Multiple sequence alignment - TraesCS4A01G065300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G065300 chr4A 100.000 3570 0 0 1 3570 62536927 62540496 0.000000e+00 6593.0
1 TraesCS4A01G065300 chr4D 92.331 1343 47 24 1774 3089 405028862 405030175 0.000000e+00 1858.0
2 TraesCS4A01G065300 chr4D 89.645 1323 69 35 449 1738 405027449 405028736 0.000000e+00 1622.0
3 TraesCS4A01G065300 chr4D 89.760 459 30 6 1 448 405026966 405027418 4.000000e-159 571.0
4 TraesCS4A01G065300 chr4D 79.106 761 121 30 1810 2557 443207203 443207938 1.150000e-134 490.0
5 TraesCS4A01G065300 chr4D 76.407 462 94 12 1270 1719 443206730 443207188 5.960000e-58 235.0
6 TraesCS4A01G065300 chr4B 90.850 1377 67 35 1740 3089 502962091 502963435 0.000000e+00 1790.0
7 TraesCS4A01G065300 chr4B 91.331 1292 63 22 449 1724 502960748 502962006 0.000000e+00 1720.0
8 TraesCS4A01G065300 chr4B 87.025 447 36 11 1 434 502955811 502956248 5.360000e-133 484.0
9 TraesCS4A01G065300 chr1B 82.714 700 105 14 1794 2485 664777382 664778073 3.050000e-170 608.0
10 TraesCS4A01G065300 chr1B 81.267 726 110 23 1830 2542 659724467 659725179 6.690000e-157 564.0
11 TraesCS4A01G065300 chr1B 98.986 296 3 0 3267 3562 616319430 616319135 6.790000e-147 531.0
12 TraesCS4A01G065300 chr1B 78.804 769 132 23 1808 2565 645142081 645141333 4.140000e-134 488.0
13 TraesCS4A01G065300 chr1B 75.143 700 140 32 1037 1719 659723753 659724435 7.490000e-77 298.0
14 TraesCS4A01G065300 chr1B 82.222 90 8 7 3086 3167 497304491 497304580 1.780000e-08 71.3
15 TraesCS4A01G065300 chr1B 80.000 95 10 5 3086 3172 555200241 555200148 1.070000e-05 62.1
16 TraesCS4A01G065300 chr1D 81.405 726 109 23 1830 2542 474375882 474376594 1.440000e-158 569.0
17 TraesCS4A01G065300 chr1D 81.545 699 115 12 1794 2485 477189766 477190457 6.690000e-157 564.0
18 TraesCS4A01G065300 chr1D 75.753 697 141 28 1037 1719 474375168 474375850 3.440000e-85 326.0
19 TraesCS4A01G065300 chr1D 78.338 337 57 13 1391 1719 467438913 467438585 1.680000e-48 204.0
20 TraesCS4A01G065300 chr1A 83.333 618 91 10 1874 2485 573243238 573243849 8.660000e-156 560.0
21 TraesCS4A01G065300 chr1A 81.938 681 99 21 1874 2542 568729413 568728745 4.030000e-154 555.0
22 TraesCS4A01G065300 chr1A 78.443 334 62 9 1391 1719 559707696 559707368 3.610000e-50 209.0
23 TraesCS4A01G065300 chr6B 95.623 297 13 0 3267 3563 479296278 479296574 8.970000e-131 477.0
24 TraesCS4A01G065300 chr6B 95.623 297 13 0 3267 3563 538067742 538068038 8.970000e-131 477.0
25 TraesCS4A01G065300 chr6B 78.679 333 63 8 1391 1719 573414710 573414382 7.760000e-52 215.0
26 TraesCS4A01G065300 chrUn 95.302 298 14 0 3266 3563 78173365 78173662 1.160000e-129 473.0
27 TraesCS4A01G065300 chr7B 95.302 298 14 0 3266 3563 127530067 127529770 1.160000e-129 473.0
28 TraesCS4A01G065300 chr7B 71.388 706 167 29 1033 1719 470836965 470836276 6.170000e-33 152.0
29 TraesCS4A01G065300 chr2B 95.302 298 14 0 3266 3563 555725241 555725538 1.160000e-129 473.0
30 TraesCS4A01G065300 chr2B 95.302 298 14 0 3266 3563 603169187 603169484 1.160000e-129 473.0
31 TraesCS4A01G065300 chr2B 95.349 43 2 0 3086 3128 277596345 277596387 6.400000e-08 69.4
32 TraesCS4A01G065300 chr3B 94.719 303 15 1 3267 3568 651374082 651373780 1.500000e-128 470.0
33 TraesCS4A01G065300 chr3B 93.375 317 19 2 3252 3567 657541648 657541963 5.400000e-128 468.0
34 TraesCS4A01G065300 chr6A 79.518 332 62 6 1391 1719 525030725 525030397 7.710000e-57 231.0
35 TraesCS4A01G065300 chr6A 70.994 493 119 20 1204 1684 199015414 199014934 2.930000e-16 97.1
36 TraesCS4A01G065300 chr6A 95.238 42 2 0 3091 3132 420829928 420829887 2.300000e-07 67.6
37 TraesCS4A01G065300 chr6D 79.027 329 63 6 1394 1719 383227842 383227517 1.670000e-53 220.0
38 TraesCS4A01G065300 chr7D 71.146 707 167 31 1033 1719 451187799 451187110 1.340000e-29 141.0
39 TraesCS4A01G065300 chr7A 71.076 688 164 30 1033 1701 545934373 545935044 6.220000e-28 135.0
40 TraesCS4A01G065300 chr7A 84.091 88 8 1 3086 3167 680343958 680344045 2.950000e-11 80.5
41 TraesCS4A01G065300 chr7A 80.435 92 10 1 3086 3169 634098276 634098367 2.980000e-06 63.9
42 TraesCS4A01G065300 chr7A 89.362 47 5 0 3086 3132 634065610 634065656 3.850000e-05 60.2
43 TraesCS4A01G065300 chr5D 82.222 90 8 2 3086 3167 230030088 230029999 1.780000e-08 71.3
44 TraesCS4A01G065300 chr2D 81.053 95 10 2 3081 3167 419467278 419467184 6.400000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G065300 chr4A 62536927 62540496 3569 False 6593.000000 6593 100.000000 1 3570 1 chr4A.!!$F1 3569
1 TraesCS4A01G065300 chr4D 405026966 405030175 3209 False 1350.333333 1858 90.578667 1 3089 3 chr4D.!!$F1 3088
2 TraesCS4A01G065300 chr4D 443206730 443207938 1208 False 362.500000 490 77.756500 1270 2557 2 chr4D.!!$F2 1287
3 TraesCS4A01G065300 chr4B 502960748 502963435 2687 False 1755.000000 1790 91.090500 449 3089 2 chr4B.!!$F2 2640
4 TraesCS4A01G065300 chr1B 664777382 664778073 691 False 608.000000 608 82.714000 1794 2485 1 chr1B.!!$F2 691
5 TraesCS4A01G065300 chr1B 645141333 645142081 748 True 488.000000 488 78.804000 1808 2565 1 chr1B.!!$R3 757
6 TraesCS4A01G065300 chr1B 659723753 659725179 1426 False 431.000000 564 78.205000 1037 2542 2 chr1B.!!$F3 1505
7 TraesCS4A01G065300 chr1D 477189766 477190457 691 False 564.000000 564 81.545000 1794 2485 1 chr1D.!!$F1 691
8 TraesCS4A01G065300 chr1D 474375168 474376594 1426 False 447.500000 569 78.579000 1037 2542 2 chr1D.!!$F2 1505
9 TraesCS4A01G065300 chr1A 573243238 573243849 611 False 560.000000 560 83.333000 1874 2485 1 chr1A.!!$F1 611
10 TraesCS4A01G065300 chr1A 568728745 568729413 668 True 555.000000 555 81.938000 1874 2542 1 chr1A.!!$R2 668

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
250 251 0.035247 TGCGCCGGTATACCCTTTTT 60.035 50.0 16.47 0.00 0.00 1.94 F
1762 1956 0.179100 GATCACCAGCTAGCTTGCGA 60.179 55.0 16.46 12.03 38.13 5.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1790 1984 0.036732 GAGTTGGGATGCACCTGTGA 59.963 55.0 0.51 0.00 38.98 3.58 R
3301 3541 0.179048 TCCTTGGTCACAGTGCACAG 60.179 55.0 21.04 14.44 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.576078 TTTGGAGTTGGATGTGACTGT 57.424 42.857 0.00 0.00 0.00 3.55
25 26 1.537202 GAGTTGGATGTGACTGTTGCC 59.463 52.381 0.00 0.00 0.00 4.52
28 29 2.690778 GGATGTGACTGTTGCCGCC 61.691 63.158 0.00 0.00 0.00 6.13
44 45 3.403057 CCGGACGACGTGTGCTTG 61.403 66.667 4.58 0.00 42.24 4.01
50 51 2.939022 GACGTGTGCTTGGCTCAC 59.061 61.111 12.72 12.72 45.67 3.51
53 54 2.320587 CGTGTGCTTGGCTCACCTC 61.321 63.158 15.70 0.00 46.16 3.85
90 91 0.035739 TCTGTTGAACTAACCGCCCC 59.964 55.000 0.00 0.00 38.55 5.80
93 94 0.250597 GTTGAACTAACCGCCCCTGT 60.251 55.000 0.00 0.00 33.01 4.00
112 113 2.029020 TGTGAGTCTCTGGGTTTGATCG 60.029 50.000 0.65 0.00 0.00 3.69
129 130 4.336280 TGATCGTCAGATACAGGATAGGG 58.664 47.826 0.00 0.00 37.19 3.53
130 131 2.515854 TCGTCAGATACAGGATAGGGC 58.484 52.381 0.00 0.00 0.00 5.19
131 132 2.158519 TCGTCAGATACAGGATAGGGCA 60.159 50.000 0.00 0.00 0.00 5.36
141 142 1.452651 GATAGGGCAGCAGCAGCAA 60.453 57.895 12.41 0.00 45.49 3.91
170 171 8.664798 TGACAGCATGAGTTGTAAATTGTATAC 58.335 33.333 0.00 0.00 39.45 1.47
172 173 7.333423 ACAGCATGAGTTGTAAATTGTATACGT 59.667 33.333 0.00 0.00 39.69 3.57
185 186 8.538409 AAATTGTATACGTCCGGTTTATATCC 57.462 34.615 0.00 0.00 0.00 2.59
187 188 6.899393 TGTATACGTCCGGTTTATATCCTT 57.101 37.500 0.00 0.00 0.00 3.36
210 211 3.836762 TGGTTAACCAGCGCGATTA 57.163 47.368 23.69 0.00 42.01 1.75
219 220 1.136141 CCAGCGCGATTATTCAGATGC 60.136 52.381 12.10 0.00 0.00 3.91
250 251 0.035247 TGCGCCGGTATACCCTTTTT 60.035 50.000 16.47 0.00 0.00 1.94
279 281 7.226128 GGTCACTTTCCCGTCCTATTTAATTAG 59.774 40.741 0.00 0.00 0.00 1.73
280 282 7.767659 GTCACTTTCCCGTCCTATTTAATTAGT 59.232 37.037 4.22 0.00 0.00 2.24
281 283 8.980596 TCACTTTCCCGTCCTATTTAATTAGTA 58.019 33.333 4.22 0.00 0.00 1.82
282 284 9.774413 CACTTTCCCGTCCTATTTAATTAGTAT 57.226 33.333 4.22 0.00 0.00 2.12
320 322 1.736681 GATTGGAGCTCAACTGTCTGC 59.263 52.381 17.19 0.00 38.31 4.26
364 366 2.679837 CAAGCAGGCCATGTAAGTACTG 59.320 50.000 5.01 0.00 0.00 2.74
394 403 4.148871 CGTGCGACTAATAATGATCACAGG 59.851 45.833 0.00 0.00 0.00 4.00
397 406 4.084328 GCGACTAATAATGATCACAGGCAC 60.084 45.833 0.00 0.00 0.00 5.01
413 422 2.363038 AGGCACAGTTTGTACTACGACA 59.637 45.455 0.00 0.00 31.96 4.35
424 433 7.422878 TTTGTACTACGACAAATAATGTGCA 57.577 32.000 0.00 0.00 44.12 4.57
437 446 8.359642 ACAAATAATGTGCATCTAACAACAACT 58.640 29.630 0.00 0.00 41.93 3.16
472 514 2.030958 GGCGTTAACCGTCACCCTG 61.031 63.158 0.00 0.00 41.97 4.45
474 516 1.005394 CGTTAACCGTCACCCTGCT 60.005 57.895 0.00 0.00 0.00 4.24
492 534 2.203126 GAGCAGAAGGCCGATGGG 60.203 66.667 0.00 0.00 46.50 4.00
504 546 4.910585 GATGGGAACGGCGCGGAT 62.911 66.667 22.76 10.14 0.00 4.18
526 568 1.521681 GGAGAAAGCGATCCCGGTG 60.522 63.158 0.00 0.00 46.74 4.94
529 571 2.746277 AAAGCGATCCCGGTGCAC 60.746 61.111 8.80 8.80 46.74 4.57
593 637 3.767230 CCGTGTGTGAGCGCGAAG 61.767 66.667 12.10 0.00 44.10 3.79
721 781 1.578583 CGCCACTCTATTAAACCCCG 58.421 55.000 0.00 0.00 0.00 5.73
740 800 4.394712 CACGCCACCACCTCCTCC 62.395 72.222 0.00 0.00 0.00 4.30
774 844 3.083349 CCCCGGCATCTCACCTCA 61.083 66.667 0.00 0.00 0.00 3.86
787 857 2.179517 CCTCACCTCGTCGCACTC 59.820 66.667 0.00 0.00 0.00 3.51
789 859 2.596338 TCACCTCGTCGCACTCCA 60.596 61.111 0.00 0.00 0.00 3.86
790 860 2.142357 CTCACCTCGTCGCACTCCAA 62.142 60.000 0.00 0.00 0.00 3.53
791 861 2.022129 CACCTCGTCGCACTCCAAC 61.022 63.158 0.00 0.00 0.00 3.77
792 862 2.432628 CCTCGTCGCACTCCAACC 60.433 66.667 0.00 0.00 0.00 3.77
793 863 2.432628 CTCGTCGCACTCCAACCC 60.433 66.667 0.00 0.00 0.00 4.11
794 864 3.934391 CTCGTCGCACTCCAACCCC 62.934 68.421 0.00 0.00 0.00 4.95
795 865 4.308458 CGTCGCACTCCAACCCCA 62.308 66.667 0.00 0.00 0.00 4.96
796 866 2.112297 GTCGCACTCCAACCCCAA 59.888 61.111 0.00 0.00 0.00 4.12
797 867 2.112297 TCGCACTCCAACCCCAAC 59.888 61.111 0.00 0.00 0.00 3.77
798 868 2.983592 CGCACTCCAACCCCAACC 60.984 66.667 0.00 0.00 0.00 3.77
967 1048 3.228017 GGGCCGGGCTAGAGACTC 61.228 72.222 28.80 4.21 0.00 3.36
968 1049 3.597728 GGCCGGGCTAGAGACTCG 61.598 72.222 22.87 0.00 0.00 4.18
969 1050 4.273257 GCCGGGCTAGAGACTCGC 62.273 72.222 12.87 0.00 0.00 5.03
970 1051 3.597728 CCGGGCTAGAGACTCGCC 61.598 72.222 11.78 11.78 40.94 5.54
973 1054 2.123640 GGCTAGAGACTCGCCCCT 60.124 66.667 9.59 0.00 36.49 4.79
974 1055 1.150992 GGCTAGAGACTCGCCCCTA 59.849 63.158 9.59 0.00 36.49 3.53
977 1059 1.751382 GCTAGAGACTCGCCCCTAAGT 60.751 57.143 0.00 0.00 0.00 2.24
1719 1832 2.494445 CGCGACATGCTCCAGGTA 59.506 61.111 0.00 0.00 43.27 3.08
1738 1852 8.269317 TCCAGGTAAGTACTAATAAACCCATTG 58.731 37.037 0.00 0.00 0.00 2.82
1758 1952 2.432146 TGATTCGATCACCAGCTAGCTT 59.568 45.455 16.46 0.00 33.59 3.74
1762 1956 0.179100 GATCACCAGCTAGCTTGCGA 60.179 55.000 16.46 12.03 38.13 5.10
1763 1957 0.467384 ATCACCAGCTAGCTTGCGAT 59.533 50.000 16.46 13.97 38.13 4.58
1768 1962 1.436600 CAGCTAGCTTGCGATATGGG 58.563 55.000 16.46 0.00 38.13 4.00
1784 1978 6.221659 CGATATGGGTATGGATCTGATCATG 58.778 44.000 18.64 0.00 0.00 3.07
2619 2846 0.604578 ATTACCCTGCACGTACGTGT 59.395 50.000 39.56 26.36 46.90 4.49
2677 2904 8.712228 ACCAAATTAAACCAATCTCTTTCTCT 57.288 30.769 0.00 0.00 0.00 3.10
2678 2905 8.797438 ACCAAATTAAACCAATCTCTTTCTCTC 58.203 33.333 0.00 0.00 0.00 3.20
2710 2937 9.343539 CTCTCTTTCTTCCTTTTCCTTTTTCTA 57.656 33.333 0.00 0.00 0.00 2.10
2717 2945 9.744468 TCTTCCTTTTCCTTTTTCTATTTTTCG 57.256 29.630 0.00 0.00 0.00 3.46
2729 2957 7.962934 TTTCTATTTTTCGTCGCCATAAATG 57.037 32.000 0.00 0.00 0.00 2.32
2772 3000 2.879233 GCGTCACACAAGGAGGGGA 61.879 63.158 0.00 0.00 0.00 4.81
2773 3001 1.983224 CGTCACACAAGGAGGGGAT 59.017 57.895 0.00 0.00 0.00 3.85
2774 3002 0.108138 CGTCACACAAGGAGGGGATC 60.108 60.000 0.00 0.00 0.00 3.36
2775 3003 0.984230 GTCACACAAGGAGGGGATCA 59.016 55.000 0.00 0.00 0.00 2.92
2776 3004 1.561542 GTCACACAAGGAGGGGATCAT 59.438 52.381 0.00 0.00 0.00 2.45
2777 3005 2.025887 GTCACACAAGGAGGGGATCATT 60.026 50.000 0.00 0.00 30.35 2.57
2778 3006 2.239654 TCACACAAGGAGGGGATCATTC 59.760 50.000 0.00 0.00 26.83 2.67
2798 3026 7.222161 TCATTCATCATTCACAGGGAGATTAG 58.778 38.462 0.00 0.00 0.00 1.73
2830 3058 8.391075 ACCCGTATATTTATGTTGAATTGGAG 57.609 34.615 0.00 0.00 0.00 3.86
2867 3095 3.178814 CGTGCGTGGTTGTTAAATTGTTC 59.821 43.478 0.00 0.00 0.00 3.18
2888 3116 0.948623 TGTCACGGATTTCCACTGCG 60.949 55.000 0.00 0.00 35.14 5.18
2923 3151 1.914764 CATTGGCACTGGGGGCTTT 60.915 57.895 0.00 0.00 0.00 3.51
2938 3166 3.599343 GGGCTTTGTCAATCAAATTCCC 58.401 45.455 11.78 11.78 43.78 3.97
2942 3170 4.622740 GCTTTGTCAATCAAATTCCCTTCG 59.377 41.667 0.00 0.00 43.78 3.79
2953 3181 4.841443 AATTCCCTTCGGTTGTGTAAAC 57.159 40.909 0.00 0.00 0.00 2.01
2967 3195 6.072175 GGTTGTGTAAACCTTCTTCATGCATA 60.072 38.462 0.00 0.00 37.34 3.14
2998 3238 4.670221 GCACTTCTTTCTCGGTATTGCTTG 60.670 45.833 0.00 0.00 0.00 4.01
3006 3246 5.258456 TCTCGGTATTGCTTGTAGGTTAG 57.742 43.478 0.00 0.00 0.00 2.34
3007 3247 4.708421 TCTCGGTATTGCTTGTAGGTTAGT 59.292 41.667 0.00 0.00 0.00 2.24
3008 3248 5.887598 TCTCGGTATTGCTTGTAGGTTAGTA 59.112 40.000 0.00 0.00 0.00 1.82
3009 3249 6.039047 TCTCGGTATTGCTTGTAGGTTAGTAG 59.961 42.308 0.00 0.00 0.00 2.57
3010 3250 5.887598 TCGGTATTGCTTGTAGGTTAGTAGA 59.112 40.000 0.00 0.00 0.00 2.59
3011 3251 6.548622 TCGGTATTGCTTGTAGGTTAGTAGAT 59.451 38.462 0.00 0.00 0.00 1.98
3025 3265 7.437748 AGGTTAGTAGATGATGATGTAACTGC 58.562 38.462 0.00 0.00 0.00 4.40
3029 3269 4.767578 AGATGATGATGTAACTGCCAGT 57.232 40.909 0.00 0.00 0.00 4.00
3030 3270 4.449131 AGATGATGATGTAACTGCCAGTG 58.551 43.478 0.00 0.00 0.00 3.66
3032 3272 3.337358 TGATGATGTAACTGCCAGTGTG 58.663 45.455 0.00 0.00 0.00 3.82
3073 3313 8.496751 GTGTCATTAGAGGTTTTCAGTTCTTAC 58.503 37.037 0.00 0.00 0.00 2.34
3089 3329 6.195244 CAGTTCTTACGCATATTGTTGAATGC 59.805 38.462 0.00 0.00 44.02 3.56
3090 3330 6.094048 AGTTCTTACGCATATTGTTGAATGCT 59.906 34.615 5.83 0.00 45.03 3.79
3091 3331 7.279981 AGTTCTTACGCATATTGTTGAATGCTA 59.720 33.333 5.83 0.00 45.03 3.49
3092 3332 6.943981 TCTTACGCATATTGTTGAATGCTAC 58.056 36.000 5.83 0.00 45.03 3.58
3093 3333 6.761242 TCTTACGCATATTGTTGAATGCTACT 59.239 34.615 5.83 0.00 45.03 2.57
3094 3334 5.409643 ACGCATATTGTTGAATGCTACTC 57.590 39.130 5.83 0.00 45.03 2.59
3095 3335 4.273480 ACGCATATTGTTGAATGCTACTCC 59.727 41.667 5.83 0.00 45.03 3.85
3096 3336 4.319766 CGCATATTGTTGAATGCTACTCCC 60.320 45.833 5.83 0.00 45.03 4.30
3097 3337 4.823989 GCATATTGTTGAATGCTACTCCCT 59.176 41.667 0.21 0.00 44.08 4.20
3098 3338 5.049129 GCATATTGTTGAATGCTACTCCCTC 60.049 44.000 0.21 0.00 44.08 4.30
3099 3339 4.851639 ATTGTTGAATGCTACTCCCTCT 57.148 40.909 0.00 0.00 0.00 3.69
3100 3340 3.616956 TGTTGAATGCTACTCCCTCTG 57.383 47.619 0.00 0.00 0.00 3.35
3101 3341 2.906389 TGTTGAATGCTACTCCCTCTGT 59.094 45.455 0.00 0.00 0.00 3.41
3102 3342 4.093743 TGTTGAATGCTACTCCCTCTGTA 58.906 43.478 0.00 0.00 0.00 2.74
3103 3343 4.530553 TGTTGAATGCTACTCCCTCTGTAA 59.469 41.667 0.00 0.00 0.00 2.41
3104 3344 5.012664 TGTTGAATGCTACTCCCTCTGTAAA 59.987 40.000 0.00 0.00 0.00 2.01
3105 3345 5.086104 TGAATGCTACTCCCTCTGTAAAC 57.914 43.478 0.00 0.00 0.00 2.01
3106 3346 4.777896 TGAATGCTACTCCCTCTGTAAACT 59.222 41.667 0.00 0.00 0.00 2.66
3107 3347 5.955959 TGAATGCTACTCCCTCTGTAAACTA 59.044 40.000 0.00 0.00 0.00 2.24
3108 3348 6.439375 TGAATGCTACTCCCTCTGTAAACTAA 59.561 38.462 0.00 0.00 0.00 2.24
3109 3349 7.125811 TGAATGCTACTCCCTCTGTAAACTAAT 59.874 37.037 0.00 0.00 0.00 1.73
3110 3350 8.548880 AATGCTACTCCCTCTGTAAACTAATA 57.451 34.615 0.00 0.00 0.00 0.98
3111 3351 8.728596 ATGCTACTCCCTCTGTAAACTAATAT 57.271 34.615 0.00 0.00 0.00 1.28
3112 3352 9.824216 ATGCTACTCCCTCTGTAAACTAATATA 57.176 33.333 0.00 0.00 0.00 0.86
3113 3353 9.298250 TGCTACTCCCTCTGTAAACTAATATAG 57.702 37.037 0.00 0.00 0.00 1.31
3114 3354 8.741841 GCTACTCCCTCTGTAAACTAATATAGG 58.258 40.741 0.00 0.00 0.00 2.57
3117 3357 9.536510 ACTCCCTCTGTAAACTAATATAGGATC 57.463 37.037 0.00 0.00 0.00 3.36
3118 3358 8.577048 TCCCTCTGTAAACTAATATAGGATCG 57.423 38.462 0.00 0.00 0.00 3.69
3119 3359 8.168725 TCCCTCTGTAAACTAATATAGGATCGT 58.831 37.037 0.00 0.00 0.00 3.73
3120 3360 8.804204 CCCTCTGTAAACTAATATAGGATCGTT 58.196 37.037 0.00 0.00 0.00 3.85
3161 3401 9.838339 AAACAATCCTATATTAGTTCACAGAGG 57.162 33.333 0.00 0.00 0.00 3.69
3162 3402 7.967908 ACAATCCTATATTAGTTCACAGAGGG 58.032 38.462 0.00 0.00 0.00 4.30
3163 3403 7.789831 ACAATCCTATATTAGTTCACAGAGGGA 59.210 37.037 0.00 0.00 0.00 4.20
3164 3404 8.310382 CAATCCTATATTAGTTCACAGAGGGAG 58.690 40.741 0.00 0.00 0.00 4.30
3165 3405 6.923670 TCCTATATTAGTTCACAGAGGGAGT 58.076 40.000 0.00 0.00 0.00 3.85
3166 3406 8.053776 TCCTATATTAGTTCACAGAGGGAGTA 57.946 38.462 0.00 0.00 0.00 2.59
3167 3407 8.164733 TCCTATATTAGTTCACAGAGGGAGTAG 58.835 40.741 0.00 0.00 0.00 2.57
3168 3408 7.945664 CCTATATTAGTTCACAGAGGGAGTAGT 59.054 40.741 0.00 0.00 0.00 2.73
3172 3412 8.694581 ATTAGTTCACAGAGGGAGTAGTATAC 57.305 38.462 0.00 0.00 43.47 1.47
3190 3430 9.672086 GTAGTATACTTCTCTGCAAGTATTCTG 57.328 37.037 18.41 0.00 44.01 3.02
3191 3431 8.299990 AGTATACTTCTCTGCAAGTATTCTGT 57.700 34.615 12.73 0.00 44.01 3.41
3192 3432 9.409918 AGTATACTTCTCTGCAAGTATTCTGTA 57.590 33.333 12.73 0.00 44.01 2.74
3195 3435 6.998802 ACTTCTCTGCAAGTATTCTGTAAGT 58.001 36.000 0.00 0.00 34.70 2.24
3196 3436 6.870965 ACTTCTCTGCAAGTATTCTGTAAGTG 59.129 38.462 0.00 0.00 34.70 3.16
3197 3437 5.171476 TCTCTGCAAGTATTCTGTAAGTGC 58.829 41.667 0.00 0.00 31.61 4.40
3198 3438 4.893608 TCTGCAAGTATTCTGTAAGTGCA 58.106 39.130 0.00 0.00 38.13 4.57
3199 3439 5.304778 TCTGCAAGTATTCTGTAAGTGCAA 58.695 37.500 0.00 0.00 39.78 4.08
3200 3440 5.179368 TCTGCAAGTATTCTGTAAGTGCAAC 59.821 40.000 0.00 0.00 39.78 4.17
3201 3441 4.215399 TGCAAGTATTCTGTAAGTGCAACC 59.785 41.667 0.00 0.00 37.56 3.77
3202 3442 4.215399 GCAAGTATTCTGTAAGTGCAACCA 59.785 41.667 0.00 0.00 37.80 3.67
3203 3443 5.689819 CAAGTATTCTGTAAGTGCAACCAC 58.310 41.667 0.00 0.00 42.39 4.16
3204 3444 4.324267 AGTATTCTGTAAGTGCAACCACC 58.676 43.478 0.00 0.00 43.09 4.61
3205 3445 2.719531 TTCTGTAAGTGCAACCACCA 57.280 45.000 0.00 0.00 43.09 4.17
3206 3446 2.254546 TCTGTAAGTGCAACCACCAG 57.745 50.000 0.00 0.00 43.09 4.00
3207 3447 1.488812 TCTGTAAGTGCAACCACCAGT 59.511 47.619 0.00 0.00 43.09 4.00
3208 3448 2.092646 TCTGTAAGTGCAACCACCAGTT 60.093 45.455 0.00 0.00 43.09 3.16
3209 3449 3.134985 TCTGTAAGTGCAACCACCAGTTA 59.865 43.478 0.00 0.00 43.09 2.24
3210 3450 3.207778 TGTAAGTGCAACCACCAGTTAC 58.792 45.455 10.58 10.58 43.98 2.50
3211 3451 2.729028 AAGTGCAACCACCAGTTACT 57.271 45.000 0.00 0.00 43.09 2.24
3212 3452 2.256117 AGTGCAACCACCAGTTACTC 57.744 50.000 0.00 0.00 43.09 2.59
3213 3453 1.488812 AGTGCAACCACCAGTTACTCA 59.511 47.619 0.00 0.00 43.09 3.41
3214 3454 2.106511 AGTGCAACCACCAGTTACTCAT 59.893 45.455 0.00 0.00 43.09 2.90
3215 3455 2.226437 GTGCAACCACCAGTTACTCATG 59.774 50.000 0.00 0.00 36.18 3.07
3216 3456 2.105649 TGCAACCACCAGTTACTCATGA 59.894 45.455 0.00 0.00 36.18 3.07
3217 3457 3.146066 GCAACCACCAGTTACTCATGAA 58.854 45.455 0.00 0.00 36.18 2.57
3218 3458 3.758554 GCAACCACCAGTTACTCATGAAT 59.241 43.478 0.00 0.00 36.18 2.57
3219 3459 4.218417 GCAACCACCAGTTACTCATGAATT 59.782 41.667 0.00 0.00 36.18 2.17
3220 3460 5.278957 GCAACCACCAGTTACTCATGAATTT 60.279 40.000 0.00 0.00 36.18 1.82
3221 3461 6.381801 CAACCACCAGTTACTCATGAATTTC 58.618 40.000 0.00 0.00 36.18 2.17
3222 3462 5.630121 ACCACCAGTTACTCATGAATTTCA 58.370 37.500 0.75 0.75 0.00 2.69
3223 3463 6.248433 ACCACCAGTTACTCATGAATTTCAT 58.752 36.000 6.06 6.06 37.65 2.57
3224 3464 7.309377 AACCACCAGTTACTCATGAATTTCATG 60.309 37.037 26.55 26.55 45.17 3.07
3245 3485 9.834628 TTCATGGTCGTATAATTTGAAGAAAAC 57.165 29.630 0.00 0.00 0.00 2.43
3246 3486 9.226606 TCATGGTCGTATAATTTGAAGAAAACT 57.773 29.630 0.00 0.00 0.00 2.66
3247 3487 9.490663 CATGGTCGTATAATTTGAAGAAAACTC 57.509 33.333 0.00 0.00 0.00 3.01
3248 3488 8.610248 TGGTCGTATAATTTGAAGAAAACTCA 57.390 30.769 0.00 0.00 0.00 3.41
3249 3489 9.226606 TGGTCGTATAATTTGAAGAAAACTCAT 57.773 29.630 0.00 0.00 0.00 2.90
3250 3490 9.490663 GGTCGTATAATTTGAAGAAAACTCATG 57.509 33.333 0.00 0.00 0.00 3.07
3251 3491 9.490663 GTCGTATAATTTGAAGAAAACTCATGG 57.509 33.333 0.00 0.00 0.00 3.66
3252 3492 9.226606 TCGTATAATTTGAAGAAAACTCATGGT 57.773 29.630 0.00 0.00 0.00 3.55
3253 3493 9.490663 CGTATAATTTGAAGAAAACTCATGGTC 57.509 33.333 0.00 0.00 0.00 4.02
3254 3494 9.788960 GTATAATTTGAAGAAAACTCATGGTCC 57.211 33.333 0.00 0.00 0.00 4.46
3255 3495 6.729690 AATTTGAAGAAAACTCATGGTCCA 57.270 33.333 0.00 0.00 0.00 4.02
3256 3496 5.514274 TTTGAAGAAAACTCATGGTCCAC 57.486 39.130 0.00 0.00 0.00 4.02
3257 3497 4.163441 TGAAGAAAACTCATGGTCCACA 57.837 40.909 0.00 0.00 0.00 4.17
3258 3498 3.882888 TGAAGAAAACTCATGGTCCACAC 59.117 43.478 0.00 0.00 0.00 3.82
3259 3499 3.576078 AGAAAACTCATGGTCCACACA 57.424 42.857 0.00 0.00 0.00 3.72
3260 3500 3.897239 AGAAAACTCATGGTCCACACAA 58.103 40.909 0.00 0.00 0.00 3.33
3261 3501 3.885297 AGAAAACTCATGGTCCACACAAG 59.115 43.478 0.00 0.00 0.00 3.16
3262 3502 3.576078 AAACTCATGGTCCACACAAGA 57.424 42.857 0.00 0.00 0.00 3.02
3263 3503 2.550830 ACTCATGGTCCACACAAGAC 57.449 50.000 0.00 0.00 0.00 3.01
3264 3504 1.768275 ACTCATGGTCCACACAAGACA 59.232 47.619 0.00 0.00 35.89 3.41
3265 3505 2.373169 ACTCATGGTCCACACAAGACAT 59.627 45.455 0.00 0.00 35.89 3.06
3266 3506 3.181440 ACTCATGGTCCACACAAGACATT 60.181 43.478 0.00 0.00 35.89 2.71
3267 3507 4.041567 ACTCATGGTCCACACAAGACATTA 59.958 41.667 0.00 0.00 35.89 1.90
3268 3508 4.323417 TCATGGTCCACACAAGACATTAC 58.677 43.478 0.00 0.00 35.89 1.89
3269 3509 4.041567 TCATGGTCCACACAAGACATTACT 59.958 41.667 0.00 0.00 35.89 2.24
3270 3510 4.002906 TGGTCCACACAAGACATTACTC 57.997 45.455 0.00 0.00 35.89 2.59
3271 3511 3.244422 TGGTCCACACAAGACATTACTCC 60.244 47.826 0.00 0.00 35.89 3.85
3272 3512 3.335579 GTCCACACAAGACATTACTCCC 58.664 50.000 0.00 0.00 34.27 4.30
3273 3513 3.008049 GTCCACACAAGACATTACTCCCT 59.992 47.826 0.00 0.00 34.27 4.20
3274 3514 3.260884 TCCACACAAGACATTACTCCCTC 59.739 47.826 0.00 0.00 0.00 4.30
3275 3515 3.600388 CACACAAGACATTACTCCCTCC 58.400 50.000 0.00 0.00 0.00 4.30
3276 3516 2.233922 ACACAAGACATTACTCCCTCCG 59.766 50.000 0.00 0.00 0.00 4.63
3277 3517 2.233922 CACAAGACATTACTCCCTCCGT 59.766 50.000 0.00 0.00 0.00 4.69
3278 3518 2.496470 ACAAGACATTACTCCCTCCGTC 59.504 50.000 0.00 0.00 0.00 4.79
3279 3519 2.761208 CAAGACATTACTCCCTCCGTCT 59.239 50.000 0.00 0.00 35.31 4.18
3280 3520 3.947612 AGACATTACTCCCTCCGTCTA 57.052 47.619 0.00 0.00 32.18 2.59
3281 3521 3.822940 AGACATTACTCCCTCCGTCTAG 58.177 50.000 0.00 0.00 32.18 2.43
3282 3522 2.885894 GACATTACTCCCTCCGTCTAGG 59.114 54.545 0.00 0.00 42.97 3.02
3283 3523 2.244252 ACATTACTCCCTCCGTCTAGGT 59.756 50.000 0.00 0.00 41.99 3.08
3284 3524 2.431954 TTACTCCCTCCGTCTAGGTG 57.568 55.000 0.00 0.00 41.99 4.00
3285 3525 1.588239 TACTCCCTCCGTCTAGGTGA 58.412 55.000 0.00 0.00 41.99 4.02
3286 3526 0.256464 ACTCCCTCCGTCTAGGTGAG 59.744 60.000 0.00 0.00 41.99 3.51
3287 3527 0.256464 CTCCCTCCGTCTAGGTGAGT 59.744 60.000 0.00 0.00 41.99 3.41
3288 3528 1.489649 CTCCCTCCGTCTAGGTGAGTA 59.510 57.143 0.00 0.00 41.99 2.59
3289 3529 1.918262 TCCCTCCGTCTAGGTGAGTAA 59.082 52.381 0.00 0.00 41.99 2.24
3290 3530 2.092538 TCCCTCCGTCTAGGTGAGTAAG 60.093 54.545 0.00 0.00 41.99 2.34
3291 3531 2.356947 CCCTCCGTCTAGGTGAGTAAGT 60.357 54.545 0.00 0.00 41.99 2.24
3292 3532 2.944349 CCTCCGTCTAGGTGAGTAAGTC 59.056 54.545 0.00 0.00 41.99 3.01
3293 3533 3.607741 CTCCGTCTAGGTGAGTAAGTCA 58.392 50.000 0.00 0.00 41.99 3.41
3294 3534 4.200874 CTCCGTCTAGGTGAGTAAGTCAT 58.799 47.826 0.00 0.00 41.99 3.06
3295 3535 4.197750 TCCGTCTAGGTGAGTAAGTCATC 58.802 47.826 0.00 0.00 41.99 2.92
3297 3537 4.641094 CCGTCTAGGTGAGTAAGTCATCTT 59.359 45.833 0.00 0.00 45.09 2.40
3298 3538 5.821470 CCGTCTAGGTGAGTAAGTCATCTTA 59.179 44.000 0.00 0.00 45.09 2.10
3299 3539 6.017770 CCGTCTAGGTGAGTAAGTCATCTTAG 60.018 46.154 0.00 0.00 45.09 2.18
3300 3540 6.762187 CGTCTAGGTGAGTAAGTCATCTTAGA 59.238 42.308 0.00 0.00 45.09 2.10
3301 3541 7.254522 CGTCTAGGTGAGTAAGTCATCTTAGAC 60.255 44.444 0.00 8.85 45.09 2.59
3302 3542 7.771826 GTCTAGGTGAGTAAGTCATCTTAGACT 59.228 40.741 15.40 0.00 45.09 3.24
3303 3543 6.767524 AGGTGAGTAAGTCATCTTAGACTG 57.232 41.667 0.00 0.00 45.09 3.51
3304 3544 6.249951 AGGTGAGTAAGTCATCTTAGACTGT 58.750 40.000 0.00 0.00 45.09 3.55
3305 3545 6.151985 AGGTGAGTAAGTCATCTTAGACTGTG 59.848 42.308 0.00 0.00 45.09 3.66
3306 3546 9.186335 AGGTGAGTAAGTCATCTTAGACTGTGC 62.186 44.444 0.00 0.00 45.09 4.57
3310 3550 4.185467 AGTCATCTTAGACTGTGCACTG 57.815 45.455 20.83 20.83 46.58 3.66
3311 3551 3.576118 AGTCATCTTAGACTGTGCACTGT 59.424 43.478 27.02 27.02 46.58 3.55
3312 3552 3.677121 GTCATCTTAGACTGTGCACTGTG 59.323 47.826 30.91 17.62 35.65 3.66
3313 3553 3.573967 TCATCTTAGACTGTGCACTGTGA 59.426 43.478 30.91 21.73 0.00 3.58
3314 3554 3.371102 TCTTAGACTGTGCACTGTGAC 57.629 47.619 30.91 18.48 0.00 3.67
3315 3555 2.035961 TCTTAGACTGTGCACTGTGACC 59.964 50.000 30.91 17.81 0.00 4.02
3316 3556 1.408969 TAGACTGTGCACTGTGACCA 58.591 50.000 30.91 11.98 0.00 4.02
3317 3557 0.541392 AGACTGTGCACTGTGACCAA 59.459 50.000 30.91 1.36 0.00 3.67
3318 3558 0.940126 GACTGTGCACTGTGACCAAG 59.060 55.000 30.91 13.87 0.00 3.61
3319 3559 0.464373 ACTGTGCACTGTGACCAAGG 60.464 55.000 26.26 3.26 0.00 3.61
3320 3560 0.179048 CTGTGCACTGTGACCAAGGA 60.179 55.000 19.41 0.00 0.00 3.36
3321 3561 0.179048 TGTGCACTGTGACCAAGGAG 60.179 55.000 19.41 0.00 0.00 3.69
3322 3562 0.886490 GTGCACTGTGACCAAGGAGG 60.886 60.000 12.86 0.00 45.67 4.30
3323 3563 1.053835 TGCACTGTGACCAAGGAGGA 61.054 55.000 12.86 0.00 41.22 3.71
3324 3564 0.321122 GCACTGTGACCAAGGAGGAG 60.321 60.000 12.86 0.00 41.22 3.69
3325 3565 1.342074 CACTGTGACCAAGGAGGAGA 58.658 55.000 0.32 0.00 41.22 3.71
3326 3566 1.694150 CACTGTGACCAAGGAGGAGAA 59.306 52.381 0.32 0.00 41.22 2.87
3327 3567 2.104792 CACTGTGACCAAGGAGGAGAAA 59.895 50.000 0.32 0.00 41.22 2.52
3328 3568 2.777692 ACTGTGACCAAGGAGGAGAAAA 59.222 45.455 0.00 0.00 41.22 2.29
3329 3569 3.202151 ACTGTGACCAAGGAGGAGAAAAA 59.798 43.478 0.00 0.00 41.22 1.94
3355 3595 7.623268 ACGAGAAAACTTAATGTTCATTTGC 57.377 32.000 3.36 0.00 38.03 3.68
3356 3596 7.425606 ACGAGAAAACTTAATGTTCATTTGCT 58.574 30.769 3.36 0.00 38.03 3.91
3357 3597 8.564574 ACGAGAAAACTTAATGTTCATTTGCTA 58.435 29.630 3.36 0.00 38.03 3.49
3358 3598 9.393249 CGAGAAAACTTAATGTTCATTTGCTAA 57.607 29.630 3.36 0.00 38.03 3.09
3392 3632 3.855689 ATGCAATGAACTAACCACTGC 57.144 42.857 0.00 0.00 0.00 4.40
3393 3633 2.580962 TGCAATGAACTAACCACTGCA 58.419 42.857 0.00 0.00 36.06 4.41
3394 3634 3.156293 TGCAATGAACTAACCACTGCAT 58.844 40.909 0.00 0.00 33.65 3.96
3395 3635 3.057386 TGCAATGAACTAACCACTGCATG 60.057 43.478 0.00 0.00 33.65 4.06
3396 3636 3.057315 GCAATGAACTAACCACTGCATGT 60.057 43.478 0.00 0.00 0.00 3.21
3397 3637 4.726416 CAATGAACTAACCACTGCATGTC 58.274 43.478 0.00 0.00 0.00 3.06
3398 3638 2.412870 TGAACTAACCACTGCATGTCG 58.587 47.619 0.00 0.00 0.00 4.35
3399 3639 2.224185 TGAACTAACCACTGCATGTCGT 60.224 45.455 0.00 0.00 0.00 4.34
3400 3640 1.795768 ACTAACCACTGCATGTCGTG 58.204 50.000 8.87 8.87 0.00 4.35
3401 3641 1.070134 ACTAACCACTGCATGTCGTGT 59.930 47.619 13.12 2.00 0.00 4.49
3402 3642 2.143122 CTAACCACTGCATGTCGTGTT 58.857 47.619 13.12 10.39 0.00 3.32
3403 3643 1.388547 AACCACTGCATGTCGTGTTT 58.611 45.000 13.12 5.09 0.00 2.83
3404 3644 0.662619 ACCACTGCATGTCGTGTTTG 59.337 50.000 13.12 3.87 0.00 2.93
3405 3645 0.943673 CCACTGCATGTCGTGTTTGA 59.056 50.000 13.12 0.00 0.00 2.69
3406 3646 1.536766 CCACTGCATGTCGTGTTTGAT 59.463 47.619 13.12 0.00 0.00 2.57
3407 3647 2.741517 CCACTGCATGTCGTGTTTGATA 59.258 45.455 13.12 0.00 0.00 2.15
3408 3648 3.181517 CCACTGCATGTCGTGTTTGATAG 60.182 47.826 13.12 0.00 0.00 2.08
3409 3649 3.433274 CACTGCATGTCGTGTTTGATAGT 59.567 43.478 7.95 0.00 0.00 2.12
3410 3650 3.679980 ACTGCATGTCGTGTTTGATAGTC 59.320 43.478 0.00 0.00 0.00 2.59
3411 3651 3.925379 TGCATGTCGTGTTTGATAGTCT 58.075 40.909 0.00 0.00 0.00 3.24
3412 3652 3.926527 TGCATGTCGTGTTTGATAGTCTC 59.073 43.478 0.00 0.00 0.00 3.36
3413 3653 3.926527 GCATGTCGTGTTTGATAGTCTCA 59.073 43.478 0.00 0.00 0.00 3.27
3414 3654 4.388773 GCATGTCGTGTTTGATAGTCTCAA 59.611 41.667 0.00 0.00 42.15 3.02
3415 3655 5.445142 GCATGTCGTGTTTGATAGTCTCAAG 60.445 44.000 0.00 0.00 44.48 3.02
3416 3656 5.196341 TGTCGTGTTTGATAGTCTCAAGT 57.804 39.130 0.00 0.00 44.48 3.16
3417 3657 5.220381 TGTCGTGTTTGATAGTCTCAAGTC 58.780 41.667 0.00 0.00 44.48 3.01
3418 3658 5.220381 GTCGTGTTTGATAGTCTCAAGTCA 58.780 41.667 0.00 0.00 44.48 3.41
3419 3659 5.864474 GTCGTGTTTGATAGTCTCAAGTCAT 59.136 40.000 0.00 0.00 44.48 3.06
3420 3660 6.366332 GTCGTGTTTGATAGTCTCAAGTCATT 59.634 38.462 0.00 0.00 44.48 2.57
3421 3661 7.541091 GTCGTGTTTGATAGTCTCAAGTCATTA 59.459 37.037 0.00 0.00 44.48 1.90
3422 3662 8.085909 TCGTGTTTGATAGTCTCAAGTCATTAA 58.914 33.333 0.00 0.00 44.48 1.40
3423 3663 8.708742 CGTGTTTGATAGTCTCAAGTCATTAAA 58.291 33.333 0.00 0.00 44.48 1.52
3426 3666 9.548208 GTTTGATAGTCTCAAGTCATTAAAAGC 57.452 33.333 0.00 0.00 44.48 3.51
3427 3667 8.846943 TTGATAGTCTCAAGTCATTAAAAGCA 57.153 30.769 0.00 0.00 38.97 3.91
3428 3668 9.453572 TTGATAGTCTCAAGTCATTAAAAGCAT 57.546 29.630 0.00 0.00 38.97 3.79
3429 3669 8.886719 TGATAGTCTCAAGTCATTAAAAGCATG 58.113 33.333 0.00 0.00 0.00 4.06
3430 3670 5.947443 AGTCTCAAGTCATTAAAAGCATGC 58.053 37.500 10.51 10.51 0.00 4.06
3431 3671 5.474532 AGTCTCAAGTCATTAAAAGCATGCA 59.525 36.000 21.98 0.00 0.00 3.96
3432 3672 6.152323 AGTCTCAAGTCATTAAAAGCATGCAT 59.848 34.615 21.98 4.57 0.00 3.96
3433 3673 7.337689 AGTCTCAAGTCATTAAAAGCATGCATA 59.662 33.333 21.98 7.12 0.00 3.14
3434 3674 7.430502 GTCTCAAGTCATTAAAAGCATGCATAC 59.569 37.037 21.98 1.47 0.00 2.39
3435 3675 6.563422 TCAAGTCATTAAAAGCATGCATACC 58.437 36.000 21.98 0.00 0.00 2.73
3436 3676 5.520376 AGTCATTAAAAGCATGCATACCC 57.480 39.130 21.98 0.00 0.00 3.69
3437 3677 4.342092 AGTCATTAAAAGCATGCATACCCC 59.658 41.667 21.98 0.00 0.00 4.95
3438 3678 4.099266 GTCATTAAAAGCATGCATACCCCA 59.901 41.667 21.98 0.00 0.00 4.96
3439 3679 4.099266 TCATTAAAAGCATGCATACCCCAC 59.901 41.667 21.98 0.00 0.00 4.61
3440 3680 1.935799 AAAAGCATGCATACCCCACA 58.064 45.000 21.98 0.00 0.00 4.17
3441 3681 2.163810 AAAGCATGCATACCCCACAT 57.836 45.000 21.98 0.00 0.00 3.21
3442 3682 1.696063 AAGCATGCATACCCCACATC 58.304 50.000 21.98 0.00 0.00 3.06
3443 3683 0.848735 AGCATGCATACCCCACATCT 59.151 50.000 21.98 0.00 0.00 2.90
3444 3684 1.202855 AGCATGCATACCCCACATCTC 60.203 52.381 21.98 0.00 0.00 2.75
3445 3685 1.202855 GCATGCATACCCCACATCTCT 60.203 52.381 14.21 0.00 0.00 3.10
3446 3686 2.750807 GCATGCATACCCCACATCTCTT 60.751 50.000 14.21 0.00 0.00 2.85
3447 3687 3.496692 GCATGCATACCCCACATCTCTTA 60.497 47.826 14.21 0.00 0.00 2.10
3448 3688 4.808665 GCATGCATACCCCACATCTCTTAT 60.809 45.833 14.21 0.00 0.00 1.73
3449 3689 5.319453 CATGCATACCCCACATCTCTTATT 58.681 41.667 0.00 0.00 0.00 1.40
3450 3690 4.717877 TGCATACCCCACATCTCTTATTG 58.282 43.478 0.00 0.00 0.00 1.90
3451 3691 4.074970 GCATACCCCACATCTCTTATTGG 58.925 47.826 0.00 0.00 0.00 3.16
3452 3692 4.446311 GCATACCCCACATCTCTTATTGGT 60.446 45.833 0.00 0.00 0.00 3.67
3453 3693 5.694995 CATACCCCACATCTCTTATTGGTT 58.305 41.667 0.00 0.00 0.00 3.67
3454 3694 3.968265 ACCCCACATCTCTTATTGGTTG 58.032 45.455 0.00 0.00 0.00 3.77
3455 3695 3.591527 ACCCCACATCTCTTATTGGTTGA 59.408 43.478 0.00 0.00 0.00 3.18
3456 3696 3.947834 CCCCACATCTCTTATTGGTTGAC 59.052 47.826 0.00 0.00 0.00 3.18
3457 3697 4.567537 CCCCACATCTCTTATTGGTTGACA 60.568 45.833 0.00 0.00 0.00 3.58
3458 3698 5.195940 CCCACATCTCTTATTGGTTGACAT 58.804 41.667 0.00 0.00 0.00 3.06
3459 3699 5.066893 CCCACATCTCTTATTGGTTGACATG 59.933 44.000 0.00 0.00 0.00 3.21
3460 3700 5.649395 CCACATCTCTTATTGGTTGACATGT 59.351 40.000 0.00 0.00 0.00 3.21
3461 3701 6.183360 CCACATCTCTTATTGGTTGACATGTC 60.183 42.308 19.27 19.27 0.00 3.06
3462 3702 6.372381 CACATCTCTTATTGGTTGACATGTCA 59.628 38.462 24.56 24.56 37.91 3.58
3463 3703 6.942005 ACATCTCTTATTGGTTGACATGTCAA 59.058 34.615 32.36 32.36 46.27 3.18
3495 3735 8.515473 AAAAACGAAGTAGAATTTAATGCACC 57.485 30.769 0.00 0.00 45.00 5.01
3496 3736 5.464965 ACGAAGTAGAATTTAATGCACCG 57.535 39.130 0.00 0.00 41.94 4.94
3497 3737 4.201783 ACGAAGTAGAATTTAATGCACCGC 60.202 41.667 0.00 0.00 41.94 5.68
3498 3738 3.944422 AGTAGAATTTAATGCACCGCG 57.056 42.857 0.00 0.00 0.00 6.46
3499 3739 2.031683 AGTAGAATTTAATGCACCGCGC 59.968 45.455 0.00 0.00 42.89 6.86
3500 3740 0.100503 AGAATTTAATGCACCGCGCC 59.899 50.000 0.00 0.00 41.33 6.53
3501 3741 0.100503 GAATTTAATGCACCGCGCCT 59.899 50.000 0.00 0.00 41.33 5.52
3502 3742 1.332375 GAATTTAATGCACCGCGCCTA 59.668 47.619 0.00 0.00 41.33 3.93
3503 3743 1.384525 ATTTAATGCACCGCGCCTAA 58.615 45.000 0.00 0.00 41.33 2.69
3504 3744 0.730265 TTTAATGCACCGCGCCTAAG 59.270 50.000 0.00 0.00 41.33 2.18
3505 3745 0.391927 TTAATGCACCGCGCCTAAGT 60.392 50.000 0.00 0.00 41.33 2.24
3506 3746 1.087202 TAATGCACCGCGCCTAAGTG 61.087 55.000 0.00 4.02 41.33 3.16
3507 3747 3.605749 ATGCACCGCGCCTAAGTGT 62.606 57.895 12.83 0.00 41.33 3.55
3508 3748 3.047877 GCACCGCGCCTAAGTGTT 61.048 61.111 12.83 0.00 33.96 3.32
3509 3749 2.613506 GCACCGCGCCTAAGTGTTT 61.614 57.895 12.83 0.00 33.96 2.83
3510 3750 1.946267 CACCGCGCCTAAGTGTTTT 59.054 52.632 0.00 0.00 0.00 2.43
3511 3751 0.385473 CACCGCGCCTAAGTGTTTTG 60.385 55.000 0.00 0.00 0.00 2.44
3512 3752 1.209127 CCGCGCCTAAGTGTTTTGG 59.791 57.895 0.00 0.00 33.04 3.28
3513 3753 1.209127 CGCGCCTAAGTGTTTTGGG 59.791 57.895 0.00 0.00 30.91 4.12
3514 3754 1.231958 CGCGCCTAAGTGTTTTGGGA 61.232 55.000 0.00 0.00 30.91 4.37
3515 3755 1.173913 GCGCCTAAGTGTTTTGGGAT 58.826 50.000 0.00 0.00 30.91 3.85
3516 3756 1.544246 GCGCCTAAGTGTTTTGGGATT 59.456 47.619 0.00 0.00 30.91 3.01
3517 3757 2.750712 GCGCCTAAGTGTTTTGGGATTA 59.249 45.455 0.00 0.00 30.91 1.75
3518 3758 3.380320 GCGCCTAAGTGTTTTGGGATTAT 59.620 43.478 0.00 0.00 30.91 1.28
3519 3759 4.142249 GCGCCTAAGTGTTTTGGGATTATT 60.142 41.667 0.00 0.00 30.91 1.40
3520 3760 5.623596 GCGCCTAAGTGTTTTGGGATTATTT 60.624 40.000 0.00 0.00 30.91 1.40
3521 3761 5.804979 CGCCTAAGTGTTTTGGGATTATTTG 59.195 40.000 0.00 0.00 30.91 2.32
3522 3762 6.106003 GCCTAAGTGTTTTGGGATTATTTGG 58.894 40.000 0.00 0.00 30.91 3.28
3523 3763 6.295632 GCCTAAGTGTTTTGGGATTATTTGGT 60.296 38.462 0.00 0.00 30.91 3.67
3524 3764 7.676004 CCTAAGTGTTTTGGGATTATTTGGTT 58.324 34.615 0.00 0.00 0.00 3.67
3525 3765 8.154203 CCTAAGTGTTTTGGGATTATTTGGTTT 58.846 33.333 0.00 0.00 0.00 3.27
3526 3766 9.554395 CTAAGTGTTTTGGGATTATTTGGTTTT 57.446 29.630 0.00 0.00 0.00 2.43
3527 3767 8.445275 AAGTGTTTTGGGATTATTTGGTTTTC 57.555 30.769 0.00 0.00 0.00 2.29
3528 3768 6.704050 AGTGTTTTGGGATTATTTGGTTTTCG 59.296 34.615 0.00 0.00 0.00 3.46
3529 3769 6.480651 GTGTTTTGGGATTATTTGGTTTTCGT 59.519 34.615 0.00 0.00 0.00 3.85
3530 3770 7.652507 GTGTTTTGGGATTATTTGGTTTTCGTA 59.347 33.333 0.00 0.00 0.00 3.43
3531 3771 8.202137 TGTTTTGGGATTATTTGGTTTTCGTAA 58.798 29.630 0.00 0.00 0.00 3.18
3532 3772 8.705134 GTTTTGGGATTATTTGGTTTTCGTAAG 58.295 33.333 0.00 0.00 0.00 2.34
3533 3773 6.518208 TGGGATTATTTGGTTTTCGTAAGG 57.482 37.500 0.00 0.00 38.47 2.69
3534 3774 6.011481 TGGGATTATTTGGTTTTCGTAAGGT 58.989 36.000 0.00 0.00 38.47 3.50
3535 3775 6.071840 TGGGATTATTTGGTTTTCGTAAGGTG 60.072 38.462 0.00 0.00 38.47 4.00
3536 3776 6.151480 GGGATTATTTGGTTTTCGTAAGGTGA 59.849 38.462 0.00 0.00 38.47 4.02
3537 3777 7.025365 GGATTATTTGGTTTTCGTAAGGTGAC 58.975 38.462 0.00 0.00 38.47 3.67
3554 3794 3.144657 TGACTTACACACCTAGACGGA 57.855 47.619 0.00 0.00 36.31 4.69
3555 3795 3.079578 TGACTTACACACCTAGACGGAG 58.920 50.000 0.00 0.00 36.31 4.63
3556 3796 2.422832 GACTTACACACCTAGACGGAGG 59.577 54.545 0.00 0.00 42.89 4.30
3557 3797 1.749634 CTTACACACCTAGACGGAGGG 59.250 57.143 5.42 0.00 41.36 4.30
3558 3798 0.994247 TACACACCTAGACGGAGGGA 59.006 55.000 5.42 0.00 41.36 4.20
3559 3799 0.323542 ACACACCTAGACGGAGGGAG 60.324 60.000 5.42 0.78 41.36 4.30
3560 3800 0.323542 CACACCTAGACGGAGGGAGT 60.324 60.000 5.42 1.31 41.36 3.85
3561 3801 1.064906 CACACCTAGACGGAGGGAGTA 60.065 57.143 5.42 0.00 41.36 2.59
3562 3802 1.064832 ACACCTAGACGGAGGGAGTAC 60.065 57.143 5.42 0.00 41.36 2.73
3563 3803 0.179936 ACCTAGACGGAGGGAGTACG 59.820 60.000 5.42 0.00 41.36 3.67
3564 3804 0.467384 CCTAGACGGAGGGAGTACGA 59.533 60.000 0.00 0.00 32.39 3.43
3565 3805 1.134280 CCTAGACGGAGGGAGTACGAA 60.134 57.143 0.00 0.00 32.39 3.85
3566 3806 2.636830 CTAGACGGAGGGAGTACGAAA 58.363 52.381 0.00 0.00 0.00 3.46
3567 3807 1.915141 AGACGGAGGGAGTACGAAAA 58.085 50.000 0.00 0.00 0.00 2.29
3568 3808 1.817447 AGACGGAGGGAGTACGAAAAG 59.183 52.381 0.00 0.00 0.00 2.27
3569 3809 1.815003 GACGGAGGGAGTACGAAAAGA 59.185 52.381 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 3.403057 CCAAGCACACGTCGTCCG 61.403 66.667 0.00 0.00 44.03 4.79
44 45 2.107953 GCCTGATCGAGGTGAGCC 59.892 66.667 11.37 0.00 44.97 4.70
50 51 0.527817 GTACCAACGCCTGATCGAGG 60.528 60.000 6.79 6.79 46.13 4.63
53 54 3.688136 CGTACCAACGCCTGATCG 58.312 61.111 0.00 0.00 43.12 3.69
90 91 3.594134 GATCAAACCCAGAGACTCACAG 58.406 50.000 5.02 0.00 0.00 3.66
93 94 2.231478 GACGATCAAACCCAGAGACTCA 59.769 50.000 5.02 0.00 0.00 3.41
112 113 2.028567 GCTGCCCTATCCTGTATCTGAC 60.029 54.545 0.00 0.00 0.00 3.51
129 130 1.443872 GTCATGTTGCTGCTGCTGC 60.444 57.895 22.51 22.51 40.48 5.25
130 131 0.109735 CTGTCATGTTGCTGCTGCTG 60.110 55.000 17.00 6.67 40.48 4.41
131 132 1.863662 GCTGTCATGTTGCTGCTGCT 61.864 55.000 17.00 0.00 40.48 4.24
170 171 4.861102 ACCTAAGGATATAAACCGGACG 57.139 45.455 9.46 0.00 0.00 4.79
172 173 4.970640 ACCAACCTAAGGATATAAACCGGA 59.029 41.667 9.46 0.00 0.00 5.14
210 211 1.674441 CGGTCATGCTTGCATCTGAAT 59.326 47.619 4.99 0.00 0.00 2.57
219 220 4.465512 GGCGCACGGTCATGCTTG 62.466 66.667 10.83 0.00 43.80 4.01
289 291 0.449388 GCTCCAATCACTTGCTTCGG 59.551 55.000 0.00 0.00 0.00 4.30
320 322 4.802248 GCCTGATACTATCCCTTTGAGCTG 60.802 50.000 0.00 0.00 0.00 4.24
394 403 4.782252 TTTGTCGTAGTACAAACTGTGC 57.218 40.909 0.38 0.00 42.78 4.57
424 433 8.515414 GCTCCTGAAATTTAGTTGTTGTTAGAT 58.485 33.333 0.00 0.00 0.00 1.98
437 446 3.088532 ACGCCAATGCTCCTGAAATTTA 58.911 40.909 0.00 0.00 34.43 1.40
472 514 2.178890 CATCGGCCTTCTGCTCAGC 61.179 63.158 0.00 0.00 40.92 4.26
474 516 2.586245 CCATCGGCCTTCTGCTCA 59.414 61.111 0.00 0.00 40.92 4.26
504 546 2.186903 GGATCGCTTTCTCCGGCA 59.813 61.111 0.00 0.00 0.00 5.69
507 549 2.279517 CCGGGATCGCTTTCTCCG 60.280 66.667 8.28 2.85 40.32 4.63
525 567 1.285950 CAGTCTTCCTCGTCGTGCA 59.714 57.895 0.00 0.00 0.00 4.57
526 568 0.520404 TACAGTCTTCCTCGTCGTGC 59.480 55.000 0.00 0.00 0.00 5.34
529 571 1.060842 CGACTACAGTCTTCCTCGTCG 59.939 57.143 7.72 0.00 42.66 5.12
530 572 1.202054 GCGACTACAGTCTTCCTCGTC 60.202 57.143 7.72 0.00 42.66 4.20
531 573 0.803740 GCGACTACAGTCTTCCTCGT 59.196 55.000 7.72 0.00 42.66 4.18
532 574 0.803117 TGCGACTACAGTCTTCCTCG 59.197 55.000 7.72 0.00 42.66 4.63
535 577 0.108756 GGGTGCGACTACAGTCTTCC 60.109 60.000 7.72 6.76 42.66 3.46
756 824 4.554036 GAGGTGAGATGCCGGGGC 62.554 72.222 2.18 1.86 42.35 5.80
759 827 2.187946 GGTGAGGTGAGATGCCGG 59.812 66.667 0.00 0.00 0.00 6.13
761 829 1.142748 CGAGGTGAGGTGAGATGCC 59.857 63.158 0.00 0.00 0.00 4.40
762 830 0.179124 GACGAGGTGAGGTGAGATGC 60.179 60.000 0.00 0.00 0.00 3.91
764 832 1.658686 GCGACGAGGTGAGGTGAGAT 61.659 60.000 0.00 0.00 0.00 2.75
765 833 2.333417 GCGACGAGGTGAGGTGAGA 61.333 63.158 0.00 0.00 0.00 3.27
767 835 2.596338 TGCGACGAGGTGAGGTGA 60.596 61.111 0.00 0.00 0.00 4.02
770 840 2.179517 GAGTGCGACGAGGTGAGG 59.820 66.667 0.00 0.00 0.00 3.86
774 844 2.338984 GTTGGAGTGCGACGAGGT 59.661 61.111 0.00 0.00 0.00 3.85
787 857 2.525629 GGTTGGGGTTGGGGTTGG 60.526 66.667 0.00 0.00 0.00 3.77
789 859 3.852421 GGGGTTGGGGTTGGGGTT 61.852 66.667 0.00 0.00 0.00 4.11
791 861 4.631740 GTGGGGTTGGGGTTGGGG 62.632 72.222 0.00 0.00 0.00 4.96
792 862 3.838913 TGTGGGGTTGGGGTTGGG 61.839 66.667 0.00 0.00 0.00 4.12
793 863 2.523168 GTGTGGGGTTGGGGTTGG 60.523 66.667 0.00 0.00 0.00 3.77
794 864 2.523168 GGTGTGGGGTTGGGGTTG 60.523 66.667 0.00 0.00 0.00 3.77
795 865 3.840132 GGGTGTGGGGTTGGGGTT 61.840 66.667 0.00 0.00 0.00 4.11
797 867 4.299796 CTGGGTGTGGGGTTGGGG 62.300 72.222 0.00 0.00 0.00 4.96
798 868 4.994756 GCTGGGTGTGGGGTTGGG 62.995 72.222 0.00 0.00 0.00 4.12
964 1045 1.328430 GGTGCTACTTAGGGGCGAGT 61.328 60.000 0.00 0.00 0.00 4.18
966 1047 2.420568 CGGTGCTACTTAGGGGCGA 61.421 63.158 0.00 0.00 0.00 5.54
967 1048 1.745320 ATCGGTGCTACTTAGGGGCG 61.745 60.000 0.00 0.00 0.00 6.13
968 1049 0.033642 GATCGGTGCTACTTAGGGGC 59.966 60.000 0.00 0.00 0.00 5.80
969 1050 0.314302 CGATCGGTGCTACTTAGGGG 59.686 60.000 7.38 0.00 0.00 4.79
970 1051 1.001597 GTCGATCGGTGCTACTTAGGG 60.002 57.143 16.41 0.00 0.00 3.53
971 1052 1.333881 CGTCGATCGGTGCTACTTAGG 60.334 57.143 16.41 0.00 35.71 2.69
972 1053 2.020079 CGTCGATCGGTGCTACTTAG 57.980 55.000 16.41 0.00 35.71 2.18
1180 1272 2.430921 GTGCACGAGGTCGAGGTG 60.431 66.667 0.00 0.00 43.02 4.00
1533 1646 1.372087 CGATGTCCTTGGGCTTGAGC 61.372 60.000 0.00 0.00 41.14 4.26
1719 1832 9.847224 ATCGAATCAATGGGTTTATTAGTACTT 57.153 29.630 0.00 0.00 0.00 2.24
1738 1852 2.799412 CAAGCTAGCTGGTGATCGAATC 59.201 50.000 20.16 0.00 0.00 2.52
1758 1952 3.440127 TCAGATCCATACCCATATCGCA 58.560 45.455 0.00 0.00 0.00 5.10
1762 1956 6.675303 TCACATGATCAGATCCATACCCATAT 59.325 38.462 8.00 0.00 0.00 1.78
1763 1957 6.024893 TCACATGATCAGATCCATACCCATA 58.975 40.000 8.00 0.00 0.00 2.74
1784 1978 1.661341 GGATGCACCTGTGAGATCAC 58.339 55.000 6.01 6.01 46.59 3.06
1790 1984 0.036732 GAGTTGGGATGCACCTGTGA 59.963 55.000 0.51 0.00 38.98 3.58
1791 1985 1.300971 CGAGTTGGGATGCACCTGTG 61.301 60.000 0.00 0.00 38.98 3.66
2600 2827 3.429043 CACGTACGTGCAGGGTAAT 57.571 52.632 32.93 0.00 39.39 1.89
2619 2846 3.327404 GCTCCAGGTTTCGGGGGA 61.327 66.667 0.00 0.00 29.53 4.81
2625 2852 0.322008 CCCACAGAGCTCCAGGTTTC 60.322 60.000 10.93 0.00 0.00 2.78
2677 2904 4.713792 AAGGAAGAAAGAGAGCAAAGGA 57.286 40.909 0.00 0.00 0.00 3.36
2678 2905 5.278709 GGAAAAGGAAGAAAGAGAGCAAAGG 60.279 44.000 0.00 0.00 0.00 3.11
2729 2957 4.039973 TCCCACGAGTATCCATGTAATTCC 59.960 45.833 0.00 0.00 0.00 3.01
2730 2958 5.209818 TCCCACGAGTATCCATGTAATTC 57.790 43.478 0.00 0.00 0.00 2.17
2772 3000 5.641789 TCTCCCTGTGAATGATGAATGAT 57.358 39.130 0.00 0.00 0.00 2.45
2773 3001 5.641789 ATCTCCCTGTGAATGATGAATGA 57.358 39.130 0.00 0.00 0.00 2.57
2774 3002 6.996879 ACTAATCTCCCTGTGAATGATGAATG 59.003 38.462 0.00 0.00 0.00 2.67
2775 3003 7.146715 ACTAATCTCCCTGTGAATGATGAAT 57.853 36.000 0.00 0.00 0.00 2.57
2776 3004 6.566079 ACTAATCTCCCTGTGAATGATGAA 57.434 37.500 0.00 0.00 0.00 2.57
2777 3005 5.221322 CGACTAATCTCCCTGTGAATGATGA 60.221 44.000 0.00 0.00 0.00 2.92
2778 3006 4.987285 CGACTAATCTCCCTGTGAATGATG 59.013 45.833 0.00 0.00 0.00 3.07
2798 3026 5.064441 ACATAAATATACGGGTAGCCGAC 57.936 43.478 37.90 0.00 36.94 4.79
2819 3047 2.093783 CGTTAGCGTCCTCCAATTCAAC 59.906 50.000 0.00 0.00 0.00 3.18
2820 3048 2.343101 CGTTAGCGTCCTCCAATTCAA 58.657 47.619 0.00 0.00 0.00 2.69
2821 3049 2.004583 CGTTAGCGTCCTCCAATTCA 57.995 50.000 0.00 0.00 0.00 2.57
2846 3074 3.178814 CGAACAATTTAACAACCACGCAC 59.821 43.478 0.00 0.00 0.00 5.34
2847 3075 3.181499 ACGAACAATTTAACAACCACGCA 60.181 39.130 0.00 0.00 0.00 5.24
2848 3076 3.178814 CACGAACAATTTAACAACCACGC 59.821 43.478 0.00 0.00 0.00 5.34
2849 3077 4.344448 ACACGAACAATTTAACAACCACG 58.656 39.130 0.00 0.00 0.00 4.94
2867 3095 0.790207 CAGTGGAAATCCGTGACACG 59.210 55.000 21.02 21.02 42.11 4.49
2888 3116 4.338400 GCCAATGTAAGTATCCCTTTCACC 59.662 45.833 0.00 0.00 33.88 4.02
2938 3166 4.573201 TGAAGAAGGTTTACACAACCGAAG 59.427 41.667 0.00 0.00 44.82 3.79
2942 3170 4.037446 TGCATGAAGAAGGTTTACACAACC 59.963 41.667 0.00 0.00 40.58 3.77
2967 3195 2.161012 CGAGAAAGAAGTGCATGCATGT 59.839 45.455 25.64 14.94 0.00 3.21
2971 3211 1.160137 ACCGAGAAAGAAGTGCATGC 58.840 50.000 11.82 11.82 0.00 4.06
2978 3218 5.292101 CCTACAAGCAATACCGAGAAAGAAG 59.708 44.000 0.00 0.00 0.00 2.85
2979 3219 5.175859 CCTACAAGCAATACCGAGAAAGAA 58.824 41.667 0.00 0.00 0.00 2.52
2981 3221 4.504858 ACCTACAAGCAATACCGAGAAAG 58.495 43.478 0.00 0.00 0.00 2.62
2982 3222 4.546829 ACCTACAAGCAATACCGAGAAA 57.453 40.909 0.00 0.00 0.00 2.52
2984 3224 4.708421 ACTAACCTACAAGCAATACCGAGA 59.292 41.667 0.00 0.00 0.00 4.04
2998 3238 9.900710 CAGTTACATCATCATCTACTAACCTAC 57.099 37.037 0.00 0.00 0.00 3.18
3006 3246 5.464722 CACTGGCAGTTACATCATCATCTAC 59.535 44.000 19.43 0.00 0.00 2.59
3007 3247 5.129320 ACACTGGCAGTTACATCATCATCTA 59.871 40.000 19.43 0.00 0.00 1.98
3008 3248 4.080695 ACACTGGCAGTTACATCATCATCT 60.081 41.667 19.43 0.00 0.00 2.90
3009 3249 4.034858 CACACTGGCAGTTACATCATCATC 59.965 45.833 19.43 0.00 0.00 2.92
3010 3250 3.943381 CACACTGGCAGTTACATCATCAT 59.057 43.478 19.43 0.00 0.00 2.45
3011 3251 3.244526 ACACACTGGCAGTTACATCATCA 60.245 43.478 19.43 0.00 0.00 3.07
3022 3262 2.622942 ACCAAACAATACACACTGGCAG 59.377 45.455 14.16 14.16 0.00 4.85
3025 3265 3.303725 CGACACCAAACAATACACACTGG 60.304 47.826 0.00 0.00 0.00 4.00
3029 3269 3.271729 ACACGACACCAAACAATACACA 58.728 40.909 0.00 0.00 0.00 3.72
3030 3270 3.310227 TGACACGACACCAAACAATACAC 59.690 43.478 0.00 0.00 0.00 2.90
3032 3272 4.742438 ATGACACGACACCAAACAATAC 57.258 40.909 0.00 0.00 0.00 1.89
3091 3331 9.536510 GATCCTATATTAGTTTACAGAGGGAGT 57.463 37.037 0.00 0.00 0.00 3.85
3092 3332 8.679100 CGATCCTATATTAGTTTACAGAGGGAG 58.321 40.741 0.00 0.00 0.00 4.30
3093 3333 8.168725 ACGATCCTATATTAGTTTACAGAGGGA 58.831 37.037 0.00 0.00 0.00 4.20
3094 3334 8.350852 ACGATCCTATATTAGTTTACAGAGGG 57.649 38.462 0.00 0.00 0.00 4.30
3135 3375 9.838339 CCTCTGTGAACTAATATAGGATTGTTT 57.162 33.333 0.00 0.00 0.00 2.83
3136 3376 8.432805 CCCTCTGTGAACTAATATAGGATTGTT 58.567 37.037 0.00 0.00 0.00 2.83
3137 3377 7.789831 TCCCTCTGTGAACTAATATAGGATTGT 59.210 37.037 0.00 0.00 0.00 2.71
3138 3378 8.195165 TCCCTCTGTGAACTAATATAGGATTG 57.805 38.462 0.00 0.00 0.00 2.67
3139 3379 8.013667 ACTCCCTCTGTGAACTAATATAGGATT 58.986 37.037 0.00 0.00 0.00 3.01
3140 3380 7.540183 ACTCCCTCTGTGAACTAATATAGGAT 58.460 38.462 0.00 0.00 0.00 3.24
3141 3381 6.923670 ACTCCCTCTGTGAACTAATATAGGA 58.076 40.000 0.00 0.00 0.00 2.94
3142 3382 7.945664 ACTACTCCCTCTGTGAACTAATATAGG 59.054 40.741 0.00 0.00 0.00 2.57
3143 3383 8.927675 ACTACTCCCTCTGTGAACTAATATAG 57.072 38.462 0.00 0.00 0.00 1.31
3146 3386 9.790344 GTATACTACTCCCTCTGTGAACTAATA 57.210 37.037 0.00 0.00 0.00 0.98
3147 3387 8.504409 AGTATACTACTCCCTCTGTGAACTAAT 58.496 37.037 2.75 0.00 32.47 1.73
3148 3388 7.870027 AGTATACTACTCCCTCTGTGAACTAA 58.130 38.462 2.75 0.00 32.47 2.24
3149 3389 7.448915 AGTATACTACTCCCTCTGTGAACTA 57.551 40.000 2.75 0.00 32.47 2.24
3150 3390 6.330178 AGTATACTACTCCCTCTGTGAACT 57.670 41.667 2.75 0.00 32.47 3.01
3151 3391 6.829811 AGAAGTATACTACTCCCTCTGTGAAC 59.170 42.308 5.65 0.00 38.26 3.18
3152 3392 6.971340 AGAAGTATACTACTCCCTCTGTGAA 58.029 40.000 5.65 0.00 38.26 3.18
3153 3393 6.387513 AGAGAAGTATACTACTCCCTCTGTGA 59.612 42.308 5.65 0.00 42.20 3.58
3154 3394 6.485313 CAGAGAAGTATACTACTCCCTCTGTG 59.515 46.154 23.55 18.27 46.89 3.66
3155 3395 6.597562 CAGAGAAGTATACTACTCCCTCTGT 58.402 44.000 23.55 13.32 46.89 3.41
3157 3397 5.132985 TGCAGAGAAGTATACTACTCCCTCT 59.867 44.000 5.65 3.99 43.38 3.69
3158 3398 5.378332 TGCAGAGAAGTATACTACTCCCTC 58.622 45.833 5.65 8.10 38.26 4.30
3159 3399 5.390087 TGCAGAGAAGTATACTACTCCCT 57.610 43.478 5.65 0.00 38.26 4.20
3160 3400 5.595133 ACTTGCAGAGAAGTATACTACTCCC 59.405 44.000 5.65 0.00 38.26 4.30
3161 3401 6.702716 ACTTGCAGAGAAGTATACTACTCC 57.297 41.667 5.65 0.00 38.26 3.85
3162 3402 9.887406 GAATACTTGCAGAGAAGTATACTACTC 57.113 37.037 5.65 0.87 44.75 2.59
3163 3403 9.635404 AGAATACTTGCAGAGAAGTATACTACT 57.365 33.333 5.65 3.79 44.75 2.57
3164 3404 9.672086 CAGAATACTTGCAGAGAAGTATACTAC 57.328 37.037 5.65 1.45 44.75 2.73
3165 3405 9.409918 ACAGAATACTTGCAGAGAAGTATACTA 57.590 33.333 5.65 0.00 44.75 1.82
3166 3406 8.299990 ACAGAATACTTGCAGAGAAGTATACT 57.700 34.615 8.78 0.00 44.75 2.12
3169 3409 8.754080 ACTTACAGAATACTTGCAGAGAAGTAT 58.246 33.333 3.42 3.42 46.57 2.12
3170 3410 8.029522 CACTTACAGAATACTTGCAGAGAAGTA 58.970 37.037 0.00 0.00 41.53 2.24
3171 3411 6.870965 CACTTACAGAATACTTGCAGAGAAGT 59.129 38.462 3.37 0.00 39.54 3.01
3172 3412 6.183360 GCACTTACAGAATACTTGCAGAGAAG 60.183 42.308 3.37 0.00 0.00 2.85
3173 3413 5.639506 GCACTTACAGAATACTTGCAGAGAA 59.360 40.000 3.37 0.00 0.00 2.87
3174 3414 5.171476 GCACTTACAGAATACTTGCAGAGA 58.829 41.667 3.37 0.00 0.00 3.10
3175 3415 4.931601 TGCACTTACAGAATACTTGCAGAG 59.068 41.667 0.00 0.00 32.33 3.35
3176 3416 4.893608 TGCACTTACAGAATACTTGCAGA 58.106 39.130 0.00 0.00 32.33 4.26
3177 3417 5.385617 GTTGCACTTACAGAATACTTGCAG 58.614 41.667 0.00 0.00 36.61 4.41
3178 3418 4.215399 GGTTGCACTTACAGAATACTTGCA 59.785 41.667 0.00 0.00 34.46 4.08
3179 3419 4.215399 TGGTTGCACTTACAGAATACTTGC 59.785 41.667 0.00 0.00 0.00 4.01
3180 3420 5.334879 GGTGGTTGCACTTACAGAATACTTG 60.335 44.000 0.00 0.00 0.00 3.16
3181 3421 4.760204 GGTGGTTGCACTTACAGAATACTT 59.240 41.667 0.00 0.00 0.00 2.24
3182 3422 4.202419 TGGTGGTTGCACTTACAGAATACT 60.202 41.667 0.00 0.00 0.00 2.12
3183 3423 4.069304 TGGTGGTTGCACTTACAGAATAC 58.931 43.478 0.00 0.00 0.00 1.89
3184 3424 4.202419 ACTGGTGGTTGCACTTACAGAATA 60.202 41.667 10.45 0.00 0.00 1.75
3185 3425 3.149196 CTGGTGGTTGCACTTACAGAAT 58.851 45.455 0.00 0.00 0.00 2.40
3186 3426 2.092646 ACTGGTGGTTGCACTTACAGAA 60.093 45.455 10.45 0.00 0.00 3.02
3187 3427 1.488812 ACTGGTGGTTGCACTTACAGA 59.511 47.619 10.45 0.00 0.00 3.41
3188 3428 1.967319 ACTGGTGGTTGCACTTACAG 58.033 50.000 0.00 0.00 0.00 2.74
3189 3429 2.428544 AACTGGTGGTTGCACTTACA 57.571 45.000 0.00 0.00 36.70 2.41
3190 3430 3.473625 AGTAACTGGTGGTTGCACTTAC 58.526 45.455 0.00 0.00 41.84 2.34
3191 3431 3.134985 TGAGTAACTGGTGGTTGCACTTA 59.865 43.478 0.00 0.00 41.84 2.24
3192 3432 2.092646 TGAGTAACTGGTGGTTGCACTT 60.093 45.455 0.00 0.00 41.84 3.16
3193 3433 1.488812 TGAGTAACTGGTGGTTGCACT 59.511 47.619 0.00 0.00 41.84 4.40
3194 3434 1.961793 TGAGTAACTGGTGGTTGCAC 58.038 50.000 0.00 0.00 41.84 4.57
3195 3435 2.105649 TCATGAGTAACTGGTGGTTGCA 59.894 45.455 0.00 0.00 41.84 4.08
3196 3436 2.778299 TCATGAGTAACTGGTGGTTGC 58.222 47.619 0.00 0.00 40.13 4.17
3197 3437 5.964958 AATTCATGAGTAACTGGTGGTTG 57.035 39.130 0.00 0.00 38.75 3.77
3198 3438 6.068010 TGAAATTCATGAGTAACTGGTGGTT 58.932 36.000 0.00 0.00 41.54 3.67
3199 3439 5.630121 TGAAATTCATGAGTAACTGGTGGT 58.370 37.500 0.00 0.00 0.00 4.16
3200 3440 6.764308 ATGAAATTCATGAGTAACTGGTGG 57.236 37.500 7.79 0.00 35.43 4.61
3219 3459 9.834628 GTTTTCTTCAAATTATACGACCATGAA 57.165 29.630 0.00 0.00 0.00 2.57
3220 3460 9.226606 AGTTTTCTTCAAATTATACGACCATGA 57.773 29.630 0.00 0.00 0.00 3.07
3221 3461 9.490663 GAGTTTTCTTCAAATTATACGACCATG 57.509 33.333 0.00 0.00 0.00 3.66
3222 3462 9.226606 TGAGTTTTCTTCAAATTATACGACCAT 57.773 29.630 0.00 0.00 0.00 3.55
3223 3463 8.610248 TGAGTTTTCTTCAAATTATACGACCA 57.390 30.769 0.00 0.00 0.00 4.02
3224 3464 9.490663 CATGAGTTTTCTTCAAATTATACGACC 57.509 33.333 0.00 0.00 0.00 4.79
3225 3465 9.490663 CCATGAGTTTTCTTCAAATTATACGAC 57.509 33.333 0.00 0.00 0.00 4.34
3226 3466 9.226606 ACCATGAGTTTTCTTCAAATTATACGA 57.773 29.630 0.00 0.00 0.00 3.43
3227 3467 9.490663 GACCATGAGTTTTCTTCAAATTATACG 57.509 33.333 0.00 0.00 0.00 3.06
3228 3468 9.788960 GGACCATGAGTTTTCTTCAAATTATAC 57.211 33.333 0.00 0.00 0.00 1.47
3229 3469 9.527157 TGGACCATGAGTTTTCTTCAAATTATA 57.473 29.630 0.00 0.00 0.00 0.98
3230 3470 8.306761 GTGGACCATGAGTTTTCTTCAAATTAT 58.693 33.333 0.00 0.00 0.00 1.28
3231 3471 7.286546 TGTGGACCATGAGTTTTCTTCAAATTA 59.713 33.333 0.00 0.00 0.00 1.40
3232 3472 6.098124 TGTGGACCATGAGTTTTCTTCAAATT 59.902 34.615 0.00 0.00 0.00 1.82
3233 3473 5.598005 TGTGGACCATGAGTTTTCTTCAAAT 59.402 36.000 0.00 0.00 0.00 2.32
3234 3474 4.952957 TGTGGACCATGAGTTTTCTTCAAA 59.047 37.500 0.00 0.00 0.00 2.69
3235 3475 4.338118 GTGTGGACCATGAGTTTTCTTCAA 59.662 41.667 0.00 0.00 0.00 2.69
3236 3476 3.882888 GTGTGGACCATGAGTTTTCTTCA 59.117 43.478 0.00 0.00 0.00 3.02
3237 3477 3.882888 TGTGTGGACCATGAGTTTTCTTC 59.117 43.478 0.00 0.00 0.00 2.87
3238 3478 3.897239 TGTGTGGACCATGAGTTTTCTT 58.103 40.909 0.00 0.00 0.00 2.52
3239 3479 3.576078 TGTGTGGACCATGAGTTTTCT 57.424 42.857 0.00 0.00 0.00 2.52
3240 3480 3.882888 TCTTGTGTGGACCATGAGTTTTC 59.117 43.478 0.00 0.00 0.00 2.29
3241 3481 3.632145 GTCTTGTGTGGACCATGAGTTTT 59.368 43.478 0.00 0.00 0.00 2.43
3242 3482 3.214328 GTCTTGTGTGGACCATGAGTTT 58.786 45.455 0.00 0.00 0.00 2.66
3243 3483 2.172505 TGTCTTGTGTGGACCATGAGTT 59.827 45.455 0.00 0.00 33.22 3.01
3244 3484 1.768275 TGTCTTGTGTGGACCATGAGT 59.232 47.619 0.00 0.00 33.22 3.41
3245 3485 2.549064 TGTCTTGTGTGGACCATGAG 57.451 50.000 0.00 0.00 33.22 2.90
3246 3486 3.507162 AATGTCTTGTGTGGACCATGA 57.493 42.857 0.00 0.00 33.22 3.07
3247 3487 4.326826 AGTAATGTCTTGTGTGGACCATG 58.673 43.478 0.00 0.00 33.22 3.66
3248 3488 4.565652 GGAGTAATGTCTTGTGTGGACCAT 60.566 45.833 0.00 0.00 33.22 3.55
3249 3489 3.244422 GGAGTAATGTCTTGTGTGGACCA 60.244 47.826 0.00 0.00 33.22 4.02
3250 3490 3.335579 GGAGTAATGTCTTGTGTGGACC 58.664 50.000 0.00 0.00 33.22 4.46
3251 3491 3.008049 AGGGAGTAATGTCTTGTGTGGAC 59.992 47.826 0.00 0.00 0.00 4.02
3252 3492 3.248024 AGGGAGTAATGTCTTGTGTGGA 58.752 45.455 0.00 0.00 0.00 4.02
3253 3493 3.600388 GAGGGAGTAATGTCTTGTGTGG 58.400 50.000 0.00 0.00 0.00 4.17
3254 3494 3.600388 GGAGGGAGTAATGTCTTGTGTG 58.400 50.000 0.00 0.00 0.00 3.82
3255 3495 2.233922 CGGAGGGAGTAATGTCTTGTGT 59.766 50.000 0.00 0.00 0.00 3.72
3256 3496 2.233922 ACGGAGGGAGTAATGTCTTGTG 59.766 50.000 0.00 0.00 0.00 3.33
3257 3497 2.496470 GACGGAGGGAGTAATGTCTTGT 59.504 50.000 0.00 0.00 0.00 3.16
3258 3498 2.761208 AGACGGAGGGAGTAATGTCTTG 59.239 50.000 0.00 0.00 33.15 3.02
3259 3499 3.103080 AGACGGAGGGAGTAATGTCTT 57.897 47.619 0.00 0.00 33.15 3.01
3260 3500 2.830651 AGACGGAGGGAGTAATGTCT 57.169 50.000 0.00 0.00 32.19 3.41
3261 3501 2.885894 CCTAGACGGAGGGAGTAATGTC 59.114 54.545 0.00 0.00 32.39 3.06
3262 3502 2.244252 ACCTAGACGGAGGGAGTAATGT 59.756 50.000 5.42 0.00 41.36 2.71
3263 3503 2.623889 CACCTAGACGGAGGGAGTAATG 59.376 54.545 5.42 0.00 41.36 1.90
3264 3504 2.512896 TCACCTAGACGGAGGGAGTAAT 59.487 50.000 5.42 0.00 41.36 1.89
3265 3505 1.918262 TCACCTAGACGGAGGGAGTAA 59.082 52.381 5.42 0.00 41.36 2.24
3266 3506 1.489649 CTCACCTAGACGGAGGGAGTA 59.510 57.143 5.42 0.00 41.36 2.59
3267 3507 0.256464 CTCACCTAGACGGAGGGAGT 59.744 60.000 5.42 0.00 41.36 3.85
3268 3508 0.256464 ACTCACCTAGACGGAGGGAG 59.744 60.000 12.80 12.80 41.36 4.30
3269 3509 1.588239 TACTCACCTAGACGGAGGGA 58.412 55.000 5.42 0.16 41.36 4.20
3270 3510 2.299521 CTTACTCACCTAGACGGAGGG 58.700 57.143 5.42 0.00 41.36 4.30
3271 3511 2.944349 GACTTACTCACCTAGACGGAGG 59.056 54.545 0.00 0.00 42.89 4.30
3272 3512 3.607741 TGACTTACTCACCTAGACGGAG 58.392 50.000 0.00 0.00 36.31 4.63
3273 3513 3.708403 TGACTTACTCACCTAGACGGA 57.292 47.619 0.00 0.00 36.31 4.69
3274 3514 4.200874 AGATGACTTACTCACCTAGACGG 58.799 47.826 0.00 0.00 39.35 4.79
3275 3515 5.821516 AAGATGACTTACTCACCTAGACG 57.178 43.478 0.00 0.00 34.28 4.18
3276 3516 7.771826 AGTCTAAGATGACTTACTCACCTAGAC 59.228 40.741 0.00 0.00 44.01 2.59
3277 3517 7.771361 CAGTCTAAGATGACTTACTCACCTAGA 59.229 40.741 0.00 0.00 44.01 2.43
3278 3518 7.554835 ACAGTCTAAGATGACTTACTCACCTAG 59.445 40.741 0.00 0.00 44.01 3.02
3279 3519 7.337184 CACAGTCTAAGATGACTTACTCACCTA 59.663 40.741 0.00 0.00 44.01 3.08
3280 3520 6.151985 CACAGTCTAAGATGACTTACTCACCT 59.848 42.308 0.00 0.00 44.01 4.00
3281 3521 6.326375 CACAGTCTAAGATGACTTACTCACC 58.674 44.000 0.00 0.00 44.01 4.02
3282 3522 5.802956 GCACAGTCTAAGATGACTTACTCAC 59.197 44.000 0.00 0.00 44.01 3.51
3283 3523 5.476945 TGCACAGTCTAAGATGACTTACTCA 59.523 40.000 0.00 0.00 44.01 3.41
3284 3524 5.802956 GTGCACAGTCTAAGATGACTTACTC 59.197 44.000 13.17 0.00 44.01 2.59
3285 3525 5.478679 AGTGCACAGTCTAAGATGACTTACT 59.521 40.000 21.04 0.00 44.01 2.24
3286 3526 5.574830 CAGTGCACAGTCTAAGATGACTTAC 59.425 44.000 21.04 0.00 44.01 2.34
3287 3527 5.243954 ACAGTGCACAGTCTAAGATGACTTA 59.756 40.000 21.04 0.00 44.01 2.24
3288 3528 4.039730 ACAGTGCACAGTCTAAGATGACTT 59.960 41.667 21.04 0.00 44.01 3.01
3290 3530 3.677121 CACAGTGCACAGTCTAAGATGAC 59.323 47.826 21.04 0.00 37.23 3.06
3291 3531 3.573967 TCACAGTGCACAGTCTAAGATGA 59.426 43.478 21.04 6.00 0.00 2.92
3292 3532 3.677121 GTCACAGTGCACAGTCTAAGATG 59.323 47.826 21.04 7.51 0.00 2.90
3293 3533 3.306364 GGTCACAGTGCACAGTCTAAGAT 60.306 47.826 21.04 0.00 0.00 2.40
3294 3534 2.035961 GGTCACAGTGCACAGTCTAAGA 59.964 50.000 21.04 7.82 0.00 2.10
3295 3535 2.224042 TGGTCACAGTGCACAGTCTAAG 60.224 50.000 21.04 5.34 0.00 2.18
3296 3536 1.760029 TGGTCACAGTGCACAGTCTAA 59.240 47.619 21.04 2.04 0.00 2.10
3297 3537 1.408969 TGGTCACAGTGCACAGTCTA 58.591 50.000 21.04 4.69 0.00 2.59
3298 3538 0.541392 TTGGTCACAGTGCACAGTCT 59.459 50.000 21.04 0.00 0.00 3.24
3299 3539 0.940126 CTTGGTCACAGTGCACAGTC 59.060 55.000 21.04 6.06 0.00 3.51
3300 3540 0.464373 CCTTGGTCACAGTGCACAGT 60.464 55.000 21.04 15.24 0.00 3.55
3301 3541 0.179048 TCCTTGGTCACAGTGCACAG 60.179 55.000 21.04 14.44 0.00 3.66
3302 3542 0.179048 CTCCTTGGTCACAGTGCACA 60.179 55.000 21.04 0.00 0.00 4.57
3303 3543 0.886490 CCTCCTTGGTCACAGTGCAC 60.886 60.000 9.40 9.40 0.00 4.57
3304 3544 1.053835 TCCTCCTTGGTCACAGTGCA 61.054 55.000 0.00 0.00 37.07 4.57
3305 3545 0.321122 CTCCTCCTTGGTCACAGTGC 60.321 60.000 0.00 0.00 37.07 4.40
3306 3546 1.342074 TCTCCTCCTTGGTCACAGTG 58.658 55.000 0.00 0.00 37.07 3.66
3307 3547 2.103153 TTCTCCTCCTTGGTCACAGT 57.897 50.000 0.00 0.00 37.07 3.55
3308 3548 3.492102 TTTTCTCCTCCTTGGTCACAG 57.508 47.619 0.00 0.00 37.07 3.66
3309 3549 3.943671 TTTTTCTCCTCCTTGGTCACA 57.056 42.857 0.00 0.00 37.07 3.58
3329 3569 8.539674 GCAAATGAACATTAAGTTTTCTCGTTT 58.460 29.630 0.37 0.00 41.51 3.60
3330 3570 7.920682 AGCAAATGAACATTAAGTTTTCTCGTT 59.079 29.630 0.37 0.00 41.51 3.85
3331 3571 7.425606 AGCAAATGAACATTAAGTTTTCTCGT 58.574 30.769 0.37 0.00 41.51 4.18
3332 3572 7.858052 AGCAAATGAACATTAAGTTTTCTCG 57.142 32.000 0.37 0.00 41.51 4.04
3367 3607 4.221262 AGTGGTTAGTTCATTGCATGCAAT 59.779 37.500 34.78 34.78 46.35 3.56
3368 3608 3.573538 AGTGGTTAGTTCATTGCATGCAA 59.426 39.130 33.57 33.57 40.47 4.08
3369 3609 3.057386 CAGTGGTTAGTTCATTGCATGCA 60.057 43.478 18.46 18.46 0.00 3.96
3370 3610 3.504863 CAGTGGTTAGTTCATTGCATGC 58.495 45.455 11.82 11.82 0.00 4.06
3371 3611 3.504863 GCAGTGGTTAGTTCATTGCATG 58.495 45.455 6.68 0.00 44.01 4.06
3372 3612 3.855689 GCAGTGGTTAGTTCATTGCAT 57.144 42.857 6.68 0.00 44.01 3.96
3374 3614 3.057315 ACATGCAGTGGTTAGTTCATTGC 60.057 43.478 0.00 4.92 44.56 3.56
3375 3615 4.669965 CGACATGCAGTGGTTAGTTCATTG 60.670 45.833 0.00 0.00 0.00 2.82
3376 3616 3.436704 CGACATGCAGTGGTTAGTTCATT 59.563 43.478 0.00 0.00 0.00 2.57
3377 3617 3.002791 CGACATGCAGTGGTTAGTTCAT 58.997 45.455 0.00 0.00 0.00 2.57
3378 3618 2.224185 ACGACATGCAGTGGTTAGTTCA 60.224 45.455 0.00 0.00 35.47 3.18
3379 3619 2.157668 CACGACATGCAGTGGTTAGTTC 59.842 50.000 11.93 0.00 37.03 3.01
3380 3620 2.143122 CACGACATGCAGTGGTTAGTT 58.857 47.619 11.93 0.00 37.03 2.24
3381 3621 1.070134 ACACGACATGCAGTGGTTAGT 59.930 47.619 20.60 1.96 42.25 2.24
3382 3622 1.795768 ACACGACATGCAGTGGTTAG 58.204 50.000 20.60 1.38 42.25 2.34
3383 3623 2.248280 AACACGACATGCAGTGGTTA 57.752 45.000 20.60 0.00 42.25 2.85
3384 3624 1.388547 AAACACGACATGCAGTGGTT 58.611 45.000 20.60 18.36 42.73 3.67
3385 3625 0.662619 CAAACACGACATGCAGTGGT 59.337 50.000 20.60 14.15 42.25 4.16
3386 3626 0.943673 TCAAACACGACATGCAGTGG 59.056 50.000 20.60 7.50 42.25 4.00
3387 3627 2.975410 ATCAAACACGACATGCAGTG 57.025 45.000 16.62 16.62 43.46 3.66
3388 3628 3.664107 ACTATCAAACACGACATGCAGT 58.336 40.909 0.00 0.00 0.00 4.40
3389 3629 3.928992 AGACTATCAAACACGACATGCAG 59.071 43.478 0.00 0.00 0.00 4.41
3390 3630 3.925379 AGACTATCAAACACGACATGCA 58.075 40.909 0.00 0.00 0.00 3.96
3391 3631 3.926527 TGAGACTATCAAACACGACATGC 59.073 43.478 0.00 0.00 34.02 4.06
3402 3642 8.846943 TGCTTTTAATGACTTGAGACTATCAA 57.153 30.769 0.00 0.00 45.79 2.57
3403 3643 8.886719 CATGCTTTTAATGACTTGAGACTATCA 58.113 33.333 0.00 0.00 35.62 2.15
3404 3644 7.854916 GCATGCTTTTAATGACTTGAGACTATC 59.145 37.037 11.37 0.00 0.00 2.08
3405 3645 7.337689 TGCATGCTTTTAATGACTTGAGACTAT 59.662 33.333 20.33 0.00 0.00 2.12
3406 3646 6.654582 TGCATGCTTTTAATGACTTGAGACTA 59.345 34.615 20.33 0.00 0.00 2.59
3407 3647 5.474532 TGCATGCTTTTAATGACTTGAGACT 59.525 36.000 20.33 0.00 0.00 3.24
3408 3648 5.702865 TGCATGCTTTTAATGACTTGAGAC 58.297 37.500 20.33 0.00 0.00 3.36
3409 3649 5.963176 TGCATGCTTTTAATGACTTGAGA 57.037 34.783 20.33 0.00 0.00 3.27
3410 3650 6.694411 GGTATGCATGCTTTTAATGACTTGAG 59.306 38.462 20.33 0.00 0.00 3.02
3411 3651 6.405731 GGGTATGCATGCTTTTAATGACTTGA 60.406 38.462 20.33 0.00 0.00 3.02
3412 3652 5.750067 GGGTATGCATGCTTTTAATGACTTG 59.250 40.000 20.33 0.00 0.00 3.16
3413 3653 5.163416 GGGGTATGCATGCTTTTAATGACTT 60.163 40.000 20.33 0.00 0.00 3.01
3414 3654 4.342092 GGGGTATGCATGCTTTTAATGACT 59.658 41.667 20.33 0.00 0.00 3.41
3415 3655 4.099266 TGGGGTATGCATGCTTTTAATGAC 59.901 41.667 20.33 6.32 0.00 3.06
3416 3656 4.099266 GTGGGGTATGCATGCTTTTAATGA 59.901 41.667 20.33 0.00 0.00 2.57
3417 3657 4.141981 TGTGGGGTATGCATGCTTTTAATG 60.142 41.667 20.33 0.00 0.00 1.90
3418 3658 4.029520 TGTGGGGTATGCATGCTTTTAAT 58.970 39.130 20.33 5.95 0.00 1.40
3419 3659 3.435275 TGTGGGGTATGCATGCTTTTAA 58.565 40.909 20.33 0.00 0.00 1.52
3420 3660 3.093057 TGTGGGGTATGCATGCTTTTA 57.907 42.857 20.33 5.39 0.00 1.52
3421 3661 1.935799 TGTGGGGTATGCATGCTTTT 58.064 45.000 20.33 6.43 0.00 2.27
3422 3662 2.034124 GATGTGGGGTATGCATGCTTT 58.966 47.619 20.33 9.09 0.00 3.51
3423 3663 1.216175 AGATGTGGGGTATGCATGCTT 59.784 47.619 20.33 15.55 0.00 3.91
3424 3664 0.848735 AGATGTGGGGTATGCATGCT 59.151 50.000 20.33 7.07 0.00 3.79
3425 3665 1.202855 AGAGATGTGGGGTATGCATGC 60.203 52.381 11.82 11.82 0.00 4.06
3426 3666 2.945080 AGAGATGTGGGGTATGCATG 57.055 50.000 10.16 0.00 0.00 4.06
3427 3667 5.319453 CAATAAGAGATGTGGGGTATGCAT 58.681 41.667 3.79 3.79 0.00 3.96
3428 3668 4.446167 CCAATAAGAGATGTGGGGTATGCA 60.446 45.833 0.00 0.00 0.00 3.96
3429 3669 4.074970 CCAATAAGAGATGTGGGGTATGC 58.925 47.826 0.00 0.00 0.00 3.14
3430 3670 5.310409 ACCAATAAGAGATGTGGGGTATG 57.690 43.478 0.00 0.00 35.32 2.39
3431 3671 5.431731 TCAACCAATAAGAGATGTGGGGTAT 59.568 40.000 0.00 0.00 35.32 2.73
3432 3672 4.785914 TCAACCAATAAGAGATGTGGGGTA 59.214 41.667 0.00 0.00 35.32 3.69
3433 3673 3.591527 TCAACCAATAAGAGATGTGGGGT 59.408 43.478 0.00 0.00 35.32 4.95
3434 3674 3.947834 GTCAACCAATAAGAGATGTGGGG 59.052 47.826 0.00 0.00 35.32 4.96
3435 3675 4.588899 TGTCAACCAATAAGAGATGTGGG 58.411 43.478 0.00 0.00 35.32 4.61
3436 3676 5.649395 ACATGTCAACCAATAAGAGATGTGG 59.351 40.000 0.00 0.00 42.43 4.17
3437 3677 6.372381 TGACATGTCAACCAATAAGAGATGTG 59.628 38.462 26.02 0.00 43.55 3.21
3438 3678 6.475504 TGACATGTCAACCAATAAGAGATGT 58.524 36.000 26.02 4.41 45.37 3.06
3439 3679 6.990341 TGACATGTCAACCAATAAGAGATG 57.010 37.500 26.02 0.00 38.55 2.90
3440 3680 7.397221 TCTTGACATGTCAACCAATAAGAGAT 58.603 34.615 32.36 0.00 43.90 2.75
3441 3681 6.768483 TCTTGACATGTCAACCAATAAGAGA 58.232 36.000 32.36 22.62 43.90 3.10
3442 3682 7.439157 TTCTTGACATGTCAACCAATAAGAG 57.561 36.000 32.36 20.93 43.90 2.85
3443 3683 7.284261 TGTTTCTTGACATGTCAACCAATAAGA 59.716 33.333 32.36 23.89 43.90 2.10
3444 3684 7.424803 TGTTTCTTGACATGTCAACCAATAAG 58.575 34.615 32.36 22.21 43.90 1.73
3445 3685 7.340122 TGTTTCTTGACATGTCAACCAATAA 57.660 32.000 32.36 19.33 43.90 1.40
3446 3686 6.951062 TGTTTCTTGACATGTCAACCAATA 57.049 33.333 32.36 22.56 43.90 1.90
3447 3687 5.850557 TGTTTCTTGACATGTCAACCAAT 57.149 34.783 32.36 0.00 43.90 3.16
3448 3688 5.651387 TTGTTTCTTGACATGTCAACCAA 57.349 34.783 32.36 26.13 43.90 3.67
3449 3689 5.651387 TTTGTTTCTTGACATGTCAACCA 57.349 34.783 32.36 22.91 43.90 3.67
3450 3690 6.959671 TTTTTGTTTCTTGACATGTCAACC 57.040 33.333 32.36 21.04 43.90 3.77
3470 3710 7.325097 CGGTGCATTAAATTCTACTTCGTTTTT 59.675 33.333 0.00 0.00 0.00 1.94
3471 3711 6.799925 CGGTGCATTAAATTCTACTTCGTTTT 59.200 34.615 0.00 0.00 0.00 2.43
3472 3712 6.311723 CGGTGCATTAAATTCTACTTCGTTT 58.688 36.000 0.00 0.00 0.00 3.60
3473 3713 5.672819 GCGGTGCATTAAATTCTACTTCGTT 60.673 40.000 0.00 0.00 0.00 3.85
3474 3714 4.201783 GCGGTGCATTAAATTCTACTTCGT 60.202 41.667 0.00 0.00 0.00 3.85
3475 3715 4.271687 GCGGTGCATTAAATTCTACTTCG 58.728 43.478 0.00 0.00 0.00 3.79
3476 3716 4.271687 CGCGGTGCATTAAATTCTACTTC 58.728 43.478 0.00 0.00 0.00 3.01
3477 3717 3.486875 GCGCGGTGCATTAAATTCTACTT 60.487 43.478 8.83 0.00 45.45 2.24
3478 3718 2.031683 GCGCGGTGCATTAAATTCTACT 59.968 45.455 8.83 0.00 45.45 2.57
3479 3719 2.372350 GCGCGGTGCATTAAATTCTAC 58.628 47.619 8.83 0.00 45.45 2.59
3480 3720 2.748461 GCGCGGTGCATTAAATTCTA 57.252 45.000 8.83 0.00 45.45 2.10
3481 3721 3.622459 GCGCGGTGCATTAAATTCT 57.378 47.368 8.83 0.00 45.45 2.40
3491 3731 2.125202 AAAACACTTAGGCGCGGTGC 62.125 55.000 8.83 4.64 45.38 5.01
3492 3732 0.385473 CAAAACACTTAGGCGCGGTG 60.385 55.000 8.83 9.75 37.05 4.94
3493 3733 1.512156 CCAAAACACTTAGGCGCGGT 61.512 55.000 8.83 0.00 0.00 5.68
3494 3734 1.209127 CCAAAACACTTAGGCGCGG 59.791 57.895 8.83 0.00 0.00 6.46
3495 3735 1.209127 CCCAAAACACTTAGGCGCG 59.791 57.895 0.00 0.00 0.00 6.86
3496 3736 1.173913 ATCCCAAAACACTTAGGCGC 58.826 50.000 0.00 0.00 0.00 6.53
3497 3737 5.576447 AATAATCCCAAAACACTTAGGCG 57.424 39.130 0.00 0.00 0.00 5.52
3498 3738 6.106003 CCAAATAATCCCAAAACACTTAGGC 58.894 40.000 0.00 0.00 0.00 3.93
3499 3739 7.239763 ACCAAATAATCCCAAAACACTTAGG 57.760 36.000 0.00 0.00 0.00 2.69
3500 3740 9.554395 AAAACCAAATAATCCCAAAACACTTAG 57.446 29.630 0.00 0.00 0.00 2.18
3501 3741 9.549078 GAAAACCAAATAATCCCAAAACACTTA 57.451 29.630 0.00 0.00 0.00 2.24
3502 3742 7.225734 CGAAAACCAAATAATCCCAAAACACTT 59.774 33.333 0.00 0.00 0.00 3.16
3503 3743 6.704050 CGAAAACCAAATAATCCCAAAACACT 59.296 34.615 0.00 0.00 0.00 3.55
3504 3744 6.480651 ACGAAAACCAAATAATCCCAAAACAC 59.519 34.615 0.00 0.00 0.00 3.32
3505 3745 6.583562 ACGAAAACCAAATAATCCCAAAACA 58.416 32.000 0.00 0.00 0.00 2.83
3506 3746 8.590719 TTACGAAAACCAAATAATCCCAAAAC 57.409 30.769 0.00 0.00 0.00 2.43
3507 3747 7.873505 CCTTACGAAAACCAAATAATCCCAAAA 59.126 33.333 0.00 0.00 0.00 2.44
3508 3748 7.015389 ACCTTACGAAAACCAAATAATCCCAAA 59.985 33.333 0.00 0.00 0.00 3.28
3509 3749 6.494146 ACCTTACGAAAACCAAATAATCCCAA 59.506 34.615 0.00 0.00 0.00 4.12
3510 3750 6.011481 ACCTTACGAAAACCAAATAATCCCA 58.989 36.000 0.00 0.00 0.00 4.37
3511 3751 6.151480 TCACCTTACGAAAACCAAATAATCCC 59.849 38.462 0.00 0.00 0.00 3.85
3512 3752 7.025365 GTCACCTTACGAAAACCAAATAATCC 58.975 38.462 0.00 0.00 0.00 3.01
3513 3753 7.813645 AGTCACCTTACGAAAACCAAATAATC 58.186 34.615 0.00 0.00 0.00 1.75
3514 3754 7.754851 AGTCACCTTACGAAAACCAAATAAT 57.245 32.000 0.00 0.00 0.00 1.28
3515 3755 7.571080 AAGTCACCTTACGAAAACCAAATAA 57.429 32.000 0.00 0.00 0.00 1.40
3516 3756 8.086851 GTAAGTCACCTTACGAAAACCAAATA 57.913 34.615 0.00 0.00 42.56 1.40
3517 3757 6.962686 GTAAGTCACCTTACGAAAACCAAAT 58.037 36.000 0.00 0.00 42.56 2.32
3518 3758 6.362210 GTAAGTCACCTTACGAAAACCAAA 57.638 37.500 0.00 0.00 42.56 3.28
3519 3759 5.989551 GTAAGTCACCTTACGAAAACCAA 57.010 39.130 0.00 0.00 42.56 3.67
3533 3773 2.816087 TCCGTCTAGGTGTGTAAGTCAC 59.184 50.000 0.00 0.00 42.20 3.67
3534 3774 3.079578 CTCCGTCTAGGTGTGTAAGTCA 58.920 50.000 0.00 0.00 41.99 3.41
3535 3775 2.422832 CCTCCGTCTAGGTGTGTAAGTC 59.577 54.545 0.00 0.00 41.99 3.01
3536 3776 2.444421 CCTCCGTCTAGGTGTGTAAGT 58.556 52.381 0.00 0.00 41.99 2.24
3537 3777 1.749634 CCCTCCGTCTAGGTGTGTAAG 59.250 57.143 0.00 0.00 41.99 2.34
3538 3778 1.355381 TCCCTCCGTCTAGGTGTGTAA 59.645 52.381 0.00 0.00 41.99 2.41
3539 3779 0.994247 TCCCTCCGTCTAGGTGTGTA 59.006 55.000 0.00 0.00 41.99 2.90
3540 3780 0.323542 CTCCCTCCGTCTAGGTGTGT 60.324 60.000 0.00 0.00 41.99 3.72
3541 3781 0.323542 ACTCCCTCCGTCTAGGTGTG 60.324 60.000 0.00 0.00 41.99 3.82
3542 3782 1.064832 GTACTCCCTCCGTCTAGGTGT 60.065 57.143 0.00 0.00 41.99 4.16
3543 3783 1.677942 GTACTCCCTCCGTCTAGGTG 58.322 60.000 0.00 0.00 41.99 4.00
3544 3784 0.179936 CGTACTCCCTCCGTCTAGGT 59.820 60.000 0.00 0.00 41.99 3.08
3545 3785 0.467384 TCGTACTCCCTCCGTCTAGG 59.533 60.000 0.00 0.00 42.97 3.02
3546 3786 2.322355 TTCGTACTCCCTCCGTCTAG 57.678 55.000 0.00 0.00 0.00 2.43
3547 3787 2.787473 TTTCGTACTCCCTCCGTCTA 57.213 50.000 0.00 0.00 0.00 2.59
3548 3788 1.817447 CTTTTCGTACTCCCTCCGTCT 59.183 52.381 0.00 0.00 0.00 4.18
3549 3789 1.815003 TCTTTTCGTACTCCCTCCGTC 59.185 52.381 0.00 0.00 0.00 4.79
3550 3790 1.915141 TCTTTTCGTACTCCCTCCGT 58.085 50.000 0.00 0.00 0.00 4.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.