3917 8620 1.480789 TGCTAAGTCATCCGCTACCA 58.519 50.000 0.00 0.00 0.00 3.25
3918 8621 2.596904 TTGCTAAGTCATCCGCTACC 57.403 50.000 0.00 0.00 0.00 3.18
3919 8622 2.285488 GCTTTGCTAAGTCATCCGCTAC 59.715 50.000 9.64 0.00 33.74 3.58
3920 8623 2.093711 TGCTTTGCTAAGTCATCCGCTA 60.094 45.455 9.64 0.00 33.74 4.26
3921 8624 1.339055 TGCTTTGCTAAGTCATCCGCT 60.339 47.619 9.64 0.00 33.74 5.52
3922 8625 1.086696 TGCTTTGCTAAGTCATCCGC 58.913 50.000 9.64 0.00 33.74 5.54
3923 8626 4.122776 ACTATGCTTTGCTAAGTCATCCG 58.877 43.478 16.29 12.75 33.35 4.18
3924 8627 6.442513 AAACTATGCTTTGCTAAGTCATCC 57.557 37.500 16.29 0.02 33.35 3.51
3925 8628 8.669243 ACTAAAACTATGCTTTGCTAAGTCATC 58.331 33.333 16.29 0.33 33.35 2.92
3926 8629 8.567285 ACTAAAACTATGCTTTGCTAAGTCAT 57.433 30.769 16.75 16.75 34.62 3.06
3927 8630 7.878127 AGACTAAAACTATGCTTTGCTAAGTCA 59.122 33.333 9.64 8.30 32.80 3.41
3928 8631 8.257830 AGACTAAAACTATGCTTTGCTAAGTC 57.742 34.615 9.64 3.09 33.74 3.01
3929 8632 8.622948 AAGACTAAAACTATGCTTTGCTAAGT 57.377 30.769 9.64 0.00 33.74 2.24
3931 8634 8.665685 GCTAAGACTAAAACTATGCTTTGCTAA 58.334 33.333 0.00 0.00 33.52 3.09
3932 8635 7.822334 TGCTAAGACTAAAACTATGCTTTGCTA 59.178 33.333 0.00 0.00 35.93 3.49
3933 8636 6.655003 TGCTAAGACTAAAACTATGCTTTGCT 59.345 34.615 0.00 0.00 35.93 3.91
3934 8637 6.842163 TGCTAAGACTAAAACTATGCTTTGC 58.158 36.000 0.00 0.00 35.64 3.68
3935 8638 8.507249 ACTTGCTAAGACTAAAACTATGCTTTG 58.493 33.333 3.37 0.00 0.00 2.77
3936 8639 8.622948 ACTTGCTAAGACTAAAACTATGCTTT 57.377 30.769 3.37 0.00 0.00 3.51
3937 8640 8.097662 AGACTTGCTAAGACTAAAACTATGCTT 58.902 33.333 3.37 0.00 31.86 3.91
3938 8641 7.616313 AGACTTGCTAAGACTAAAACTATGCT 58.384 34.615 3.37 0.00 31.86 3.79
3939 8642 7.835634 AGACTTGCTAAGACTAAAACTATGC 57.164 36.000 3.37 0.00 31.86 3.14
3959 8662 2.809299 GCGTCCCACCAAGTTTTAGACT 60.809 50.000 0.00 0.00 41.47 3.24
3960 8663 1.534163 GCGTCCCACCAAGTTTTAGAC 59.466 52.381 0.00 0.00 0.00 2.59
3961 8664 1.418637 AGCGTCCCACCAAGTTTTAGA 59.581 47.619 0.00 0.00 0.00 2.10
3962 8665 1.535462 CAGCGTCCCACCAAGTTTTAG 59.465 52.381 0.00 0.00 0.00 1.85
3963 8666 1.134037 ACAGCGTCCCACCAAGTTTTA 60.134 47.619 0.00 0.00 0.00 1.52
3964 8667 0.395173 ACAGCGTCCCACCAAGTTTT 60.395 50.000 0.00 0.00 0.00 2.43
3965 8668 0.818040 GACAGCGTCCCACCAAGTTT 60.818 55.000 0.00 0.00 0.00 2.66
3966 8669 1.227853 GACAGCGTCCCACCAAGTT 60.228 57.895 0.00 0.00 0.00 2.66
3967 8670 2.426023 GACAGCGTCCCACCAAGT 59.574 61.111 0.00 0.00 0.00 3.16
3968 8671 2.358737 GGACAGCGTCCCACCAAG 60.359 66.667 14.46 0.00 46.19 3.61
3976 8679 0.175073 ATAAAGTCCGGGACAGCGTC 59.825 55.000 27.87 0.67 34.60 5.19
3977 8680 0.611714 AATAAAGTCCGGGACAGCGT 59.388 50.000 27.87 12.51 34.60 5.07
3978 8681 1.134788 AGAATAAAGTCCGGGACAGCG 60.135 52.381 27.87 0.00 34.60 5.18
3979 8682 2.280628 CAGAATAAAGTCCGGGACAGC 58.719 52.381 27.87 10.58 34.60 4.40
3980 8683 2.280628 GCAGAATAAAGTCCGGGACAG 58.719 52.381 27.87 8.74 34.60 3.51
3981 8684 1.626321 TGCAGAATAAAGTCCGGGACA 59.374 47.619 27.87 9.04 34.60 4.02
3982 8685 2.396590 TGCAGAATAAAGTCCGGGAC 57.603 50.000 19.61 19.61 0.00 4.46
3983 8686 3.199946 AGAATGCAGAATAAAGTCCGGGA 59.800 43.478 0.00 0.00 0.00 5.14
3984 8687 3.545703 AGAATGCAGAATAAAGTCCGGG 58.454 45.455 0.00 0.00 0.00 5.73
3985 8688 6.260936 ACATAAGAATGCAGAATAAAGTCCGG 59.739 38.462 0.00 0.00 36.50 5.14
3986 8689 7.251704 ACATAAGAATGCAGAATAAAGTCCG 57.748 36.000 0.00 0.00 36.50 4.79
3996 8699 8.347771 GCAAGATCATTTACATAAGAATGCAGA 58.652 33.333 0.00 0.00 36.50 4.26
3997 8700 8.350722 AGCAAGATCATTTACATAAGAATGCAG 58.649 33.333 0.00 0.00 36.50 4.41
3998 8701 8.229253 AGCAAGATCATTTACATAAGAATGCA 57.771 30.769 0.00 0.00 36.50 3.96
3999 8702 8.566260 AGAGCAAGATCATTTACATAAGAATGC 58.434 33.333 0.00 0.00 36.50 3.56
4053 8756 8.203485 TGCTTTGTGACTTTGGATCTTATTTTT 58.797 29.630 0.00 0.00 0.00 1.94
4054 8757 7.725251 TGCTTTGTGACTTTGGATCTTATTTT 58.275 30.769 0.00 0.00 0.00 1.82
4055 8758 7.288810 TGCTTTGTGACTTTGGATCTTATTT 57.711 32.000 0.00 0.00 0.00 1.40
4056 8759 6.899393 TGCTTTGTGACTTTGGATCTTATT 57.101 33.333 0.00 0.00 0.00 1.40
4057 8760 6.491403 AGTTGCTTTGTGACTTTGGATCTTAT 59.509 34.615 0.00 0.00 0.00 1.73
4058 8761 5.827797 AGTTGCTTTGTGACTTTGGATCTTA 59.172 36.000 0.00 0.00 0.00 2.10
4059 8762 4.646492 AGTTGCTTTGTGACTTTGGATCTT 59.354 37.500 0.00 0.00 0.00 2.40
4060 8763 4.210331 AGTTGCTTTGTGACTTTGGATCT 58.790 39.130 0.00 0.00 0.00 2.75
4061 8764 4.574599 AGTTGCTTTGTGACTTTGGATC 57.425 40.909 0.00 0.00 0.00 3.36
4062 8765 5.010012 CCTTAGTTGCTTTGTGACTTTGGAT 59.990 40.000 0.00 0.00 0.00 3.41
4063 8766 4.338118 CCTTAGTTGCTTTGTGACTTTGGA 59.662 41.667 0.00 0.00 0.00 3.53
4064 8767 4.610945 CCTTAGTTGCTTTGTGACTTTGG 58.389 43.478 0.00 0.00 0.00 3.28
4065 8768 4.044426 GCCTTAGTTGCTTTGTGACTTTG 58.956 43.478 0.00 0.00 0.00 2.77
4066 8769 3.243068 CGCCTTAGTTGCTTTGTGACTTT 60.243 43.478 0.00 0.00 0.00 2.66
4067 8770 2.290641 CGCCTTAGTTGCTTTGTGACTT 59.709 45.455 0.00 0.00 0.00 3.01
4068 8771 1.873591 CGCCTTAGTTGCTTTGTGACT 59.126 47.619 0.00 0.00 0.00 3.41
4069 8772 1.871039 TCGCCTTAGTTGCTTTGTGAC 59.129 47.619 0.00 0.00 0.00 3.67
4070 8773 1.871039 GTCGCCTTAGTTGCTTTGTGA 59.129 47.619 0.00 0.00 0.00 3.58
4071 8774 1.069227 GGTCGCCTTAGTTGCTTTGTG 60.069 52.381 0.00 0.00 0.00 3.33
4072 8775 1.235724 GGTCGCCTTAGTTGCTTTGT 58.764 50.000 0.00 0.00 0.00 2.83
4089 8792 1.272203 TGATTATGTTGTTGCCCCGGT 60.272 47.619 0.00 0.00 0.00 5.28
4091 8794 2.799207 GCATGATTATGTTGTTGCCCCG 60.799 50.000 0.00 0.00 36.65 5.73
4148 8851 2.125147 GCTGCATGCCACTCGGTA 60.125 61.111 16.68 0.00 35.15 4.02
4173 8877 3.002102 GTCGTCTCTCCTCTTCGTAGTT 58.998 50.000 0.00 0.00 0.00 2.24
4178 8882 0.095589 CACGTCGTCTCTCCTCTTCG 59.904 60.000 0.00 0.00 0.00 3.79
4205 8909 1.372582 TCATGTTGGATGCGCTTCTC 58.627 50.000 21.05 12.59 0.00 2.87
4253 8995 6.273071 TCCTTTTGCTTTAGTTTCTTTGCTC 58.727 36.000 0.00 0.00 0.00 4.26
4359 9101 2.498807 TCTGATCGCATTTCCTCTCG 57.501 50.000 0.00 0.00 0.00 4.04
4393 9135 7.969536 AATCTTTGAGTTCTCGAAATCTTCA 57.030 32.000 8.34 0.00 36.47 3.02
4400 9142 6.873605 TGAAGCATAATCTTTGAGTTCTCGAA 59.126 34.615 2.98 2.98 0.00 3.71
4405 9147 7.094634 TGAGGTTGAAGCATAATCTTTGAGTTC 60.095 37.037 0.00 0.00 0.00 3.01
4406 9148 6.716628 TGAGGTTGAAGCATAATCTTTGAGTT 59.283 34.615 0.00 0.00 0.00 3.01
4407 9149 6.240894 TGAGGTTGAAGCATAATCTTTGAGT 58.759 36.000 0.00 0.00 0.00 3.41
4408 9150 6.748333 TGAGGTTGAAGCATAATCTTTGAG 57.252 37.500 0.00 0.00 0.00 3.02
4409 9151 6.885918 TGATGAGGTTGAAGCATAATCTTTGA 59.114 34.615 0.00 0.00 0.00 2.69
4410 9152 6.971184 GTGATGAGGTTGAAGCATAATCTTTG 59.029 38.462 0.00 0.00 0.00 2.77
4411 9153 6.660521 TGTGATGAGGTTGAAGCATAATCTTT 59.339 34.615 0.00 0.00 0.00 2.52
4441 9188 7.044181 TCAAGATGGTGATTCAAGATGTCTAC 58.956 38.462 0.00 0.00 0.00 2.59
4478 9237 1.398595 GCATTGAAGTGCGTGTGAAC 58.601 50.000 0.00 0.00 35.10 3.18
4479 9238 3.843632 GCATTGAAGTGCGTGTGAA 57.156 47.368 0.00 0.00 35.10 3.18
4545 9304 7.495901 TGGAACTGTAATTTTCAGATTTTGCA 58.504 30.769 9.68 3.35 36.81 4.08
4551 9310 7.405292 TGATCCTGGAACTGTAATTTTCAGAT 58.595 34.615 9.68 0.00 36.81 2.90
4556 9315 7.123247 CCTTGATGATCCTGGAACTGTAATTTT 59.877 37.037 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.