Multiple sequence alignment - TraesCS4A01G055200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G055200 chr4A 100.000 2366 0 0 1 2366 46214300 46216665 0.000000e+00 4370.0
1 TraesCS4A01G055200 chr4B 87.167 1278 108 30 777 2026 515066601 515065352 0.000000e+00 1400.0
2 TraesCS4A01G055200 chr5B 98.579 774 11 0 1 774 662060600 662059827 0.000000e+00 1369.0
3 TraesCS4A01G055200 chr2A 98.579 774 11 0 1 774 672822065 672822838 0.000000e+00 1369.0
4 TraesCS4A01G055200 chr2A 98.065 775 13 2 1 774 675483466 675482693 0.000000e+00 1347.0
5 TraesCS4A01G055200 chr6B 97.933 774 11 3 1 774 299093233 299092465 0.000000e+00 1336.0
6 TraesCS4A01G055200 chr6B 97.545 774 17 2 1 774 370666116 370665345 0.000000e+00 1323.0
7 TraesCS4A01G055200 chr2B 97.806 775 15 2 1 774 587101454 587102227 0.000000e+00 1336.0
8 TraesCS4A01G055200 chr1A 97.806 775 16 1 1 774 57690737 57689963 0.000000e+00 1336.0
9 TraesCS4A01G055200 chr1A 96.377 138 5 0 2226 2363 263857111 263857248 6.580000e-56 228.0
10 TraesCS4A01G055200 chr1A 96.992 133 3 1 2235 2366 404855109 404854977 3.060000e-54 222.0
11 TraesCS4A01G055200 chr3B 97.419 775 18 2 1 774 737775891 737775118 0.000000e+00 1319.0
12 TraesCS4A01G055200 chr3A 97.419 775 18 2 1 774 521945316 521946089 0.000000e+00 1319.0
13 TraesCS4A01G055200 chr3A 97.761 134 3 0 2233 2366 61406110 61405977 5.090000e-57 231.0
14 TraesCS4A01G055200 chr3A 97.727 132 3 0 2235 2366 535564865 535564734 6.580000e-56 228.0
15 TraesCS4A01G055200 chr3A 96.970 132 4 0 2235 2366 621957559 621957428 3.060000e-54 222.0
16 TraesCS4A01G055200 chr4D 90.416 793 52 11 896 1673 418850702 418851485 0.000000e+00 1022.0
17 TraesCS4A01G055200 chr4D 93.220 59 4 0 800 858 418850642 418850700 1.160000e-13 87.9
18 TraesCS4A01G055200 chr6A 97.122 139 3 1 2225 2363 457033845 457033982 1.410000e-57 233.0
19 TraesCS4A01G055200 chr7A 97.744 133 3 0 2231 2363 121308668 121308800 1.830000e-56 230.0
20 TraesCS4A01G055200 chr7A 97.744 133 3 0 2234 2366 667600672 667600540 1.830000e-56 230.0
21 TraesCS4A01G055200 chr5A 95.172 145 5 2 2223 2366 298567977 298567834 6.580000e-56 228.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G055200 chr4A 46214300 46216665 2365 False 4370.00 4370 100.000 1 2366 1 chr4A.!!$F1 2365
1 TraesCS4A01G055200 chr4B 515065352 515066601 1249 True 1400.00 1400 87.167 777 2026 1 chr4B.!!$R1 1249
2 TraesCS4A01G055200 chr5B 662059827 662060600 773 True 1369.00 1369 98.579 1 774 1 chr5B.!!$R1 773
3 TraesCS4A01G055200 chr2A 672822065 672822838 773 False 1369.00 1369 98.579 1 774 1 chr2A.!!$F1 773
4 TraesCS4A01G055200 chr2A 675482693 675483466 773 True 1347.00 1347 98.065 1 774 1 chr2A.!!$R1 773
5 TraesCS4A01G055200 chr6B 299092465 299093233 768 True 1336.00 1336 97.933 1 774 1 chr6B.!!$R1 773
6 TraesCS4A01G055200 chr6B 370665345 370666116 771 True 1323.00 1323 97.545 1 774 1 chr6B.!!$R2 773
7 TraesCS4A01G055200 chr2B 587101454 587102227 773 False 1336.00 1336 97.806 1 774 1 chr2B.!!$F1 773
8 TraesCS4A01G055200 chr1A 57689963 57690737 774 True 1336.00 1336 97.806 1 774 1 chr1A.!!$R1 773
9 TraesCS4A01G055200 chr3B 737775118 737775891 773 True 1319.00 1319 97.419 1 774 1 chr3B.!!$R1 773
10 TraesCS4A01G055200 chr3A 521945316 521946089 773 False 1319.00 1319 97.419 1 774 1 chr3A.!!$F1 773
11 TraesCS4A01G055200 chr4D 418850642 418851485 843 False 554.95 1022 91.818 800 1673 2 chr4D.!!$F1 873

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
862 869 0.249741 ACGTGGGACTCCAACGAAAG 60.25 55.0 28.55 3.08 46.04 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2048 2096 0.036875 CCCCGAGCTCTCCTTTTGTT 59.963 55.0 12.85 0.0 0.0 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
683 690 8.816894 TCACTAATTATCAAGAAGTGTTCTCCT 58.183 33.333 0.00 0.00 39.61 3.69
746 753 2.628178 ACGTGATGATCGGGTGTGATAT 59.372 45.455 0.00 0.00 0.00 1.63
774 781 2.657184 GTTCAAATACAACGGGTGCAC 58.343 47.619 8.80 8.80 0.00 4.57
775 782 0.869068 TCAAATACAACGGGTGCACG 59.131 50.000 11.45 2.44 40.31 5.34
788 795 2.550606 GGGTGCACGACAAATTCTGTTA 59.449 45.455 11.45 0.00 38.84 2.41
791 798 4.083537 GGTGCACGACAAATTCTGTTATCA 60.084 41.667 11.45 0.00 38.84 2.15
795 802 6.636447 TGCACGACAAATTCTGTTATCAAAAG 59.364 34.615 0.00 0.00 38.84 2.27
841 848 4.142902 CGTACATGACATCCAAGTTTCCAC 60.143 45.833 0.00 0.00 0.00 4.02
846 853 3.070446 TGACATCCAAGTTTCCACTACGT 59.930 43.478 0.00 0.00 30.68 3.57
859 866 0.538057 ACTACGTGGGACTCCAACGA 60.538 55.000 28.55 12.93 46.04 3.85
862 869 0.249741 ACGTGGGACTCCAACGAAAG 60.250 55.000 28.55 3.08 46.04 2.62
863 870 1.566018 CGTGGGACTCCAACGAAAGC 61.566 60.000 19.00 0.00 46.04 3.51
864 871 0.534203 GTGGGACTCCAACGAAAGCA 60.534 55.000 0.00 0.00 46.04 3.91
918 935 5.860941 TTATCGCTCTTCCTTTCTCTCAT 57.139 39.130 0.00 0.00 0.00 2.90
919 936 3.791973 TCGCTCTTCCTTTCTCTCATC 57.208 47.619 0.00 0.00 0.00 2.92
920 937 3.360867 TCGCTCTTCCTTTCTCTCATCT 58.639 45.455 0.00 0.00 0.00 2.90
921 938 3.380004 TCGCTCTTCCTTTCTCTCATCTC 59.620 47.826 0.00 0.00 0.00 2.75
922 939 3.130164 CGCTCTTCCTTTCTCTCATCTCA 59.870 47.826 0.00 0.00 0.00 3.27
974 997 1.185315 CCAACAACACCCCATCCATC 58.815 55.000 0.00 0.00 0.00 3.51
975 998 1.272648 CCAACAACACCCCATCCATCT 60.273 52.381 0.00 0.00 0.00 2.90
976 999 2.025416 CCAACAACACCCCATCCATCTA 60.025 50.000 0.00 0.00 0.00 1.98
977 1000 3.016736 CAACAACACCCCATCCATCTAC 58.983 50.000 0.00 0.00 0.00 2.59
1003 1026 9.615067 CTTGAAAAGGACGAGAGTTGAGAATGC 62.615 44.444 0.00 0.00 40.81 3.56
1126 1149 0.248784 ATACGAGTCGCTTAACGCCC 60.249 55.000 13.59 0.00 43.23 6.13
1257 1280 2.541120 GCTGCGCATCCTCATGGAC 61.541 63.158 12.24 0.00 46.51 4.02
1258 1281 1.153309 CTGCGCATCCTCATGGACA 60.153 57.895 12.24 0.00 46.51 4.02
1278 1301 1.116308 GGAGAGTGACTAAGGAGGGC 58.884 60.000 0.00 0.00 0.00 5.19
1284 1307 1.255667 TGACTAAGGAGGGCGTGGTC 61.256 60.000 0.00 0.00 0.00 4.02
1299 1322 2.759795 GTCAAGGGCAGCCTCCTT 59.240 61.111 12.43 4.04 44.76 3.36
1324 1347 3.248266 GACATGTCCAGATGCAAAAAGC 58.752 45.455 15.31 0.00 45.96 3.51
1408 1431 1.518774 CGGTACCATTACTGCCCGT 59.481 57.895 13.54 0.00 0.00 5.28
1411 1434 0.529119 GTACCATTACTGCCCGTCCG 60.529 60.000 0.00 0.00 0.00 4.79
1421 1448 1.004918 GCCCGTCCGAATATCCTGG 60.005 63.158 0.00 0.00 0.00 4.45
1422 1449 1.469335 GCCCGTCCGAATATCCTGGA 61.469 60.000 0.00 0.00 0.00 3.86
1423 1450 0.317479 CCCGTCCGAATATCCTGGAC 59.683 60.000 0.00 9.74 46.91 4.02
1426 1453 2.821991 GTCCGAATATCCTGGACCTG 57.178 55.000 0.00 0.00 45.14 4.00
1470 1501 1.927931 GCTCGAGCGTGAATAAGCC 59.072 57.895 23.61 0.00 31.15 4.35
1490 1521 0.460109 TGTTGCTCGATCCATGGACG 60.460 55.000 18.99 21.47 0.00 4.79
1508 1539 3.612860 GGACGAATCGCATATGTGTATCC 59.387 47.826 15.62 11.97 0.00 2.59
1575 1606 8.567285 AGGATGATGTTAGTCTTTTGTTAAGG 57.433 34.615 0.00 0.00 0.00 2.69
1580 1611 6.687081 TGTTAGTCTTTTGTTAAGGTGTGG 57.313 37.500 0.00 0.00 0.00 4.17
1581 1612 6.416415 TGTTAGTCTTTTGTTAAGGTGTGGA 58.584 36.000 0.00 0.00 0.00 4.02
1657 1696 0.966920 GTTTCCCCAGAGTGTCTCGA 59.033 55.000 0.00 0.00 35.36 4.04
1675 1714 3.367321 TCGATTGAGTGTGTATGGGGTA 58.633 45.455 0.00 0.00 0.00 3.69
1723 1764 3.273834 ACGTCGTTTGGTTGCCCG 61.274 61.111 0.00 0.00 0.00 6.13
1727 1768 2.196925 TCGTTTGGTTGCCCGCAAT 61.197 52.632 5.25 0.00 38.28 3.56
1733 1774 2.560119 GGTTGCCCGCAATGTCACA 61.560 57.895 5.25 0.00 38.28 3.58
1754 1795 6.420903 TCACAAGTTACATGAGAGAAGAAACG 59.579 38.462 0.00 0.00 0.00 3.60
1756 1797 4.246458 AGTTACATGAGAGAAGAAACGCC 58.754 43.478 0.00 0.00 0.00 5.68
1762 1803 0.394565 AGAGAAGAAACGCCAGCACT 59.605 50.000 0.00 0.00 0.00 4.40
1774 1815 0.040425 CCAGCACTGCGTTTGGTTAC 60.040 55.000 0.00 0.00 0.00 2.50
1775 1816 0.944386 CAGCACTGCGTTTGGTTACT 59.056 50.000 0.00 0.00 0.00 2.24
1798 1839 1.908344 TTGTGCTGCCTAGATGCAAA 58.092 45.000 0.00 0.00 41.51 3.68
1799 1840 1.456296 TGTGCTGCCTAGATGCAAAG 58.544 50.000 0.00 0.00 41.51 2.77
1811 1852 5.691754 CCTAGATGCAAAGTTTGGTTGTTTC 59.308 40.000 17.11 0.00 0.00 2.78
1812 1853 4.441792 AGATGCAAAGTTTGGTTGTTTCC 58.558 39.130 17.11 0.00 0.00 3.13
1829 1870 7.298122 GTTGTTTCCTTATGTGTACACTGATG 58.702 38.462 25.60 14.71 0.00 3.07
1830 1871 6.764379 TGTTTCCTTATGTGTACACTGATGA 58.236 36.000 25.60 13.15 0.00 2.92
1831 1872 7.394016 TGTTTCCTTATGTGTACACTGATGAT 58.606 34.615 25.60 13.31 0.00 2.45
1832 1873 7.882791 TGTTTCCTTATGTGTACACTGATGATT 59.117 33.333 25.60 5.76 0.00 2.57
1846 1887 6.212388 ACACTGATGATTACTCTCACCTCTTT 59.788 38.462 0.00 0.00 0.00 2.52
1848 1889 7.605691 CACTGATGATTACTCTCACCTCTTTTT 59.394 37.037 0.00 0.00 0.00 1.94
1869 1913 7.408756 TTTTTGCATGGTGAGCTTATCTTAT 57.591 32.000 0.00 0.00 0.00 1.73
1870 1914 7.408756 TTTTGCATGGTGAGCTTATCTTATT 57.591 32.000 0.00 0.00 0.00 1.40
1875 1919 7.137426 GCATGGTGAGCTTATCTTATTGAAAG 58.863 38.462 0.00 0.00 0.00 2.62
1878 1922 7.050377 TGGTGAGCTTATCTTATTGAAAGAGG 58.950 38.462 0.00 0.00 0.00 3.69
1879 1923 6.017523 GGTGAGCTTATCTTATTGAAAGAGGC 60.018 42.308 0.00 0.00 0.00 4.70
1885 1929 7.201652 GCTTATCTTATTGAAAGAGGCTTTCGT 60.202 37.037 13.37 8.44 0.00 3.85
1887 1931 4.935808 TCTTATTGAAAGAGGCTTTCGTCC 59.064 41.667 13.37 0.00 0.00 4.79
1888 1932 2.930826 TTGAAAGAGGCTTTCGTCCT 57.069 45.000 13.37 0.00 36.46 3.85
1889 1933 4.553330 ATTGAAAGAGGCTTTCGTCCTA 57.447 40.909 13.37 0.00 33.24 2.94
1894 1942 5.011329 TGAAAGAGGCTTTCGTCCTACTTTA 59.989 40.000 13.37 0.00 34.41 1.85
1897 1945 6.146601 AGAGGCTTTCGTCCTACTTTATAC 57.853 41.667 0.00 0.00 33.24 1.47
1917 1965 2.625790 ACATAAAGCAAAGCCCGAACAA 59.374 40.909 0.00 0.00 0.00 2.83
1919 1967 0.820871 AAAGCAAAGCCCGAACAACA 59.179 45.000 0.00 0.00 0.00 3.33
1927 1975 2.159382 AGCCCGAACAACATACAAAGG 58.841 47.619 0.00 0.00 0.00 3.11
1938 1986 3.585862 ACATACAAAGGTAGCTCACACG 58.414 45.455 0.00 0.00 31.88 4.49
1950 1998 2.515991 CACACGCACACCAACCCT 60.516 61.111 0.00 0.00 0.00 4.34
1951 1999 2.515991 ACACGCACACCAACCCTG 60.516 61.111 0.00 0.00 0.00 4.45
1952 2000 3.964875 CACGCACACCAACCCTGC 61.965 66.667 0.00 0.00 0.00 4.85
1990 2038 9.110502 GCTTTACAATATAAGTACAAAGAGGCT 57.889 33.333 0.00 0.00 0.00 4.58
2014 2062 7.201652 GCTAAAAGCCAGAGACCTTATAAACAG 60.202 40.741 0.00 0.00 34.48 3.16
2018 2066 6.174049 AGCCAGAGACCTTATAAACAGAAAC 58.826 40.000 0.00 0.00 0.00 2.78
2026 2074 6.745116 ACCTTATAAACAGAAACCAAGCAAC 58.255 36.000 0.00 0.00 0.00 4.17
2027 2075 6.322712 ACCTTATAAACAGAAACCAAGCAACA 59.677 34.615 0.00 0.00 0.00 3.33
2028 2076 6.640907 CCTTATAAACAGAAACCAAGCAACAC 59.359 38.462 0.00 0.00 0.00 3.32
2029 2077 5.852282 ATAAACAGAAACCAAGCAACACT 57.148 34.783 0.00 0.00 0.00 3.55
2030 2078 3.782889 AACAGAAACCAAGCAACACTC 57.217 42.857 0.00 0.00 0.00 3.51
2031 2079 1.670811 ACAGAAACCAAGCAACACTCG 59.329 47.619 0.00 0.00 0.00 4.18
2032 2080 0.663153 AGAAACCAAGCAACACTCGC 59.337 50.000 0.00 0.00 0.00 5.03
2033 2081 0.663153 GAAACCAAGCAACACTCGCT 59.337 50.000 0.00 0.00 42.98 4.93
2034 2082 1.871039 GAAACCAAGCAACACTCGCTA 59.129 47.619 0.00 0.00 39.29 4.26
2035 2083 1.961793 AACCAAGCAACACTCGCTAA 58.038 45.000 0.00 0.00 39.29 3.09
2036 2084 1.961793 ACCAAGCAACACTCGCTAAA 58.038 45.000 0.00 0.00 39.29 1.85
2037 2085 1.602377 ACCAAGCAACACTCGCTAAAC 59.398 47.619 0.00 0.00 39.29 2.01
2038 2086 1.873591 CCAAGCAACACTCGCTAAACT 59.126 47.619 0.00 0.00 39.29 2.66
2039 2087 3.064207 CCAAGCAACACTCGCTAAACTA 58.936 45.455 0.00 0.00 39.29 2.24
2040 2088 3.496884 CCAAGCAACACTCGCTAAACTAA 59.503 43.478 0.00 0.00 39.29 2.24
2041 2089 4.377431 CCAAGCAACACTCGCTAAACTAAG 60.377 45.833 0.00 0.00 39.29 2.18
2042 2090 4.252971 AGCAACACTCGCTAAACTAAGA 57.747 40.909 0.00 0.00 38.15 2.10
2043 2091 4.628074 AGCAACACTCGCTAAACTAAGAA 58.372 39.130 0.00 0.00 38.15 2.52
2044 2092 4.448060 AGCAACACTCGCTAAACTAAGAAC 59.552 41.667 0.00 0.00 38.15 3.01
2045 2093 4.663389 GCAACACTCGCTAAACTAAGAACG 60.663 45.833 0.00 0.00 0.00 3.95
2046 2094 3.572584 ACACTCGCTAAACTAAGAACGG 58.427 45.455 0.00 0.00 0.00 4.44
2047 2095 2.921754 CACTCGCTAAACTAAGAACGGG 59.078 50.000 0.00 0.00 0.00 5.28
2048 2096 2.821969 ACTCGCTAAACTAAGAACGGGA 59.178 45.455 0.00 0.00 0.00 5.14
2049 2097 3.256631 ACTCGCTAAACTAAGAACGGGAA 59.743 43.478 0.00 0.00 0.00 3.97
2050 2098 3.578688 TCGCTAAACTAAGAACGGGAAC 58.421 45.455 0.00 0.00 0.00 3.62
2051 2099 3.005684 TCGCTAAACTAAGAACGGGAACA 59.994 43.478 0.00 0.00 0.00 3.18
2052 2100 3.742369 CGCTAAACTAAGAACGGGAACAA 59.258 43.478 0.00 0.00 0.00 2.83
2053 2101 4.211794 CGCTAAACTAAGAACGGGAACAAA 59.788 41.667 0.00 0.00 0.00 2.83
2054 2102 5.277442 CGCTAAACTAAGAACGGGAACAAAA 60.277 40.000 0.00 0.00 0.00 2.44
2055 2103 6.140786 GCTAAACTAAGAACGGGAACAAAAG 58.859 40.000 0.00 0.00 0.00 2.27
2056 2104 5.509716 AAACTAAGAACGGGAACAAAAGG 57.490 39.130 0.00 0.00 0.00 3.11
2057 2105 4.426736 ACTAAGAACGGGAACAAAAGGA 57.573 40.909 0.00 0.00 0.00 3.36
2058 2106 4.386711 ACTAAGAACGGGAACAAAAGGAG 58.613 43.478 0.00 0.00 0.00 3.69
2059 2107 3.570912 AAGAACGGGAACAAAAGGAGA 57.429 42.857 0.00 0.00 0.00 3.71
2060 2108 3.127425 AGAACGGGAACAAAAGGAGAG 57.873 47.619 0.00 0.00 0.00 3.20
2061 2109 1.535896 GAACGGGAACAAAAGGAGAGC 59.464 52.381 0.00 0.00 0.00 4.09
2062 2110 0.765510 ACGGGAACAAAAGGAGAGCT 59.234 50.000 0.00 0.00 0.00 4.09
2063 2111 1.270893 ACGGGAACAAAAGGAGAGCTC 60.271 52.381 5.27 5.27 0.00 4.09
2064 2112 1.443802 GGGAACAAAAGGAGAGCTCG 58.556 55.000 8.37 0.00 0.00 5.03
2065 2113 1.443802 GGAACAAAAGGAGAGCTCGG 58.556 55.000 8.37 0.00 0.00 4.63
2066 2114 1.443802 GAACAAAAGGAGAGCTCGGG 58.556 55.000 8.37 0.00 0.00 5.14
2067 2115 0.036875 AACAAAAGGAGAGCTCGGGG 59.963 55.000 8.37 0.00 0.00 5.73
2068 2116 1.746991 CAAAAGGAGAGCTCGGGGC 60.747 63.158 8.37 0.00 42.19 5.80
2069 2117 2.224159 AAAAGGAGAGCTCGGGGCA 61.224 57.895 8.37 0.00 44.79 5.36
2070 2118 2.470938 AAAAGGAGAGCTCGGGGCAC 62.471 60.000 8.37 0.00 44.79 5.01
2082 2130 3.081409 GGGCACCGCTCCTAAGGA 61.081 66.667 0.00 0.00 40.86 3.36
2083 2131 3.095347 GGGCACCGCTCCTAAGGAG 62.095 68.421 0.00 0.00 46.76 3.69
2094 2142 3.984508 TCCTAAGGAGAATACGAAGCG 57.015 47.619 0.00 0.00 0.00 4.68
2095 2143 3.548770 TCCTAAGGAGAATACGAAGCGA 58.451 45.455 0.00 0.00 0.00 4.93
2096 2144 3.314635 TCCTAAGGAGAATACGAAGCGAC 59.685 47.826 0.00 0.00 0.00 5.19
2097 2145 2.190325 AAGGAGAATACGAAGCGACG 57.810 50.000 0.00 4.25 39.31 5.12
2098 2146 1.376543 AGGAGAATACGAAGCGACGA 58.623 50.000 11.93 0.00 37.03 4.20
2099 2147 1.948145 AGGAGAATACGAAGCGACGAT 59.052 47.619 11.93 0.00 37.03 3.73
2100 2148 2.031857 AGGAGAATACGAAGCGACGATC 60.032 50.000 11.93 0.00 37.03 3.69
2101 2149 2.308811 GAGAATACGAAGCGACGATCC 58.691 52.381 11.93 0.00 37.03 3.36
2102 2150 1.674441 AGAATACGAAGCGACGATCCA 59.326 47.619 11.93 0.00 37.03 3.41
2103 2151 2.044860 GAATACGAAGCGACGATCCAG 58.955 52.381 11.93 0.00 37.03 3.86
2104 2152 0.311165 ATACGAAGCGACGATCCAGG 59.689 55.000 11.93 0.00 37.03 4.45
2105 2153 1.028330 TACGAAGCGACGATCCAGGT 61.028 55.000 11.93 0.00 37.03 4.00
2106 2154 1.153823 CGAAGCGACGATCCAGGTT 60.154 57.895 0.00 0.00 35.09 3.50
2107 2155 1.413767 CGAAGCGACGATCCAGGTTG 61.414 60.000 0.00 0.00 35.09 3.77
2108 2156 0.389948 GAAGCGACGATCCAGGTTGT 60.390 55.000 0.00 0.00 0.00 3.32
2109 2157 0.892755 AAGCGACGATCCAGGTTGTA 59.107 50.000 0.00 0.00 0.00 2.41
2110 2158 0.172803 AGCGACGATCCAGGTTGTAC 59.827 55.000 0.00 0.00 0.00 2.90
2111 2159 0.108992 GCGACGATCCAGGTTGTACA 60.109 55.000 0.00 0.00 0.00 2.90
2112 2160 1.670674 GCGACGATCCAGGTTGTACAA 60.671 52.381 3.59 3.59 0.00 2.41
2113 2161 2.259618 CGACGATCCAGGTTGTACAAG 58.740 52.381 8.98 0.00 0.00 3.16
2114 2162 2.618053 GACGATCCAGGTTGTACAAGG 58.382 52.381 8.98 7.30 0.00 3.61
2115 2163 2.232941 GACGATCCAGGTTGTACAAGGA 59.767 50.000 15.25 15.25 0.00 3.36
2116 2164 2.635915 ACGATCCAGGTTGTACAAGGAA 59.364 45.455 16.47 3.93 31.17 3.36
2117 2165 3.262420 CGATCCAGGTTGTACAAGGAAG 58.738 50.000 16.47 11.12 31.17 3.46
2118 2166 3.306780 CGATCCAGGTTGTACAAGGAAGT 60.307 47.826 16.47 4.21 31.17 3.01
2119 2167 3.485463 TCCAGGTTGTACAAGGAAGTG 57.515 47.619 8.98 2.43 0.00 3.16
2120 2168 2.105821 TCCAGGTTGTACAAGGAAGTGG 59.894 50.000 8.98 11.16 0.00 4.00
2121 2169 2.158667 CCAGGTTGTACAAGGAAGTGGT 60.159 50.000 8.98 0.00 0.00 4.16
2122 2170 3.071892 CCAGGTTGTACAAGGAAGTGGTA 59.928 47.826 8.98 0.00 0.00 3.25
2123 2171 4.315803 CAGGTTGTACAAGGAAGTGGTAG 58.684 47.826 8.98 0.00 0.00 3.18
2124 2172 3.971971 AGGTTGTACAAGGAAGTGGTAGT 59.028 43.478 8.98 0.00 0.00 2.73
2125 2173 4.411212 AGGTTGTACAAGGAAGTGGTAGTT 59.589 41.667 8.98 0.00 0.00 2.24
2126 2174 5.104235 AGGTTGTACAAGGAAGTGGTAGTTT 60.104 40.000 8.98 0.00 0.00 2.66
2127 2175 5.008316 GGTTGTACAAGGAAGTGGTAGTTTG 59.992 44.000 8.98 0.00 0.00 2.93
2128 2176 5.617528 TGTACAAGGAAGTGGTAGTTTGA 57.382 39.130 0.00 0.00 0.00 2.69
2129 2177 5.991861 TGTACAAGGAAGTGGTAGTTTGAA 58.008 37.500 0.00 0.00 0.00 2.69
2130 2178 6.053005 TGTACAAGGAAGTGGTAGTTTGAAG 58.947 40.000 0.00 0.00 0.00 3.02
2131 2179 4.461198 ACAAGGAAGTGGTAGTTTGAAGG 58.539 43.478 0.00 0.00 0.00 3.46
2132 2180 4.165372 ACAAGGAAGTGGTAGTTTGAAGGA 59.835 41.667 0.00 0.00 0.00 3.36
2133 2181 4.625607 AGGAAGTGGTAGTTTGAAGGAG 57.374 45.455 0.00 0.00 0.00 3.69
2134 2182 3.328050 AGGAAGTGGTAGTTTGAAGGAGG 59.672 47.826 0.00 0.00 0.00 4.30
2135 2183 3.326880 GGAAGTGGTAGTTTGAAGGAGGA 59.673 47.826 0.00 0.00 0.00 3.71
2136 2184 4.563786 GGAAGTGGTAGTTTGAAGGAGGAG 60.564 50.000 0.00 0.00 0.00 3.69
2137 2185 3.858135 AGTGGTAGTTTGAAGGAGGAGA 58.142 45.455 0.00 0.00 0.00 3.71
2138 2186 3.835395 AGTGGTAGTTTGAAGGAGGAGAG 59.165 47.826 0.00 0.00 0.00 3.20
2139 2187 3.055747 GTGGTAGTTTGAAGGAGGAGAGG 60.056 52.174 0.00 0.00 0.00 3.69
2140 2188 2.093394 GGTAGTTTGAAGGAGGAGAGGC 60.093 54.545 0.00 0.00 0.00 4.70
2141 2189 1.734655 AGTTTGAAGGAGGAGAGGCA 58.265 50.000 0.00 0.00 0.00 4.75
2142 2190 2.057922 AGTTTGAAGGAGGAGAGGCAA 58.942 47.619 0.00 0.00 0.00 4.52
2143 2191 2.443255 AGTTTGAAGGAGGAGAGGCAAA 59.557 45.455 0.00 0.00 0.00 3.68
2144 2192 3.075134 AGTTTGAAGGAGGAGAGGCAAAT 59.925 43.478 0.00 0.00 0.00 2.32
2145 2193 4.289672 AGTTTGAAGGAGGAGAGGCAAATA 59.710 41.667 0.00 0.00 0.00 1.40
2146 2194 4.927267 TTGAAGGAGGAGAGGCAAATAA 57.073 40.909 0.00 0.00 0.00 1.40
2147 2195 4.927267 TGAAGGAGGAGAGGCAAATAAA 57.073 40.909 0.00 0.00 0.00 1.40
2148 2196 5.255397 TGAAGGAGGAGAGGCAAATAAAA 57.745 39.130 0.00 0.00 0.00 1.52
2149 2197 5.831103 TGAAGGAGGAGAGGCAAATAAAAT 58.169 37.500 0.00 0.00 0.00 1.82
2150 2198 5.653769 TGAAGGAGGAGAGGCAAATAAAATG 59.346 40.000 0.00 0.00 0.00 2.32
2151 2199 5.456921 AGGAGGAGAGGCAAATAAAATGA 57.543 39.130 0.00 0.00 0.00 2.57
2152 2200 5.196695 AGGAGGAGAGGCAAATAAAATGAC 58.803 41.667 0.00 0.00 0.00 3.06
2153 2201 4.949856 GGAGGAGAGGCAAATAAAATGACA 59.050 41.667 0.00 0.00 0.00 3.58
2154 2202 5.595952 GGAGGAGAGGCAAATAAAATGACAT 59.404 40.000 0.00 0.00 0.00 3.06
2155 2203 6.238869 GGAGGAGAGGCAAATAAAATGACATC 60.239 42.308 0.00 0.00 0.00 3.06
2156 2204 6.430007 AGGAGAGGCAAATAAAATGACATCT 58.570 36.000 0.00 0.00 0.00 2.90
2157 2205 6.545298 AGGAGAGGCAAATAAAATGACATCTC 59.455 38.462 0.00 0.00 34.29 2.75
2158 2206 6.238869 GGAGAGGCAAATAAAATGACATCTCC 60.239 42.308 5.85 5.85 40.73 3.71
2159 2207 6.189859 AGAGGCAAATAAAATGACATCTCCA 58.810 36.000 0.00 0.00 0.00 3.86
2160 2208 6.664816 AGAGGCAAATAAAATGACATCTCCAA 59.335 34.615 0.00 0.00 0.00 3.53
2161 2209 6.870769 AGGCAAATAAAATGACATCTCCAAG 58.129 36.000 0.00 0.00 0.00 3.61
2162 2210 6.044682 GGCAAATAAAATGACATCTCCAAGG 58.955 40.000 0.00 0.00 0.00 3.61
2163 2211 6.127366 GGCAAATAAAATGACATCTCCAAGGA 60.127 38.462 0.00 0.00 0.00 3.36
2164 2212 6.976925 GCAAATAAAATGACATCTCCAAGGAG 59.023 38.462 9.90 9.90 43.21 3.69
2173 2221 2.011122 TCTCCAAGGAGAAGAACGGT 57.989 50.000 16.19 0.00 46.89 4.83
2174 2222 3.165087 TCTCCAAGGAGAAGAACGGTA 57.835 47.619 16.19 0.00 46.89 4.02
2175 2223 3.709587 TCTCCAAGGAGAAGAACGGTAT 58.290 45.455 16.19 0.00 46.89 2.73
2176 2224 3.700038 TCTCCAAGGAGAAGAACGGTATC 59.300 47.826 16.19 0.00 46.89 2.24
2177 2225 2.764572 TCCAAGGAGAAGAACGGTATCC 59.235 50.000 0.00 0.00 0.00 2.59
2178 2226 2.500098 CCAAGGAGAAGAACGGTATCCA 59.500 50.000 0.00 0.00 32.21 3.41
2179 2227 3.134804 CCAAGGAGAAGAACGGTATCCAT 59.865 47.826 0.00 0.00 32.21 3.41
2180 2228 4.122776 CAAGGAGAAGAACGGTATCCATG 58.877 47.826 0.00 0.00 32.21 3.66
2181 2229 3.643237 AGGAGAAGAACGGTATCCATGA 58.357 45.455 0.00 0.00 32.21 3.07
2182 2230 4.030913 AGGAGAAGAACGGTATCCATGAA 58.969 43.478 0.00 0.00 32.21 2.57
2183 2231 4.120589 GGAGAAGAACGGTATCCATGAAC 58.879 47.826 0.00 0.00 0.00 3.18
2184 2232 4.382685 GGAGAAGAACGGTATCCATGAACA 60.383 45.833 0.00 0.00 0.00 3.18
2185 2233 5.359194 AGAAGAACGGTATCCATGAACAT 57.641 39.130 0.00 0.00 0.00 2.71
2186 2234 5.360591 AGAAGAACGGTATCCATGAACATC 58.639 41.667 0.00 0.00 0.00 3.06
2187 2235 4.753516 AGAACGGTATCCATGAACATCA 57.246 40.909 0.00 0.00 0.00 3.07
2188 2236 5.296151 AGAACGGTATCCATGAACATCAT 57.704 39.130 0.00 0.00 37.65 2.45
2189 2237 5.300752 AGAACGGTATCCATGAACATCATC 58.699 41.667 0.00 0.00 34.28 2.92
2190 2238 3.653344 ACGGTATCCATGAACATCATCG 58.347 45.455 0.00 0.00 34.28 3.84
2191 2239 3.069586 ACGGTATCCATGAACATCATCGT 59.930 43.478 0.00 0.00 34.28 3.73
2192 2240 3.675225 CGGTATCCATGAACATCATCGTC 59.325 47.826 0.00 0.00 34.28 4.20
2193 2241 3.675225 GGTATCCATGAACATCATCGTCG 59.325 47.826 0.00 0.00 34.28 5.12
2194 2242 3.733443 ATCCATGAACATCATCGTCGA 57.267 42.857 0.00 0.00 34.28 4.20
2195 2243 2.809446 TCCATGAACATCATCGTCGAC 58.191 47.619 5.18 5.18 34.28 4.20
2196 2244 2.165437 TCCATGAACATCATCGTCGACA 59.835 45.455 17.16 3.13 34.28 4.35
2197 2245 2.929398 CCATGAACATCATCGTCGACAA 59.071 45.455 17.16 0.00 34.28 3.18
2198 2246 3.000623 CCATGAACATCATCGTCGACAAG 59.999 47.826 17.16 4.42 34.28 3.16
2199 2247 3.569250 TGAACATCATCGTCGACAAGA 57.431 42.857 17.16 10.08 0.00 3.02
2200 2248 3.908213 TGAACATCATCGTCGACAAGAA 58.092 40.909 17.16 0.00 0.00 2.52
2201 2249 3.673338 TGAACATCATCGTCGACAAGAAC 59.327 43.478 17.16 4.65 0.00 3.01
2202 2250 3.297830 ACATCATCGTCGACAAGAACA 57.702 42.857 17.16 0.00 0.00 3.18
2203 2251 3.649073 ACATCATCGTCGACAAGAACAA 58.351 40.909 17.16 0.00 0.00 2.83
2204 2252 3.675225 ACATCATCGTCGACAAGAACAAG 59.325 43.478 17.16 0.55 0.00 3.16
2205 2253 2.672714 TCATCGTCGACAAGAACAAGG 58.327 47.619 17.16 0.00 0.00 3.61
2206 2254 2.035449 TCATCGTCGACAAGAACAAGGT 59.965 45.455 17.16 0.00 0.00 3.50
2207 2255 2.129823 TCGTCGACAAGAACAAGGTC 57.870 50.000 17.16 0.00 0.00 3.85
2208 2256 1.137513 CGTCGACAAGAACAAGGTCC 58.862 55.000 17.16 0.00 0.00 4.46
2209 2257 1.269621 CGTCGACAAGAACAAGGTCCT 60.270 52.381 17.16 0.00 0.00 3.85
2210 2258 2.135933 GTCGACAAGAACAAGGTCCTG 58.864 52.381 11.55 0.00 0.00 3.86
2211 2259 0.868406 CGACAAGAACAAGGTCCTGC 59.132 55.000 0.00 0.00 0.00 4.85
2212 2260 1.541233 CGACAAGAACAAGGTCCTGCT 60.541 52.381 0.00 0.00 0.00 4.24
2213 2261 2.288825 CGACAAGAACAAGGTCCTGCTA 60.289 50.000 0.00 0.00 0.00 3.49
2214 2262 3.330267 GACAAGAACAAGGTCCTGCTAG 58.670 50.000 0.00 0.00 0.00 3.42
2215 2263 2.039084 ACAAGAACAAGGTCCTGCTAGG 59.961 50.000 0.00 0.00 36.46 3.02
2216 2264 0.615850 AGAACAAGGTCCTGCTAGGC 59.384 55.000 0.00 0.00 34.61 3.93
2217 2265 0.615850 GAACAAGGTCCTGCTAGGCT 59.384 55.000 0.00 0.00 34.61 4.58
2218 2266 1.003696 GAACAAGGTCCTGCTAGGCTT 59.996 52.381 0.00 0.00 34.61 4.35
2219 2267 1.068121 ACAAGGTCCTGCTAGGCTTT 58.932 50.000 0.00 0.00 34.61 3.51
2220 2268 1.425448 ACAAGGTCCTGCTAGGCTTTT 59.575 47.619 0.00 0.00 34.61 2.27
2221 2269 2.642807 ACAAGGTCCTGCTAGGCTTTTA 59.357 45.455 0.00 0.00 34.61 1.52
2222 2270 3.010420 CAAGGTCCTGCTAGGCTTTTAC 58.990 50.000 0.00 0.00 34.61 2.01
2223 2271 1.560146 AGGTCCTGCTAGGCTTTTACC 59.440 52.381 0.00 0.00 34.61 2.85
2224 2272 1.653151 GTCCTGCTAGGCTTTTACCG 58.347 55.000 0.00 0.00 34.61 4.02
2225 2273 1.206371 GTCCTGCTAGGCTTTTACCGA 59.794 52.381 0.00 0.00 34.61 4.69
2226 2274 2.116238 TCCTGCTAGGCTTTTACCGAT 58.884 47.619 0.00 0.00 34.61 4.18
2227 2275 2.158957 TCCTGCTAGGCTTTTACCGATG 60.159 50.000 0.00 0.00 34.61 3.84
2228 2276 1.599542 CTGCTAGGCTTTTACCGATGC 59.400 52.381 0.00 0.00 33.69 3.91
2229 2277 0.945099 GCTAGGCTTTTACCGATGCC 59.055 55.000 0.00 0.00 45.21 4.40
2230 2278 1.594331 CTAGGCTTTTACCGATGCCC 58.406 55.000 0.00 0.00 45.94 5.36
2231 2279 0.181824 TAGGCTTTTACCGATGCCCC 59.818 55.000 0.00 0.00 45.94 5.80
2232 2280 1.379309 GGCTTTTACCGATGCCCCA 60.379 57.895 0.00 0.00 39.49 4.96
2233 2281 0.968393 GGCTTTTACCGATGCCCCAA 60.968 55.000 0.00 0.00 39.49 4.12
2234 2282 1.111277 GCTTTTACCGATGCCCCAAT 58.889 50.000 0.00 0.00 0.00 3.16
2235 2283 1.202405 GCTTTTACCGATGCCCCAATG 60.202 52.381 0.00 0.00 0.00 2.82
2236 2284 2.099405 CTTTTACCGATGCCCCAATGT 58.901 47.619 0.00 0.00 0.00 2.71
2237 2285 3.283751 CTTTTACCGATGCCCCAATGTA 58.716 45.455 0.00 0.00 0.00 2.29
2238 2286 2.631160 TTACCGATGCCCCAATGTAG 57.369 50.000 0.00 0.00 0.00 2.74
2239 2287 0.762418 TACCGATGCCCCAATGTAGG 59.238 55.000 0.00 0.00 0.00 3.18
2240 2288 0.986019 ACCGATGCCCCAATGTAGGA 60.986 55.000 0.00 0.00 0.00 2.94
2241 2289 0.401738 CCGATGCCCCAATGTAGGAT 59.598 55.000 0.00 0.00 0.00 3.24
2242 2290 1.611673 CCGATGCCCCAATGTAGGATC 60.612 57.143 0.00 0.00 0.00 3.36
2243 2291 1.813513 GATGCCCCAATGTAGGATCG 58.186 55.000 0.00 0.00 0.00 3.69
2244 2292 1.347707 GATGCCCCAATGTAGGATCGA 59.652 52.381 0.00 0.00 0.00 3.59
2245 2293 1.208706 TGCCCCAATGTAGGATCGAA 58.791 50.000 0.00 0.00 0.00 3.71
2246 2294 1.562008 TGCCCCAATGTAGGATCGAAA 59.438 47.619 0.00 0.00 0.00 3.46
2247 2295 2.222027 GCCCCAATGTAGGATCGAAAG 58.778 52.381 0.00 0.00 0.00 2.62
2248 2296 2.421529 GCCCCAATGTAGGATCGAAAGT 60.422 50.000 0.00 0.00 0.00 2.66
2249 2297 3.181458 GCCCCAATGTAGGATCGAAAGTA 60.181 47.826 0.00 0.00 0.00 2.24
2250 2298 4.505039 GCCCCAATGTAGGATCGAAAGTAT 60.505 45.833 0.00 0.00 0.00 2.12
2251 2299 4.997395 CCCCAATGTAGGATCGAAAGTATG 59.003 45.833 0.00 0.00 0.00 2.39
2252 2300 5.454755 CCCCAATGTAGGATCGAAAGTATGT 60.455 44.000 0.00 0.00 0.00 2.29
2253 2301 5.696724 CCCAATGTAGGATCGAAAGTATGTC 59.303 44.000 0.00 0.00 0.00 3.06
2254 2302 6.463049 CCCAATGTAGGATCGAAAGTATGTCT 60.463 42.308 0.00 0.00 0.00 3.41
2255 2303 7.255836 CCCAATGTAGGATCGAAAGTATGTCTA 60.256 40.741 0.00 0.00 0.00 2.59
2256 2304 7.810282 CCAATGTAGGATCGAAAGTATGTCTAG 59.190 40.741 0.00 0.00 0.00 2.43
2257 2305 8.568794 CAATGTAGGATCGAAAGTATGTCTAGA 58.431 37.037 0.00 0.00 0.00 2.43
2258 2306 7.731882 TGTAGGATCGAAAGTATGTCTAGAG 57.268 40.000 0.00 0.00 0.00 2.43
2259 2307 6.711194 TGTAGGATCGAAAGTATGTCTAGAGG 59.289 42.308 0.00 0.00 0.00 3.69
2260 2308 5.074115 AGGATCGAAAGTATGTCTAGAGGG 58.926 45.833 0.00 0.00 0.00 4.30
2261 2309 4.218852 GGATCGAAAGTATGTCTAGAGGGG 59.781 50.000 0.00 0.00 0.00 4.79
2262 2310 4.515028 TCGAAAGTATGTCTAGAGGGGA 57.485 45.455 0.00 0.00 0.00 4.81
2263 2311 4.863548 TCGAAAGTATGTCTAGAGGGGAA 58.136 43.478 0.00 0.00 0.00 3.97
2264 2312 5.455872 TCGAAAGTATGTCTAGAGGGGAAT 58.544 41.667 0.00 0.00 0.00 3.01
2265 2313 5.302059 TCGAAAGTATGTCTAGAGGGGAATG 59.698 44.000 0.00 0.00 0.00 2.67
2266 2314 5.302059 CGAAAGTATGTCTAGAGGGGAATGA 59.698 44.000 0.00 0.00 0.00 2.57
2267 2315 6.015010 CGAAAGTATGTCTAGAGGGGAATGAT 60.015 42.308 0.00 0.00 0.00 2.45
2268 2316 7.472100 CGAAAGTATGTCTAGAGGGGAATGATT 60.472 40.741 0.00 0.00 0.00 2.57
2269 2317 8.798975 AAAGTATGTCTAGAGGGGAATGATTA 57.201 34.615 0.00 0.00 0.00 1.75
2270 2318 8.429237 AAGTATGTCTAGAGGGGAATGATTAG 57.571 38.462 0.00 0.00 0.00 1.73
2271 2319 7.770662 AGTATGTCTAGAGGGGAATGATTAGA 58.229 38.462 0.00 0.00 0.00 2.10
2272 2320 6.926630 ATGTCTAGAGGGGAATGATTAGAC 57.073 41.667 0.00 3.24 38.18 2.59
2273 2321 6.031964 TGTCTAGAGGGGAATGATTAGACT 57.968 41.667 0.00 0.00 38.39 3.24
2274 2322 7.162973 TGTCTAGAGGGGAATGATTAGACTA 57.837 40.000 0.00 0.00 38.39 2.59
2275 2323 7.005296 TGTCTAGAGGGGAATGATTAGACTAC 58.995 42.308 0.00 0.00 38.39 2.73
2276 2324 7.147105 TGTCTAGAGGGGAATGATTAGACTACT 60.147 40.741 0.00 0.00 38.39 2.57
2277 2325 7.726738 GTCTAGAGGGGAATGATTAGACTACTT 59.273 40.741 0.00 0.00 36.01 2.24
2278 2326 6.739331 AGAGGGGAATGATTAGACTACTTG 57.261 41.667 0.00 0.00 0.00 3.16
2279 2327 6.444704 AGAGGGGAATGATTAGACTACTTGA 58.555 40.000 0.00 0.00 0.00 3.02
2280 2328 6.325286 AGAGGGGAATGATTAGACTACTTGAC 59.675 42.308 0.00 0.00 0.00 3.18
2281 2329 5.367060 AGGGGAATGATTAGACTACTTGACC 59.633 44.000 0.00 0.00 0.00 4.02
2282 2330 5.130477 GGGGAATGATTAGACTACTTGACCA 59.870 44.000 0.00 0.00 0.00 4.02
2283 2331 6.352737 GGGGAATGATTAGACTACTTGACCAA 60.353 42.308 0.00 0.00 0.00 3.67
2284 2332 7.110155 GGGAATGATTAGACTACTTGACCAAA 58.890 38.462 0.00 0.00 0.00 3.28
2285 2333 7.775561 GGGAATGATTAGACTACTTGACCAAAT 59.224 37.037 0.00 0.00 0.00 2.32
2286 2334 9.832445 GGAATGATTAGACTACTTGACCAAATA 57.168 33.333 0.00 0.00 0.00 1.40
2296 2344 9.989869 GACTACTTGACCAAATAAAAATCTAGC 57.010 33.333 0.00 0.00 0.00 3.42
2297 2345 8.957466 ACTACTTGACCAAATAAAAATCTAGCC 58.043 33.333 0.00 0.00 0.00 3.93
2298 2346 9.178758 CTACTTGACCAAATAAAAATCTAGCCT 57.821 33.333 0.00 0.00 0.00 4.58
2299 2347 8.422577 ACTTGACCAAATAAAAATCTAGCCTT 57.577 30.769 0.00 0.00 0.00 4.35
2300 2348 8.870116 ACTTGACCAAATAAAAATCTAGCCTTT 58.130 29.630 0.00 0.00 0.00 3.11
2301 2349 9.710900 CTTGACCAAATAAAAATCTAGCCTTTT 57.289 29.630 6.78 6.78 0.00 2.27
2302 2350 9.705290 TTGACCAAATAAAAATCTAGCCTTTTC 57.295 29.630 5.25 0.00 0.00 2.29
2303 2351 8.311109 TGACCAAATAAAAATCTAGCCTTTTCC 58.689 33.333 5.25 0.00 0.00 3.13
2304 2352 7.620880 ACCAAATAAAAATCTAGCCTTTTCCC 58.379 34.615 5.25 0.00 0.00 3.97
2305 2353 7.236640 ACCAAATAAAAATCTAGCCTTTTCCCA 59.763 33.333 5.25 0.00 0.00 4.37
2306 2354 8.100164 CCAAATAAAAATCTAGCCTTTTCCCAA 58.900 33.333 5.25 0.00 0.00 4.12
2307 2355 9.671279 CAAATAAAAATCTAGCCTTTTCCCAAT 57.329 29.630 5.25 0.00 0.00 3.16
2312 2360 9.725019 AAAAATCTAGCCTTTTCCCAATTTTAG 57.275 29.630 4.09 0.00 0.00 1.85
2313 2361 8.435931 AAATCTAGCCTTTTCCCAATTTTAGT 57.564 30.769 0.00 0.00 0.00 2.24
2314 2362 8.435931 AATCTAGCCTTTTCCCAATTTTAGTT 57.564 30.769 0.00 0.00 0.00 2.24
2315 2363 7.462571 TCTAGCCTTTTCCCAATTTTAGTTC 57.537 36.000 0.00 0.00 0.00 3.01
2316 2364 7.238710 TCTAGCCTTTTCCCAATTTTAGTTCT 58.761 34.615 0.00 0.00 0.00 3.01
2317 2365 6.747414 AGCCTTTTCCCAATTTTAGTTCTT 57.253 33.333 0.00 0.00 0.00 2.52
2318 2366 6.524734 AGCCTTTTCCCAATTTTAGTTCTTG 58.475 36.000 0.00 0.00 0.00 3.02
2319 2367 5.700832 GCCTTTTCCCAATTTTAGTTCTTGG 59.299 40.000 0.00 0.00 39.31 3.61
2320 2368 5.700832 CCTTTTCCCAATTTTAGTTCTTGGC 59.299 40.000 0.00 0.00 38.47 4.52
2321 2369 5.878406 TTTCCCAATTTTAGTTCTTGGCA 57.122 34.783 0.00 0.00 38.47 4.92
2322 2370 5.467035 TTCCCAATTTTAGTTCTTGGCAG 57.533 39.130 0.00 0.00 38.47 4.85
2323 2371 4.735369 TCCCAATTTTAGTTCTTGGCAGA 58.265 39.130 0.00 0.00 38.47 4.26
2324 2372 5.332743 TCCCAATTTTAGTTCTTGGCAGAT 58.667 37.500 0.00 0.00 38.47 2.90
2325 2373 5.779771 TCCCAATTTTAGTTCTTGGCAGATT 59.220 36.000 0.00 0.00 38.47 2.40
2326 2374 6.269769 TCCCAATTTTAGTTCTTGGCAGATTT 59.730 34.615 0.00 0.00 38.47 2.17
2327 2375 6.936335 CCCAATTTTAGTTCTTGGCAGATTTT 59.064 34.615 0.00 0.00 38.47 1.82
2328 2376 8.093927 CCCAATTTTAGTTCTTGGCAGATTTTA 58.906 33.333 0.00 0.00 38.47 1.52
2329 2377 9.143631 CCAATTTTAGTTCTTGGCAGATTTTAG 57.856 33.333 0.00 0.00 33.59 1.85
2330 2378 8.650714 CAATTTTAGTTCTTGGCAGATTTTAGC 58.349 33.333 0.00 0.00 0.00 3.09
2331 2379 7.524717 TTTTAGTTCTTGGCAGATTTTAGCT 57.475 32.000 0.00 0.00 0.00 3.32
2332 2380 8.630054 TTTTAGTTCTTGGCAGATTTTAGCTA 57.370 30.769 0.00 0.00 0.00 3.32
2333 2381 8.807948 TTTAGTTCTTGGCAGATTTTAGCTAT 57.192 30.769 0.00 0.00 0.00 2.97
2334 2382 6.934048 AGTTCTTGGCAGATTTTAGCTATC 57.066 37.500 0.00 0.00 0.00 2.08
2335 2383 6.657875 AGTTCTTGGCAGATTTTAGCTATCT 58.342 36.000 0.00 0.00 32.66 1.98
2336 2384 7.115414 AGTTCTTGGCAGATTTTAGCTATCTT 58.885 34.615 0.00 0.00 30.05 2.40
2337 2385 8.267894 AGTTCTTGGCAGATTTTAGCTATCTTA 58.732 33.333 0.00 0.00 30.05 2.10
2338 2386 8.555361 GTTCTTGGCAGATTTTAGCTATCTTAG 58.445 37.037 0.00 0.00 30.05 2.18
2353 2401 6.674694 CTATCTTAGCACAAGTCAAGCAAT 57.325 37.500 0.00 0.00 0.00 3.56
2354 2402 5.557891 ATCTTAGCACAAGTCAAGCAATC 57.442 39.130 0.00 0.00 0.00 2.67
2355 2403 4.645535 TCTTAGCACAAGTCAAGCAATCT 58.354 39.130 0.00 0.00 0.00 2.40
2356 2404 4.692625 TCTTAGCACAAGTCAAGCAATCTC 59.307 41.667 0.00 0.00 0.00 2.75
2357 2405 2.157738 AGCACAAGTCAAGCAATCTCC 58.842 47.619 0.00 0.00 0.00 3.71
2358 2406 1.881973 GCACAAGTCAAGCAATCTCCA 59.118 47.619 0.00 0.00 0.00 3.86
2359 2407 2.351157 GCACAAGTCAAGCAATCTCCAC 60.351 50.000 0.00 0.00 0.00 4.02
2360 2408 2.880268 CACAAGTCAAGCAATCTCCACA 59.120 45.455 0.00 0.00 0.00 4.17
2361 2409 2.880890 ACAAGTCAAGCAATCTCCACAC 59.119 45.455 0.00 0.00 0.00 3.82
2362 2410 2.880268 CAAGTCAAGCAATCTCCACACA 59.120 45.455 0.00 0.00 0.00 3.72
2363 2411 2.775890 AGTCAAGCAATCTCCACACAG 58.224 47.619 0.00 0.00 0.00 3.66
2364 2412 2.105477 AGTCAAGCAATCTCCACACAGT 59.895 45.455 0.00 0.00 0.00 3.55
2365 2413 2.880890 GTCAAGCAATCTCCACACAGTT 59.119 45.455 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
357 361 0.833287 AGCGACAACCATATGGCTCT 59.167 50.000 22.18 3.63 39.32 4.09
746 753 3.676172 CCGTTGTATTTGAACGTAGAGCA 59.324 43.478 0.00 0.00 43.70 4.26
774 781 8.970691 AATCCTTTTGATAACAGAATTTGTCG 57.029 30.769 0.00 0.00 33.34 4.35
841 848 0.599558 TTCGTTGGAGTCCCACGTAG 59.400 55.000 28.95 7.84 43.41 3.51
846 853 0.181587 TTGCTTTCGTTGGAGTCCCA 59.818 50.000 6.74 0.00 41.64 4.37
875 883 1.871039 TCTTTGCGTAGTTGTGCCTTC 59.129 47.619 0.00 0.00 0.00 3.46
879 887 4.263800 CGATAATCTTTGCGTAGTTGTGC 58.736 43.478 0.00 0.00 0.00 4.57
888 905 3.126831 AGGAAGAGCGATAATCTTTGCG 58.873 45.455 0.00 0.00 37.14 4.85
940 957 0.743097 GTTGGATCTTGGCTGGATGC 59.257 55.000 0.00 5.26 41.94 3.91
974 997 5.529791 TCAACTCTCGTCCTTTTCAAGTAG 58.470 41.667 0.00 0.00 0.00 2.57
975 998 5.301045 TCTCAACTCTCGTCCTTTTCAAGTA 59.699 40.000 0.00 0.00 0.00 2.24
976 999 4.099573 TCTCAACTCTCGTCCTTTTCAAGT 59.900 41.667 0.00 0.00 0.00 3.16
977 1000 4.621991 TCTCAACTCTCGTCCTTTTCAAG 58.378 43.478 0.00 0.00 0.00 3.02
989 1012 2.688507 TGAACGGCATTCTCAACTCTC 58.311 47.619 0.00 0.00 38.25 3.20
990 1013 2.839486 TGAACGGCATTCTCAACTCT 57.161 45.000 0.00 0.00 38.25 3.24
1021 1044 3.878519 GACGGCGGTCGAGAGGAG 61.879 72.222 9.82 0.00 42.43 3.69
1059 1082 3.710722 CTGAAGCTGGCCGACCCT 61.711 66.667 0.00 0.00 33.59 4.34
1061 1084 4.785453 CCCTGAAGCTGGCCGACC 62.785 72.222 0.00 0.00 0.00 4.79
1203 1226 3.316573 CTCCGGGACCTTGGACAGC 62.317 68.421 0.00 0.00 0.00 4.40
1257 1280 2.383855 CCCTCCTTAGTCACTCTCCTG 58.616 57.143 0.00 0.00 0.00 3.86
1258 1281 1.342574 GCCCTCCTTAGTCACTCTCCT 60.343 57.143 0.00 0.00 0.00 3.69
1278 1301 4.335647 AGGCTGCCCTTGACCACG 62.336 66.667 16.57 0.00 38.74 4.94
1284 1307 1.378250 CTGAAGGAGGCTGCCCTTG 60.378 63.158 16.57 0.00 43.59 3.61
1312 1335 1.808945 CCTCGTCAGCTTTTTGCATCT 59.191 47.619 0.00 0.00 45.94 2.90
1324 1347 0.526524 GCGATGAACTCCCTCGTCAG 60.527 60.000 0.00 0.00 34.96 3.51
1356 1379 0.673644 CCAAGTTGCACTACTCCCGG 60.674 60.000 0.00 0.00 0.00 5.73
1363 1386 1.000506 GACGGTCTCCAAGTTGCACTA 59.999 52.381 0.00 0.00 0.00 2.74
1380 1403 2.567564 AATGGTACCGCCCGAAGACG 62.568 60.000 7.57 0.00 36.04 4.18
1408 1431 2.767644 TCAGGTCCAGGATATTCGGA 57.232 50.000 0.00 0.00 0.00 4.55
1411 1434 3.456277 ACCACTTCAGGTCCAGGATATTC 59.544 47.826 0.00 0.00 37.28 1.75
1422 1449 2.037144 AGTTACACGACCACTTCAGGT 58.963 47.619 0.00 0.00 46.82 4.00
1423 1450 2.814280 AGTTACACGACCACTTCAGG 57.186 50.000 0.00 0.00 0.00 3.86
1424 1451 7.878477 TTATAAAGTTACACGACCACTTCAG 57.122 36.000 0.00 0.00 30.22 3.02
1425 1452 8.836268 ATTTATAAAGTTACACGACCACTTCA 57.164 30.769 3.94 0.00 30.22 3.02
1470 1501 1.293924 GTCCATGGATCGAGCAACAG 58.706 55.000 19.62 0.00 0.00 3.16
1483 1514 2.802247 ACACATATGCGATTCGTCCATG 59.198 45.455 8.03 10.29 0.00 3.66
1522 1553 5.876460 GGATGCTCTTTGTTGCCATATTTTT 59.124 36.000 0.00 0.00 0.00 1.94
1562 1593 4.204799 ACCTCCACACCTTAACAAAAGAC 58.795 43.478 0.00 0.00 0.00 3.01
1567 1598 6.691255 AGTATAACCTCCACACCTTAACAA 57.309 37.500 0.00 0.00 0.00 2.83
1575 1606 4.401519 TCTGCACTAGTATAACCTCCACAC 59.598 45.833 0.00 0.00 0.00 3.82
1580 1611 6.342111 AGCTTTTCTGCACTAGTATAACCTC 58.658 40.000 0.00 0.00 34.99 3.85
1581 1612 6.301169 AGCTTTTCTGCACTAGTATAACCT 57.699 37.500 0.00 0.00 34.99 3.50
1687 1726 2.350522 GTGCACAACATGGACTAGAGG 58.649 52.381 13.17 0.00 45.77 3.69
1723 1764 5.409520 TCTCTCATGTAACTTGTGACATTGC 59.590 40.000 1.17 0.00 34.01 3.56
1727 1768 6.405278 TCTTCTCTCATGTAACTTGTGACA 57.595 37.500 0.00 0.00 0.00 3.58
1733 1774 4.691216 GGCGTTTCTTCTCTCATGTAACTT 59.309 41.667 0.00 0.00 0.00 2.66
1754 1795 1.791103 TAACCAAACGCAGTGCTGGC 61.791 55.000 19.04 0.00 45.00 4.85
1756 1797 0.944386 AGTAACCAAACGCAGTGCTG 59.056 50.000 14.33 9.40 45.00 4.41
1762 1803 3.502920 CACAAACAAGTAACCAAACGCA 58.497 40.909 0.00 0.00 0.00 5.24
1774 1815 2.415090 GCATCTAGGCAGCACAAACAAG 60.415 50.000 0.00 0.00 0.00 3.16
1775 1816 1.541147 GCATCTAGGCAGCACAAACAA 59.459 47.619 0.00 0.00 0.00 2.83
1798 1839 6.603997 TGTACACATAAGGAAACAACCAAACT 59.396 34.615 0.00 0.00 0.00 2.66
1799 1840 6.693978 GTGTACACATAAGGAAACAACCAAAC 59.306 38.462 21.14 0.00 0.00 2.93
1811 1852 8.417106 AGAGTAATCATCAGTGTACACATAAGG 58.583 37.037 27.06 13.48 0.00 2.69
1812 1853 9.457110 GAGAGTAATCATCAGTGTACACATAAG 57.543 37.037 27.06 14.15 0.00 1.73
1846 1887 7.122501 TCAATAAGATAAGCTCACCATGCAAAA 59.877 33.333 0.00 0.00 0.00 2.44
1848 1889 6.121590 TCAATAAGATAAGCTCACCATGCAA 58.878 36.000 0.00 0.00 0.00 4.08
1849 1890 5.683681 TCAATAAGATAAGCTCACCATGCA 58.316 37.500 0.00 0.00 0.00 3.96
1850 1891 6.624352 TTCAATAAGATAAGCTCACCATGC 57.376 37.500 0.00 0.00 0.00 4.06
1851 1892 8.442632 TCTTTCAATAAGATAAGCTCACCATG 57.557 34.615 0.00 0.00 0.00 3.66
1855 1896 6.765512 AGCCTCTTTCAATAAGATAAGCTCAC 59.234 38.462 0.00 0.00 0.00 3.51
1859 1900 7.128976 CGAAAGCCTCTTTCAATAAGATAAGC 58.871 38.462 16.54 0.00 0.00 3.09
1863 1904 5.586643 GGACGAAAGCCTCTTTCAATAAGAT 59.413 40.000 16.54 0.00 0.00 2.40
1865 1906 4.938226 AGGACGAAAGCCTCTTTCAATAAG 59.062 41.667 16.54 5.32 33.31 1.73
1869 1913 2.930826 AGGACGAAAGCCTCTTTCAA 57.069 45.000 16.54 0.00 33.31 2.69
1870 1914 2.897969 AGTAGGACGAAAGCCTCTTTCA 59.102 45.455 16.54 0.00 38.34 2.69
1875 1919 5.899299 TGTATAAAGTAGGACGAAAGCCTC 58.101 41.667 0.00 0.00 38.34 4.70
1878 1922 8.274248 GCTTTATGTATAAAGTAGGACGAAAGC 58.726 37.037 19.84 7.97 46.78 3.51
1879 1923 9.309516 TGCTTTATGTATAAAGTAGGACGAAAG 57.690 33.333 19.84 2.86 46.78 2.62
1885 1929 7.501225 GGGCTTTGCTTTATGTATAAAGTAGGA 59.499 37.037 19.84 10.85 46.78 2.94
1887 1931 7.225931 TCGGGCTTTGCTTTATGTATAAAGTAG 59.774 37.037 19.84 16.08 46.78 2.57
1888 1932 7.049133 TCGGGCTTTGCTTTATGTATAAAGTA 58.951 34.615 19.84 15.20 46.78 2.24
1889 1933 5.883673 TCGGGCTTTGCTTTATGTATAAAGT 59.116 36.000 19.84 0.00 46.78 2.66
1894 1942 4.013728 TGTTCGGGCTTTGCTTTATGTAT 58.986 39.130 0.00 0.00 0.00 2.29
1897 1945 2.986479 GTTGTTCGGGCTTTGCTTTATG 59.014 45.455 0.00 0.00 0.00 1.90
1907 1955 2.159382 CCTTTGTATGTTGTTCGGGCT 58.841 47.619 0.00 0.00 0.00 5.19
1909 1957 3.126343 GCTACCTTTGTATGTTGTTCGGG 59.874 47.826 0.00 0.00 0.00 5.14
1917 1965 3.585862 CGTGTGAGCTACCTTTGTATGT 58.414 45.455 0.00 0.00 0.00 2.29
1919 1967 2.028476 TGCGTGTGAGCTACCTTTGTAT 60.028 45.455 0.00 0.00 38.13 2.29
1927 1975 0.878523 TTGGTGTGCGTGTGAGCTAC 60.879 55.000 0.00 0.00 38.13 3.58
1988 2036 6.598064 TGTTTATAAGGTCTCTGGCTTTTAGC 59.402 38.462 0.00 0.00 41.46 3.09
1990 2038 7.913789 TCTGTTTATAAGGTCTCTGGCTTTTA 58.086 34.615 0.00 0.00 0.00 1.52
1991 2039 6.779860 TCTGTTTATAAGGTCTCTGGCTTTT 58.220 36.000 0.00 0.00 0.00 2.27
1992 2040 6.374417 TCTGTTTATAAGGTCTCTGGCTTT 57.626 37.500 0.00 0.00 0.00 3.51
1997 2045 7.361286 GCTTGGTTTCTGTTTATAAGGTCTCTG 60.361 40.741 0.00 0.00 0.00 3.35
1998 2046 6.655425 GCTTGGTTTCTGTTTATAAGGTCTCT 59.345 38.462 0.00 0.00 0.00 3.10
2001 2049 6.569179 TGCTTGGTTTCTGTTTATAAGGTC 57.431 37.500 0.00 0.00 0.00 3.85
2006 2054 6.293190 CGAGTGTTGCTTGGTTTCTGTTTATA 60.293 38.462 0.00 0.00 0.00 0.98
2007 2055 5.505654 CGAGTGTTGCTTGGTTTCTGTTTAT 60.506 40.000 0.00 0.00 0.00 1.40
2014 2062 0.663153 AGCGAGTGTTGCTTGGTTTC 59.337 50.000 0.00 0.00 40.48 2.78
2018 2066 1.873591 AGTTTAGCGAGTGTTGCTTGG 59.126 47.619 0.00 0.00 43.71 3.61
2026 2074 2.921754 CCCGTTCTTAGTTTAGCGAGTG 59.078 50.000 0.00 0.00 0.00 3.51
2027 2075 2.821969 TCCCGTTCTTAGTTTAGCGAGT 59.178 45.455 0.00 0.00 0.00 4.18
2028 2076 3.498927 TCCCGTTCTTAGTTTAGCGAG 57.501 47.619 0.00 0.00 0.00 5.03
2029 2077 3.005684 TGTTCCCGTTCTTAGTTTAGCGA 59.994 43.478 0.00 0.00 0.00 4.93
2030 2078 3.319755 TGTTCCCGTTCTTAGTTTAGCG 58.680 45.455 0.00 0.00 0.00 4.26
2031 2079 5.678132 TTTGTTCCCGTTCTTAGTTTAGC 57.322 39.130 0.00 0.00 0.00 3.09
2032 2080 6.484308 TCCTTTTGTTCCCGTTCTTAGTTTAG 59.516 38.462 0.00 0.00 0.00 1.85
2033 2081 6.355747 TCCTTTTGTTCCCGTTCTTAGTTTA 58.644 36.000 0.00 0.00 0.00 2.01
2034 2082 5.195185 TCCTTTTGTTCCCGTTCTTAGTTT 58.805 37.500 0.00 0.00 0.00 2.66
2035 2083 4.784177 TCCTTTTGTTCCCGTTCTTAGTT 58.216 39.130 0.00 0.00 0.00 2.24
2036 2084 4.102054 TCTCCTTTTGTTCCCGTTCTTAGT 59.898 41.667 0.00 0.00 0.00 2.24
2037 2085 4.638304 TCTCCTTTTGTTCCCGTTCTTAG 58.362 43.478 0.00 0.00 0.00 2.18
2038 2086 4.638304 CTCTCCTTTTGTTCCCGTTCTTA 58.362 43.478 0.00 0.00 0.00 2.10
2039 2087 3.477530 CTCTCCTTTTGTTCCCGTTCTT 58.522 45.455 0.00 0.00 0.00 2.52
2040 2088 2.810767 GCTCTCCTTTTGTTCCCGTTCT 60.811 50.000 0.00 0.00 0.00 3.01
2041 2089 1.535896 GCTCTCCTTTTGTTCCCGTTC 59.464 52.381 0.00 0.00 0.00 3.95
2042 2090 1.143073 AGCTCTCCTTTTGTTCCCGTT 59.857 47.619 0.00 0.00 0.00 4.44
2043 2091 0.765510 AGCTCTCCTTTTGTTCCCGT 59.234 50.000 0.00 0.00 0.00 5.28
2044 2092 1.443802 GAGCTCTCCTTTTGTTCCCG 58.556 55.000 6.43 0.00 0.00 5.14
2045 2093 1.443802 CGAGCTCTCCTTTTGTTCCC 58.556 55.000 12.85 0.00 0.00 3.97
2046 2094 1.443802 CCGAGCTCTCCTTTTGTTCC 58.556 55.000 12.85 0.00 0.00 3.62
2047 2095 1.443802 CCCGAGCTCTCCTTTTGTTC 58.556 55.000 12.85 0.00 0.00 3.18
2048 2096 0.036875 CCCCGAGCTCTCCTTTTGTT 59.963 55.000 12.85 0.00 0.00 2.83
2049 2097 1.679898 CCCCGAGCTCTCCTTTTGT 59.320 57.895 12.85 0.00 0.00 2.83
2050 2098 1.746991 GCCCCGAGCTCTCCTTTTG 60.747 63.158 12.85 0.00 38.99 2.44
2051 2099 2.224159 TGCCCCGAGCTCTCCTTTT 61.224 57.895 12.85 0.00 44.23 2.27
2052 2100 2.607750 TGCCCCGAGCTCTCCTTT 60.608 61.111 12.85 0.00 44.23 3.11
2053 2101 3.394836 GTGCCCCGAGCTCTCCTT 61.395 66.667 12.85 0.00 44.23 3.36
2064 2112 4.176752 CCTTAGGAGCGGTGCCCC 62.177 72.222 1.29 0.00 0.00 5.80
2065 2113 3.081409 TCCTTAGGAGCGGTGCCC 61.081 66.667 1.29 0.00 0.00 5.36
2066 2114 2.501610 CTCCTTAGGAGCGGTGCC 59.498 66.667 16.01 0.00 43.29 5.01
2074 2122 3.314635 GTCGCTTCGTATTCTCCTTAGGA 59.685 47.826 0.00 0.00 0.00 2.94
2075 2123 3.630101 GTCGCTTCGTATTCTCCTTAGG 58.370 50.000 0.00 0.00 0.00 2.69
2076 2124 3.002042 TCGTCGCTTCGTATTCTCCTTAG 59.998 47.826 0.00 0.00 0.00 2.18
2077 2125 2.938451 TCGTCGCTTCGTATTCTCCTTA 59.062 45.455 0.00 0.00 0.00 2.69
2078 2126 1.741706 TCGTCGCTTCGTATTCTCCTT 59.258 47.619 0.00 0.00 0.00 3.36
2079 2127 1.376543 TCGTCGCTTCGTATTCTCCT 58.623 50.000 0.00 0.00 0.00 3.69
2080 2128 2.308811 GATCGTCGCTTCGTATTCTCC 58.691 52.381 0.00 0.00 0.00 3.71
2081 2129 2.286831 TGGATCGTCGCTTCGTATTCTC 60.287 50.000 0.00 0.00 0.00 2.87
2082 2130 1.674441 TGGATCGTCGCTTCGTATTCT 59.326 47.619 0.00 0.00 0.00 2.40
2083 2131 2.044860 CTGGATCGTCGCTTCGTATTC 58.955 52.381 0.00 0.00 0.00 1.75
2084 2132 1.269102 CCTGGATCGTCGCTTCGTATT 60.269 52.381 0.00 0.00 0.00 1.89
2085 2133 0.311165 CCTGGATCGTCGCTTCGTAT 59.689 55.000 0.00 0.00 0.00 3.06
2086 2134 1.028330 ACCTGGATCGTCGCTTCGTA 61.028 55.000 0.00 0.00 0.00 3.43
2087 2135 1.874345 AACCTGGATCGTCGCTTCGT 61.874 55.000 0.00 0.00 0.00 3.85
2088 2136 1.153823 AACCTGGATCGTCGCTTCG 60.154 57.895 0.00 0.00 0.00 3.79
2089 2137 0.389948 ACAACCTGGATCGTCGCTTC 60.390 55.000 0.00 0.00 0.00 3.86
2090 2138 0.892755 TACAACCTGGATCGTCGCTT 59.107 50.000 0.00 0.00 0.00 4.68
2091 2139 0.172803 GTACAACCTGGATCGTCGCT 59.827 55.000 0.00 0.00 0.00 4.93
2092 2140 0.108992 TGTACAACCTGGATCGTCGC 60.109 55.000 0.00 0.00 0.00 5.19
2093 2141 2.259618 CTTGTACAACCTGGATCGTCG 58.740 52.381 3.59 0.00 0.00 5.12
2094 2142 2.232941 TCCTTGTACAACCTGGATCGTC 59.767 50.000 3.59 0.00 0.00 4.20
2095 2143 2.253610 TCCTTGTACAACCTGGATCGT 58.746 47.619 3.59 0.00 0.00 3.73
2096 2144 3.262420 CTTCCTTGTACAACCTGGATCG 58.738 50.000 14.02 6.78 0.00 3.69
2097 2145 4.003648 CACTTCCTTGTACAACCTGGATC 58.996 47.826 14.02 0.00 0.00 3.36
2098 2146 3.244911 CCACTTCCTTGTACAACCTGGAT 60.245 47.826 14.02 0.55 0.00 3.41
2099 2147 2.105821 CCACTTCCTTGTACAACCTGGA 59.894 50.000 3.59 7.59 0.00 3.86
2100 2148 2.158667 ACCACTTCCTTGTACAACCTGG 60.159 50.000 3.59 5.08 0.00 4.45
2101 2149 3.208747 ACCACTTCCTTGTACAACCTG 57.791 47.619 3.59 0.00 0.00 4.00
2102 2150 3.971971 ACTACCACTTCCTTGTACAACCT 59.028 43.478 3.59 0.00 0.00 3.50
2103 2151 4.347360 ACTACCACTTCCTTGTACAACC 57.653 45.455 3.59 0.00 0.00 3.77
2104 2152 5.818857 TCAAACTACCACTTCCTTGTACAAC 59.181 40.000 3.59 0.00 0.00 3.32
2105 2153 5.991861 TCAAACTACCACTTCCTTGTACAA 58.008 37.500 8.28 8.28 0.00 2.41
2106 2154 5.617528 TCAAACTACCACTTCCTTGTACA 57.382 39.130 0.00 0.00 0.00 2.90
2107 2155 5.469084 CCTTCAAACTACCACTTCCTTGTAC 59.531 44.000 0.00 0.00 0.00 2.90
2108 2156 5.367352 TCCTTCAAACTACCACTTCCTTGTA 59.633 40.000 0.00 0.00 0.00 2.41
2109 2157 4.165372 TCCTTCAAACTACCACTTCCTTGT 59.835 41.667 0.00 0.00 0.00 3.16
2110 2158 4.714632 TCCTTCAAACTACCACTTCCTTG 58.285 43.478 0.00 0.00 0.00 3.61
2111 2159 4.202472 CCTCCTTCAAACTACCACTTCCTT 60.202 45.833 0.00 0.00 0.00 3.36
2112 2160 3.328050 CCTCCTTCAAACTACCACTTCCT 59.672 47.826 0.00 0.00 0.00 3.36
2113 2161 3.326880 TCCTCCTTCAAACTACCACTTCC 59.673 47.826 0.00 0.00 0.00 3.46
2114 2162 4.283722 TCTCCTCCTTCAAACTACCACTTC 59.716 45.833 0.00 0.00 0.00 3.01
2115 2163 4.232091 TCTCCTCCTTCAAACTACCACTT 58.768 43.478 0.00 0.00 0.00 3.16
2116 2164 3.835395 CTCTCCTCCTTCAAACTACCACT 59.165 47.826 0.00 0.00 0.00 4.00
2117 2165 3.055747 CCTCTCCTCCTTCAAACTACCAC 60.056 52.174 0.00 0.00 0.00 4.16
2118 2166 3.173965 CCTCTCCTCCTTCAAACTACCA 58.826 50.000 0.00 0.00 0.00 3.25
2119 2167 2.093394 GCCTCTCCTCCTTCAAACTACC 60.093 54.545 0.00 0.00 0.00 3.18
2120 2168 2.567615 TGCCTCTCCTCCTTCAAACTAC 59.432 50.000 0.00 0.00 0.00 2.73
2121 2169 2.902608 TGCCTCTCCTCCTTCAAACTA 58.097 47.619 0.00 0.00 0.00 2.24
2122 2170 1.734655 TGCCTCTCCTCCTTCAAACT 58.265 50.000 0.00 0.00 0.00 2.66
2123 2171 2.568623 TTGCCTCTCCTCCTTCAAAC 57.431 50.000 0.00 0.00 0.00 2.93
2124 2172 3.814504 ATTTGCCTCTCCTCCTTCAAA 57.185 42.857 0.00 0.00 0.00 2.69
2125 2173 4.927267 TTATTTGCCTCTCCTCCTTCAA 57.073 40.909 0.00 0.00 0.00 2.69
2126 2174 4.927267 TTTATTTGCCTCTCCTCCTTCA 57.073 40.909 0.00 0.00 0.00 3.02
2127 2175 5.888161 TCATTTTATTTGCCTCTCCTCCTTC 59.112 40.000 0.00 0.00 0.00 3.46
2128 2176 5.654209 GTCATTTTATTTGCCTCTCCTCCTT 59.346 40.000 0.00 0.00 0.00 3.36
2129 2177 5.196695 GTCATTTTATTTGCCTCTCCTCCT 58.803 41.667 0.00 0.00 0.00 3.69
2130 2178 4.949856 TGTCATTTTATTTGCCTCTCCTCC 59.050 41.667 0.00 0.00 0.00 4.30
2131 2179 6.545298 AGATGTCATTTTATTTGCCTCTCCTC 59.455 38.462 0.00 0.00 0.00 3.71
2132 2180 6.430007 AGATGTCATTTTATTTGCCTCTCCT 58.570 36.000 0.00 0.00 0.00 3.69
2133 2181 6.238869 GGAGATGTCATTTTATTTGCCTCTCC 60.239 42.308 0.00 0.00 38.57 3.71
2134 2182 6.319658 TGGAGATGTCATTTTATTTGCCTCTC 59.680 38.462 0.00 0.00 0.00 3.20
2135 2183 6.189859 TGGAGATGTCATTTTATTTGCCTCT 58.810 36.000 0.00 0.00 0.00 3.69
2136 2184 6.455360 TGGAGATGTCATTTTATTTGCCTC 57.545 37.500 0.00 0.00 0.00 4.70
2137 2185 6.127253 CCTTGGAGATGTCATTTTATTTGCCT 60.127 38.462 0.00 0.00 0.00 4.75
2138 2186 6.044682 CCTTGGAGATGTCATTTTATTTGCC 58.955 40.000 0.00 0.00 0.00 4.52
2139 2187 6.866480 TCCTTGGAGATGTCATTTTATTTGC 58.134 36.000 0.00 0.00 0.00 3.68
2140 2188 8.284945 TCTCCTTGGAGATGTCATTTTATTTG 57.715 34.615 14.79 0.00 0.00 2.32
2141 2189 8.884124 TTCTCCTTGGAGATGTCATTTTATTT 57.116 30.769 18.81 0.00 0.00 1.40
2142 2190 8.331740 TCTTCTCCTTGGAGATGTCATTTTATT 58.668 33.333 23.26 0.00 0.00 1.40
2143 2191 7.865820 TCTTCTCCTTGGAGATGTCATTTTAT 58.134 34.615 23.26 0.00 0.00 1.40
2144 2192 7.257790 TCTTCTCCTTGGAGATGTCATTTTA 57.742 36.000 23.26 6.97 0.00 1.52
2145 2193 6.131972 TCTTCTCCTTGGAGATGTCATTTT 57.868 37.500 23.26 0.00 0.00 1.82
2146 2194 5.768980 TCTTCTCCTTGGAGATGTCATTT 57.231 39.130 23.26 0.00 0.00 2.32
2147 2195 5.495640 GTTCTTCTCCTTGGAGATGTCATT 58.504 41.667 23.26 0.00 0.00 2.57
2148 2196 4.382470 CGTTCTTCTCCTTGGAGATGTCAT 60.382 45.833 23.26 0.00 0.00 3.06
2149 2197 3.056536 CGTTCTTCTCCTTGGAGATGTCA 60.057 47.826 23.26 13.74 0.00 3.58
2150 2198 3.516615 CGTTCTTCTCCTTGGAGATGTC 58.483 50.000 23.26 18.07 0.00 3.06
2151 2199 2.234908 CCGTTCTTCTCCTTGGAGATGT 59.765 50.000 23.26 0.00 0.00 3.06
2152 2200 2.234908 ACCGTTCTTCTCCTTGGAGATG 59.765 50.000 18.81 19.60 0.00 2.90
2153 2201 2.541466 ACCGTTCTTCTCCTTGGAGAT 58.459 47.619 18.81 1.00 0.00 2.75
2154 2202 2.011122 ACCGTTCTTCTCCTTGGAGA 57.989 50.000 14.79 14.79 0.00 3.71
2155 2203 3.181474 GGATACCGTTCTTCTCCTTGGAG 60.181 52.174 10.28 10.28 0.00 3.86
2156 2204 2.764572 GGATACCGTTCTTCTCCTTGGA 59.235 50.000 0.00 0.00 0.00 3.53
2157 2205 2.500098 TGGATACCGTTCTTCTCCTTGG 59.500 50.000 0.00 0.00 0.00 3.61
2158 2206 3.887621 TGGATACCGTTCTTCTCCTTG 57.112 47.619 0.00 0.00 0.00 3.61
2159 2207 4.030913 TCATGGATACCGTTCTTCTCCTT 58.969 43.478 0.00 0.00 0.00 3.36
2160 2208 3.643237 TCATGGATACCGTTCTTCTCCT 58.357 45.455 0.00 0.00 0.00 3.69
2161 2209 4.120589 GTTCATGGATACCGTTCTTCTCC 58.879 47.826 0.00 0.00 0.00 3.71
2162 2210 4.755411 TGTTCATGGATACCGTTCTTCTC 58.245 43.478 0.00 0.00 0.00 2.87
2163 2211 4.819105 TGTTCATGGATACCGTTCTTCT 57.181 40.909 0.00 0.00 0.00 2.85
2164 2212 5.116180 TGATGTTCATGGATACCGTTCTTC 58.884 41.667 0.00 0.00 0.00 2.87
2165 2213 5.097742 TGATGTTCATGGATACCGTTCTT 57.902 39.130 0.00 0.00 0.00 2.52
2166 2214 4.753516 TGATGTTCATGGATACCGTTCT 57.246 40.909 0.00 0.00 0.00 3.01
2167 2215 4.150627 CGATGATGTTCATGGATACCGTTC 59.849 45.833 0.00 0.00 37.20 3.95
2168 2216 4.058124 CGATGATGTTCATGGATACCGTT 58.942 43.478 0.00 0.00 37.20 4.44
2169 2217 3.069586 ACGATGATGTTCATGGATACCGT 59.930 43.478 6.52 1.31 37.20 4.83
2170 2218 3.653344 ACGATGATGTTCATGGATACCG 58.347 45.455 6.52 0.77 37.20 4.02
2171 2219 3.675225 CGACGATGATGTTCATGGATACC 59.325 47.826 6.52 0.00 37.20 2.73
2172 2220 4.383052 GTCGACGATGATGTTCATGGATAC 59.617 45.833 0.00 0.00 37.20 2.24
2173 2221 4.037446 TGTCGACGATGATGTTCATGGATA 59.963 41.667 11.62 0.00 37.20 2.59
2174 2222 3.181476 TGTCGACGATGATGTTCATGGAT 60.181 43.478 11.62 0.00 37.20 3.41
2175 2223 2.165437 TGTCGACGATGATGTTCATGGA 59.835 45.455 11.62 0.00 37.20 3.41
2176 2224 2.539476 TGTCGACGATGATGTTCATGG 58.461 47.619 11.62 0.00 37.20 3.66
2177 2225 3.859386 TCTTGTCGACGATGATGTTCATG 59.141 43.478 11.62 0.00 37.20 3.07
2178 2226 4.110036 TCTTGTCGACGATGATGTTCAT 57.890 40.909 11.62 0.00 40.34 2.57
2179 2227 3.569250 TCTTGTCGACGATGATGTTCA 57.431 42.857 11.62 0.00 0.00 3.18
2180 2228 3.673338 TGTTCTTGTCGACGATGATGTTC 59.327 43.478 11.62 0.00 0.00 3.18
2181 2229 3.649073 TGTTCTTGTCGACGATGATGTT 58.351 40.909 11.62 0.00 0.00 2.71
2182 2230 3.297830 TGTTCTTGTCGACGATGATGT 57.702 42.857 11.62 0.00 0.00 3.06
2183 2231 3.061295 CCTTGTTCTTGTCGACGATGATG 59.939 47.826 11.62 0.00 0.00 3.07
2184 2232 3.254060 CCTTGTTCTTGTCGACGATGAT 58.746 45.455 11.62 0.00 0.00 2.45
2185 2233 2.035449 ACCTTGTTCTTGTCGACGATGA 59.965 45.455 11.62 5.98 0.00 2.92
2186 2234 2.404215 ACCTTGTTCTTGTCGACGATG 58.596 47.619 11.62 3.51 0.00 3.84
2187 2235 2.609737 GGACCTTGTTCTTGTCGACGAT 60.610 50.000 11.62 0.00 0.00 3.73
2188 2236 1.269413 GGACCTTGTTCTTGTCGACGA 60.269 52.381 11.62 8.40 0.00 4.20
2189 2237 1.137513 GGACCTTGTTCTTGTCGACG 58.862 55.000 11.62 0.00 0.00 5.12
2190 2238 2.135933 CAGGACCTTGTTCTTGTCGAC 58.864 52.381 9.11 9.11 0.00 4.20
2191 2239 1.540363 GCAGGACCTTGTTCTTGTCGA 60.540 52.381 0.00 0.00 0.00 4.20
2192 2240 0.868406 GCAGGACCTTGTTCTTGTCG 59.132 55.000 0.00 0.00 0.00 4.35
2193 2241 2.262423 AGCAGGACCTTGTTCTTGTC 57.738 50.000 0.00 0.00 0.00 3.18
2194 2242 2.039084 CCTAGCAGGACCTTGTTCTTGT 59.961 50.000 0.00 0.00 37.67 3.16
2195 2243 2.704572 CCTAGCAGGACCTTGTTCTTG 58.295 52.381 0.00 0.00 37.67 3.02
2196 2244 1.003696 GCCTAGCAGGACCTTGTTCTT 59.996 52.381 6.40 0.00 37.67 2.52
2197 2245 0.615850 GCCTAGCAGGACCTTGTTCT 59.384 55.000 6.40 0.00 37.67 3.01
2198 2246 0.615850 AGCCTAGCAGGACCTTGTTC 59.384 55.000 6.40 0.00 37.67 3.18
2199 2247 1.068121 AAGCCTAGCAGGACCTTGTT 58.932 50.000 6.40 0.00 37.67 2.83
2200 2248 1.068121 AAAGCCTAGCAGGACCTTGT 58.932 50.000 6.40 0.00 37.67 3.16
2201 2249 2.206576 AAAAGCCTAGCAGGACCTTG 57.793 50.000 6.40 0.00 37.67 3.61
2202 2250 2.026169 GGTAAAAGCCTAGCAGGACCTT 60.026 50.000 6.40 0.00 37.67 3.50
2203 2251 1.560146 GGTAAAAGCCTAGCAGGACCT 59.440 52.381 6.40 0.00 37.67 3.85
2204 2252 1.742750 CGGTAAAAGCCTAGCAGGACC 60.743 57.143 6.40 3.91 37.67 4.46
2205 2253 1.206371 TCGGTAAAAGCCTAGCAGGAC 59.794 52.381 6.40 0.00 37.67 3.85
2206 2254 1.563924 TCGGTAAAAGCCTAGCAGGA 58.436 50.000 6.40 0.00 37.67 3.86
2207 2255 2.213499 CATCGGTAAAAGCCTAGCAGG 58.787 52.381 0.00 0.00 38.80 4.85
2208 2256 1.599542 GCATCGGTAAAAGCCTAGCAG 59.400 52.381 0.00 0.00 0.00 4.24
2209 2257 1.663695 GCATCGGTAAAAGCCTAGCA 58.336 50.000 0.00 0.00 0.00 3.49
2210 2258 0.945099 GGCATCGGTAAAAGCCTAGC 59.055 55.000 0.00 0.00 43.70 3.42
2211 2259 1.594331 GGGCATCGGTAAAAGCCTAG 58.406 55.000 0.00 0.00 46.23 3.02
2212 2260 0.181824 GGGGCATCGGTAAAAGCCTA 59.818 55.000 0.00 0.00 46.23 3.93
2213 2261 1.076995 GGGGCATCGGTAAAAGCCT 60.077 57.895 0.00 0.00 46.23 4.58
2214 2262 0.968393 TTGGGGCATCGGTAAAAGCC 60.968 55.000 0.00 0.00 46.28 4.35
2215 2263 1.111277 ATTGGGGCATCGGTAAAAGC 58.889 50.000 0.00 0.00 0.00 3.51
2216 2264 2.099405 ACATTGGGGCATCGGTAAAAG 58.901 47.619 0.00 0.00 0.00 2.27
2217 2265 2.223803 ACATTGGGGCATCGGTAAAA 57.776 45.000 0.00 0.00 0.00 1.52
2218 2266 2.422235 CCTACATTGGGGCATCGGTAAA 60.422 50.000 0.00 0.00 0.00 2.01
2219 2267 1.142060 CCTACATTGGGGCATCGGTAA 59.858 52.381 0.00 0.00 0.00 2.85
2220 2268 0.762418 CCTACATTGGGGCATCGGTA 59.238 55.000 0.00 0.00 0.00 4.02
2221 2269 0.986019 TCCTACATTGGGGCATCGGT 60.986 55.000 0.00 0.00 0.00 4.69
2222 2270 0.401738 ATCCTACATTGGGGCATCGG 59.598 55.000 0.00 0.00 0.00 4.18
2223 2271 1.813513 GATCCTACATTGGGGCATCG 58.186 55.000 0.00 0.00 0.00 3.84
2224 2272 1.347707 TCGATCCTACATTGGGGCATC 59.652 52.381 0.00 0.00 0.00 3.91
2225 2273 1.434188 TCGATCCTACATTGGGGCAT 58.566 50.000 0.00 0.00 0.00 4.40
2226 2274 1.208706 TTCGATCCTACATTGGGGCA 58.791 50.000 0.00 0.00 0.00 5.36
2227 2275 2.222027 CTTTCGATCCTACATTGGGGC 58.778 52.381 0.00 0.00 0.00 5.80
2228 2276 3.560636 ACTTTCGATCCTACATTGGGG 57.439 47.619 0.00 0.00 0.00 4.96
2229 2277 5.611374 ACATACTTTCGATCCTACATTGGG 58.389 41.667 0.00 0.00 0.00 4.12
2230 2278 6.516718 AGACATACTTTCGATCCTACATTGG 58.483 40.000 0.00 0.00 0.00 3.16
2231 2279 8.568794 TCTAGACATACTTTCGATCCTACATTG 58.431 37.037 0.00 0.00 0.00 2.82
2232 2280 8.693120 TCTAGACATACTTTCGATCCTACATT 57.307 34.615 0.00 0.00 0.00 2.71
2233 2281 7.392113 CCTCTAGACATACTTTCGATCCTACAT 59.608 40.741 0.00 0.00 0.00 2.29
2234 2282 6.711194 CCTCTAGACATACTTTCGATCCTACA 59.289 42.308 0.00 0.00 0.00 2.74
2235 2283 6.149807 CCCTCTAGACATACTTTCGATCCTAC 59.850 46.154 0.00 0.00 0.00 3.18
2236 2284 6.239396 CCCTCTAGACATACTTTCGATCCTA 58.761 44.000 0.00 0.00 0.00 2.94
2237 2285 5.074115 CCCTCTAGACATACTTTCGATCCT 58.926 45.833 0.00 0.00 0.00 3.24
2238 2286 4.218852 CCCCTCTAGACATACTTTCGATCC 59.781 50.000 0.00 0.00 0.00 3.36
2239 2287 5.071370 TCCCCTCTAGACATACTTTCGATC 58.929 45.833 0.00 0.00 0.00 3.69
2240 2288 5.063017 TCCCCTCTAGACATACTTTCGAT 57.937 43.478 0.00 0.00 0.00 3.59
2241 2289 4.515028 TCCCCTCTAGACATACTTTCGA 57.485 45.455 0.00 0.00 0.00 3.71
2242 2290 5.302059 TCATTCCCCTCTAGACATACTTTCG 59.698 44.000 0.00 0.00 0.00 3.46
2243 2291 6.732896 TCATTCCCCTCTAGACATACTTTC 57.267 41.667 0.00 0.00 0.00 2.62
2244 2292 7.698163 AATCATTCCCCTCTAGACATACTTT 57.302 36.000 0.00 0.00 0.00 2.66
2245 2293 8.235230 TCTAATCATTCCCCTCTAGACATACTT 58.765 37.037 0.00 0.00 0.00 2.24
2246 2294 7.672239 GTCTAATCATTCCCCTCTAGACATACT 59.328 40.741 0.00 0.00 36.72 2.12
2247 2295 7.672239 AGTCTAATCATTCCCCTCTAGACATAC 59.328 40.741 9.11 0.00 38.36 2.39
2248 2296 7.770662 AGTCTAATCATTCCCCTCTAGACATA 58.229 38.462 9.11 0.00 38.36 2.29
2249 2297 6.629156 AGTCTAATCATTCCCCTCTAGACAT 58.371 40.000 9.11 0.00 38.36 3.06
2250 2298 6.031964 AGTCTAATCATTCCCCTCTAGACA 57.968 41.667 9.11 0.00 38.36 3.41
2251 2299 7.235804 AGTAGTCTAATCATTCCCCTCTAGAC 58.764 42.308 0.00 0.00 36.89 2.59
2252 2300 7.409408 AGTAGTCTAATCATTCCCCTCTAGA 57.591 40.000 0.00 0.00 0.00 2.43
2253 2301 7.726291 TCAAGTAGTCTAATCATTCCCCTCTAG 59.274 40.741 0.00 0.00 0.00 2.43
2254 2302 7.506261 GTCAAGTAGTCTAATCATTCCCCTCTA 59.494 40.741 0.00 0.00 0.00 2.43
2255 2303 6.325286 GTCAAGTAGTCTAATCATTCCCCTCT 59.675 42.308 0.00 0.00 0.00 3.69
2256 2304 6.463190 GGTCAAGTAGTCTAATCATTCCCCTC 60.463 46.154 0.00 0.00 0.00 4.30
2257 2305 5.367060 GGTCAAGTAGTCTAATCATTCCCCT 59.633 44.000 0.00 0.00 0.00 4.79
2258 2306 5.130477 TGGTCAAGTAGTCTAATCATTCCCC 59.870 44.000 0.00 0.00 0.00 4.81
2259 2307 6.235231 TGGTCAAGTAGTCTAATCATTCCC 57.765 41.667 0.00 0.00 0.00 3.97
2260 2308 8.738645 ATTTGGTCAAGTAGTCTAATCATTCC 57.261 34.615 0.00 0.00 0.00 3.01
2270 2318 9.989869 GCTAGATTTTTATTTGGTCAAGTAGTC 57.010 33.333 0.00 0.00 0.00 2.59
2271 2319 8.957466 GGCTAGATTTTTATTTGGTCAAGTAGT 58.043 33.333 0.00 0.00 0.00 2.73
2272 2320 9.178758 AGGCTAGATTTTTATTTGGTCAAGTAG 57.821 33.333 0.00 0.00 0.00 2.57
2273 2321 9.528489 AAGGCTAGATTTTTATTTGGTCAAGTA 57.472 29.630 0.00 0.00 0.00 2.24
2274 2322 8.422577 AAGGCTAGATTTTTATTTGGTCAAGT 57.577 30.769 0.00 0.00 0.00 3.16
2275 2323 9.710900 AAAAGGCTAGATTTTTATTTGGTCAAG 57.289 29.630 0.00 0.00 0.00 3.02
2276 2324 9.705290 GAAAAGGCTAGATTTTTATTTGGTCAA 57.295 29.630 0.00 0.00 30.22 3.18
2277 2325 8.311109 GGAAAAGGCTAGATTTTTATTTGGTCA 58.689 33.333 0.00 0.00 30.22 4.02
2278 2326 7.764443 GGGAAAAGGCTAGATTTTTATTTGGTC 59.236 37.037 0.00 0.00 30.22 4.02
2279 2327 7.236640 TGGGAAAAGGCTAGATTTTTATTTGGT 59.763 33.333 0.00 0.00 30.22 3.67
2280 2328 7.619965 TGGGAAAAGGCTAGATTTTTATTTGG 58.380 34.615 0.00 0.00 30.22 3.28
2281 2329 9.671279 ATTGGGAAAAGGCTAGATTTTTATTTG 57.329 29.630 0.00 0.00 30.22 2.32
2286 2334 9.725019 CTAAAATTGGGAAAAGGCTAGATTTTT 57.275 29.630 0.00 0.00 30.22 1.94
2287 2335 8.880244 ACTAAAATTGGGAAAAGGCTAGATTTT 58.120 29.630 0.00 0.00 32.68 1.82
2288 2336 8.435931 ACTAAAATTGGGAAAAGGCTAGATTT 57.564 30.769 0.00 0.00 0.00 2.17
2289 2337 8.435931 AACTAAAATTGGGAAAAGGCTAGATT 57.564 30.769 0.00 0.00 0.00 2.40
2290 2338 7.895962 AGAACTAAAATTGGGAAAAGGCTAGAT 59.104 33.333 0.00 0.00 0.00 1.98
2291 2339 7.238710 AGAACTAAAATTGGGAAAAGGCTAGA 58.761 34.615 0.00 0.00 0.00 2.43
2292 2340 7.468141 AGAACTAAAATTGGGAAAAGGCTAG 57.532 36.000 0.00 0.00 0.00 3.42
2293 2341 7.256154 CCAAGAACTAAAATTGGGAAAAGGCTA 60.256 37.037 0.00 0.00 39.87 3.93
2294 2342 6.464322 CCAAGAACTAAAATTGGGAAAAGGCT 60.464 38.462 0.00 0.00 39.87 4.58
2295 2343 5.700832 CCAAGAACTAAAATTGGGAAAAGGC 59.299 40.000 0.00 0.00 39.87 4.35
2296 2344 5.700832 GCCAAGAACTAAAATTGGGAAAAGG 59.299 40.000 5.43 0.00 43.06 3.11
2297 2345 6.287525 TGCCAAGAACTAAAATTGGGAAAAG 58.712 36.000 5.43 0.00 40.87 2.27
2298 2346 6.098982 TCTGCCAAGAACTAAAATTGGGAAAA 59.901 34.615 5.43 0.00 42.82 2.29
2299 2347 5.600484 TCTGCCAAGAACTAAAATTGGGAAA 59.400 36.000 5.43 0.00 42.82 3.13
2300 2348 5.144100 TCTGCCAAGAACTAAAATTGGGAA 58.856 37.500 5.43 0.00 42.82 3.97
2301 2349 4.735369 TCTGCCAAGAACTAAAATTGGGA 58.265 39.130 5.43 1.58 43.06 4.37
2302 2350 5.665916 ATCTGCCAAGAACTAAAATTGGG 57.334 39.130 5.43 0.00 43.06 4.12
2303 2351 7.967890 AAAATCTGCCAAGAACTAAAATTGG 57.032 32.000 0.00 0.00 45.16 3.16
2304 2352 8.650714 GCTAAAATCTGCCAAGAACTAAAATTG 58.349 33.333 0.00 0.00 35.59 2.32
2305 2353 8.588472 AGCTAAAATCTGCCAAGAACTAAAATT 58.412 29.630 0.00 0.00 35.59 1.82
2306 2354 8.127150 AGCTAAAATCTGCCAAGAACTAAAAT 57.873 30.769 0.00 0.00 35.59 1.82
2307 2355 7.524717 AGCTAAAATCTGCCAAGAACTAAAA 57.475 32.000 0.00 0.00 35.59 1.52
2308 2356 8.807948 ATAGCTAAAATCTGCCAAGAACTAAA 57.192 30.769 0.00 0.00 35.59 1.85
2309 2357 8.267894 AGATAGCTAAAATCTGCCAAGAACTAA 58.732 33.333 0.00 0.00 35.59 2.24
2310 2358 7.796054 AGATAGCTAAAATCTGCCAAGAACTA 58.204 34.615 0.00 0.00 35.59 2.24
2311 2359 6.657875 AGATAGCTAAAATCTGCCAAGAACT 58.342 36.000 0.00 0.00 35.59 3.01
2312 2360 6.934048 AGATAGCTAAAATCTGCCAAGAAC 57.066 37.500 0.00 0.00 35.59 3.01
2313 2361 8.668510 CTAAGATAGCTAAAATCTGCCAAGAA 57.331 34.615 0.00 0.00 35.59 2.52
2330 2378 6.538021 AGATTGCTTGACTTGTGCTAAGATAG 59.462 38.462 8.05 4.08 0.00 2.08
2331 2379 6.409704 AGATTGCTTGACTTGTGCTAAGATA 58.590 36.000 8.05 0.00 0.00 1.98
2332 2380 5.251764 AGATTGCTTGACTTGTGCTAAGAT 58.748 37.500 8.05 0.00 0.00 2.40
2333 2381 4.645535 AGATTGCTTGACTTGTGCTAAGA 58.354 39.130 8.05 0.00 0.00 2.10
2334 2382 4.142730 GGAGATTGCTTGACTTGTGCTAAG 60.143 45.833 0.58 0.58 0.00 2.18
2335 2383 3.753272 GGAGATTGCTTGACTTGTGCTAA 59.247 43.478 0.00 0.00 0.00 3.09
2336 2384 3.244526 TGGAGATTGCTTGACTTGTGCTA 60.245 43.478 0.00 0.00 0.00 3.49
2337 2385 2.157738 GGAGATTGCTTGACTTGTGCT 58.842 47.619 0.00 0.00 0.00 4.40
2338 2386 1.881973 TGGAGATTGCTTGACTTGTGC 59.118 47.619 0.00 0.00 0.00 4.57
2339 2387 2.880268 TGTGGAGATTGCTTGACTTGTG 59.120 45.455 0.00 0.00 0.00 3.33
2340 2388 2.880890 GTGTGGAGATTGCTTGACTTGT 59.119 45.455 0.00 0.00 0.00 3.16
2341 2389 2.880268 TGTGTGGAGATTGCTTGACTTG 59.120 45.455 0.00 0.00 0.00 3.16
2342 2390 3.144506 CTGTGTGGAGATTGCTTGACTT 58.855 45.455 0.00 0.00 0.00 3.01
2343 2391 2.105477 ACTGTGTGGAGATTGCTTGACT 59.895 45.455 0.00 0.00 0.00 3.41
2344 2392 2.498167 ACTGTGTGGAGATTGCTTGAC 58.502 47.619 0.00 0.00 0.00 3.18
2345 2393 2.936919 ACTGTGTGGAGATTGCTTGA 57.063 45.000 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.