Multiple sequence alignment - TraesCS4A01G055300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G055300 chr4A 100.000 4789 0 0 1 4789 46218688 46223476 0.000000e+00 8844.0
1 TraesCS4A01G055300 chr4B 93.793 3754 159 27 808 4517 515063845 515060122 0.000000e+00 5574.0
2 TraesCS4A01G055300 chr4B 97.101 276 7 1 4515 4789 515060041 515059766 9.390000e-127 464.0
3 TraesCS4A01G055300 chr4D 92.030 2108 107 20 2713 4789 418580089 418578012 0.000000e+00 2905.0
4 TraesCS4A01G055300 chr4D 95.792 1521 51 6 900 2414 418585968 418584455 0.000000e+00 2442.0
5 TraesCS4A01G055300 chr5D 80.769 260 36 11 525 779 36749326 36749076 1.760000e-44 191.0
6 TraesCS4A01G055300 chr2D 79.216 255 30 12 526 771 602691079 602691319 6.420000e-34 156.0
7 TraesCS4A01G055300 chr6B 79.386 228 39 6 295 517 470814758 470814534 2.310000e-33 154.0
8 TraesCS4A01G055300 chr2B 78.761 226 43 4 295 517 4374955 4374732 3.860000e-31 147.0
9 TraesCS4A01G055300 chr2B 78.319 226 44 4 295 517 4012061 4011838 1.800000e-29 141.0
10 TraesCS4A01G055300 chr2B 78.319 226 44 4 295 517 4422800 4422577 1.800000e-29 141.0
11 TraesCS4A01G055300 chr1A 83.761 117 17 2 403 518 52964626 52964741 5.070000e-20 110.0
12 TraesCS4A01G055300 chr1A 74.783 230 52 4 292 518 582696540 582696314 1.100000e-16 99.0
13 TraesCS4A01G055300 chr3A 100.000 28 0 0 206 233 230974537 230974564 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G055300 chr4A 46218688 46223476 4788 False 8844 8844 100.000 1 4789 1 chr4A.!!$F1 4788
1 TraesCS4A01G055300 chr4B 515059766 515063845 4079 True 3019 5574 95.447 808 4789 2 chr4B.!!$R1 3981
2 TraesCS4A01G055300 chr4D 418578012 418580089 2077 True 2905 2905 92.030 2713 4789 1 chr4D.!!$R1 2076
3 TraesCS4A01G055300 chr4D 418584455 418585968 1513 True 2442 2442 95.792 900 2414 1 chr4D.!!$R2 1514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
386 387 0.030092 AAGCCCTACCCCTATGAGCA 60.030 55.0 0.00 0.0 0.00 4.26 F
444 445 0.039527 GACAAATTCACCACACGCCC 60.040 55.0 0.00 0.0 0.00 6.13 F
799 800 0.107945 TTTTGCAACACAGGGCCAAC 60.108 50.0 6.18 0.0 0.00 3.77 F
903 904 0.719015 TCCCCAATCCCTCTCTGAGT 59.281 55.0 4.32 0.0 0.00 3.41 F
2333 2349 0.846427 TTTGGGATCCTGCCTCCTGT 60.846 55.0 12.58 0.0 33.05 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2333 2349 0.109153 CCGATGAATCCAGGCCATCA 59.891 55.000 5.01 1.19 37.20 3.07 R
2334 2350 0.109342 ACCGATGAATCCAGGCCATC 59.891 55.000 5.01 0.00 34.81 3.51 R
2564 2582 1.314534 CCCATTCAGCAATGCCGACA 61.315 55.000 0.00 0.00 38.53 4.35 R
2699 2717 3.153919 GGGGACTAGCACAAATCAACAA 58.846 45.455 0.00 0.00 0.00 2.83 R
4083 4136 2.499693 TCTCTGCCGTGTGGATAATTCA 59.500 45.455 0.00 0.00 37.49 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.744559 GACCAAACCTCGCAAGCA 58.255 55.556 0.00 0.00 37.18 3.91
18 19 2.029743 GACCAAACCTCGCAAGCAA 58.970 52.632 0.00 0.00 37.18 3.91
19 20 0.040067 GACCAAACCTCGCAAGCAAG 60.040 55.000 0.00 0.00 37.18 4.01
20 21 1.286880 CCAAACCTCGCAAGCAAGG 59.713 57.895 0.00 0.00 37.37 3.61
21 22 1.172180 CCAAACCTCGCAAGCAAGGA 61.172 55.000 5.96 0.00 35.05 3.36
22 23 0.239347 CAAACCTCGCAAGCAAGGAG 59.761 55.000 5.96 0.00 35.05 3.69
23 24 1.518903 AAACCTCGCAAGCAAGGAGC 61.519 55.000 5.96 0.00 46.19 4.70
32 33 3.188786 GCAAGGAGCACGCTACGG 61.189 66.667 0.00 0.00 44.79 4.02
33 34 2.509336 CAAGGAGCACGCTACGGG 60.509 66.667 0.00 0.00 30.67 5.28
34 35 2.678934 AAGGAGCACGCTACGGGA 60.679 61.111 0.00 0.00 28.17 5.14
35 36 2.711922 AAGGAGCACGCTACGGGAG 61.712 63.158 0.00 0.00 28.17 4.30
61 62 4.101448 CCCTCTCGGCCAACCCAG 62.101 72.222 2.24 0.00 0.00 4.45
62 63 4.785453 CCTCTCGGCCAACCCAGC 62.785 72.222 2.24 0.00 0.00 4.85
63 64 4.020617 CTCTCGGCCAACCCAGCA 62.021 66.667 2.24 0.00 0.00 4.41
64 65 3.551496 CTCTCGGCCAACCCAGCAA 62.551 63.158 2.24 0.00 0.00 3.91
65 66 3.365265 CTCGGCCAACCCAGCAAC 61.365 66.667 2.24 0.00 0.00 4.17
66 67 3.850098 CTCGGCCAACCCAGCAACT 62.850 63.158 2.24 0.00 0.00 3.16
67 68 3.673484 CGGCCAACCCAGCAACTG 61.673 66.667 2.24 0.00 0.00 3.16
68 69 3.994853 GGCCAACCCAGCAACTGC 61.995 66.667 0.00 0.00 42.49 4.40
78 79 4.347453 GCAACTGCGCCCCACTTG 62.347 66.667 4.18 0.00 0.00 3.16
79 80 4.347453 CAACTGCGCCCCACTTGC 62.347 66.667 4.18 0.00 0.00 4.01
88 89 4.776322 CCCACTTGCCGATCGCCA 62.776 66.667 10.32 0.63 36.24 5.69
89 90 2.514592 CCACTTGCCGATCGCCAT 60.515 61.111 10.32 0.00 36.24 4.40
90 91 2.114670 CCACTTGCCGATCGCCATT 61.115 57.895 10.32 0.00 36.24 3.16
91 92 1.063006 CACTTGCCGATCGCCATTG 59.937 57.895 10.32 3.82 36.24 2.82
92 93 2.114670 ACTTGCCGATCGCCATTGG 61.115 57.895 10.32 0.00 36.67 3.16
93 94 1.819208 CTTGCCGATCGCCATTGGA 60.819 57.895 10.32 0.00 35.65 3.53
94 95 1.779025 CTTGCCGATCGCCATTGGAG 61.779 60.000 10.32 2.84 35.65 3.86
95 96 2.108976 GCCGATCGCCATTGGAGA 59.891 61.111 11.75 11.75 35.65 3.71
96 97 1.958205 GCCGATCGCCATTGGAGAG 60.958 63.158 14.63 2.90 35.65 3.20
97 98 1.301244 CCGATCGCCATTGGAGAGG 60.301 63.158 14.63 7.67 35.65 3.69
98 99 1.443407 CGATCGCCATTGGAGAGGT 59.557 57.895 14.63 0.00 34.53 3.85
99 100 0.179073 CGATCGCCATTGGAGAGGTT 60.179 55.000 14.63 0.00 34.53 3.50
100 101 1.743772 CGATCGCCATTGGAGAGGTTT 60.744 52.381 14.63 0.00 34.53 3.27
101 102 1.943340 GATCGCCATTGGAGAGGTTTC 59.057 52.381 14.63 3.93 34.53 2.78
102 103 0.690192 TCGCCATTGGAGAGGTTTCA 59.310 50.000 6.95 0.00 0.00 2.69
103 104 1.089920 CGCCATTGGAGAGGTTTCAG 58.910 55.000 6.95 0.00 0.00 3.02
104 105 1.339055 CGCCATTGGAGAGGTTTCAGA 60.339 52.381 6.95 0.00 0.00 3.27
105 106 2.681976 CGCCATTGGAGAGGTTTCAGAT 60.682 50.000 6.95 0.00 0.00 2.90
106 107 3.359950 GCCATTGGAGAGGTTTCAGATT 58.640 45.455 6.95 0.00 0.00 2.40
107 108 3.766051 GCCATTGGAGAGGTTTCAGATTT 59.234 43.478 6.95 0.00 0.00 2.17
108 109 4.381292 GCCATTGGAGAGGTTTCAGATTTG 60.381 45.833 6.95 0.00 0.00 2.32
109 110 4.159135 CCATTGGAGAGGTTTCAGATTTGG 59.841 45.833 0.00 0.00 0.00 3.28
110 111 2.795329 TGGAGAGGTTTCAGATTTGGC 58.205 47.619 0.00 0.00 0.00 4.52
111 112 2.095461 GGAGAGGTTTCAGATTTGGCC 58.905 52.381 0.00 0.00 0.00 5.36
112 113 2.291217 GGAGAGGTTTCAGATTTGGCCT 60.291 50.000 3.32 0.00 0.00 5.19
113 114 2.751806 GAGAGGTTTCAGATTTGGCCTG 59.248 50.000 3.32 0.00 0.00 4.85
114 115 1.203287 GAGGTTTCAGATTTGGCCTGC 59.797 52.381 3.32 0.00 0.00 4.85
115 116 0.247460 GGTTTCAGATTTGGCCTGCC 59.753 55.000 3.32 0.00 0.00 4.85
116 117 0.968405 GTTTCAGATTTGGCCTGCCA 59.032 50.000 6.80 6.80 45.63 4.92
117 118 1.551883 GTTTCAGATTTGGCCTGCCAT 59.448 47.619 12.40 0.00 46.64 4.40
118 119 2.760092 GTTTCAGATTTGGCCTGCCATA 59.240 45.455 12.40 7.81 46.64 2.74
119 120 3.317455 TTCAGATTTGGCCTGCCATAT 57.683 42.857 12.40 12.74 46.64 1.78
120 121 3.317455 TCAGATTTGGCCTGCCATATT 57.683 42.857 12.40 0.00 46.64 1.28
121 122 3.645434 TCAGATTTGGCCTGCCATATTT 58.355 40.909 12.40 5.28 46.64 1.40
122 123 4.802307 TCAGATTTGGCCTGCCATATTTA 58.198 39.130 12.40 0.00 46.64 1.40
123 124 5.207354 TCAGATTTGGCCTGCCATATTTAA 58.793 37.500 12.40 3.08 46.64 1.52
124 125 5.660417 TCAGATTTGGCCTGCCATATTTAAA 59.340 36.000 12.40 2.31 46.64 1.52
125 126 6.327104 TCAGATTTGGCCTGCCATATTTAAAT 59.673 34.615 12.40 7.42 46.64 1.40
126 127 6.993902 CAGATTTGGCCTGCCATATTTAAATT 59.006 34.615 12.40 0.00 46.64 1.82
127 128 6.993902 AGATTTGGCCTGCCATATTTAAATTG 59.006 34.615 12.40 4.95 46.64 2.32
128 129 4.686191 TGGCCTGCCATATTTAAATTGG 57.314 40.909 6.80 17.91 41.89 3.16
129 130 4.293494 TGGCCTGCCATATTTAAATTGGA 58.707 39.130 22.83 12.77 41.89 3.53
130 131 4.344679 TGGCCTGCCATATTTAAATTGGAG 59.655 41.667 22.83 17.82 41.89 3.86
131 132 4.262592 GGCCTGCCATATTTAAATTGGAGG 60.263 45.833 22.83 22.77 34.04 4.30
132 133 4.262592 GCCTGCCATATTTAAATTGGAGGG 60.263 45.833 22.83 21.54 32.74 4.30
133 134 5.147032 CCTGCCATATTTAAATTGGAGGGA 58.853 41.667 22.83 13.70 31.94 4.20
134 135 5.244626 CCTGCCATATTTAAATTGGAGGGAG 59.755 44.000 22.83 19.27 33.74 4.30
135 136 5.776358 TGCCATATTTAAATTGGAGGGAGT 58.224 37.500 22.83 0.00 31.94 3.85
136 137 6.916909 TGCCATATTTAAATTGGAGGGAGTA 58.083 36.000 22.83 0.00 31.94 2.59
137 138 6.775629 TGCCATATTTAAATTGGAGGGAGTAC 59.224 38.462 22.83 10.37 31.94 2.73
138 139 6.208797 GCCATATTTAAATTGGAGGGAGTACC 59.791 42.308 22.83 0.00 40.67 3.34
139 140 7.294584 CCATATTTAAATTGGAGGGAGTACCA 58.705 38.462 17.58 0.00 43.89 3.25
141 142 9.196139 CATATTTAAATTGGAGGGAGTACCAAA 57.804 33.333 5.91 0.00 46.87 3.28
142 143 6.904463 TTTAAATTGGAGGGAGTACCAAAC 57.096 37.500 0.00 0.00 46.87 2.93
143 144 2.781681 ATTGGAGGGAGTACCAAACG 57.218 50.000 0.00 0.00 46.87 3.60
144 145 1.426751 TTGGAGGGAGTACCAAACGT 58.573 50.000 0.00 0.00 42.18 3.99
145 146 0.682852 TGGAGGGAGTACCAAACGTG 59.317 55.000 0.00 0.00 43.89 4.49
146 147 0.971386 GGAGGGAGTACCAAACGTGA 59.029 55.000 0.00 0.00 43.89 4.35
147 148 1.337541 GGAGGGAGTACCAAACGTGAC 60.338 57.143 0.00 0.00 43.89 3.67
148 149 1.342174 GAGGGAGTACCAAACGTGACA 59.658 52.381 0.00 0.00 43.89 3.58
149 150 1.975680 AGGGAGTACCAAACGTGACAT 59.024 47.619 0.00 0.00 43.89 3.06
150 151 2.073816 GGGAGTACCAAACGTGACATG 58.926 52.381 0.00 0.00 39.85 3.21
151 152 1.463444 GGAGTACCAAACGTGACATGC 59.537 52.381 0.00 0.00 35.97 4.06
152 153 2.139917 GAGTACCAAACGTGACATGCA 58.860 47.619 0.00 0.00 0.00 3.96
153 154 2.742053 GAGTACCAAACGTGACATGCAT 59.258 45.455 0.00 0.00 0.00 3.96
154 155 3.146066 AGTACCAAACGTGACATGCATT 58.854 40.909 0.00 0.00 0.00 3.56
155 156 4.320023 AGTACCAAACGTGACATGCATTA 58.680 39.130 0.00 0.00 0.00 1.90
156 157 3.552604 ACCAAACGTGACATGCATTAC 57.447 42.857 0.00 0.00 0.00 1.89
157 158 2.881513 ACCAAACGTGACATGCATTACA 59.118 40.909 0.00 0.00 0.00 2.41
158 159 3.233578 CCAAACGTGACATGCATTACAC 58.766 45.455 17.80 17.80 0.00 2.90
159 160 3.304324 CCAAACGTGACATGCATTACACA 60.304 43.478 23.63 9.66 33.56 3.72
160 161 4.475028 CAAACGTGACATGCATTACACAT 58.525 39.130 23.63 12.56 33.56 3.21
161 162 5.391416 CCAAACGTGACATGCATTACACATA 60.391 40.000 23.63 0.00 33.56 2.29
162 163 4.857871 ACGTGACATGCATTACACATAC 57.142 40.909 23.63 7.14 33.56 2.39
163 164 4.249661 ACGTGACATGCATTACACATACA 58.750 39.130 23.63 4.96 33.56 2.29
164 165 4.693095 ACGTGACATGCATTACACATACAA 59.307 37.500 23.63 0.00 33.56 2.41
165 166 5.021389 CGTGACATGCATTACACATACAAC 58.979 41.667 23.63 4.87 33.56 3.32
166 167 5.390356 CGTGACATGCATTACACATACAACA 60.390 40.000 23.63 1.40 33.56 3.33
167 168 6.554419 GTGACATGCATTACACATACAACAT 58.446 36.000 20.98 0.00 34.05 2.71
168 169 6.469915 GTGACATGCATTACACATACAACATG 59.530 38.462 20.98 0.00 39.55 3.21
169 170 5.893687 ACATGCATTACACATACAACATGG 58.106 37.500 0.00 0.00 38.33 3.66
170 171 5.651576 ACATGCATTACACATACAACATGGA 59.348 36.000 0.00 0.00 38.33 3.41
171 172 5.816449 TGCATTACACATACAACATGGAG 57.184 39.130 0.00 0.00 0.00 3.86
172 173 4.639755 TGCATTACACATACAACATGGAGG 59.360 41.667 0.00 0.00 0.00 4.30
173 174 4.036734 GCATTACACATACAACATGGAGGG 59.963 45.833 0.00 0.00 0.00 4.30
174 175 2.806945 ACACATACAACATGGAGGGG 57.193 50.000 0.00 0.00 0.00 4.79
175 176 1.992557 ACACATACAACATGGAGGGGT 59.007 47.619 0.00 0.00 0.00 4.95
176 177 2.378547 ACACATACAACATGGAGGGGTT 59.621 45.455 0.00 0.00 0.00 4.11
177 178 3.181423 ACACATACAACATGGAGGGGTTT 60.181 43.478 0.00 0.00 0.00 3.27
178 179 3.831911 CACATACAACATGGAGGGGTTTT 59.168 43.478 0.00 0.00 0.00 2.43
179 180 4.283212 CACATACAACATGGAGGGGTTTTT 59.717 41.667 0.00 0.00 0.00 1.94
180 181 4.283212 ACATACAACATGGAGGGGTTTTTG 59.717 41.667 0.00 0.00 0.00 2.44
181 182 3.039252 ACAACATGGAGGGGTTTTTGA 57.961 42.857 0.00 0.00 0.00 2.69
182 183 2.965147 ACAACATGGAGGGGTTTTTGAG 59.035 45.455 0.00 0.00 0.00 3.02
183 184 3.230134 CAACATGGAGGGGTTTTTGAGA 58.770 45.455 0.00 0.00 0.00 3.27
184 185 3.160679 ACATGGAGGGGTTTTTGAGAG 57.839 47.619 0.00 0.00 0.00 3.20
185 186 2.716424 ACATGGAGGGGTTTTTGAGAGA 59.284 45.455 0.00 0.00 0.00 3.10
186 187 3.140144 ACATGGAGGGGTTTTTGAGAGAA 59.860 43.478 0.00 0.00 0.00 2.87
187 188 3.508845 TGGAGGGGTTTTTGAGAGAAG 57.491 47.619 0.00 0.00 0.00 2.85
188 189 2.783510 TGGAGGGGTTTTTGAGAGAAGT 59.216 45.455 0.00 0.00 0.00 3.01
189 190 3.149981 GGAGGGGTTTTTGAGAGAAGTG 58.850 50.000 0.00 0.00 0.00 3.16
190 191 2.554462 GAGGGGTTTTTGAGAGAAGTGC 59.446 50.000 0.00 0.00 0.00 4.40
191 192 2.175715 AGGGGTTTTTGAGAGAAGTGCT 59.824 45.455 0.00 0.00 0.00 4.40
192 193 2.554462 GGGGTTTTTGAGAGAAGTGCTC 59.446 50.000 0.00 0.00 44.29 4.26
207 208 8.324163 GAGAAGTGCTCTTATAAACAAAAGGA 57.676 34.615 0.04 0.00 40.61 3.36
208 209 8.691661 AGAAGTGCTCTTATAAACAAAAGGAA 57.308 30.769 0.04 0.00 33.64 3.36
209 210 9.131791 AGAAGTGCTCTTATAAACAAAAGGAAA 57.868 29.630 0.04 0.00 33.64 3.13
210 211 9.744468 GAAGTGCTCTTATAAACAAAAGGAAAA 57.256 29.630 0.04 0.00 33.64 2.29
212 213 9.696917 AGTGCTCTTATAAACAAAAGGAAAATG 57.303 29.630 0.00 0.00 0.00 2.32
213 214 8.435430 GTGCTCTTATAAACAAAAGGAAAATGC 58.565 33.333 0.00 0.00 0.00 3.56
214 215 8.367156 TGCTCTTATAAACAAAAGGAAAATGCT 58.633 29.630 0.00 0.00 0.00 3.79
215 216 9.208022 GCTCTTATAAACAAAAGGAAAATGCTT 57.792 29.630 0.00 0.00 0.00 3.91
217 218 9.487790 TCTTATAAACAAAAGGAAAATGCTTGG 57.512 29.630 0.00 0.00 0.00 3.61
218 219 4.898829 AAACAAAAGGAAAATGCTTGGC 57.101 36.364 0.00 0.00 0.00 4.52
219 220 3.843893 ACAAAAGGAAAATGCTTGGCT 57.156 38.095 0.00 0.00 0.00 4.75
220 221 4.155063 ACAAAAGGAAAATGCTTGGCTT 57.845 36.364 0.00 0.00 0.00 4.35
221 222 4.129380 ACAAAAGGAAAATGCTTGGCTTC 58.871 39.130 0.00 0.00 0.00 3.86
222 223 4.128643 CAAAAGGAAAATGCTTGGCTTCA 58.871 39.130 0.00 0.00 0.00 3.02
223 224 3.672767 AAGGAAAATGCTTGGCTTCAG 57.327 42.857 0.00 0.00 0.00 3.02
224 225 1.274447 AGGAAAATGCTTGGCTTCAGC 59.726 47.619 0.00 0.00 41.14 4.26
225 226 1.274447 GGAAAATGCTTGGCTTCAGCT 59.726 47.619 0.00 0.00 41.70 4.24
226 227 2.334838 GAAAATGCTTGGCTTCAGCTG 58.665 47.619 7.63 7.63 41.70 4.24
227 228 0.606604 AAATGCTTGGCTTCAGCTGG 59.393 50.000 15.13 0.00 41.70 4.85
228 229 1.885163 AATGCTTGGCTTCAGCTGGC 61.885 55.000 15.13 10.32 41.70 4.85
229 230 4.112341 GCTTGGCTTCAGCTGGCG 62.112 66.667 15.13 6.33 41.70 5.69
230 231 3.437795 CTTGGCTTCAGCTGGCGG 61.438 66.667 15.13 5.53 41.70 6.13
231 232 3.907260 CTTGGCTTCAGCTGGCGGA 62.907 63.158 15.13 1.63 41.70 5.54
232 233 3.272364 TTGGCTTCAGCTGGCGGAT 62.272 57.895 15.13 0.00 41.70 4.18
233 234 2.439156 GGCTTCAGCTGGCGGATT 60.439 61.111 15.13 0.00 41.70 3.01
234 235 2.768492 GGCTTCAGCTGGCGGATTG 61.768 63.158 15.13 0.00 41.70 2.67
235 236 2.042831 GCTTCAGCTGGCGGATTGT 61.043 57.895 15.13 0.00 38.21 2.71
236 237 0.744414 GCTTCAGCTGGCGGATTGTA 60.744 55.000 15.13 0.00 38.21 2.41
237 238 1.009829 CTTCAGCTGGCGGATTGTAC 58.990 55.000 15.13 0.00 0.00 2.90
238 239 0.739462 TTCAGCTGGCGGATTGTACG 60.739 55.000 15.13 0.00 0.00 3.67
246 247 3.806257 CGGATTGTACGCAAGCATC 57.194 52.632 0.00 0.00 42.30 3.91
247 248 0.304705 CGGATTGTACGCAAGCATCC 59.695 55.000 0.00 0.00 42.30 3.51
248 249 1.378531 GGATTGTACGCAAGCATCCA 58.621 50.000 4.12 0.00 42.30 3.41
249 250 1.064060 GGATTGTACGCAAGCATCCAC 59.936 52.381 4.12 0.00 42.30 4.02
250 251 1.064060 GATTGTACGCAAGCATCCACC 59.936 52.381 0.00 0.00 40.42 4.61
251 252 0.250510 TTGTACGCAAGCATCCACCA 60.251 50.000 0.00 0.00 45.62 4.17
252 253 0.035534 TGTACGCAAGCATCCACCAT 60.036 50.000 0.00 0.00 45.62 3.55
253 254 0.657840 GTACGCAAGCATCCACCATC 59.342 55.000 0.00 0.00 45.62 3.51
254 255 0.541392 TACGCAAGCATCCACCATCT 59.459 50.000 0.00 0.00 45.62 2.90
255 256 0.745845 ACGCAAGCATCCACCATCTC 60.746 55.000 0.00 0.00 45.62 2.75
256 257 0.463295 CGCAAGCATCCACCATCTCT 60.463 55.000 0.00 0.00 0.00 3.10
257 258 1.760192 GCAAGCATCCACCATCTCTT 58.240 50.000 0.00 0.00 0.00 2.85
258 259 1.674962 GCAAGCATCCACCATCTCTTC 59.325 52.381 0.00 0.00 0.00 2.87
259 260 2.295885 CAAGCATCCACCATCTCTTCC 58.704 52.381 0.00 0.00 0.00 3.46
260 261 1.588239 AGCATCCACCATCTCTTCCA 58.412 50.000 0.00 0.00 0.00 3.53
261 262 2.133520 AGCATCCACCATCTCTTCCAT 58.866 47.619 0.00 0.00 0.00 3.41
262 263 2.158652 AGCATCCACCATCTCTTCCATG 60.159 50.000 0.00 0.00 0.00 3.66
263 264 2.158711 GCATCCACCATCTCTTCCATGA 60.159 50.000 0.00 0.00 0.00 3.07
264 265 3.741249 CATCCACCATCTCTTCCATGAG 58.259 50.000 0.00 0.00 35.52 2.90
265 266 3.120468 TCCACCATCTCTTCCATGAGA 57.880 47.619 0.00 0.00 45.71 3.27
266 267 2.768527 TCCACCATCTCTTCCATGAGAC 59.231 50.000 0.00 0.00 44.64 3.36
267 268 2.482664 CCACCATCTCTTCCATGAGACG 60.483 54.545 0.00 0.00 44.64 4.18
268 269 1.137872 ACCATCTCTTCCATGAGACGC 59.862 52.381 0.00 0.00 44.64 5.19
269 270 1.485397 CATCTCTTCCATGAGACGCG 58.515 55.000 3.53 3.53 44.64 6.01
270 271 1.107114 ATCTCTTCCATGAGACGCGT 58.893 50.000 13.85 13.85 44.64 6.01
271 272 0.171231 TCTCTTCCATGAGACGCGTG 59.829 55.000 20.70 0.17 38.08 5.34
272 273 0.109086 CTCTTCCATGAGACGCGTGT 60.109 55.000 20.70 14.93 36.23 4.49
273 274 0.109272 TCTTCCATGAGACGCGTGTC 60.109 55.000 27.73 27.73 45.86 3.67
282 283 2.749541 GACGCGTGTCATTGATCCA 58.250 52.632 20.70 0.00 44.82 3.41
283 284 0.370273 GACGCGTGTCATTGATCCAC 59.630 55.000 20.70 0.00 44.82 4.02
284 285 0.037326 ACGCGTGTCATTGATCCACT 60.037 50.000 12.93 0.00 0.00 4.00
285 286 1.203758 ACGCGTGTCATTGATCCACTA 59.796 47.619 12.93 0.00 0.00 2.74
286 287 2.159099 ACGCGTGTCATTGATCCACTAT 60.159 45.455 12.93 0.00 0.00 2.12
287 288 3.067601 ACGCGTGTCATTGATCCACTATA 59.932 43.478 12.93 0.00 0.00 1.31
288 289 3.670523 CGCGTGTCATTGATCCACTATAG 59.329 47.826 0.00 0.00 0.00 1.31
289 290 4.621991 GCGTGTCATTGATCCACTATAGT 58.378 43.478 0.00 0.00 0.00 2.12
290 291 4.445718 GCGTGTCATTGATCCACTATAGTG 59.554 45.833 23.58 23.58 45.23 2.74
321 322 8.659925 TTTTTAGAACACGGTATAAACACAGA 57.340 30.769 0.00 0.00 0.00 3.41
322 323 7.642071 TTTAGAACACGGTATAAACACAGAC 57.358 36.000 0.00 0.00 0.00 3.51
323 324 4.232221 AGAACACGGTATAAACACAGACG 58.768 43.478 0.00 0.00 0.00 4.18
324 325 2.331194 ACACGGTATAAACACAGACGC 58.669 47.619 0.00 0.00 0.00 5.19
325 326 2.029649 ACACGGTATAAACACAGACGCT 60.030 45.455 0.00 0.00 0.00 5.07
326 327 2.597305 CACGGTATAAACACAGACGCTC 59.403 50.000 0.00 0.00 0.00 5.03
327 328 2.229543 ACGGTATAAACACAGACGCTCA 59.770 45.455 0.00 0.00 0.00 4.26
328 329 3.119245 ACGGTATAAACACAGACGCTCAT 60.119 43.478 0.00 0.00 0.00 2.90
329 330 4.096833 ACGGTATAAACACAGACGCTCATA 59.903 41.667 0.00 0.00 0.00 2.15
330 331 5.220381 CGGTATAAACACAGACGCTCATAT 58.780 41.667 0.00 0.00 0.00 1.78
331 332 6.016860 ACGGTATAAACACAGACGCTCATATA 60.017 38.462 0.00 0.00 0.00 0.86
332 333 7.027760 CGGTATAAACACAGACGCTCATATAT 58.972 38.462 0.00 0.00 0.00 0.86
333 334 8.179615 CGGTATAAACACAGACGCTCATATATA 58.820 37.037 0.00 0.00 0.00 0.86
334 335 9.286946 GGTATAAACACAGACGCTCATATATAC 57.713 37.037 0.00 0.00 0.00 1.47
335 336 9.836076 GTATAAACACAGACGCTCATATATACA 57.164 33.333 0.00 0.00 0.00 2.29
336 337 8.744008 ATAAACACAGACGCTCATATATACAC 57.256 34.615 0.00 0.00 0.00 2.90
337 338 4.784329 ACACAGACGCTCATATATACACG 58.216 43.478 0.00 0.00 0.00 4.49
338 339 3.604198 CACAGACGCTCATATATACACGC 59.396 47.826 0.00 0.00 0.00 5.34
339 340 3.252458 ACAGACGCTCATATATACACGCA 59.748 43.478 0.00 0.00 0.00 5.24
340 341 4.082733 ACAGACGCTCATATATACACGCAT 60.083 41.667 0.00 0.00 0.00 4.73
341 342 5.123344 ACAGACGCTCATATATACACGCATA 59.877 40.000 0.00 0.00 0.00 3.14
342 343 6.183360 ACAGACGCTCATATATACACGCATAT 60.183 38.462 0.00 0.00 0.00 1.78
343 344 7.012044 ACAGACGCTCATATATACACGCATATA 59.988 37.037 0.00 0.00 0.00 0.86
344 345 8.017946 CAGACGCTCATATATACACGCATATAT 58.982 37.037 4.85 4.85 35.40 0.86
345 346 8.568794 AGACGCTCATATATACACGCATATATT 58.431 33.333 4.79 0.00 33.63 1.28
346 347 8.729529 ACGCTCATATATACACGCATATATTC 57.270 34.615 4.79 0.00 33.63 1.75
347 348 8.349983 ACGCTCATATATACACGCATATATTCA 58.650 33.333 4.79 0.00 33.63 2.57
348 349 9.346725 CGCTCATATATACACGCATATATTCAT 57.653 33.333 4.79 0.00 33.63 2.57
367 368 6.976636 TTCATCTTTATGAACACATACGCA 57.023 33.333 0.00 0.00 45.17 5.24
368 369 6.976636 TCATCTTTATGAACACATACGCAA 57.023 33.333 0.00 0.00 39.20 4.85
369 370 7.003939 TCATCTTTATGAACACATACGCAAG 57.996 36.000 0.00 0.00 39.20 4.01
370 371 5.216566 TCTTTATGAACACATACGCAAGC 57.783 39.130 0.00 0.00 45.62 4.01
371 372 4.094294 TCTTTATGAACACATACGCAAGCC 59.906 41.667 0.00 0.00 45.62 4.35
372 373 1.094785 ATGAACACATACGCAAGCCC 58.905 50.000 0.00 0.00 45.62 5.19
373 374 0.036164 TGAACACATACGCAAGCCCT 59.964 50.000 0.00 0.00 45.62 5.19
374 375 1.276705 TGAACACATACGCAAGCCCTA 59.723 47.619 0.00 0.00 45.62 3.53
375 376 1.664151 GAACACATACGCAAGCCCTAC 59.336 52.381 0.00 0.00 45.62 3.18
376 377 0.107848 ACACATACGCAAGCCCTACC 60.108 55.000 0.00 0.00 45.62 3.18
377 378 0.814010 CACATACGCAAGCCCTACCC 60.814 60.000 0.00 0.00 45.62 3.69
378 379 1.227853 CATACGCAAGCCCTACCCC 60.228 63.158 0.00 0.00 45.62 4.95
379 380 1.384082 ATACGCAAGCCCTACCCCT 60.384 57.895 0.00 0.00 45.62 4.79
380 381 0.105349 ATACGCAAGCCCTACCCCTA 60.105 55.000 0.00 0.00 45.62 3.53
381 382 0.105349 TACGCAAGCCCTACCCCTAT 60.105 55.000 0.00 0.00 45.62 2.57
382 383 1.071471 CGCAAGCCCTACCCCTATG 59.929 63.158 0.00 0.00 0.00 2.23
383 384 1.407656 CGCAAGCCCTACCCCTATGA 61.408 60.000 0.00 0.00 0.00 2.15
384 385 0.398318 GCAAGCCCTACCCCTATGAG 59.602 60.000 0.00 0.00 0.00 2.90
385 386 0.398318 CAAGCCCTACCCCTATGAGC 59.602 60.000 0.00 0.00 0.00 4.26
386 387 0.030092 AAGCCCTACCCCTATGAGCA 60.030 55.000 0.00 0.00 0.00 4.26
387 388 0.764752 AGCCCTACCCCTATGAGCAC 60.765 60.000 0.00 0.00 0.00 4.40
388 389 1.054406 GCCCTACCCCTATGAGCACA 61.054 60.000 0.00 0.00 0.00 4.57
389 390 1.734655 CCCTACCCCTATGAGCACAT 58.265 55.000 1.31 1.31 40.16 3.21
390 391 1.625818 CCCTACCCCTATGAGCACATC 59.374 57.143 0.00 0.00 37.87 3.06
391 392 1.625818 CCTACCCCTATGAGCACATCC 59.374 57.143 0.00 0.00 37.87 3.51
392 393 1.273606 CTACCCCTATGAGCACATCCG 59.726 57.143 0.00 0.00 37.87 4.18
393 394 0.398522 ACCCCTATGAGCACATCCGA 60.399 55.000 0.00 0.00 37.87 4.55
394 395 0.319728 CCCCTATGAGCACATCCGAG 59.680 60.000 0.00 0.00 37.87 4.63
395 396 1.332195 CCCTATGAGCACATCCGAGA 58.668 55.000 0.00 0.00 37.87 4.04
396 397 1.688735 CCCTATGAGCACATCCGAGAA 59.311 52.381 0.00 0.00 37.87 2.87
397 398 2.103094 CCCTATGAGCACATCCGAGAAA 59.897 50.000 0.00 0.00 37.87 2.52
398 399 3.432186 CCCTATGAGCACATCCGAGAAAA 60.432 47.826 0.00 0.00 37.87 2.29
399 400 3.557595 CCTATGAGCACATCCGAGAAAAC 59.442 47.826 0.00 0.00 37.87 2.43
400 401 2.839486 TGAGCACATCCGAGAAAACT 57.161 45.000 0.00 0.00 0.00 2.66
401 402 3.953712 TGAGCACATCCGAGAAAACTA 57.046 42.857 0.00 0.00 0.00 2.24
402 403 4.265904 TGAGCACATCCGAGAAAACTAA 57.734 40.909 0.00 0.00 0.00 2.24
403 404 4.245660 TGAGCACATCCGAGAAAACTAAG 58.754 43.478 0.00 0.00 0.00 2.18
404 405 3.003480 AGCACATCCGAGAAAACTAAGC 58.997 45.455 0.00 0.00 0.00 3.09
405 406 2.096013 GCACATCCGAGAAAACTAAGCC 59.904 50.000 0.00 0.00 0.00 4.35
406 407 2.348666 CACATCCGAGAAAACTAAGCCG 59.651 50.000 0.00 0.00 0.00 5.52
407 408 2.232941 ACATCCGAGAAAACTAAGCCGA 59.767 45.455 0.00 0.00 0.00 5.54
408 409 2.358939 TCCGAGAAAACTAAGCCGAC 57.641 50.000 0.00 0.00 0.00 4.79
409 410 1.614903 TCCGAGAAAACTAAGCCGACA 59.385 47.619 0.00 0.00 0.00 4.35
410 411 2.232941 TCCGAGAAAACTAAGCCGACAT 59.767 45.455 0.00 0.00 0.00 3.06
411 412 3.444742 TCCGAGAAAACTAAGCCGACATA 59.555 43.478 0.00 0.00 0.00 2.29
412 413 4.098960 TCCGAGAAAACTAAGCCGACATAT 59.901 41.667 0.00 0.00 0.00 1.78
413 414 4.444720 CCGAGAAAACTAAGCCGACATATC 59.555 45.833 0.00 0.00 0.00 1.63
414 415 5.041287 CGAGAAAACTAAGCCGACATATCA 58.959 41.667 0.00 0.00 0.00 2.15
415 416 5.692204 CGAGAAAACTAAGCCGACATATCAT 59.308 40.000 0.00 0.00 0.00 2.45
416 417 6.129062 CGAGAAAACTAAGCCGACATATCATC 60.129 42.308 0.00 0.00 0.00 2.92
417 418 6.821388 AGAAAACTAAGCCGACATATCATCT 58.179 36.000 0.00 0.00 0.00 2.90
418 419 7.275920 AGAAAACTAAGCCGACATATCATCTT 58.724 34.615 0.00 0.00 0.00 2.40
419 420 6.851222 AAACTAAGCCGACATATCATCTTG 57.149 37.500 0.00 0.00 0.00 3.02
420 421 5.791336 ACTAAGCCGACATATCATCTTGA 57.209 39.130 0.00 0.00 0.00 3.02
421 422 6.161855 ACTAAGCCGACATATCATCTTGAA 57.838 37.500 0.00 0.00 0.00 2.69
422 423 6.582636 ACTAAGCCGACATATCATCTTGAAA 58.417 36.000 0.00 0.00 0.00 2.69
423 424 7.220030 ACTAAGCCGACATATCATCTTGAAAT 58.780 34.615 0.00 0.00 0.00 2.17
424 425 6.949352 AAGCCGACATATCATCTTGAAATT 57.051 33.333 0.00 0.00 0.00 1.82
425 426 6.309712 AGCCGACATATCATCTTGAAATTG 57.690 37.500 0.00 0.00 0.00 2.32
426 427 6.057533 AGCCGACATATCATCTTGAAATTGA 58.942 36.000 0.00 0.00 0.00 2.57
427 428 6.017605 AGCCGACATATCATCTTGAAATTGAC 60.018 38.462 0.00 0.00 0.00 3.18
428 429 6.238456 GCCGACATATCATCTTGAAATTGACA 60.238 38.462 0.00 0.00 0.00 3.58
429 430 7.679400 GCCGACATATCATCTTGAAATTGACAA 60.679 37.037 0.00 0.00 0.00 3.18
430 431 8.183536 CCGACATATCATCTTGAAATTGACAAA 58.816 33.333 0.00 0.00 0.00 2.83
431 432 9.726232 CGACATATCATCTTGAAATTGACAAAT 57.274 29.630 0.00 0.00 0.00 2.32
436 437 8.767478 ATCATCTTGAAATTGACAAATTCACC 57.233 30.769 16.47 0.00 34.84 4.02
437 438 7.724287 TCATCTTGAAATTGACAAATTCACCA 58.276 30.769 16.47 7.98 34.84 4.17
438 439 7.652909 TCATCTTGAAATTGACAAATTCACCAC 59.347 33.333 16.47 0.00 34.84 4.16
439 440 6.871844 TCTTGAAATTGACAAATTCACCACA 58.128 32.000 16.47 3.66 34.84 4.17
440 441 6.756074 TCTTGAAATTGACAAATTCACCACAC 59.244 34.615 16.47 0.00 34.84 3.82
441 442 5.039984 TGAAATTGACAAATTCACCACACG 58.960 37.500 13.49 0.00 34.84 4.49
442 443 2.483583 TTGACAAATTCACCACACGC 57.516 45.000 0.00 0.00 32.26 5.34
443 444 0.665835 TGACAAATTCACCACACGCC 59.334 50.000 0.00 0.00 0.00 5.68
444 445 0.039527 GACAAATTCACCACACGCCC 60.040 55.000 0.00 0.00 0.00 6.13
445 446 1.288752 CAAATTCACCACACGCCCC 59.711 57.895 0.00 0.00 0.00 5.80
446 447 1.152830 AAATTCACCACACGCCCCT 59.847 52.632 0.00 0.00 0.00 4.79
447 448 0.893727 AAATTCACCACACGCCCCTC 60.894 55.000 0.00 0.00 0.00 4.30
448 449 3.605749 ATTCACCACACGCCCCTCG 62.606 63.158 0.00 0.00 45.38 4.63
476 477 2.798680 CGAGAACGTCTATTCCCACTG 58.201 52.381 0.00 0.00 34.56 3.66
477 478 2.422479 CGAGAACGTCTATTCCCACTGA 59.578 50.000 0.00 0.00 34.56 3.41
478 479 3.119602 CGAGAACGTCTATTCCCACTGAA 60.120 47.826 0.00 0.00 34.39 3.02
479 480 4.174762 GAGAACGTCTATTCCCACTGAAC 58.825 47.826 0.00 0.00 35.31 3.18
480 481 3.576982 AGAACGTCTATTCCCACTGAACA 59.423 43.478 0.00 0.00 35.31 3.18
481 482 4.223032 AGAACGTCTATTCCCACTGAACAT 59.777 41.667 0.00 0.00 35.31 2.71
482 483 3.861840 ACGTCTATTCCCACTGAACATG 58.138 45.455 0.00 0.00 35.31 3.21
483 484 2.609459 CGTCTATTCCCACTGAACATGC 59.391 50.000 0.00 0.00 35.31 4.06
484 485 3.609853 GTCTATTCCCACTGAACATGCA 58.390 45.455 0.00 0.00 35.31 3.96
485 486 4.202441 GTCTATTCCCACTGAACATGCAT 58.798 43.478 0.00 0.00 35.31 3.96
486 487 4.274459 GTCTATTCCCACTGAACATGCATC 59.726 45.833 0.00 0.00 35.31 3.91
487 488 1.452110 TTCCCACTGAACATGCATCG 58.548 50.000 0.00 0.00 0.00 3.84
488 489 1.026182 TCCCACTGAACATGCATCGC 61.026 55.000 0.00 0.00 0.00 4.58
489 490 1.430632 CCACTGAACATGCATCGCC 59.569 57.895 0.00 0.00 0.00 5.54
490 491 1.061411 CACTGAACATGCATCGCCG 59.939 57.895 0.00 0.00 0.00 6.46
491 492 1.079197 ACTGAACATGCATCGCCGA 60.079 52.632 0.00 0.00 0.00 5.54
492 493 0.673333 ACTGAACATGCATCGCCGAA 60.673 50.000 0.00 0.00 0.00 4.30
493 494 0.447406 CTGAACATGCATCGCCGAAA 59.553 50.000 0.00 0.00 0.00 3.46
494 495 1.064505 CTGAACATGCATCGCCGAAAT 59.935 47.619 0.00 0.00 0.00 2.17
495 496 1.472082 TGAACATGCATCGCCGAAATT 59.528 42.857 0.00 0.00 0.00 1.82
496 497 2.094803 TGAACATGCATCGCCGAAATTT 60.095 40.909 0.00 0.00 0.00 1.82
497 498 2.652941 ACATGCATCGCCGAAATTTT 57.347 40.000 0.00 0.00 0.00 1.82
498 499 2.958213 ACATGCATCGCCGAAATTTTT 58.042 38.095 0.00 0.00 0.00 1.94
499 500 2.667481 ACATGCATCGCCGAAATTTTTG 59.333 40.909 0.00 0.00 0.00 2.44
500 501 2.713895 TGCATCGCCGAAATTTTTGA 57.286 40.000 0.00 0.00 0.00 2.69
501 502 3.018598 TGCATCGCCGAAATTTTTGAA 57.981 38.095 0.00 0.00 0.00 2.69
502 503 3.583806 TGCATCGCCGAAATTTTTGAAT 58.416 36.364 0.00 0.00 0.00 2.57
503 504 4.738124 TGCATCGCCGAAATTTTTGAATA 58.262 34.783 0.00 0.00 0.00 1.75
504 505 5.164233 TGCATCGCCGAAATTTTTGAATAA 58.836 33.333 0.00 0.00 0.00 1.40
505 506 5.635280 TGCATCGCCGAAATTTTTGAATAAA 59.365 32.000 0.00 0.00 0.00 1.40
506 507 6.312426 TGCATCGCCGAAATTTTTGAATAAAT 59.688 30.769 0.00 0.00 0.00 1.40
507 508 6.840789 GCATCGCCGAAATTTTTGAATAAATC 59.159 34.615 0.00 0.00 0.00 2.17
508 509 6.879188 TCGCCGAAATTTTTGAATAAATCC 57.121 33.333 0.00 0.00 0.00 3.01
509 510 6.390721 TCGCCGAAATTTTTGAATAAATCCA 58.609 32.000 0.00 0.00 0.00 3.41
510 511 6.529829 TCGCCGAAATTTTTGAATAAATCCAG 59.470 34.615 0.00 0.00 0.00 3.86
511 512 6.237808 CGCCGAAATTTTTGAATAAATCCAGG 60.238 38.462 0.00 0.00 0.00 4.45
512 513 6.816140 GCCGAAATTTTTGAATAAATCCAGGA 59.184 34.615 0.00 0.00 0.00 3.86
513 514 7.333174 GCCGAAATTTTTGAATAAATCCAGGAA 59.667 33.333 0.00 0.00 0.00 3.36
514 515 9.382275 CCGAAATTTTTGAATAAATCCAGGAAT 57.618 29.630 0.00 0.00 0.00 3.01
531 532 4.820894 GGAATAATCCCGGTGCTATAGT 57.179 45.455 0.00 0.00 40.10 2.12
532 533 4.504858 GGAATAATCCCGGTGCTATAGTG 58.495 47.826 0.00 0.00 40.10 2.74
533 534 4.222145 GGAATAATCCCGGTGCTATAGTGA 59.778 45.833 0.00 0.00 40.10 3.41
534 535 5.407407 AATAATCCCGGTGCTATAGTGAG 57.593 43.478 0.00 0.00 0.00 3.51
535 536 2.383442 ATCCCGGTGCTATAGTGAGT 57.617 50.000 0.00 0.00 0.00 3.41
536 537 3.520691 ATCCCGGTGCTATAGTGAGTA 57.479 47.619 0.00 0.00 0.00 2.59
537 538 3.520691 TCCCGGTGCTATAGTGAGTAT 57.479 47.619 0.00 0.00 0.00 2.12
538 539 3.840991 TCCCGGTGCTATAGTGAGTATT 58.159 45.455 0.00 0.00 0.00 1.89
539 540 4.220724 TCCCGGTGCTATAGTGAGTATTT 58.779 43.478 0.00 0.00 0.00 1.40
540 541 4.038763 TCCCGGTGCTATAGTGAGTATTTG 59.961 45.833 0.00 0.00 0.00 2.32
541 542 4.202223 CCCGGTGCTATAGTGAGTATTTGT 60.202 45.833 0.00 0.00 0.00 2.83
542 543 5.010314 CCCGGTGCTATAGTGAGTATTTGTA 59.990 44.000 0.00 0.00 0.00 2.41
543 544 6.295123 CCCGGTGCTATAGTGAGTATTTGTAT 60.295 42.308 0.00 0.00 0.00 2.29
544 545 6.807230 CCGGTGCTATAGTGAGTATTTGTATC 59.193 42.308 0.84 0.00 0.00 2.24
545 546 7.368059 CGGTGCTATAGTGAGTATTTGTATCA 58.632 38.462 0.84 0.00 0.00 2.15
546 547 7.865889 CGGTGCTATAGTGAGTATTTGTATCAA 59.134 37.037 0.84 0.00 0.00 2.57
547 548 9.712305 GGTGCTATAGTGAGTATTTGTATCAAT 57.288 33.333 0.84 0.00 0.00 2.57
555 556 9.507329 AGTGAGTATTTGTATCAATGTCTTTGT 57.493 29.630 0.00 0.00 36.65 2.83
558 559 8.970691 AGTATTTGTATCAATGTCTTTGTTGC 57.029 30.769 0.00 0.00 36.65 4.17
559 560 8.575589 AGTATTTGTATCAATGTCTTTGTTGCA 58.424 29.630 0.00 0.00 36.65 4.08
560 561 9.190858 GTATTTGTATCAATGTCTTTGTTGCAA 57.809 29.630 0.00 0.00 37.64 4.08
561 562 8.659925 ATTTGTATCAATGTCTTTGTTGCAAA 57.340 26.923 18.91 18.91 45.35 3.68
562 563 8.484641 TTTGTATCAATGTCTTTGTTGCAAAA 57.515 26.923 16.42 0.00 41.99 2.44
563 564 8.484641 TTGTATCAATGTCTTTGTTGCAAAAA 57.515 26.923 0.00 0.00 36.97 1.94
564 565 8.129161 TGTATCAATGTCTTTGTTGCAAAAAG 57.871 30.769 19.50 19.50 36.65 2.27
565 566 7.978414 TGTATCAATGTCTTTGTTGCAAAAAGA 59.022 29.630 22.10 22.10 40.46 2.52
566 567 6.890663 TCAATGTCTTTGTTGCAAAAAGAG 57.109 33.333 24.49 15.94 42.68 2.85
567 568 6.629128 TCAATGTCTTTGTTGCAAAAAGAGA 58.371 32.000 24.49 23.79 42.68 3.10
568 569 7.267128 TCAATGTCTTTGTTGCAAAAAGAGAT 58.733 30.769 24.49 24.49 44.83 2.75
569 570 7.223193 TCAATGTCTTTGTTGCAAAAAGAGATG 59.777 33.333 27.39 23.64 43.17 2.90
570 571 5.964758 TGTCTTTGTTGCAAAAAGAGATGT 58.035 33.333 24.49 0.00 42.68 3.06
571 572 7.094508 TGTCTTTGTTGCAAAAAGAGATGTA 57.905 32.000 24.49 13.37 42.68 2.29
572 573 7.542890 TGTCTTTGTTGCAAAAAGAGATGTAA 58.457 30.769 24.49 11.92 42.68 2.41
573 574 7.487829 TGTCTTTGTTGCAAAAAGAGATGTAAC 59.512 33.333 24.49 16.78 42.68 2.50
574 575 7.487829 GTCTTTGTTGCAAAAAGAGATGTAACA 59.512 33.333 24.49 5.52 45.90 2.41
577 578 7.094508 TGTTGCAAAAAGAGATGTAACAAGA 57.905 32.000 0.00 0.00 45.06 3.02
578 579 6.972328 TGTTGCAAAAAGAGATGTAACAAGAC 59.028 34.615 0.00 0.00 45.06 3.01
579 580 6.072112 TGCAAAAAGAGATGTAACAAGACC 57.928 37.500 0.00 0.00 0.00 3.85
580 581 5.827797 TGCAAAAAGAGATGTAACAAGACCT 59.172 36.000 0.00 0.00 0.00 3.85
581 582 6.321181 TGCAAAAAGAGATGTAACAAGACCTT 59.679 34.615 0.00 0.00 0.00 3.50
582 583 7.147915 TGCAAAAAGAGATGTAACAAGACCTTT 60.148 33.333 0.00 0.00 0.00 3.11
583 584 7.168135 GCAAAAAGAGATGTAACAAGACCTTTG 59.832 37.037 0.00 0.00 0.00 2.77
584 585 7.881775 AAAAGAGATGTAACAAGACCTTTGT 57.118 32.000 0.00 0.00 0.00 2.83
585 586 7.881775 AAAGAGATGTAACAAGACCTTTGTT 57.118 32.000 9.83 9.83 44.03 2.83
586 587 8.974060 AAAGAGATGTAACAAGACCTTTGTTA 57.026 30.769 8.06 8.06 42.10 2.41
587 588 8.974060 AAGAGATGTAACAAGACCTTTGTTAA 57.026 30.769 12.49 5.90 43.77 2.01
588 589 8.974060 AGAGATGTAACAAGACCTTTGTTAAA 57.026 30.769 12.49 8.98 43.77 1.52
589 590 9.403583 AGAGATGTAACAAGACCTTTGTTAAAA 57.596 29.630 12.49 6.51 43.77 1.52
627 628 9.653287 AAAATTACAACGAGATCTCTATTGTCA 57.347 29.630 30.43 24.40 37.57 3.58
628 629 9.653287 AAATTACAACGAGATCTCTATTGTCAA 57.347 29.630 30.43 24.19 37.57 3.18
629 630 9.653287 AATTACAACGAGATCTCTATTGTCAAA 57.347 29.630 30.43 23.91 37.57 2.69
630 631 9.653287 ATTACAACGAGATCTCTATTGTCAAAA 57.347 29.630 30.43 23.45 37.57 2.44
631 632 7.962964 ACAACGAGATCTCTATTGTCAAAAA 57.037 32.000 25.36 0.00 33.90 1.94
650 651 4.376340 AAAAACTGCAACAAGACCTCTG 57.624 40.909 0.00 0.00 0.00 3.35
651 652 2.717639 AACTGCAACAAGACCTCTGT 57.282 45.000 0.00 0.00 0.00 3.41
652 653 2.717639 ACTGCAACAAGACCTCTGTT 57.282 45.000 0.00 0.00 0.00 3.16
653 654 3.838244 ACTGCAACAAGACCTCTGTTA 57.162 42.857 0.00 0.00 0.00 2.41
654 655 3.467803 ACTGCAACAAGACCTCTGTTAC 58.532 45.455 0.00 0.00 0.00 2.50
655 656 3.118408 ACTGCAACAAGACCTCTGTTACA 60.118 43.478 0.00 0.00 0.00 2.41
656 657 3.876914 CTGCAACAAGACCTCTGTTACAA 59.123 43.478 0.00 0.00 0.00 2.41
657 658 4.265893 TGCAACAAGACCTCTGTTACAAA 58.734 39.130 0.00 0.00 0.00 2.83
658 659 4.702612 TGCAACAAGACCTCTGTTACAAAA 59.297 37.500 0.00 0.00 0.00 2.44
659 660 5.184096 TGCAACAAGACCTCTGTTACAAAAA 59.816 36.000 0.00 0.00 0.00 1.94
756 757 8.587952 ACCTATGTTGTAAAATTTTCTGCAAC 57.412 30.769 23.99 23.99 37.36 4.17
757 758 8.200792 ACCTATGTTGTAAAATTTTCTGCAACA 58.799 29.630 29.43 29.43 46.26 3.33
761 762 7.904094 TGTTGTAAAATTTTCTGCAACATGAC 58.096 30.769 26.73 15.46 40.46 3.06
762 763 7.763528 TGTTGTAAAATTTTCTGCAACATGACT 59.236 29.630 26.73 1.28 40.46 3.41
763 764 8.603181 GTTGTAAAATTTTCTGCAACATGACTT 58.397 29.630 24.88 0.00 36.97 3.01
764 765 9.809096 TTGTAAAATTTTCTGCAACATGACTTA 57.191 25.926 6.72 0.00 0.00 2.24
765 766 9.979578 TGTAAAATTTTCTGCAACATGACTTAT 57.020 25.926 6.72 0.00 0.00 1.73
797 798 2.290847 TTTTTGCAACACAGGGCCA 58.709 47.368 6.18 0.00 0.00 5.36
798 799 0.615331 TTTTTGCAACACAGGGCCAA 59.385 45.000 6.18 0.00 0.00 4.52
799 800 0.107945 TTTTGCAACACAGGGCCAAC 60.108 50.000 6.18 0.00 0.00 3.77
800 801 1.260538 TTTGCAACACAGGGCCAACA 61.261 50.000 6.18 0.00 0.00 3.33
801 802 1.260538 TTGCAACACAGGGCCAACAA 61.261 50.000 6.18 0.00 0.00 2.83
802 803 1.047596 TGCAACACAGGGCCAACAAT 61.048 50.000 6.18 0.00 0.00 2.71
803 804 0.965439 GCAACACAGGGCCAACAATA 59.035 50.000 6.18 0.00 0.00 1.90
804 805 1.067635 GCAACACAGGGCCAACAATAG 60.068 52.381 6.18 0.00 0.00 1.73
805 806 2.513753 CAACACAGGGCCAACAATAGA 58.486 47.619 6.18 0.00 0.00 1.98
806 807 2.890311 CAACACAGGGCCAACAATAGAA 59.110 45.455 6.18 0.00 0.00 2.10
807 808 2.795329 ACACAGGGCCAACAATAGAAG 58.205 47.619 6.18 0.00 0.00 2.85
808 809 2.094675 CACAGGGCCAACAATAGAAGG 58.905 52.381 6.18 0.00 0.00 3.46
809 810 1.710809 ACAGGGCCAACAATAGAAGGT 59.289 47.619 6.18 0.00 0.00 3.50
810 811 2.094675 CAGGGCCAACAATAGAAGGTG 58.905 52.381 6.18 0.00 0.00 4.00
811 812 1.992557 AGGGCCAACAATAGAAGGTGA 59.007 47.619 6.18 0.00 0.00 4.02
812 813 2.092323 GGGCCAACAATAGAAGGTGAC 58.908 52.381 4.39 0.00 0.00 3.67
813 814 1.737793 GGCCAACAATAGAAGGTGACG 59.262 52.381 0.00 0.00 0.00 4.35
814 815 1.130561 GCCAACAATAGAAGGTGACGC 59.869 52.381 0.00 0.00 0.00 5.19
815 816 2.699954 CCAACAATAGAAGGTGACGCT 58.300 47.619 0.00 0.00 0.00 5.07
816 817 2.673368 CCAACAATAGAAGGTGACGCTC 59.327 50.000 0.00 0.00 0.00 5.03
817 818 2.673368 CAACAATAGAAGGTGACGCTCC 59.327 50.000 0.00 0.00 0.00 4.70
818 819 1.899814 ACAATAGAAGGTGACGCTCCA 59.100 47.619 0.00 0.00 0.00 3.86
843 844 1.405463 TCAGTCAATCAGATCCGACCG 59.595 52.381 8.63 1.18 0.00 4.79
903 904 0.719015 TCCCCAATCCCTCTCTGAGT 59.281 55.000 4.32 0.00 0.00 3.41
905 906 1.577736 CCCAATCCCTCTCTGAGTGT 58.422 55.000 4.32 0.00 0.00 3.55
910 920 2.980246 TCCCTCTCTGAGTGTCTTCA 57.020 50.000 4.32 0.00 0.00 3.02
1076 1089 2.997315 TGGACACCGCCCTCTCAG 60.997 66.667 0.00 0.00 0.00 3.35
1099 1112 4.785453 GAACGCCCAGAGCCCCAG 62.785 72.222 0.00 0.00 38.78 4.45
1104 1117 3.086600 CCCAGAGCCCCAGTCCTC 61.087 72.222 0.00 0.00 0.00 3.71
1449 1462 1.444553 GGACGAGGTCAGCTTCACG 60.445 63.158 0.00 0.00 33.68 4.35
1656 1669 0.960861 CCTTCTTCCCGTTCAAGGCC 60.961 60.000 0.00 0.00 0.00 5.19
1662 1675 3.110178 CCGTTCAAGGCCGTCGAC 61.110 66.667 5.18 5.18 0.00 4.20
2019 2032 2.734276 AGCTTCTTCTCTCGGTGAAC 57.266 50.000 0.00 0.00 0.00 3.18
2055 2068 2.770259 GTTCGAGGCTTCGCGTTC 59.230 61.111 14.16 0.05 46.28 3.95
2088 2101 3.516615 GACGAGCTTGATAGGATATGCC 58.483 50.000 8.31 0.00 0.00 4.40
2150 2163 7.129109 TGATTGTTAACAGATTTTCTCCGAC 57.871 36.000 8.56 0.00 0.00 4.79
2333 2349 0.846427 TTTGGGATCCTGCCTCCTGT 60.846 55.000 12.58 0.00 33.05 4.00
2334 2350 1.565390 TTGGGATCCTGCCTCCTGTG 61.565 60.000 12.58 0.00 33.05 3.66
2504 2522 5.054390 TGAAATAATGGGAAACGAAGTGC 57.946 39.130 0.00 0.00 45.00 4.40
2537 2555 8.685838 TTAAATATGTAATCAGGGGTGCTAAC 57.314 34.615 0.00 0.00 0.00 2.34
2539 2557 4.862641 ATGTAATCAGGGGTGCTAACTT 57.137 40.909 0.00 0.00 0.00 2.66
2547 2565 2.171448 AGGGGTGCTAACTTATGCTCAG 59.829 50.000 0.00 0.00 0.00 3.35
2549 2567 3.134081 GGGGTGCTAACTTATGCTCAGTA 59.866 47.826 0.00 0.00 0.00 2.74
2554 2572 5.875359 GTGCTAACTTATGCTCAGTACCTTT 59.125 40.000 0.00 0.00 0.00 3.11
2564 2582 6.485830 TGCTCAGTACCTTTGCTAATATCT 57.514 37.500 0.00 0.00 0.00 1.98
2591 2609 2.128771 TTGCTGAATGGGGACTAAGC 57.871 50.000 0.00 0.00 0.00 3.09
2605 2623 6.882678 TGGGGACTAAGCAACTTAATTAAGTC 59.117 38.462 26.87 17.22 45.17 3.01
2625 2643 5.128919 AGTCTTTCTTGAAGTGCTCACAAT 58.871 37.500 2.63 0.00 36.70 2.71
2631 2649 4.883585 TCTTGAAGTGCTCACAATTGTCTT 59.116 37.500 8.48 8.62 33.46 3.01
2646 2664 7.914871 CACAATTGTCTTATGTTCAACAGTTCA 59.085 33.333 8.48 0.00 0.00 3.18
2649 2667 6.844696 TGTCTTATGTTCAACAGTTCAGTC 57.155 37.500 0.00 0.00 0.00 3.51
2671 2689 8.184192 CAGTCTTTGTTTAACTGACTCAAATGT 58.816 33.333 12.82 0.00 42.37 2.71
2684 2702 7.605691 ACTGACTCAAATGTCTCCAATTCTTAG 59.394 37.037 0.00 0.00 37.79 2.18
2692 2710 7.856145 ATGTCTCCAATTCTTAGCAGTAAAG 57.144 36.000 0.00 0.00 0.00 1.85
2696 2714 9.255304 GTCTCCAATTCTTAGCAGTAAAGATAG 57.745 37.037 0.00 0.00 33.17 2.08
2739 2757 5.936372 GTCCCCTTTTATACTTCACGTTTCT 59.064 40.000 0.00 0.00 0.00 2.52
2757 2775 5.006746 CGTTTCTAGACTTTCTGCTTTGTGT 59.993 40.000 0.00 0.00 0.00 3.72
2778 2796 3.503748 GTCATCCTTGTTTCCACAGGAAG 59.496 47.826 0.00 0.00 43.06 3.46
2784 2802 4.401925 CTTGTTTCCACAGGAAGATCCTT 58.598 43.478 0.00 0.00 46.91 3.36
2806 2824 2.717639 AACTGCTGTGTTCCTTCTGT 57.282 45.000 0.00 0.00 0.00 3.41
2838 2856 3.402628 AAGTTCGGCATGTGTTCTAGT 57.597 42.857 0.00 0.00 0.00 2.57
2867 2885 5.818678 TGTGTATAAAGTTGGAGAGTGGT 57.181 39.130 0.00 0.00 0.00 4.16
2888 2906 5.594725 TGGTTGGTTCTATAACTTGCAAACA 59.405 36.000 0.00 0.00 32.81 2.83
2917 2935 3.055819 TGAATACTCTGGACCTGTTGAGC 60.056 47.826 0.00 0.00 0.00 4.26
2934 2952 0.322975 AGCTTCCACACAGCTACAGG 59.677 55.000 0.00 0.00 46.18 4.00
2940 2958 2.969950 TCCACACAGCTACAGGTACTTT 59.030 45.455 0.00 0.00 34.60 2.66
2999 3017 5.119931 AGAGTAAATAGATCTGCAGCTCG 57.880 43.478 9.47 0.00 0.00 5.03
3014 3032 2.802247 CAGCTCGTTGAATGTCAAGACA 59.198 45.455 5.24 5.24 46.44 3.41
3029 3047 6.047870 TGTCAAGACAACCATCAAAATTTGG 58.952 36.000 5.83 0.00 38.56 3.28
3043 3061 9.405587 CATCAAAATTTGGTGTAACGTAGAAAT 57.594 29.630 10.62 0.00 37.01 2.17
3067 3109 9.976511 AATTTTCTGGCTATATGTGATTTGATG 57.023 29.630 0.00 0.00 0.00 3.07
3068 3110 8.750515 TTTTCTGGCTATATGTGATTTGATGA 57.249 30.769 0.00 0.00 0.00 2.92
3272 3315 8.363390 CAGATTAGCCTGACAATAAGACATCTA 58.637 37.037 0.00 0.00 36.29 1.98
3302 3353 0.036952 ATCACACACTTCTCCAGCCG 60.037 55.000 0.00 0.00 0.00 5.52
3341 3392 7.572523 TTTCTGGATATGAACATGTCATTCC 57.427 36.000 13.57 16.76 45.13 3.01
3377 3428 6.113411 GCTGTATAGTTTGTGGAACCACTAT 58.887 40.000 21.98 14.31 46.30 2.12
3499 3550 6.905544 TTTTGTCATTACGTGTGTGAGTAA 57.094 33.333 0.00 0.00 37.26 2.24
3510 3563 7.117241 ACGTGTGTGAGTAAAATCATGTAAG 57.883 36.000 0.00 0.00 0.00 2.34
3511 3564 6.926826 ACGTGTGTGAGTAAAATCATGTAAGA 59.073 34.615 0.00 0.00 0.00 2.10
3512 3565 7.602644 ACGTGTGTGAGTAAAATCATGTAAGAT 59.397 33.333 0.00 0.00 0.00 2.40
3513 3566 9.083080 CGTGTGTGAGTAAAATCATGTAAGATA 57.917 33.333 0.00 0.00 0.00 1.98
3667 3720 8.168681 ACTGTAAACTTTCATTTTGTTCAACG 57.831 30.769 0.00 0.00 0.00 4.10
3739 3792 2.036256 GCCTGGTGGGAATGCTGT 59.964 61.111 0.00 0.00 37.23 4.40
3800 3853 3.630312 TCCGGCATTAAAAGGTAAGCATC 59.370 43.478 0.00 0.00 0.00 3.91
3807 3860 6.678900 GCATTAAAAGGTAAGCATCTGAGGTG 60.679 42.308 0.00 0.00 0.00 4.00
3912 3965 5.596836 TCTGTTTCATAATTTCCATGGGC 57.403 39.130 13.02 0.00 0.00 5.36
3920 3973 0.037419 ATTTCCATGGGCGTGCAAAC 60.037 50.000 13.02 0.00 0.00 2.93
4019 4072 5.321927 AGAGGGGAAATGTTATCAAACGTT 58.678 37.500 0.00 0.00 44.83 3.99
4074 4127 7.531857 TTGTTGAGCTTGGATGGTAAAATTA 57.468 32.000 0.00 0.00 0.00 1.40
4096 4149 8.732746 ATTACCACTTACTGAATTATCCACAC 57.267 34.615 0.00 0.00 0.00 3.82
4098 4151 4.570772 CCACTTACTGAATTATCCACACGG 59.429 45.833 0.00 0.00 0.00 4.94
4108 4161 0.687354 ATCCACACGGCAGAGAAACT 59.313 50.000 0.00 0.00 0.00 2.66
4237 4291 4.281182 TGTTCTCTCTTACCACTGGAGTTC 59.719 45.833 0.71 0.00 0.00 3.01
4295 4350 8.414778 AGGTCACTAGCTATGTTATTTGTACTC 58.585 37.037 0.00 0.00 0.00 2.59
4562 4700 5.590530 TGCTGTATCACCAAACTTTTGTT 57.409 34.783 1.21 0.00 45.94 2.83
4565 4703 5.458779 GCTGTATCACCAAACTTTTGTTGAC 59.541 40.000 4.29 0.00 41.36 3.18
4571 4709 6.284459 TCACCAAACTTTTGTTGACAAACTT 58.716 32.000 8.70 1.80 44.56 2.66
4608 4746 0.835941 GATGGACAGTGGCAGAGGAT 59.164 55.000 0.00 0.00 0.00 3.24
4641 4779 7.738437 ATTTTGGTAGGGTGAAATCATGATT 57.262 32.000 15.36 15.36 0.00 2.57
4739 4877 8.958175 AAATGAAATTAGCACATGCAAAAATG 57.042 26.923 6.64 0.00 38.73 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.455383 CCTTGCTTGCGAGGTTTGGT 61.455 55.000 18.34 0.00 0.00 3.67
2 3 1.172180 TCCTTGCTTGCGAGGTTTGG 61.172 55.000 23.72 4.17 34.57 3.28
3 4 0.239347 CTCCTTGCTTGCGAGGTTTG 59.761 55.000 23.72 13.84 34.57 2.93
5 6 1.968540 GCTCCTTGCTTGCGAGGTT 60.969 57.895 23.72 0.00 38.95 3.50
6 7 2.359230 GCTCCTTGCTTGCGAGGT 60.359 61.111 23.72 0.00 38.95 3.85
8 9 2.866028 GTGCTCCTTGCTTGCGAG 59.134 61.111 0.00 0.00 43.37 5.03
9 10 3.043713 CGTGCTCCTTGCTTGCGA 61.044 61.111 0.00 0.00 43.37 5.10
10 11 4.748679 GCGTGCTCCTTGCTTGCG 62.749 66.667 0.00 0.00 43.37 4.85
12 13 1.790387 GTAGCGTGCTCCTTGCTTG 59.210 57.895 0.00 0.00 43.37 4.01
13 14 1.738099 CGTAGCGTGCTCCTTGCTT 60.738 57.895 0.00 0.00 43.37 3.91
14 15 2.125912 CGTAGCGTGCTCCTTGCT 60.126 61.111 0.00 0.00 43.37 3.91
15 16 3.188786 CCGTAGCGTGCTCCTTGC 61.189 66.667 0.00 0.00 43.25 4.01
16 17 2.509336 CCCGTAGCGTGCTCCTTG 60.509 66.667 0.00 0.00 0.00 3.61
17 18 2.678934 TCCCGTAGCGTGCTCCTT 60.679 61.111 0.00 0.00 0.00 3.36
18 19 3.141488 CTCCCGTAGCGTGCTCCT 61.141 66.667 0.00 0.00 0.00 3.69
19 20 4.874977 GCTCCCGTAGCGTGCTCC 62.875 72.222 0.00 0.00 42.53 4.70
27 28 4.208686 GGCTCCGTGCTCCCGTAG 62.209 72.222 0.00 0.00 42.39 3.51
33 34 3.844090 GAGAGGGGCTCCGTGCTC 61.844 72.222 0.00 1.67 42.70 4.26
46 47 3.551496 TTGCTGGGTTGGCCGAGAG 62.551 63.158 0.00 0.00 42.42 3.20
47 48 3.565214 TTGCTGGGTTGGCCGAGA 61.565 61.111 0.00 0.00 42.42 4.04
48 49 3.365265 GTTGCTGGGTTGGCCGAG 61.365 66.667 0.00 0.00 42.66 4.63
49 50 3.884774 AGTTGCTGGGTTGGCCGA 61.885 61.111 0.00 0.00 34.97 5.54
50 51 3.673484 CAGTTGCTGGGTTGGCCG 61.673 66.667 0.00 0.00 34.97 6.13
51 52 3.994853 GCAGTTGCTGGGTTGGCC 61.995 66.667 0.00 0.00 38.21 5.36
52 53 4.347453 CGCAGTTGCTGGGTTGGC 62.347 66.667 2.29 0.00 39.17 4.52
53 54 4.347453 GCGCAGTTGCTGGGTTGG 62.347 66.667 0.30 0.00 44.58 3.77
54 55 4.347453 GGCGCAGTTGCTGGGTTG 62.347 66.667 10.83 0.00 44.58 3.77
60 61 4.586235 AAGTGGGGCGCAGTTGCT 62.586 61.111 22.07 5.24 39.32 3.91
61 62 4.347453 CAAGTGGGGCGCAGTTGC 62.347 66.667 30.91 10.07 37.78 4.17
62 63 4.347453 GCAAGTGGGGCGCAGTTG 62.347 66.667 34.82 34.82 36.39 3.16
78 79 1.958205 CTCTCCAATGGCGATCGGC 60.958 63.158 32.48 32.48 42.51 5.54
79 80 1.301244 CCTCTCCAATGGCGATCGG 60.301 63.158 18.30 0.00 0.00 4.18
80 81 0.179073 AACCTCTCCAATGGCGATCG 60.179 55.000 11.69 11.69 0.00 3.69
81 82 1.943340 GAAACCTCTCCAATGGCGATC 59.057 52.381 0.00 0.00 0.00 3.69
82 83 1.281867 TGAAACCTCTCCAATGGCGAT 59.718 47.619 0.00 0.00 0.00 4.58
83 84 0.690192 TGAAACCTCTCCAATGGCGA 59.310 50.000 0.00 0.00 0.00 5.54
84 85 1.089920 CTGAAACCTCTCCAATGGCG 58.910 55.000 0.00 0.00 0.00 5.69
85 86 2.496899 TCTGAAACCTCTCCAATGGC 57.503 50.000 0.00 0.00 0.00 4.40
86 87 4.159135 CCAAATCTGAAACCTCTCCAATGG 59.841 45.833 0.00 0.00 0.00 3.16
87 88 4.381292 GCCAAATCTGAAACCTCTCCAATG 60.381 45.833 0.00 0.00 0.00 2.82
88 89 3.766051 GCCAAATCTGAAACCTCTCCAAT 59.234 43.478 0.00 0.00 0.00 3.16
89 90 3.157087 GCCAAATCTGAAACCTCTCCAA 58.843 45.455 0.00 0.00 0.00 3.53
90 91 2.555227 GGCCAAATCTGAAACCTCTCCA 60.555 50.000 0.00 0.00 0.00 3.86
91 92 2.095461 GGCCAAATCTGAAACCTCTCC 58.905 52.381 0.00 0.00 0.00 3.71
92 93 2.751806 CAGGCCAAATCTGAAACCTCTC 59.248 50.000 5.01 0.00 34.36 3.20
93 94 2.800250 CAGGCCAAATCTGAAACCTCT 58.200 47.619 5.01 0.00 34.36 3.69
94 95 1.203287 GCAGGCCAAATCTGAAACCTC 59.797 52.381 5.01 0.00 34.36 3.85
95 96 1.260544 GCAGGCCAAATCTGAAACCT 58.739 50.000 5.01 0.00 34.36 3.50
96 97 0.247460 GGCAGGCCAAATCTGAAACC 59.753 55.000 5.01 0.00 34.36 3.27
97 98 0.968405 TGGCAGGCCAAATCTGAAAC 59.032 50.000 11.25 0.00 44.12 2.78
98 99 3.453916 TGGCAGGCCAAATCTGAAA 57.546 47.368 11.25 0.00 44.12 2.69
108 109 4.262592 CCTCCAATTTAAATATGGCAGGCC 60.263 45.833 17.63 2.62 34.13 5.19
109 110 4.262592 CCCTCCAATTTAAATATGGCAGGC 60.263 45.833 22.30 0.00 33.66 4.85
110 111 5.147032 TCCCTCCAATTTAAATATGGCAGG 58.853 41.667 21.66 21.66 34.24 4.85
111 112 5.835280 ACTCCCTCCAATTTAAATATGGCAG 59.165 40.000 17.63 15.51 34.13 4.85
112 113 5.776358 ACTCCCTCCAATTTAAATATGGCA 58.224 37.500 17.63 0.00 34.13 4.92
113 114 6.208797 GGTACTCCCTCCAATTTAAATATGGC 59.791 42.308 17.63 7.25 34.13 4.40
114 115 7.294584 TGGTACTCCCTCCAATTTAAATATGG 58.705 38.462 16.87 16.87 35.49 2.74
115 116 8.760980 TTGGTACTCCCTCCAATTTAAATATG 57.239 34.615 0.01 2.78 38.57 1.78
116 117 9.197306 GTTTGGTACTCCCTCCAATTTAAATAT 57.803 33.333 0.01 0.00 42.25 1.28
117 118 7.337436 CGTTTGGTACTCCCTCCAATTTAAATA 59.663 37.037 0.01 0.00 42.25 1.40
118 119 6.152154 CGTTTGGTACTCCCTCCAATTTAAAT 59.848 38.462 0.00 0.00 42.25 1.40
119 120 5.474189 CGTTTGGTACTCCCTCCAATTTAAA 59.526 40.000 0.00 0.00 42.25 1.52
120 121 5.005094 CGTTTGGTACTCCCTCCAATTTAA 58.995 41.667 0.00 0.00 42.25 1.52
121 122 4.041938 ACGTTTGGTACTCCCTCCAATTTA 59.958 41.667 0.00 0.00 42.25 1.40
122 123 3.181437 ACGTTTGGTACTCCCTCCAATTT 60.181 43.478 0.00 0.00 42.25 1.82
123 124 2.374170 ACGTTTGGTACTCCCTCCAATT 59.626 45.455 0.00 0.00 42.25 2.32
124 125 1.982958 ACGTTTGGTACTCCCTCCAAT 59.017 47.619 0.00 0.00 42.25 3.16
125 126 1.071071 CACGTTTGGTACTCCCTCCAA 59.929 52.381 0.00 0.00 41.22 3.53
126 127 0.682852 CACGTTTGGTACTCCCTCCA 59.317 55.000 0.00 0.00 0.00 3.86
127 128 0.971386 TCACGTTTGGTACTCCCTCC 59.029 55.000 0.00 0.00 0.00 4.30
128 129 1.342174 TGTCACGTTTGGTACTCCCTC 59.658 52.381 0.00 0.00 0.00 4.30
129 130 1.416243 TGTCACGTTTGGTACTCCCT 58.584 50.000 0.00 0.00 0.00 4.20
130 131 2.073816 CATGTCACGTTTGGTACTCCC 58.926 52.381 0.00 0.00 0.00 4.30
131 132 1.463444 GCATGTCACGTTTGGTACTCC 59.537 52.381 0.00 0.00 0.00 3.85
132 133 2.139917 TGCATGTCACGTTTGGTACTC 58.860 47.619 0.00 0.00 0.00 2.59
133 134 2.248280 TGCATGTCACGTTTGGTACT 57.752 45.000 0.00 0.00 0.00 2.73
134 135 3.552604 AATGCATGTCACGTTTGGTAC 57.447 42.857 0.00 0.00 0.00 3.34
135 136 4.065789 TGTAATGCATGTCACGTTTGGTA 58.934 39.130 0.00 0.00 0.00 3.25
136 137 2.881513 TGTAATGCATGTCACGTTTGGT 59.118 40.909 0.00 0.00 0.00 3.67
137 138 3.233578 GTGTAATGCATGTCACGTTTGG 58.766 45.455 15.37 0.00 0.00 3.28
138 139 3.882982 TGTGTAATGCATGTCACGTTTG 58.117 40.909 21.32 0.00 34.08 2.93
139 140 4.764679 ATGTGTAATGCATGTCACGTTT 57.235 36.364 21.32 11.47 34.08 3.60
140 141 4.693095 TGTATGTGTAATGCATGTCACGTT 59.307 37.500 24.24 17.57 34.08 3.99
141 142 4.249661 TGTATGTGTAATGCATGTCACGT 58.750 39.130 23.27 23.27 34.08 4.49
142 143 4.856115 TGTATGTGTAATGCATGTCACG 57.144 40.909 21.32 0.00 34.08 4.35
143 144 5.937187 TGTTGTATGTGTAATGCATGTCAC 58.063 37.500 20.55 20.55 0.00 3.67
144 145 6.404513 CCATGTTGTATGTGTAATGCATGTCA 60.405 38.462 0.00 0.00 32.94 3.58
145 146 5.972973 CCATGTTGTATGTGTAATGCATGTC 59.027 40.000 0.00 0.00 32.94 3.06
146 147 5.651576 TCCATGTTGTATGTGTAATGCATGT 59.348 36.000 0.00 0.00 32.94 3.21
147 148 6.134040 TCCATGTTGTATGTGTAATGCATG 57.866 37.500 0.00 0.00 34.14 4.06
148 149 5.300034 CCTCCATGTTGTATGTGTAATGCAT 59.700 40.000 0.00 0.00 0.00 3.96
149 150 4.639755 CCTCCATGTTGTATGTGTAATGCA 59.360 41.667 0.00 0.00 0.00 3.96
150 151 4.036734 CCCTCCATGTTGTATGTGTAATGC 59.963 45.833 0.00 0.00 0.00 3.56
151 152 4.580167 CCCCTCCATGTTGTATGTGTAATG 59.420 45.833 0.00 0.00 0.00 1.90
152 153 4.229582 ACCCCTCCATGTTGTATGTGTAAT 59.770 41.667 0.00 0.00 0.00 1.89
153 154 3.589735 ACCCCTCCATGTTGTATGTGTAA 59.410 43.478 0.00 0.00 0.00 2.41
154 155 3.186283 ACCCCTCCATGTTGTATGTGTA 58.814 45.455 0.00 0.00 0.00 2.90
155 156 1.992557 ACCCCTCCATGTTGTATGTGT 59.007 47.619 0.00 0.00 0.00 3.72
156 157 2.806945 ACCCCTCCATGTTGTATGTG 57.193 50.000 0.00 0.00 0.00 3.21
157 158 3.825908 AAACCCCTCCATGTTGTATGT 57.174 42.857 0.00 0.00 0.00 2.29
158 159 4.526262 TCAAAAACCCCTCCATGTTGTATG 59.474 41.667 0.00 0.00 0.00 2.39
159 160 4.746466 TCAAAAACCCCTCCATGTTGTAT 58.254 39.130 0.00 0.00 0.00 2.29
160 161 4.141135 TCTCAAAAACCCCTCCATGTTGTA 60.141 41.667 0.00 0.00 0.00 2.41
161 162 2.965147 CTCAAAAACCCCTCCATGTTGT 59.035 45.455 0.00 0.00 0.00 3.32
162 163 3.230134 TCTCAAAAACCCCTCCATGTTG 58.770 45.455 0.00 0.00 0.00 3.33
163 164 3.140144 TCTCTCAAAAACCCCTCCATGTT 59.860 43.478 0.00 0.00 0.00 2.71
164 165 2.716424 TCTCTCAAAAACCCCTCCATGT 59.284 45.455 0.00 0.00 0.00 3.21
165 166 3.439857 TCTCTCAAAAACCCCTCCATG 57.560 47.619 0.00 0.00 0.00 3.66
166 167 3.399305 ACTTCTCTCAAAAACCCCTCCAT 59.601 43.478 0.00 0.00 0.00 3.41
167 168 2.783510 ACTTCTCTCAAAAACCCCTCCA 59.216 45.455 0.00 0.00 0.00 3.86
168 169 3.149981 CACTTCTCTCAAAAACCCCTCC 58.850 50.000 0.00 0.00 0.00 4.30
169 170 2.554462 GCACTTCTCTCAAAAACCCCTC 59.446 50.000 0.00 0.00 0.00 4.30
170 171 2.175715 AGCACTTCTCTCAAAAACCCCT 59.824 45.455 0.00 0.00 0.00 4.79
171 172 2.554462 GAGCACTTCTCTCAAAAACCCC 59.446 50.000 0.00 0.00 38.78 4.95
172 173 3.906014 GAGCACTTCTCTCAAAAACCC 57.094 47.619 0.00 0.00 38.78 4.11
182 183 8.324163 TCCTTTTGTTTATAAGAGCACTTCTC 57.676 34.615 0.00 0.00 42.21 2.87
183 184 8.691661 TTCCTTTTGTTTATAAGAGCACTTCT 57.308 30.769 0.00 0.00 37.53 2.85
184 185 9.744468 TTTTCCTTTTGTTTATAAGAGCACTTC 57.256 29.630 0.00 0.00 37.53 3.01
186 187 9.696917 CATTTTCCTTTTGTTTATAAGAGCACT 57.303 29.630 0.00 0.00 0.00 4.40
187 188 8.435430 GCATTTTCCTTTTGTTTATAAGAGCAC 58.565 33.333 0.00 0.00 0.00 4.40
188 189 8.367156 AGCATTTTCCTTTTGTTTATAAGAGCA 58.633 29.630 0.00 0.00 0.00 4.26
189 190 8.763049 AGCATTTTCCTTTTGTTTATAAGAGC 57.237 30.769 0.00 0.00 0.00 4.09
191 192 9.487790 CCAAGCATTTTCCTTTTGTTTATAAGA 57.512 29.630 0.00 0.00 0.00 2.10
192 193 8.229811 GCCAAGCATTTTCCTTTTGTTTATAAG 58.770 33.333 0.00 0.00 0.00 1.73
193 194 7.936301 AGCCAAGCATTTTCCTTTTGTTTATAA 59.064 29.630 0.00 0.00 0.00 0.98
194 195 7.449247 AGCCAAGCATTTTCCTTTTGTTTATA 58.551 30.769 0.00 0.00 0.00 0.98
195 196 6.298361 AGCCAAGCATTTTCCTTTTGTTTAT 58.702 32.000 0.00 0.00 0.00 1.40
196 197 5.679601 AGCCAAGCATTTTCCTTTTGTTTA 58.320 33.333 0.00 0.00 0.00 2.01
197 198 4.525996 AGCCAAGCATTTTCCTTTTGTTT 58.474 34.783 0.00 0.00 0.00 2.83
198 199 4.155063 AGCCAAGCATTTTCCTTTTGTT 57.845 36.364 0.00 0.00 0.00 2.83
199 200 3.843893 AGCCAAGCATTTTCCTTTTGT 57.156 38.095 0.00 0.00 0.00 2.83
200 201 4.128643 TGAAGCCAAGCATTTTCCTTTTG 58.871 39.130 0.00 0.00 0.00 2.44
201 202 4.383173 CTGAAGCCAAGCATTTTCCTTTT 58.617 39.130 0.00 0.00 0.00 2.27
202 203 3.804759 GCTGAAGCCAAGCATTTTCCTTT 60.805 43.478 0.00 0.00 34.31 3.11
203 204 2.289257 GCTGAAGCCAAGCATTTTCCTT 60.289 45.455 0.00 0.00 34.31 3.36
204 205 1.274447 GCTGAAGCCAAGCATTTTCCT 59.726 47.619 0.00 0.00 34.31 3.36
205 206 1.274447 AGCTGAAGCCAAGCATTTTCC 59.726 47.619 0.00 0.00 43.38 3.13
206 207 2.334838 CAGCTGAAGCCAAGCATTTTC 58.665 47.619 8.42 0.00 43.38 2.29
207 208 1.001633 CCAGCTGAAGCCAAGCATTTT 59.998 47.619 17.39 0.00 43.38 1.82
208 209 0.606604 CCAGCTGAAGCCAAGCATTT 59.393 50.000 17.39 0.00 43.38 2.32
209 210 1.885163 GCCAGCTGAAGCCAAGCATT 61.885 55.000 17.39 0.00 43.38 3.56
210 211 2.348888 GCCAGCTGAAGCCAAGCAT 61.349 57.895 17.39 0.00 43.38 3.79
211 212 2.987547 GCCAGCTGAAGCCAAGCA 60.988 61.111 17.39 0.00 43.38 3.91
212 213 4.112341 CGCCAGCTGAAGCCAAGC 62.112 66.667 17.39 7.07 43.38 4.01
213 214 3.437795 CCGCCAGCTGAAGCCAAG 61.438 66.667 17.39 0.00 43.38 3.61
214 215 2.769652 AATCCGCCAGCTGAAGCCAA 62.770 55.000 17.39 0.78 43.38 4.52
215 216 3.272364 AATCCGCCAGCTGAAGCCA 62.272 57.895 17.39 0.00 43.38 4.75
216 217 2.439156 AATCCGCCAGCTGAAGCC 60.439 61.111 17.39 0.00 43.38 4.35
217 218 0.744414 TACAATCCGCCAGCTGAAGC 60.744 55.000 17.39 10.33 42.49 3.86
218 219 1.009829 GTACAATCCGCCAGCTGAAG 58.990 55.000 17.39 8.42 0.00 3.02
219 220 0.739462 CGTACAATCCGCCAGCTGAA 60.739 55.000 17.39 0.00 0.00 3.02
220 221 1.153647 CGTACAATCCGCCAGCTGA 60.154 57.895 17.39 0.00 0.00 4.26
221 222 2.813179 GCGTACAATCCGCCAGCTG 61.813 63.158 6.78 6.78 45.20 4.24
222 223 2.511600 GCGTACAATCCGCCAGCT 60.512 61.111 0.00 0.00 45.20 4.24
228 229 0.304705 GGATGCTTGCGTACAATCCG 59.695 55.000 0.00 0.00 34.61 4.18
229 230 1.064060 GTGGATGCTTGCGTACAATCC 59.936 52.381 0.78 2.08 34.39 3.01
230 231 1.064060 GGTGGATGCTTGCGTACAATC 59.936 52.381 0.78 0.00 34.61 2.67
231 232 1.094785 GGTGGATGCTTGCGTACAAT 58.905 50.000 0.78 0.00 34.61 2.71
232 233 0.250510 TGGTGGATGCTTGCGTACAA 60.251 50.000 0.78 0.00 0.00 2.41
233 234 0.035534 ATGGTGGATGCTTGCGTACA 60.036 50.000 0.00 0.00 0.00 2.90
234 235 0.657840 GATGGTGGATGCTTGCGTAC 59.342 55.000 0.00 0.00 0.00 3.67
235 236 0.541392 AGATGGTGGATGCTTGCGTA 59.459 50.000 0.00 0.00 0.00 4.42
236 237 0.745845 GAGATGGTGGATGCTTGCGT 60.746 55.000 0.00 0.00 0.00 5.24
237 238 0.463295 AGAGATGGTGGATGCTTGCG 60.463 55.000 0.00 0.00 0.00 4.85
238 239 1.674962 GAAGAGATGGTGGATGCTTGC 59.325 52.381 0.00 0.00 0.00 4.01
239 240 2.295885 GGAAGAGATGGTGGATGCTTG 58.704 52.381 0.00 0.00 0.00 4.01
240 241 1.918262 TGGAAGAGATGGTGGATGCTT 59.082 47.619 0.00 0.00 0.00 3.91
241 242 1.588239 TGGAAGAGATGGTGGATGCT 58.412 50.000 0.00 0.00 0.00 3.79
242 243 2.158711 TCATGGAAGAGATGGTGGATGC 60.159 50.000 0.00 0.00 0.00 3.91
243 244 3.390311 TCTCATGGAAGAGATGGTGGATG 59.610 47.826 0.00 0.00 39.62 3.51
244 245 3.390639 GTCTCATGGAAGAGATGGTGGAT 59.609 47.826 0.00 0.00 45.61 3.41
245 246 2.768527 GTCTCATGGAAGAGATGGTGGA 59.231 50.000 0.00 0.00 45.61 4.02
246 247 2.482664 CGTCTCATGGAAGAGATGGTGG 60.483 54.545 5.49 0.00 45.61 4.61
247 248 2.819115 CGTCTCATGGAAGAGATGGTG 58.181 52.381 5.49 0.00 45.61 4.17
248 249 1.137872 GCGTCTCATGGAAGAGATGGT 59.862 52.381 13.30 0.00 46.78 3.55
249 250 1.863267 GCGTCTCATGGAAGAGATGG 58.137 55.000 13.30 3.80 46.78 3.51
251 252 1.107114 ACGCGTCTCATGGAAGAGAT 58.893 50.000 5.58 0.00 45.61 2.75
252 253 0.171231 CACGCGTCTCATGGAAGAGA 59.829 55.000 9.86 0.00 42.12 3.10
253 254 0.109086 ACACGCGTCTCATGGAAGAG 60.109 55.000 9.86 0.00 36.97 2.85
254 255 0.109272 GACACGCGTCTCATGGAAGA 60.109 55.000 9.86 0.00 39.22 2.87
255 256 0.388520 TGACACGCGTCTCATGGAAG 60.389 55.000 13.44 0.00 43.06 3.46
256 257 0.246360 ATGACACGCGTCTCATGGAA 59.754 50.000 26.07 1.62 43.06 3.53
257 258 0.246360 AATGACACGCGTCTCATGGA 59.754 50.000 27.08 2.81 43.06 3.41
258 259 0.371301 CAATGACACGCGTCTCATGG 59.629 55.000 27.08 21.64 43.06 3.66
259 260 1.349234 TCAATGACACGCGTCTCATG 58.651 50.000 27.08 20.39 43.06 3.07
260 261 2.196749 GATCAATGACACGCGTCTCAT 58.803 47.619 22.15 22.15 43.06 2.90
261 262 1.629013 GATCAATGACACGCGTCTCA 58.371 50.000 19.45 19.45 43.06 3.27
262 263 0.924090 GGATCAATGACACGCGTCTC 59.076 55.000 9.86 8.57 43.06 3.36
263 264 0.246360 TGGATCAATGACACGCGTCT 59.754 50.000 9.86 0.00 43.06 4.18
264 265 0.370273 GTGGATCAATGACACGCGTC 59.630 55.000 9.86 0.00 42.93 5.19
265 266 0.037326 AGTGGATCAATGACACGCGT 60.037 50.000 5.58 5.58 39.95 6.01
266 267 1.921243 TAGTGGATCAATGACACGCG 58.079 50.000 3.53 3.53 39.95 6.01
267 268 4.445718 CACTATAGTGGATCAATGACACGC 59.554 45.833 22.95 0.00 42.10 5.34
268 269 5.831997 TCACTATAGTGGATCAATGACACG 58.168 41.667 28.33 2.35 45.65 4.49
269 270 6.810911 ACTCACTATAGTGGATCAATGACAC 58.189 40.000 28.33 0.00 45.65 3.67
270 271 7.423844 AACTCACTATAGTGGATCAATGACA 57.576 36.000 28.33 7.98 45.65 3.58
271 272 8.723942 AAAACTCACTATAGTGGATCAATGAC 57.276 34.615 28.33 0.00 45.65 3.06
296 297 8.550376 GTCTGTGTTTATACCGTGTTCTAAAAA 58.450 33.333 0.00 0.00 0.00 1.94
297 298 7.096106 CGTCTGTGTTTATACCGTGTTCTAAAA 60.096 37.037 0.00 0.00 0.00 1.52
298 299 6.363088 CGTCTGTGTTTATACCGTGTTCTAAA 59.637 38.462 0.00 0.00 0.00 1.85
299 300 5.858049 CGTCTGTGTTTATACCGTGTTCTAA 59.142 40.000 0.00 0.00 0.00 2.10
300 301 5.393124 CGTCTGTGTTTATACCGTGTTCTA 58.607 41.667 0.00 0.00 0.00 2.10
301 302 4.232221 CGTCTGTGTTTATACCGTGTTCT 58.768 43.478 0.00 0.00 0.00 3.01
302 303 3.181537 GCGTCTGTGTTTATACCGTGTTC 60.182 47.826 0.00 0.00 0.00 3.18
303 304 2.733026 GCGTCTGTGTTTATACCGTGTT 59.267 45.455 0.00 0.00 0.00 3.32
304 305 2.029649 AGCGTCTGTGTTTATACCGTGT 60.030 45.455 0.00 0.00 0.00 4.49
305 306 2.597305 GAGCGTCTGTGTTTATACCGTG 59.403 50.000 0.00 0.00 0.00 4.94
306 307 2.229543 TGAGCGTCTGTGTTTATACCGT 59.770 45.455 0.00 0.00 0.00 4.83
307 308 2.871133 TGAGCGTCTGTGTTTATACCG 58.129 47.619 0.00 0.00 0.00 4.02
308 309 9.286946 GTATATATGAGCGTCTGTGTTTATACC 57.713 37.037 0.00 0.00 0.00 2.73
309 310 9.836076 TGTATATATGAGCGTCTGTGTTTATAC 57.164 33.333 0.00 0.00 0.00 1.47
310 311 9.836076 GTGTATATATGAGCGTCTGTGTTTATA 57.164 33.333 0.00 0.00 0.00 0.98
311 312 7.537649 CGTGTATATATGAGCGTCTGTGTTTAT 59.462 37.037 0.00 0.00 0.00 1.40
312 313 6.854381 CGTGTATATATGAGCGTCTGTGTTTA 59.146 38.462 0.00 0.00 0.00 2.01
313 314 5.685954 CGTGTATATATGAGCGTCTGTGTTT 59.314 40.000 0.00 0.00 0.00 2.83
314 315 5.212934 CGTGTATATATGAGCGTCTGTGTT 58.787 41.667 0.00 0.00 0.00 3.32
315 316 4.784329 CGTGTATATATGAGCGTCTGTGT 58.216 43.478 0.00 0.00 0.00 3.72
316 317 3.604198 GCGTGTATATATGAGCGTCTGTG 59.396 47.826 0.00 0.00 0.00 3.66
317 318 3.252458 TGCGTGTATATATGAGCGTCTGT 59.748 43.478 0.00 0.00 0.00 3.41
318 319 3.821841 TGCGTGTATATATGAGCGTCTG 58.178 45.455 0.00 0.00 0.00 3.51
319 320 4.703645 ATGCGTGTATATATGAGCGTCT 57.296 40.909 0.00 0.00 0.00 4.18
320 321 8.729529 AATATATGCGTGTATATATGAGCGTC 57.270 34.615 10.09 0.00 36.70 5.19
321 322 8.349983 TGAATATATGCGTGTATATATGAGCGT 58.650 33.333 10.09 0.32 36.70 5.07
322 323 8.728088 TGAATATATGCGTGTATATATGAGCG 57.272 34.615 10.09 0.00 36.70 5.03
345 346 6.456853 GCTTGCGTATGTGTTCATAAAGATGA 60.457 38.462 0.00 0.00 40.45 2.92
346 347 5.678483 GCTTGCGTATGTGTTCATAAAGATG 59.322 40.000 0.00 0.00 38.13 2.90
347 348 5.220854 GGCTTGCGTATGTGTTCATAAAGAT 60.221 40.000 0.00 0.00 38.13 2.40
348 349 4.094294 GGCTTGCGTATGTGTTCATAAAGA 59.906 41.667 0.00 0.00 38.13 2.52
349 350 4.342772 GGCTTGCGTATGTGTTCATAAAG 58.657 43.478 0.00 0.00 38.13 1.85
350 351 3.127895 GGGCTTGCGTATGTGTTCATAAA 59.872 43.478 0.00 0.00 38.13 1.40
351 352 2.680841 GGGCTTGCGTATGTGTTCATAA 59.319 45.455 0.00 0.00 38.13 1.90
352 353 2.093181 AGGGCTTGCGTATGTGTTCATA 60.093 45.455 0.00 0.00 35.70 2.15
353 354 1.094785 GGGCTTGCGTATGTGTTCAT 58.905 50.000 0.00 0.00 38.00 2.57
354 355 0.036164 AGGGCTTGCGTATGTGTTCA 59.964 50.000 0.00 0.00 0.00 3.18
355 356 1.664151 GTAGGGCTTGCGTATGTGTTC 59.336 52.381 0.00 0.00 0.00 3.18
356 357 1.677820 GGTAGGGCTTGCGTATGTGTT 60.678 52.381 0.00 0.00 0.00 3.32
357 358 0.107848 GGTAGGGCTTGCGTATGTGT 60.108 55.000 0.00 0.00 0.00 3.72
358 359 0.814010 GGGTAGGGCTTGCGTATGTG 60.814 60.000 0.00 0.00 0.00 3.21
359 360 1.525442 GGGTAGGGCTTGCGTATGT 59.475 57.895 0.00 0.00 0.00 2.29
360 361 1.227853 GGGGTAGGGCTTGCGTATG 60.228 63.158 0.00 0.00 0.00 2.39
361 362 0.105349 TAGGGGTAGGGCTTGCGTAT 60.105 55.000 0.00 0.00 0.00 3.06
362 363 0.105349 ATAGGGGTAGGGCTTGCGTA 60.105 55.000 0.00 0.00 0.00 4.42
363 364 1.384082 ATAGGGGTAGGGCTTGCGT 60.384 57.895 0.00 0.00 0.00 5.24
364 365 1.071471 CATAGGGGTAGGGCTTGCG 59.929 63.158 0.00 0.00 0.00 4.85
365 366 0.398318 CTCATAGGGGTAGGGCTTGC 59.602 60.000 0.00 0.00 0.00 4.01
366 367 0.398318 GCTCATAGGGGTAGGGCTTG 59.602 60.000 0.00 0.00 0.00 4.01
367 368 0.030092 TGCTCATAGGGGTAGGGCTT 60.030 55.000 0.00 0.00 0.00 4.35
368 369 0.764752 GTGCTCATAGGGGTAGGGCT 60.765 60.000 0.00 0.00 0.00 5.19
369 370 1.054406 TGTGCTCATAGGGGTAGGGC 61.054 60.000 0.00 0.00 0.00 5.19
370 371 1.625818 GATGTGCTCATAGGGGTAGGG 59.374 57.143 0.32 0.00 34.06 3.53
371 372 1.625818 GGATGTGCTCATAGGGGTAGG 59.374 57.143 0.32 0.00 34.06 3.18
372 373 1.273606 CGGATGTGCTCATAGGGGTAG 59.726 57.143 0.32 0.00 34.06 3.18
373 374 1.133294 TCGGATGTGCTCATAGGGGTA 60.133 52.381 0.32 0.00 34.06 3.69
374 375 0.398522 TCGGATGTGCTCATAGGGGT 60.399 55.000 0.32 0.00 34.06 4.95
375 376 0.319728 CTCGGATGTGCTCATAGGGG 59.680 60.000 0.32 0.00 34.06 4.79
376 377 1.332195 TCTCGGATGTGCTCATAGGG 58.668 55.000 0.32 0.00 34.06 3.53
377 378 3.459232 TTTCTCGGATGTGCTCATAGG 57.541 47.619 0.32 0.00 34.06 2.57
378 379 4.437239 AGTTTTCTCGGATGTGCTCATAG 58.563 43.478 0.32 0.00 34.06 2.23
379 380 4.471904 AGTTTTCTCGGATGTGCTCATA 57.528 40.909 0.32 0.00 34.06 2.15
380 381 3.340814 AGTTTTCTCGGATGTGCTCAT 57.659 42.857 0.00 0.00 36.95 2.90
381 382 2.839486 AGTTTTCTCGGATGTGCTCA 57.161 45.000 0.00 0.00 0.00 4.26
382 383 3.062774 GCTTAGTTTTCTCGGATGTGCTC 59.937 47.826 0.00 0.00 0.00 4.26
383 384 3.003480 GCTTAGTTTTCTCGGATGTGCT 58.997 45.455 0.00 0.00 0.00 4.40
384 385 2.096013 GGCTTAGTTTTCTCGGATGTGC 59.904 50.000 0.00 0.00 0.00 4.57
385 386 2.348666 CGGCTTAGTTTTCTCGGATGTG 59.651 50.000 0.00 0.00 0.00 3.21
386 387 2.232941 TCGGCTTAGTTTTCTCGGATGT 59.767 45.455 0.00 0.00 0.00 3.06
387 388 2.603560 GTCGGCTTAGTTTTCTCGGATG 59.396 50.000 0.00 0.00 0.00 3.51
388 389 2.232941 TGTCGGCTTAGTTTTCTCGGAT 59.767 45.455 0.00 0.00 0.00 4.18
389 390 1.614903 TGTCGGCTTAGTTTTCTCGGA 59.385 47.619 0.00 0.00 0.00 4.55
390 391 2.074547 TGTCGGCTTAGTTTTCTCGG 57.925 50.000 0.00 0.00 0.00 4.63
391 392 5.041287 TGATATGTCGGCTTAGTTTTCTCG 58.959 41.667 0.00 0.00 0.00 4.04
392 393 6.926272 AGATGATATGTCGGCTTAGTTTTCTC 59.074 38.462 0.00 0.00 0.00 2.87
393 394 6.821388 AGATGATATGTCGGCTTAGTTTTCT 58.179 36.000 0.00 0.00 0.00 2.52
394 395 7.224753 TCAAGATGATATGTCGGCTTAGTTTTC 59.775 37.037 0.00 0.00 0.00 2.29
395 396 7.047891 TCAAGATGATATGTCGGCTTAGTTTT 58.952 34.615 0.00 0.00 0.00 2.43
396 397 6.582636 TCAAGATGATATGTCGGCTTAGTTT 58.417 36.000 0.00 0.00 0.00 2.66
397 398 6.161855 TCAAGATGATATGTCGGCTTAGTT 57.838 37.500 0.00 0.00 0.00 2.24
398 399 5.791336 TCAAGATGATATGTCGGCTTAGT 57.209 39.130 0.00 0.00 0.00 2.24
399 400 7.664082 ATTTCAAGATGATATGTCGGCTTAG 57.336 36.000 0.00 0.00 0.00 2.18
400 401 7.714813 TCAATTTCAAGATGATATGTCGGCTTA 59.285 33.333 0.00 0.00 0.00 3.09
401 402 6.543465 TCAATTTCAAGATGATATGTCGGCTT 59.457 34.615 0.00 0.00 0.00 4.35
402 403 6.017605 GTCAATTTCAAGATGATATGTCGGCT 60.018 38.462 0.00 0.00 0.00 5.52
403 404 6.138761 GTCAATTTCAAGATGATATGTCGGC 58.861 40.000 0.00 0.00 0.00 5.54
404 405 7.250445 TGTCAATTTCAAGATGATATGTCGG 57.750 36.000 0.00 0.00 0.00 4.79
405 406 9.726232 ATTTGTCAATTTCAAGATGATATGTCG 57.274 29.630 0.00 0.00 0.00 4.35
410 411 9.859427 GGTGAATTTGTCAATTTCAAGATGATA 57.141 29.630 19.40 0.00 38.23 2.15
411 412 8.369424 TGGTGAATTTGTCAATTTCAAGATGAT 58.631 29.630 19.40 0.00 38.23 2.45
412 413 7.652909 GTGGTGAATTTGTCAATTTCAAGATGA 59.347 33.333 19.40 4.93 38.23 2.92
413 414 7.438757 TGTGGTGAATTTGTCAATTTCAAGATG 59.561 33.333 19.40 0.00 38.23 2.90
414 415 7.439056 GTGTGGTGAATTTGTCAATTTCAAGAT 59.561 33.333 19.40 0.00 38.23 2.40
415 416 6.756074 GTGTGGTGAATTTGTCAATTTCAAGA 59.244 34.615 19.40 9.88 38.23 3.02
416 417 6.291743 CGTGTGGTGAATTTGTCAATTTCAAG 60.292 38.462 19.40 7.85 38.23 3.02
417 418 5.518128 CGTGTGGTGAATTTGTCAATTTCAA 59.482 36.000 19.40 7.25 38.23 2.69
418 419 5.039984 CGTGTGGTGAATTTGTCAATTTCA 58.960 37.500 15.58 15.58 38.23 2.69
419 420 4.085107 GCGTGTGGTGAATTTGTCAATTTC 60.085 41.667 11.58 11.58 38.23 2.17
420 421 3.801594 GCGTGTGGTGAATTTGTCAATTT 59.198 39.130 0.00 0.00 38.23 1.82
421 422 3.380142 GCGTGTGGTGAATTTGTCAATT 58.620 40.909 0.00 0.00 38.23 2.32
422 423 2.288152 GGCGTGTGGTGAATTTGTCAAT 60.288 45.455 0.00 0.00 38.23 2.57
423 424 1.066303 GGCGTGTGGTGAATTTGTCAA 59.934 47.619 0.00 0.00 38.23 3.18
424 425 0.665835 GGCGTGTGGTGAATTTGTCA 59.334 50.000 0.00 0.00 0.00 3.58
425 426 0.039527 GGGCGTGTGGTGAATTTGTC 60.040 55.000 0.00 0.00 0.00 3.18
426 427 1.460273 GGGGCGTGTGGTGAATTTGT 61.460 55.000 0.00 0.00 0.00 2.83
427 428 1.178534 AGGGGCGTGTGGTGAATTTG 61.179 55.000 0.00 0.00 0.00 2.32
428 429 0.893727 GAGGGGCGTGTGGTGAATTT 60.894 55.000 0.00 0.00 0.00 1.82
429 430 1.303317 GAGGGGCGTGTGGTGAATT 60.303 57.895 0.00 0.00 0.00 2.17
430 431 2.351276 GAGGGGCGTGTGGTGAAT 59.649 61.111 0.00 0.00 0.00 2.57
431 432 4.308458 CGAGGGGCGTGTGGTGAA 62.308 66.667 0.00 0.00 34.64 3.18
455 456 7.558034 GTTCAGTGGGAATAGACGTTCTCGT 62.558 48.000 0.00 0.00 44.76 4.18
456 457 2.422479 TCAGTGGGAATAGACGTTCTCG 59.578 50.000 0.00 0.00 43.34 4.04
457 458 4.174762 GTTCAGTGGGAATAGACGTTCTC 58.825 47.826 0.00 0.00 37.93 2.87
458 459 3.576982 TGTTCAGTGGGAATAGACGTTCT 59.423 43.478 0.00 0.00 37.93 3.01
459 460 3.921677 TGTTCAGTGGGAATAGACGTTC 58.078 45.455 0.00 0.00 37.93 3.95
460 461 4.253685 CATGTTCAGTGGGAATAGACGTT 58.746 43.478 0.00 0.00 37.93 3.99
461 462 3.861840 CATGTTCAGTGGGAATAGACGT 58.138 45.455 0.00 0.00 37.93 4.34
462 463 2.609459 GCATGTTCAGTGGGAATAGACG 59.391 50.000 0.00 0.00 37.93 4.18
463 464 3.609853 TGCATGTTCAGTGGGAATAGAC 58.390 45.455 0.00 0.00 37.93 2.59
464 465 3.998913 TGCATGTTCAGTGGGAATAGA 57.001 42.857 0.00 0.00 37.93 1.98
465 466 3.249320 CGATGCATGTTCAGTGGGAATAG 59.751 47.826 2.46 0.00 37.93 1.73
466 467 3.205338 CGATGCATGTTCAGTGGGAATA 58.795 45.455 2.46 0.00 37.93 1.75
467 468 2.019249 CGATGCATGTTCAGTGGGAAT 58.981 47.619 2.46 0.00 37.93 3.01
468 469 1.452110 CGATGCATGTTCAGTGGGAA 58.548 50.000 2.46 0.00 0.00 3.97
469 470 1.026182 GCGATGCATGTTCAGTGGGA 61.026 55.000 2.46 0.00 0.00 4.37
470 471 1.430632 GCGATGCATGTTCAGTGGG 59.569 57.895 2.46 0.00 0.00 4.61
471 472 1.430632 GGCGATGCATGTTCAGTGG 59.569 57.895 2.46 0.00 0.00 4.00
472 473 1.061411 CGGCGATGCATGTTCAGTG 59.939 57.895 2.46 0.00 0.00 3.66
473 474 0.673333 TTCGGCGATGCATGTTCAGT 60.673 50.000 11.76 0.00 0.00 3.41
474 475 0.447406 TTTCGGCGATGCATGTTCAG 59.553 50.000 11.76 0.00 0.00 3.02
475 476 1.093972 ATTTCGGCGATGCATGTTCA 58.906 45.000 11.76 0.00 0.00 3.18
476 477 2.193306 AATTTCGGCGATGCATGTTC 57.807 45.000 11.76 0.00 0.00 3.18
477 478 2.652941 AAATTTCGGCGATGCATGTT 57.347 40.000 11.76 0.00 0.00 2.71
478 479 2.652941 AAAATTTCGGCGATGCATGT 57.347 40.000 11.76 0.00 0.00 3.21
479 480 2.922387 TCAAAAATTTCGGCGATGCATG 59.078 40.909 11.76 6.02 0.00 4.06
480 481 3.229276 TCAAAAATTTCGGCGATGCAT 57.771 38.095 11.76 0.00 0.00 3.96
481 482 2.713895 TCAAAAATTTCGGCGATGCA 57.286 40.000 11.76 0.00 0.00 3.96
482 483 5.694674 TTATTCAAAAATTTCGGCGATGC 57.305 34.783 11.76 0.00 0.00 3.91
483 484 7.009999 TGGATTTATTCAAAAATTTCGGCGATG 59.990 33.333 11.76 4.79 0.00 3.84
484 485 7.038659 TGGATTTATTCAAAAATTTCGGCGAT 58.961 30.769 11.76 0.00 0.00 4.58
485 486 6.390721 TGGATTTATTCAAAAATTTCGGCGA 58.609 32.000 4.99 4.99 0.00 5.54
486 487 6.237808 CCTGGATTTATTCAAAAATTTCGGCG 60.238 38.462 0.00 0.00 0.00 6.46
487 488 6.816140 TCCTGGATTTATTCAAAAATTTCGGC 59.184 34.615 0.00 0.00 0.00 5.54
488 489 8.770438 TTCCTGGATTTATTCAAAAATTTCGG 57.230 30.769 0.00 0.00 0.00 4.30
495 496 8.637986 CGGGATTATTCCTGGATTTATTCAAAA 58.362 33.333 0.00 0.00 43.74 2.44
496 497 8.177119 CGGGATTATTCCTGGATTTATTCAAA 57.823 34.615 0.00 0.00 43.74 2.69
497 498 7.759489 CGGGATTATTCCTGGATTTATTCAA 57.241 36.000 0.00 0.00 43.74 2.69
508 509 3.703001 ATAGCACCGGGATTATTCCTG 57.297 47.619 6.32 5.61 46.60 3.86
509 510 4.223032 CACTATAGCACCGGGATTATTCCT 59.777 45.833 6.32 0.00 42.20 3.36
510 511 4.222145 TCACTATAGCACCGGGATTATTCC 59.778 45.833 6.32 0.00 41.77 3.01
511 512 5.047235 ACTCACTATAGCACCGGGATTATTC 60.047 44.000 6.32 0.00 0.00 1.75
512 513 4.838986 ACTCACTATAGCACCGGGATTATT 59.161 41.667 6.32 0.00 0.00 1.40
513 514 4.417437 ACTCACTATAGCACCGGGATTAT 58.583 43.478 6.32 2.65 0.00 1.28
514 515 3.840991 ACTCACTATAGCACCGGGATTA 58.159 45.455 6.32 0.00 0.00 1.75
515 516 2.679082 ACTCACTATAGCACCGGGATT 58.321 47.619 6.32 0.00 0.00 3.01
516 517 2.383442 ACTCACTATAGCACCGGGAT 57.617 50.000 6.32 0.00 0.00 3.85
517 518 3.520691 ATACTCACTATAGCACCGGGA 57.479 47.619 6.32 0.00 0.00 5.14
518 519 4.202223 ACAAATACTCACTATAGCACCGGG 60.202 45.833 6.32 0.00 0.00 5.73
519 520 4.945246 ACAAATACTCACTATAGCACCGG 58.055 43.478 0.00 0.00 0.00 5.28
520 521 7.368059 TGATACAAATACTCACTATAGCACCG 58.632 38.462 0.00 0.00 0.00 4.94
521 522 9.712305 ATTGATACAAATACTCACTATAGCACC 57.288 33.333 0.00 0.00 0.00 5.01
529 530 9.507329 ACAAAGACATTGATACAAATACTCACT 57.493 29.630 0.00 0.00 41.85 3.41
532 533 9.065871 GCAACAAAGACATTGATACAAATACTC 57.934 33.333 0.00 0.00 41.85 2.59
533 534 8.575589 TGCAACAAAGACATTGATACAAATACT 58.424 29.630 0.00 0.00 41.85 2.12
534 535 8.741101 TGCAACAAAGACATTGATACAAATAC 57.259 30.769 0.00 0.00 41.85 1.89
535 536 9.755804 TTTGCAACAAAGACATTGATACAAATA 57.244 25.926 0.00 0.00 41.85 1.40
536 537 8.659925 TTTGCAACAAAGACATTGATACAAAT 57.340 26.923 0.00 0.00 41.85 2.32
537 538 8.484641 TTTTGCAACAAAGACATTGATACAAA 57.515 26.923 0.00 0.00 41.85 2.83
538 539 8.484641 TTTTTGCAACAAAGACATTGATACAA 57.515 26.923 0.00 0.00 41.85 2.41
539 540 7.978414 TCTTTTTGCAACAAAGACATTGATACA 59.022 29.630 22.10 6.67 41.85 2.29
540 541 8.351495 TCTTTTTGCAACAAAGACATTGATAC 57.649 30.769 22.10 0.00 41.85 2.24
541 542 8.412456 TCTCTTTTTGCAACAAAGACATTGATA 58.588 29.630 22.10 8.76 41.85 2.15
542 543 7.267128 TCTCTTTTTGCAACAAAGACATTGAT 58.733 30.769 22.10 0.00 41.85 2.57
543 544 6.629128 TCTCTTTTTGCAACAAAGACATTGA 58.371 32.000 22.10 17.50 41.85 2.57
544 545 6.890663 TCTCTTTTTGCAACAAAGACATTG 57.109 33.333 22.10 16.24 44.95 2.82
545 546 7.043565 ACATCTCTTTTTGCAACAAAGACATT 58.956 30.769 22.10 12.91 35.71 2.71
546 547 6.576185 ACATCTCTTTTTGCAACAAAGACAT 58.424 32.000 22.10 17.77 35.71 3.06
547 548 5.964758 ACATCTCTTTTTGCAACAAAGACA 58.035 33.333 22.10 16.80 35.71 3.41
548 549 7.487829 TGTTACATCTCTTTTTGCAACAAAGAC 59.512 33.333 22.10 15.62 35.71 3.01
549 550 7.542890 TGTTACATCTCTTTTTGCAACAAAGA 58.457 30.769 23.34 23.34 37.82 2.52
550 551 7.754069 TGTTACATCTCTTTTTGCAACAAAG 57.246 32.000 19.50 19.50 28.72 2.77
551 552 8.031864 TCTTGTTACATCTCTTTTTGCAACAAA 58.968 29.630 0.00 2.72 38.16 2.83
552 553 7.487829 GTCTTGTTACATCTCTTTTTGCAACAA 59.512 33.333 0.00 0.00 36.98 2.83
553 554 6.972328 GTCTTGTTACATCTCTTTTTGCAACA 59.028 34.615 0.00 0.00 29.52 3.33
554 555 6.417930 GGTCTTGTTACATCTCTTTTTGCAAC 59.582 38.462 0.00 0.00 0.00 4.17
555 556 6.321181 AGGTCTTGTTACATCTCTTTTTGCAA 59.679 34.615 0.00 0.00 0.00 4.08
556 557 5.827797 AGGTCTTGTTACATCTCTTTTTGCA 59.172 36.000 0.00 0.00 0.00 4.08
557 558 6.319141 AGGTCTTGTTACATCTCTTTTTGC 57.681 37.500 0.00 0.00 0.00 3.68
558 559 8.190784 ACAAAGGTCTTGTTACATCTCTTTTTG 58.809 33.333 0.00 0.00 0.00 2.44
559 560 8.293699 ACAAAGGTCTTGTTACATCTCTTTTT 57.706 30.769 0.00 0.00 0.00 1.94
560 561 7.881775 ACAAAGGTCTTGTTACATCTCTTTT 57.118 32.000 0.00 0.00 0.00 2.27
561 562 7.881775 AACAAAGGTCTTGTTACATCTCTTT 57.118 32.000 1.13 0.00 40.47 2.52
562 563 8.974060 TTAACAAAGGTCTTGTTACATCTCTT 57.026 30.769 9.07 0.00 42.49 2.85
563 564 8.974060 TTTAACAAAGGTCTTGTTACATCTCT 57.026 30.769 9.07 0.00 42.49 3.10
601 602 9.653287 TGACAATAGAGATCTCGTTGTAATTTT 57.347 29.630 31.58 18.41 40.58 1.82
602 603 9.653287 TTGACAATAGAGATCTCGTTGTAATTT 57.347 29.630 31.58 18.90 40.58 1.82
603 604 9.653287 TTTGACAATAGAGATCTCGTTGTAATT 57.347 29.630 31.58 19.15 40.58 1.40
604 605 9.653287 TTTTGACAATAGAGATCTCGTTGTAAT 57.347 29.630 31.58 19.39 40.58 1.89
605 606 9.483916 TTTTTGACAATAGAGATCTCGTTGTAA 57.516 29.630 31.58 26.49 40.58 2.41
607 608 7.962964 TTTTTGACAATAGAGATCTCGTTGT 57.037 32.000 31.81 31.81 41.97 3.32
629 630 3.763897 ACAGAGGTCTTGTTGCAGTTTTT 59.236 39.130 0.00 0.00 0.00 1.94
630 631 3.356290 ACAGAGGTCTTGTTGCAGTTTT 58.644 40.909 0.00 0.00 0.00 2.43
631 632 3.004752 ACAGAGGTCTTGTTGCAGTTT 57.995 42.857 0.00 0.00 0.00 2.66
632 633 2.717639 ACAGAGGTCTTGTTGCAGTT 57.282 45.000 0.00 0.00 0.00 3.16
633 634 2.717639 AACAGAGGTCTTGTTGCAGT 57.282 45.000 0.00 0.00 0.00 4.40
634 635 3.466836 TGTAACAGAGGTCTTGTTGCAG 58.533 45.455 5.07 0.00 34.29 4.41
635 636 3.552132 TGTAACAGAGGTCTTGTTGCA 57.448 42.857 5.07 5.07 36.20 4.08
636 637 4.893424 TTTGTAACAGAGGTCTTGTTGC 57.107 40.909 1.18 0.69 0.00 4.17
730 731 9.040939 GTTGCAGAAAATTTTACAACATAGGTT 57.959 29.630 24.69 0.00 37.81 3.50
731 732 8.200792 TGTTGCAGAAAATTTTACAACATAGGT 58.799 29.630 26.63 0.00 41.58 3.08
732 733 8.586570 TGTTGCAGAAAATTTTACAACATAGG 57.413 30.769 26.63 6.34 41.58 2.57
737 738 8.130307 AGTCATGTTGCAGAAAATTTTACAAC 57.870 30.769 23.75 23.75 38.25 3.32
738 739 8.715191 AAGTCATGTTGCAGAAAATTTTACAA 57.285 26.923 2.75 6.43 0.00 2.41
739 740 9.979578 ATAAGTCATGTTGCAGAAAATTTTACA 57.020 25.926 2.75 4.72 0.00 2.41
741 742 9.979578 ACATAAGTCATGTTGCAGAAAATTTTA 57.020 25.926 2.75 0.00 46.01 1.52
742 743 8.891671 ACATAAGTCATGTTGCAGAAAATTTT 57.108 26.923 2.28 2.28 46.01 1.82
779 780 0.615331 TTGGCCCTGTGTTGCAAAAA 59.385 45.000 0.00 0.00 0.00 1.94
780 781 0.107945 GTTGGCCCTGTGTTGCAAAA 60.108 50.000 0.00 0.00 0.00 2.44
781 782 1.260538 TGTTGGCCCTGTGTTGCAAA 61.261 50.000 0.00 0.00 0.00 3.68
782 783 1.260538 TTGTTGGCCCTGTGTTGCAA 61.261 50.000 0.00 0.00 0.00 4.08
783 784 1.047596 ATTGTTGGCCCTGTGTTGCA 61.048 50.000 0.00 0.00 0.00 4.08
784 785 0.965439 TATTGTTGGCCCTGTGTTGC 59.035 50.000 0.00 0.00 0.00 4.17
785 786 2.513753 TCTATTGTTGGCCCTGTGTTG 58.486 47.619 0.00 0.00 0.00 3.33
786 787 2.969821 TCTATTGTTGGCCCTGTGTT 57.030 45.000 0.00 0.00 0.00 3.32
787 788 2.555227 CCTTCTATTGTTGGCCCTGTGT 60.555 50.000 0.00 0.00 0.00 3.72
788 789 2.094675 CCTTCTATTGTTGGCCCTGTG 58.905 52.381 0.00 0.00 0.00 3.66
789 790 1.710809 ACCTTCTATTGTTGGCCCTGT 59.289 47.619 0.00 0.00 0.00 4.00
790 791 2.094675 CACCTTCTATTGTTGGCCCTG 58.905 52.381 0.00 0.00 0.00 4.45
791 792 1.992557 TCACCTTCTATTGTTGGCCCT 59.007 47.619 0.00 0.00 0.00 5.19
792 793 2.092323 GTCACCTTCTATTGTTGGCCC 58.908 52.381 0.00 0.00 0.00 5.80
793 794 1.737793 CGTCACCTTCTATTGTTGGCC 59.262 52.381 0.00 0.00 0.00 5.36
794 795 1.130561 GCGTCACCTTCTATTGTTGGC 59.869 52.381 0.00 0.00 0.00 4.52
795 796 2.673368 GAGCGTCACCTTCTATTGTTGG 59.327 50.000 0.00 0.00 0.00 3.77
796 797 2.673368 GGAGCGTCACCTTCTATTGTTG 59.327 50.000 0.00 0.00 0.00 3.33
797 798 2.301870 TGGAGCGTCACCTTCTATTGTT 59.698 45.455 0.00 0.00 0.00 2.83
798 799 1.899814 TGGAGCGTCACCTTCTATTGT 59.100 47.619 0.00 0.00 0.00 2.71
799 800 2.271800 GTGGAGCGTCACCTTCTATTG 58.728 52.381 1.74 0.00 0.00 1.90
800 801 1.135083 CGTGGAGCGTCACCTTCTATT 60.135 52.381 6.84 0.00 34.36 1.73
801 802 0.456221 CGTGGAGCGTCACCTTCTAT 59.544 55.000 6.84 0.00 34.36 1.98
802 803 1.592400 CCGTGGAGCGTCACCTTCTA 61.592 60.000 6.84 0.00 39.32 2.10
803 804 2.651361 CGTGGAGCGTCACCTTCT 59.349 61.111 6.84 0.00 34.36 2.85
804 805 2.432628 CCGTGGAGCGTCACCTTC 60.433 66.667 6.84 0.00 39.32 3.46
805 806 4.681978 GCCGTGGAGCGTCACCTT 62.682 66.667 6.84 0.00 39.32 3.50
808 809 4.357947 TGAGCCGTGGAGCGTCAC 62.358 66.667 2.94 2.94 39.32 3.67
809 810 4.056125 CTGAGCCGTGGAGCGTCA 62.056 66.667 0.00 0.00 39.32 4.35
810 811 3.973267 GACTGAGCCGTGGAGCGTC 62.973 68.421 0.00 0.00 39.32 5.19
811 812 4.057428 GACTGAGCCGTGGAGCGT 62.057 66.667 0.00 0.00 39.32 5.07
812 813 2.842394 ATTGACTGAGCCGTGGAGCG 62.842 60.000 0.00 0.00 38.01 5.03
813 814 1.078848 ATTGACTGAGCCGTGGAGC 60.079 57.895 0.00 0.00 0.00 4.70
814 815 0.247460 TGATTGACTGAGCCGTGGAG 59.753 55.000 0.00 0.00 0.00 3.86
815 816 0.247460 CTGATTGACTGAGCCGTGGA 59.753 55.000 0.00 0.00 0.00 4.02
816 817 0.247460 TCTGATTGACTGAGCCGTGG 59.753 55.000 0.00 0.00 0.00 4.94
817 818 2.200067 GATCTGATTGACTGAGCCGTG 58.800 52.381 0.00 0.00 0.00 4.94
818 819 1.137872 GGATCTGATTGACTGAGCCGT 59.862 52.381 0.00 0.00 41.56 5.68
885 886 0.835941 CACTCAGAGAGGGATTGGGG 59.164 60.000 3.79 0.00 34.53 4.96
903 904 3.071457 TCCTTTGACTGCTGATGAAGACA 59.929 43.478 0.00 0.00 0.00 3.41
905 906 3.580022 TCTCCTTTGACTGCTGATGAAGA 59.420 43.478 0.00 0.00 0.00 2.87
910 920 3.307339 GGAGTTCTCCTTTGACTGCTGAT 60.307 47.826 11.20 0.00 0.00 2.90
938 948 0.675633 ATGGCAAGGTGAAACACTGC 59.324 50.000 0.00 0.00 42.99 4.40
1099 1112 0.744771 GGGTTCTTGGATGCGAGGAC 60.745 60.000 4.25 4.25 0.00 3.85
1192 1205 2.439701 CTCTACGAGGGGTGGCGA 60.440 66.667 0.00 0.00 0.00 5.54
1206 1219 2.681778 CCGGAGACACTGGCCTCT 60.682 66.667 3.32 0.00 38.29 3.69
1638 1651 1.298859 CGGCCTTGAACGGGAAGAAG 61.299 60.000 0.00 0.00 0.00 2.85
2061 2074 1.640428 CTATCAAGCTCGTCGCCAAA 58.360 50.000 0.00 0.00 40.39 3.28
2107 2120 2.945008 TCAACTGCAAAGTGTCTTCCAG 59.055 45.455 0.00 0.00 0.00 3.86
2150 2163 0.588252 CAACTCCACACTTCCTTGCG 59.412 55.000 0.00 0.00 0.00 4.85
2173 2186 1.315690 CCATGATCACCACCAGCATC 58.684 55.000 0.00 0.00 0.00 3.91
2286 2302 1.153920 GTTTGCATAAACCCCGGCG 60.154 57.895 0.00 0.00 40.19 6.46
2333 2349 0.109153 CCGATGAATCCAGGCCATCA 59.891 55.000 5.01 1.19 37.20 3.07
2334 2350 0.109342 ACCGATGAATCCAGGCCATC 59.891 55.000 5.01 0.00 34.81 3.51
2461 2478 6.990341 TCAGCATGTATATATGACCATTGC 57.010 37.500 13.18 0.00 37.40 3.56
2497 2514 7.757097 ACATATTTAAGTACTCTGCACTTCG 57.243 36.000 0.00 0.00 37.42 3.79
2504 2522 9.712305 CCCCTGATTACATATTTAAGTACTCTG 57.288 37.037 0.00 0.00 0.00 3.35
2537 2555 8.839310 ATATTAGCAAAGGTACTGAGCATAAG 57.161 34.615 0.00 0.00 40.86 1.73
2539 2557 8.090831 CAGATATTAGCAAAGGTACTGAGCATA 58.909 37.037 0.00 0.00 40.86 3.14
2547 2565 4.448060 GCCGACAGATATTAGCAAAGGTAC 59.552 45.833 0.00 0.00 0.00 3.34
2549 2567 3.118408 TGCCGACAGATATTAGCAAAGGT 60.118 43.478 0.00 0.00 0.00 3.50
2554 2572 2.807967 GCAATGCCGACAGATATTAGCA 59.192 45.455 0.00 0.00 34.28 3.49
2564 2582 1.314534 CCCATTCAGCAATGCCGACA 61.315 55.000 0.00 0.00 38.53 4.35
2605 2623 5.585390 ACAATTGTGAGCACTTCAAGAAAG 58.415 37.500 11.07 0.00 37.61 2.62
2625 2643 7.047891 AGACTGAACTGTTGAACATAAGACAA 58.952 34.615 0.00 0.00 0.00 3.18
2631 2649 7.624360 AACAAAGACTGAACTGTTGAACATA 57.376 32.000 0.00 0.00 31.00 2.29
2646 2664 8.281212 ACATTTGAGTCAGTTAAACAAAGACT 57.719 30.769 0.00 0.00 41.84 3.24
2649 2667 7.857885 GGAGACATTTGAGTCAGTTAAACAAAG 59.142 37.037 0.00 0.00 40.98 2.77
2671 2689 9.201989 TCTATCTTTACTGCTAAGAATTGGAGA 57.798 33.333 0.00 0.00 35.43 3.71
2684 2702 9.846248 ACAAATCAACAATTCTATCTTTACTGC 57.154 29.630 0.00 0.00 0.00 4.40
2692 2710 8.125448 GGACTAGCACAAATCAACAATTCTATC 58.875 37.037 0.00 0.00 0.00 2.08
2696 2714 5.402398 GGGACTAGCACAAATCAACAATTC 58.598 41.667 0.00 0.00 0.00 2.17
2699 2717 3.153919 GGGGACTAGCACAAATCAACAA 58.846 45.455 0.00 0.00 0.00 2.83
2708 2726 5.486063 TGAAGTATAAAAGGGGACTAGCACA 59.514 40.000 0.00 0.00 42.68 4.57
2739 2757 4.997395 GGATGACACAAAGCAGAAAGTCTA 59.003 41.667 0.00 0.00 0.00 2.59
2757 2775 3.394274 TCTTCCTGTGGAAACAAGGATGA 59.606 43.478 0.53 0.00 46.06 2.92
2778 2796 5.675538 AGGAACACAGCAGTTATAAGGATC 58.324 41.667 0.00 0.00 0.00 3.36
2784 2802 5.483685 ACAGAAGGAACACAGCAGTTATA 57.516 39.130 0.00 0.00 0.00 0.98
2806 2824 9.772973 ACACATGCCGAACTTATCTAATTAATA 57.227 29.630 0.00 0.00 0.00 0.98
2818 2836 3.402628 ACTAGAACACATGCCGAACTT 57.597 42.857 0.00 0.00 0.00 2.66
2823 2841 5.106712 ACAAATGTTACTAGAACACATGCCG 60.107 40.000 0.00 0.00 31.37 5.69
2824 2842 6.086222 CACAAATGTTACTAGAACACATGCC 58.914 40.000 0.00 0.00 31.37 4.40
2838 2856 9.787435 ACTCTCCAACTTTATACACAAATGTTA 57.213 29.630 0.00 0.00 40.48 2.41
2867 2885 8.254508 ACTTTTGTTTGCAAGTTATAGAACCAA 58.745 29.630 0.00 0.00 36.08 3.67
2888 2906 7.259088 ACAGGTCCAGAGTATTCATACTTTT 57.741 36.000 0.97 0.00 43.27 2.27
2917 2935 2.563179 AGTACCTGTAGCTGTGTGGAAG 59.437 50.000 0.00 0.00 0.00 3.46
2971 2989 9.083422 AGCTGCAGATCTATTTACTCTATGTTA 57.917 33.333 20.43 0.00 0.00 2.41
2988 3006 2.005451 GACATTCAACGAGCTGCAGAT 58.995 47.619 20.43 12.64 0.00 2.90
2999 3017 5.437289 TGATGGTTGTCTTGACATTCAAC 57.563 39.130 4.18 5.93 39.24 3.18
3029 3047 6.237313 AGCCAGAAAATTTCTACGTTACAC 57.763 37.500 8.03 0.00 38.11 2.90
3043 3061 8.750515 TCATCAAATCACATATAGCCAGAAAA 57.249 30.769 0.00 0.00 0.00 2.29
3208 3251 7.070629 TGTCCTGTAGAAAATTTTAAAGGGGT 58.929 34.615 2.75 0.00 0.00 4.95
3272 3315 4.703575 AGAAGTGTGTGATTGCATTATGCT 59.296 37.500 18.44 0.00 45.31 3.79
3302 3353 5.485209 TCCAGAAAAGAGGTAGAGGAAAC 57.515 43.478 0.00 0.00 0.00 2.78
3341 3392 6.807230 ACAAACTATACAGCGTCTGTTTAGAG 59.193 38.462 27.06 21.11 42.59 2.43
3377 3428 7.841915 TGCATAACTGAAACTGATAAATCGA 57.158 32.000 0.00 0.00 0.00 3.59
3472 3523 4.636648 TCACACACGTAATGACAAAAAGGT 59.363 37.500 6.02 0.00 0.00 3.50
3673 3726 3.415212 CTGGAGGATGAAGAAGCAAACA 58.585 45.455 0.00 0.00 0.00 2.83
3739 3792 5.049680 GCAACGATGAAAAGTACCAAGAGAA 60.050 40.000 0.00 0.00 0.00 2.87
3800 3853 4.311816 AGAAAACAAATGTGCACCTCAG 57.688 40.909 15.69 4.62 0.00 3.35
3807 3860 7.756722 AGCTGTATGATAAGAAAACAAATGTGC 59.243 33.333 0.00 0.00 0.00 4.57
3912 3965 4.523813 ACTTCACGATTTTAGTTTGCACG 58.476 39.130 0.00 0.00 0.00 5.34
3920 3973 8.788813 GTTGCAATGATAACTTCACGATTTTAG 58.211 33.333 0.59 0.00 37.11 1.85
4074 4127 5.175859 CGTGTGGATAATTCAGTAAGTGGT 58.824 41.667 0.00 0.00 0.00 4.16
4083 4136 2.499693 TCTCTGCCGTGTGGATAATTCA 59.500 45.455 0.00 0.00 37.49 2.57
4237 4291 8.786898 TCCTAAATGAATCAAAGTTGTCAGAAG 58.213 33.333 0.00 0.00 0.00 2.85
4562 4700 3.706594 TGGCCAAAATGGTAAGTTTGTCA 59.293 39.130 0.61 0.00 39.22 3.58
4565 4703 4.640364 ACATGGCCAAAATGGTAAGTTTG 58.360 39.130 10.96 0.01 40.46 2.93
4571 4709 3.197333 CCATCAACATGGCCAAAATGGTA 59.803 43.478 10.96 0.00 43.55 3.25
4608 4746 5.893500 TCACCCTACCAAAATTTCATACCA 58.106 37.500 0.00 0.00 0.00 3.25
4739 4877 2.289444 TGTAGTACAAGCTTGGTGAGGC 60.289 50.000 29.18 14.91 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.