Multiple sequence alignment - TraesCS4A01G055100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G055100 chr4A 100.000 3443 0 0 1 3443 46146357 46149799 0.000000e+00 6359.0
1 TraesCS4A01G055100 chr4A 93.443 244 12 2 29 269 269995349 269995591 3.270000e-95 359.0
2 TraesCS4A01G055100 chr4A 87.814 279 26 1 265 535 270101158 270101436 1.540000e-83 320.0
3 TraesCS4A01G055100 chr4D 94.209 1934 77 6 658 2559 418773796 418775726 0.000000e+00 2918.0
4 TraesCS4A01G055100 chr4D 91.096 146 11 2 1299 1442 273914801 273914656 2.710000e-46 196.0
5 TraesCS4A01G055100 chr4D 97.059 34 1 0 3291 3324 6753742 6753775 1.330000e-04 58.4
6 TraesCS4A01G055100 chr4B 94.483 1867 66 9 727 2559 515071861 515069998 0.000000e+00 2843.0
7 TraesCS4A01G055100 chr4B 94.727 531 27 1 2663 3193 57252082 57252611 0.000000e+00 824.0
8 TraesCS4A01G055100 chr4B 100.000 102 0 0 3342 3443 305306978 305306877 4.540000e-44 189.0
9 TraesCS4A01G055100 chr4B 91.509 106 4 4 2565 2666 515069820 515069716 1.290000e-29 141.0
10 TraesCS4A01G055100 chr4B 94.286 35 2 0 3290 3324 539498003 539497969 2.000000e-03 54.7
11 TraesCS4A01G055100 chr2A 98.106 528 10 0 2666 3193 60769727 60770254 0.000000e+00 920.0
12 TraesCS4A01G055100 chr2A 88.288 111 13 0 425 535 735780982 735781092 2.160000e-27 134.0
13 TraesCS4A01G055100 chr2A 94.444 36 2 0 3290 3325 522077436 522077401 4.800000e-04 56.5
14 TraesCS4A01G055100 chr6A 96.610 531 18 0 2666 3196 346913802 346913272 0.000000e+00 881.0
15 TraesCS4A01G055100 chr6A 96.429 532 19 0 2662 3193 220259522 220260053 0.000000e+00 878.0
16 TraesCS4A01G055100 chr6A 94.162 531 31 0 2666 3196 396577353 396576823 0.000000e+00 809.0
17 TraesCS4A01G055100 chr5D 95.849 530 22 0 2666 3195 410509330 410509859 0.000000e+00 857.0
18 TraesCS4A01G055100 chr5D 93.705 413 25 1 1554 1966 486832524 486832113 4.880000e-173 617.0
19 TraesCS4A01G055100 chr5D 89.888 178 17 1 1299 1475 524589737 524589914 9.610000e-56 228.0
20 TraesCS4A01G055100 chr5D 87.500 96 10 2 425 519 368821486 368821392 3.630000e-20 110.0
21 TraesCS4A01G055100 chr5D 82.609 115 20 0 421 535 104027563 104027449 6.080000e-18 102.0
22 TraesCS4A01G055100 chr7A 95.076 528 26 0 2666 3193 617196212 617196739 0.000000e+00 832.0
23 TraesCS4A01G055100 chr3A 94.896 529 27 0 2666 3194 79312269 79312797 0.000000e+00 828.0
24 TraesCS4A01G055100 chr3A 87.255 102 11 2 1520 1621 142977324 142977423 7.810000e-22 115.0
25 TraesCS4A01G055100 chr3D 94.508 528 29 0 2666 3193 519117922 519118449 0.000000e+00 815.0
26 TraesCS4A01G055100 chr3D 93.820 178 10 1 1299 1475 47138308 47138485 2.040000e-67 267.0
27 TraesCS4A01G055100 chr3D 96.875 64 2 0 1549 1612 47138478 47138541 1.310000e-19 108.0
28 TraesCS4A01G055100 chr2B 91.068 459 36 5 1299 1755 672636163 672635708 1.760000e-172 616.0
29 TraesCS4A01G055100 chr2B 90.980 255 22 1 1299 1552 682131728 682131982 3.290000e-90 342.0
30 TraesCS4A01G055100 chr2B 94.444 36 2 0 3291 3326 585713599 585713564 4.800000e-04 56.5
31 TraesCS4A01G055100 chr7D 88.753 489 13 9 1296 1758 126879402 126879874 8.340000e-156 560.0
32 TraesCS4A01G055100 chr7D 93.000 100 6 1 1515 1614 564687470 564687568 9.960000e-31 145.0
33 TraesCS4A01G055100 chr2D 86.382 492 52 9 58 538 594503636 594503149 1.090000e-144 523.0
34 TraesCS4A01G055100 chr5A 85.569 492 52 11 58 537 363422175 363422659 6.640000e-137 497.0
35 TraesCS4A01G055100 chr1B 93.333 315 17 3 1299 1612 658481944 658481633 2.420000e-126 462.0
36 TraesCS4A01G055100 chr1B 97.059 34 1 0 3291 3324 491080928 491080961 1.330000e-04 58.4
37 TraesCS4A01G055100 chr3B 85.553 443 47 11 115 544 189486355 189485917 6.780000e-122 448.0
38 TraesCS4A01G055100 chr3B 100.000 42 0 0 58 99 189486394 189486353 1.020000e-10 78.7
39 TraesCS4A01G055100 chr6B 82.819 518 56 16 37 532 6641076 6640570 1.900000e-117 433.0
40 TraesCS4A01G055100 chr1D 93.143 175 12 0 1304 1478 8013484 8013310 1.230000e-64 257.0
41 TraesCS4A01G055100 chrUn 100.000 102 0 0 3342 3443 170739601 170739500 4.540000e-44 189.0
42 TraesCS4A01G055100 chrUn 100.000 102 0 0 3342 3443 212408842 212408741 4.540000e-44 189.0
43 TraesCS4A01G055100 chrUn 100.000 102 0 0 3342 3443 261800502 261800401 4.540000e-44 189.0
44 TraesCS4A01G055100 chrUn 100.000 102 0 0 3342 3443 344411639 344411538 4.540000e-44 189.0
45 TraesCS4A01G055100 chrUn 97.321 112 1 2 3334 3443 448337128 448337239 4.540000e-44 189.0
46 TraesCS4A01G055100 chrUn 100.000 102 0 0 3342 3443 457377522 457377421 4.540000e-44 189.0
47 TraesCS4A01G055100 chrUn 97.321 112 1 2 3334 3443 458696927 458697038 4.540000e-44 189.0
48 TraesCS4A01G055100 chrUn 100.000 102 0 0 3342 3443 466829815 466829714 4.540000e-44 189.0
49 TraesCS4A01G055100 chr6D 93.590 78 4 1 1723 1799 7294671 7294748 7.810000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G055100 chr4A 46146357 46149799 3442 False 6359 6359 100.000 1 3443 1 chr4A.!!$F1 3442
1 TraesCS4A01G055100 chr4D 418773796 418775726 1930 False 2918 2918 94.209 658 2559 1 chr4D.!!$F2 1901
2 TraesCS4A01G055100 chr4B 515069716 515071861 2145 True 1492 2843 92.996 727 2666 2 chr4B.!!$R3 1939
3 TraesCS4A01G055100 chr4B 57252082 57252611 529 False 824 824 94.727 2663 3193 1 chr4B.!!$F1 530
4 TraesCS4A01G055100 chr2A 60769727 60770254 527 False 920 920 98.106 2666 3193 1 chr2A.!!$F1 527
5 TraesCS4A01G055100 chr6A 346913272 346913802 530 True 881 881 96.610 2666 3196 1 chr6A.!!$R1 530
6 TraesCS4A01G055100 chr6A 220259522 220260053 531 False 878 878 96.429 2662 3193 1 chr6A.!!$F1 531
7 TraesCS4A01G055100 chr6A 396576823 396577353 530 True 809 809 94.162 2666 3196 1 chr6A.!!$R2 530
8 TraesCS4A01G055100 chr5D 410509330 410509859 529 False 857 857 95.849 2666 3195 1 chr5D.!!$F1 529
9 TraesCS4A01G055100 chr7A 617196212 617196739 527 False 832 832 95.076 2666 3193 1 chr7A.!!$F1 527
10 TraesCS4A01G055100 chr3A 79312269 79312797 528 False 828 828 94.896 2666 3194 1 chr3A.!!$F1 528
11 TraesCS4A01G055100 chr3D 519117922 519118449 527 False 815 815 94.508 2666 3193 1 chr3D.!!$F1 527
12 TraesCS4A01G055100 chr6B 6640570 6641076 506 True 433 433 82.819 37 532 1 chr6B.!!$R1 495

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
616 637 0.036388 GTGCCTTCGAGATGGAACCA 60.036 55.0 8.95 0.0 30.02 3.67 F
853 874 0.676466 TCGTGCCGGCATCATCTTTT 60.676 50.0 35.23 0.0 0.00 2.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1710 1738 0.679002 TCCCGGTGTCCTTCTCGTAG 60.679 60.0 0.0 0.0 0.0 3.51 R
2562 2617 0.693092 ATGTAGGCCCCGCTTAGGAA 60.693 55.0 0.0 0.0 45.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.879103 AGAAGGATTGAAGGCCGAAA 57.121 45.000 0.00 0.00 0.00 3.46
20 21 2.716217 AGAAGGATTGAAGGCCGAAAG 58.284 47.619 0.00 0.00 0.00 2.62
39 40 2.315176 AGGCAATCTCGTAGATCAGCT 58.685 47.619 15.10 0.00 36.50 4.24
83 92 4.042884 GTGTCCTACCCCTAAATTACCCT 58.957 47.826 0.00 0.00 0.00 4.34
98 107 1.224592 CCCTGGTAGACATGTGGGC 59.775 63.158 1.15 0.00 0.00 5.36
99 108 1.274703 CCCTGGTAGACATGTGGGCT 61.275 60.000 1.15 0.00 0.00 5.19
103 112 3.470709 CTGGTAGACATGTGGGCTTATG 58.529 50.000 1.15 0.00 0.00 1.90
130 139 2.038557 GAGTAGGCCTGGACAAACTTCA 59.961 50.000 17.99 0.00 0.00 3.02
132 141 0.846693 AGGCCTGGACAAACTTCAGT 59.153 50.000 3.11 0.00 0.00 3.41
133 142 0.954452 GGCCTGGACAAACTTCAGTG 59.046 55.000 0.00 0.00 0.00 3.66
137 146 3.003378 GCCTGGACAAACTTCAGTGTAAC 59.997 47.826 0.00 0.00 0.00 2.50
179 188 1.320555 CGTATTTCAGCGTCAACTCGG 59.679 52.381 0.00 0.00 0.00 4.63
184 193 2.049063 AGCGTCAACTCGGACTGC 60.049 61.111 0.00 0.00 37.48 4.40
199 208 0.465705 ACTGCTGGGATGGATGTACG 59.534 55.000 0.00 0.00 0.00 3.67
200 209 0.882042 CTGCTGGGATGGATGTACGC 60.882 60.000 0.00 0.00 0.00 4.42
203 212 1.070134 GCTGGGATGGATGTACGCTTA 59.930 52.381 0.00 0.00 0.00 3.09
204 213 2.868044 GCTGGGATGGATGTACGCTTAG 60.868 54.545 0.00 0.00 0.00 2.18
205 214 2.365617 CTGGGATGGATGTACGCTTAGT 59.634 50.000 0.00 0.00 0.00 2.24
207 216 3.199071 TGGGATGGATGTACGCTTAGTTT 59.801 43.478 0.00 0.00 0.00 2.66
210 219 5.818857 GGGATGGATGTACGCTTAGTTTTTA 59.181 40.000 0.00 0.00 0.00 1.52
212 221 7.012989 GGGATGGATGTACGCTTAGTTTTTAAT 59.987 37.037 0.00 0.00 0.00 1.40
224 233 6.741358 GCTTAGTTTTTAATTAGCAGGTCGTG 59.259 38.462 0.00 0.00 0.00 4.35
244 253 2.807247 GTTCAAACCACACCTGCCT 58.193 52.632 0.00 0.00 0.00 4.75
245 254 1.975660 GTTCAAACCACACCTGCCTA 58.024 50.000 0.00 0.00 0.00 3.93
246 255 2.303175 GTTCAAACCACACCTGCCTAA 58.697 47.619 0.00 0.00 0.00 2.69
258 267 2.368548 ACCTGCCTAAAAGCCCTTTTTG 59.631 45.455 10.87 9.09 42.22 2.44
259 268 2.416747 CTGCCTAAAAGCCCTTTTTGC 58.583 47.619 10.87 13.43 42.22 3.68
260 269 1.765314 TGCCTAAAAGCCCTTTTTGCA 59.235 42.857 18.33 18.33 41.90 4.08
262 271 3.181446 TGCCTAAAAGCCCTTTTTGCATT 60.181 39.130 18.33 0.00 40.64 3.56
263 272 3.189080 GCCTAAAAGCCCTTTTTGCATTG 59.811 43.478 10.87 0.00 42.22 2.82
264 273 3.189080 CCTAAAAGCCCTTTTTGCATTGC 59.811 43.478 10.87 0.46 42.22 3.56
265 274 2.345124 AAAGCCCTTTTTGCATTGCA 57.655 40.000 7.38 7.38 36.47 4.08
269 278 2.554893 AGCCCTTTTTGCATTGCATTTG 59.445 40.909 12.95 3.62 38.76 2.32
270 279 2.553172 GCCCTTTTTGCATTGCATTTGA 59.447 40.909 12.95 0.00 38.76 2.69
271 280 3.365565 GCCCTTTTTGCATTGCATTTGAG 60.366 43.478 12.95 8.24 38.76 3.02
282 291 4.734398 TTGCATTTGAGGTCTTTTGTGT 57.266 36.364 0.00 0.00 0.00 3.72
284 293 2.796593 GCATTTGAGGTCTTTTGTGTGC 59.203 45.455 0.00 0.00 0.00 4.57
286 295 4.431809 CATTTGAGGTCTTTTGTGTGCAA 58.568 39.130 0.00 0.00 0.00 4.08
296 305 9.777297 AGGTCTTTTGTGTGCAATTAAATAAAT 57.223 25.926 0.00 0.00 34.18 1.40
310 319 8.379902 CAATTAAATAAATTGCGAGGGTGTTTC 58.620 33.333 0.00 0.00 45.87 2.78
311 320 5.722021 AAATAAATTGCGAGGGTGTTTCT 57.278 34.783 0.00 0.00 0.00 2.52
313 322 6.827586 AATAAATTGCGAGGGTGTTTCTTA 57.172 33.333 0.00 0.00 0.00 2.10
314 323 7.404671 AATAAATTGCGAGGGTGTTTCTTAT 57.595 32.000 0.00 0.00 0.00 1.73
318 327 5.873179 TTGCGAGGGTGTTTCTTATAAAG 57.127 39.130 0.00 0.00 0.00 1.85
320 329 5.553123 TGCGAGGGTGTTTCTTATAAAGAA 58.447 37.500 0.00 0.00 45.30 2.52
321 330 6.177610 TGCGAGGGTGTTTCTTATAAAGAAT 58.822 36.000 3.12 0.00 46.15 2.40
322 331 6.657541 TGCGAGGGTGTTTCTTATAAAGAATT 59.342 34.615 3.12 0.00 46.15 2.17
325 334 8.512138 CGAGGGTGTTTCTTATAAAGAATTTGT 58.488 33.333 3.12 0.00 46.15 2.83
326 335 9.626045 GAGGGTGTTTCTTATAAAGAATTTGTG 57.374 33.333 3.12 0.00 46.15 3.33
327 336 9.143155 AGGGTGTTTCTTATAAAGAATTTGTGT 57.857 29.630 3.12 0.00 46.15 3.72
328 337 9.191995 GGGTGTTTCTTATAAAGAATTTGTGTG 57.808 33.333 3.12 0.00 46.15 3.82
359 368 2.320587 CGTCTTGTGCACTCCCAGC 61.321 63.158 19.41 2.77 0.00 4.85
362 371 1.303888 CTTGTGCACTCCCAGCCAT 60.304 57.895 19.41 0.00 0.00 4.40
368 377 0.895100 GCACTCCCAGCCATTGACAA 60.895 55.000 0.00 0.00 0.00 3.18
369 378 0.883833 CACTCCCAGCCATTGACAAC 59.116 55.000 0.00 0.00 0.00 3.32
379 396 1.614051 CCATTGACAACTGCCAGCCTA 60.614 52.381 0.00 0.00 0.00 3.93
385 402 4.767255 ACTGCCAGCCTAGCACGC 62.767 66.667 0.00 0.00 36.01 5.34
391 408 1.746615 CAGCCTAGCACGCCATGTT 60.747 57.895 0.00 0.00 0.00 2.71
415 432 3.528853 CCATACGGCTGGGTACGA 58.471 61.111 0.00 0.00 32.28 3.43
433 450 2.756760 ACGAGAGGAAGCACCGTATTTA 59.243 45.455 0.00 0.00 44.74 1.40
436 453 3.858247 AGAGGAAGCACCGTATTTACAC 58.142 45.455 0.00 0.00 44.74 2.90
437 454 3.259876 AGAGGAAGCACCGTATTTACACA 59.740 43.478 0.00 0.00 44.74 3.72
450 467 6.305399 CCGTATTTACACAAGAATGCAAGTTG 59.695 38.462 0.00 0.00 0.00 3.16
453 470 6.403866 TTTACACAAGAATGCAAGTTGGAT 57.596 33.333 3.70 3.70 0.00 3.41
464 481 5.999205 TGCAAGTTGGATGACCATAAATT 57.001 34.783 4.75 0.00 46.34 1.82
473 490 9.233232 GTTGGATGACCATAAATTCGTATTTTC 57.767 33.333 5.29 0.00 46.34 2.29
474 491 8.512966 TGGATGACCATAAATTCGTATTTTCA 57.487 30.769 5.29 4.07 41.77 2.69
475 492 8.961634 TGGATGACCATAAATTCGTATTTTCAA 58.038 29.630 5.29 0.00 41.77 2.69
476 493 9.796120 GGATGACCATAAATTCGTATTTTCAAA 57.204 29.630 5.29 0.00 34.56 2.69
505 526 6.431198 AACACTAAACTGAACATCAAACGT 57.569 33.333 0.00 0.00 0.00 3.99
580 601 9.541143 CATGGTTAAAATATGACCCAAAATACC 57.459 33.333 0.00 0.00 32.39 2.73
581 602 7.773149 TGGTTAAAATATGACCCAAAATACCG 58.227 34.615 0.00 0.00 32.39 4.02
582 603 7.147880 TGGTTAAAATATGACCCAAAATACCGG 60.148 37.037 0.00 0.00 32.39 5.28
588 609 3.489391 CCCAAAATACCGGGGAGAC 57.511 57.895 6.32 0.00 45.08 3.36
589 610 0.916809 CCCAAAATACCGGGGAGACT 59.083 55.000 6.32 0.00 45.08 3.24
590 611 2.121129 CCCAAAATACCGGGGAGACTA 58.879 52.381 6.32 0.00 45.08 2.59
591 612 2.104281 CCCAAAATACCGGGGAGACTAG 59.896 54.545 6.32 0.00 45.08 2.57
592 613 2.770232 CCAAAATACCGGGGAGACTAGT 59.230 50.000 6.32 0.00 0.00 2.57
593 614 3.962718 CCAAAATACCGGGGAGACTAGTA 59.037 47.826 6.32 0.00 0.00 1.82
594 615 4.406649 CCAAAATACCGGGGAGACTAGTAA 59.593 45.833 6.32 0.00 0.00 2.24
595 616 5.104817 CCAAAATACCGGGGAGACTAGTAAA 60.105 44.000 6.32 0.00 0.00 2.01
596 617 5.604758 AAATACCGGGGAGACTAGTAAAC 57.395 43.478 6.32 0.00 0.00 2.01
597 618 1.467920 ACCGGGGAGACTAGTAAACG 58.532 55.000 6.32 0.00 0.00 3.60
598 619 1.272147 ACCGGGGAGACTAGTAAACGT 60.272 52.381 6.32 0.00 0.00 3.99
599 620 1.133790 CCGGGGAGACTAGTAAACGTG 59.866 57.143 0.00 0.00 0.00 4.49
600 621 1.468736 CGGGGAGACTAGTAAACGTGC 60.469 57.143 0.00 0.00 0.00 5.34
601 622 1.134877 GGGGAGACTAGTAAACGTGCC 60.135 57.143 0.00 0.00 0.00 5.01
602 623 1.823610 GGGAGACTAGTAAACGTGCCT 59.176 52.381 0.00 0.00 0.00 4.75
603 624 2.233186 GGGAGACTAGTAAACGTGCCTT 59.767 50.000 0.00 0.00 0.00 4.35
604 625 3.509740 GGAGACTAGTAAACGTGCCTTC 58.490 50.000 0.00 0.00 0.00 3.46
605 626 3.169733 GAGACTAGTAAACGTGCCTTCG 58.830 50.000 0.00 0.00 0.00 3.79
606 627 2.816087 AGACTAGTAAACGTGCCTTCGA 59.184 45.455 0.00 0.00 34.70 3.71
607 628 3.119919 AGACTAGTAAACGTGCCTTCGAG 60.120 47.826 0.00 0.00 34.70 4.04
608 629 2.816087 ACTAGTAAACGTGCCTTCGAGA 59.184 45.455 0.00 0.00 34.70 4.04
609 630 3.442977 ACTAGTAAACGTGCCTTCGAGAT 59.557 43.478 0.00 0.00 34.70 2.75
610 631 2.607187 AGTAAACGTGCCTTCGAGATG 58.393 47.619 0.00 0.00 34.70 2.90
611 632 1.659098 GTAAACGTGCCTTCGAGATGG 59.341 52.381 0.00 1.09 34.70 3.51
612 633 0.320374 AAACGTGCCTTCGAGATGGA 59.680 50.000 8.95 0.00 34.70 3.41
613 634 0.320374 AACGTGCCTTCGAGATGGAA 59.680 50.000 8.95 0.00 34.70 3.53
614 635 0.389948 ACGTGCCTTCGAGATGGAAC 60.390 55.000 8.95 7.50 32.31 3.62
615 636 1.084370 CGTGCCTTCGAGATGGAACC 61.084 60.000 9.72 0.00 32.04 3.62
616 637 0.036388 GTGCCTTCGAGATGGAACCA 60.036 55.000 8.95 0.00 30.02 3.67
617 638 0.690192 TGCCTTCGAGATGGAACCAA 59.310 50.000 8.95 0.00 0.00 3.67
618 639 1.339055 TGCCTTCGAGATGGAACCAAG 60.339 52.381 8.95 0.00 0.00 3.61
619 640 1.066143 GCCTTCGAGATGGAACCAAGA 60.066 52.381 8.95 0.00 0.00 3.02
620 641 2.615493 GCCTTCGAGATGGAACCAAGAA 60.615 50.000 8.95 1.83 0.00 2.52
621 642 3.265791 CCTTCGAGATGGAACCAAGAAG 58.734 50.000 16.65 16.65 34.94 2.85
622 643 3.055819 CCTTCGAGATGGAACCAAGAAGA 60.056 47.826 21.12 9.33 36.64 2.87
623 644 4.563580 CCTTCGAGATGGAACCAAGAAGAA 60.564 45.833 21.12 13.98 36.64 2.52
624 645 4.617253 TCGAGATGGAACCAAGAAGAAA 57.383 40.909 0.00 0.00 0.00 2.52
625 646 5.165961 TCGAGATGGAACCAAGAAGAAAT 57.834 39.130 0.00 0.00 0.00 2.17
626 647 5.178797 TCGAGATGGAACCAAGAAGAAATC 58.821 41.667 0.00 0.00 0.00 2.17
627 648 4.937620 CGAGATGGAACCAAGAAGAAATCA 59.062 41.667 0.00 0.00 0.00 2.57
628 649 5.412594 CGAGATGGAACCAAGAAGAAATCAA 59.587 40.000 0.00 0.00 0.00 2.57
629 650 6.072508 CGAGATGGAACCAAGAAGAAATCAAA 60.073 38.462 0.00 0.00 0.00 2.69
630 651 7.362401 CGAGATGGAACCAAGAAGAAATCAAAT 60.362 37.037 0.00 0.00 0.00 2.32
631 652 7.834803 AGATGGAACCAAGAAGAAATCAAATC 58.165 34.615 0.00 0.00 0.00 2.17
632 653 6.975196 TGGAACCAAGAAGAAATCAAATCA 57.025 33.333 0.00 0.00 0.00 2.57
633 654 7.358770 TGGAACCAAGAAGAAATCAAATCAA 57.641 32.000 0.00 0.00 0.00 2.57
634 655 7.790027 TGGAACCAAGAAGAAATCAAATCAAA 58.210 30.769 0.00 0.00 0.00 2.69
635 656 7.710475 TGGAACCAAGAAGAAATCAAATCAAAC 59.290 33.333 0.00 0.00 0.00 2.93
636 657 7.096065 GGAACCAAGAAGAAATCAAATCAAACG 60.096 37.037 0.00 0.00 0.00 3.60
637 658 7.038154 ACCAAGAAGAAATCAAATCAAACGA 57.962 32.000 0.00 0.00 0.00 3.85
638 659 6.918022 ACCAAGAAGAAATCAAATCAAACGAC 59.082 34.615 0.00 0.00 0.00 4.34
639 660 7.141363 CCAAGAAGAAATCAAATCAAACGACT 58.859 34.615 0.00 0.00 0.00 4.18
640 661 8.289618 CCAAGAAGAAATCAAATCAAACGACTA 58.710 33.333 0.00 0.00 0.00 2.59
641 662 9.831737 CAAGAAGAAATCAAATCAAACGACTAT 57.168 29.630 0.00 0.00 0.00 2.12
644 665 9.409949 GAAGAAATCAAATCAAACGACTATACG 57.590 33.333 0.00 0.00 39.31 3.06
645 666 7.399523 AGAAATCAAATCAAACGACTATACGC 58.600 34.615 0.00 0.00 36.70 4.42
646 667 6.656314 AATCAAATCAAACGACTATACGCA 57.344 33.333 0.00 0.00 36.70 5.24
647 668 6.656314 ATCAAATCAAACGACTATACGCAA 57.344 33.333 0.00 0.00 36.70 4.85
677 698 3.324993 TGGTTAACGGCCTTAACTAACG 58.675 45.455 24.54 5.12 42.76 3.18
680 701 4.268644 GGTTAACGGCCTTAACTAACGATC 59.731 45.833 24.54 11.61 42.76 3.69
682 703 3.160777 ACGGCCTTAACTAACGATCTG 57.839 47.619 0.00 0.00 0.00 2.90
707 728 2.093181 CCGGTGATGTAACCAATGGAGA 60.093 50.000 6.16 0.00 40.53 3.71
716 737 5.277250 TGTAACCAATGGAGACCTATCTGA 58.723 41.667 6.16 0.00 34.34 3.27
722 743 5.543405 CCAATGGAGACCTATCTGAATCTCT 59.457 44.000 0.00 0.00 38.14 3.10
756 777 2.655044 GCCGTTGCTGCAACACAC 60.655 61.111 35.94 23.92 43.70 3.82
757 778 2.797330 CCGTTGCTGCAACACACA 59.203 55.556 35.94 5.84 43.70 3.72
770 791 3.690422 CAACACACAGCAAACGTGTAAT 58.310 40.909 0.00 0.00 45.63 1.89
783 804 3.841643 ACGTGTAATCTTTGTACCGGAG 58.158 45.455 9.46 0.00 0.00 4.63
790 811 3.587797 TCTTTGTACCGGAGCAGTAAG 57.412 47.619 9.46 8.14 0.00 2.34
853 874 0.676466 TCGTGCCGGCATCATCTTTT 60.676 50.000 35.23 0.00 0.00 2.27
938 966 2.040813 AGCATCCATCCTGTTCAAGTGT 59.959 45.455 0.00 0.00 0.00 3.55
947 975 1.792367 CTGTTCAAGTGTTCGATCGCA 59.208 47.619 11.09 0.00 0.00 5.10
950 978 1.225475 CAAGTGTTCGATCGCACGC 60.225 57.895 21.29 21.29 40.26 5.34
1065 1093 1.646912 TGTACTTCATCCCGTTCCCA 58.353 50.000 0.00 0.00 0.00 4.37
1146 1174 4.083862 GCCACCCTCGTCCTCACC 62.084 72.222 0.00 0.00 0.00 4.02
1694 1722 4.415332 GTTCGCCGACCTCGAGCA 62.415 66.667 6.99 0.00 43.02 4.26
1710 1738 0.539051 AGCAGAGGTACATGGAGCAC 59.461 55.000 10.34 2.68 0.00 4.40
1768 1796 2.805353 CGGTCTGCCTCGTCAACG 60.805 66.667 0.00 0.00 41.45 4.10
1770 1798 3.112709 GTCTGCCTCGTCAACGGC 61.113 66.667 2.31 0.00 46.46 5.68
2349 2398 3.752167 GGGGAGGTCGGGGAGAGA 61.752 72.222 0.00 0.00 0.00 3.10
2518 2567 1.006825 CTCAATTCGCGTCGTGTCCA 61.007 55.000 5.77 0.00 0.00 4.02
2521 2570 0.876777 AATTCGCGTCGTGTCCACAA 60.877 50.000 5.77 0.00 0.00 3.33
2577 2804 3.798511 GCTTCCTAAGCGGGGCCT 61.799 66.667 0.84 0.00 45.74 5.19
2578 2805 2.440817 GCTTCCTAAGCGGGGCCTA 61.441 63.158 0.84 0.00 45.74 3.93
2579 2806 1.446366 CTTCCTAAGCGGGGCCTAC 59.554 63.158 0.84 0.00 0.00 3.18
2581 2808 0.693092 TTCCTAAGCGGGGCCTACAT 60.693 55.000 0.84 0.00 0.00 2.29
2582 2809 1.071471 CCTAAGCGGGGCCTACATG 59.929 63.158 0.84 0.00 0.00 3.21
2583 2810 1.407656 CCTAAGCGGGGCCTACATGA 61.408 60.000 0.84 0.00 0.00 3.07
2584 2811 0.687354 CTAAGCGGGGCCTACATGAT 59.313 55.000 0.84 0.00 0.00 2.45
2587 2814 2.247699 AGCGGGGCCTACATGATATA 57.752 50.000 0.84 0.00 0.00 0.86
2659 2890 6.655003 TGAGATAATCAGACACTTTGGGTTTC 59.345 38.462 0.00 0.00 32.77 2.78
2730 2961 2.295349 TCGGAAGTTCAGCTCGTTAAGT 59.705 45.455 5.01 0.00 0.00 2.24
2753 2984 4.740268 TCGTAGCTCGCTTCTTAATGAAA 58.260 39.130 0.00 0.00 39.67 2.69
3196 3427 3.297736 CTCGTTAGTCCACCCCTATTCT 58.702 50.000 0.00 0.00 0.00 2.40
3197 3428 3.705072 CTCGTTAGTCCACCCCTATTCTT 59.295 47.826 0.00 0.00 0.00 2.52
3198 3429 3.449737 TCGTTAGTCCACCCCTATTCTTG 59.550 47.826 0.00 0.00 0.00 3.02
3199 3430 3.431766 CGTTAGTCCACCCCTATTCTTGG 60.432 52.174 0.00 0.00 0.00 3.61
3200 3431 2.661176 AGTCCACCCCTATTCTTGGA 57.339 50.000 0.00 0.00 35.71 3.53
3201 3432 3.151542 AGTCCACCCCTATTCTTGGAT 57.848 47.619 0.00 0.00 40.27 3.41
3202 3433 3.474920 AGTCCACCCCTATTCTTGGATT 58.525 45.455 0.00 0.00 40.27 3.01
3203 3434 4.641868 AGTCCACCCCTATTCTTGGATTA 58.358 43.478 0.00 0.00 40.27 1.75
3204 3435 4.660771 AGTCCACCCCTATTCTTGGATTAG 59.339 45.833 0.00 0.00 40.27 1.73
3205 3436 4.658901 GTCCACCCCTATTCTTGGATTAGA 59.341 45.833 0.00 0.00 40.27 2.10
3206 3437 5.132144 GTCCACCCCTATTCTTGGATTAGAA 59.868 44.000 0.00 0.00 40.27 2.10
3207 3438 5.369699 TCCACCCCTATTCTTGGATTAGAAG 59.630 44.000 0.00 0.00 37.55 2.85
3208 3439 5.132816 CCACCCCTATTCTTGGATTAGAAGT 59.867 44.000 0.00 0.00 37.55 3.01
3209 3440 6.353951 CCACCCCTATTCTTGGATTAGAAGTT 60.354 42.308 0.00 0.00 37.55 2.66
3210 3441 7.119387 CACCCCTATTCTTGGATTAGAAGTTT 58.881 38.462 0.00 0.00 37.55 2.66
3211 3442 7.067494 CACCCCTATTCTTGGATTAGAAGTTTG 59.933 40.741 0.00 0.00 37.55 2.93
3212 3443 6.547510 CCCCTATTCTTGGATTAGAAGTTTGG 59.452 42.308 0.00 0.00 37.55 3.28
3213 3444 7.119387 CCCTATTCTTGGATTAGAAGTTTGGT 58.881 38.462 0.00 0.00 37.55 3.67
3214 3445 7.067494 CCCTATTCTTGGATTAGAAGTTTGGTG 59.933 40.741 0.00 0.00 37.55 4.17
3215 3446 7.611855 CCTATTCTTGGATTAGAAGTTTGGTGT 59.388 37.037 0.00 0.00 37.55 4.16
3216 3447 9.667107 CTATTCTTGGATTAGAAGTTTGGTGTA 57.333 33.333 0.00 0.00 37.55 2.90
3218 3449 7.921786 TCTTGGATTAGAAGTTTGGTGTATG 57.078 36.000 0.00 0.00 0.00 2.39
3219 3450 6.884295 TCTTGGATTAGAAGTTTGGTGTATGG 59.116 38.462 0.00 0.00 0.00 2.74
3220 3451 5.505780 TGGATTAGAAGTTTGGTGTATGGG 58.494 41.667 0.00 0.00 0.00 4.00
3221 3452 5.014755 TGGATTAGAAGTTTGGTGTATGGGT 59.985 40.000 0.00 0.00 0.00 4.51
3222 3453 6.215841 TGGATTAGAAGTTTGGTGTATGGGTA 59.784 38.462 0.00 0.00 0.00 3.69
3223 3454 6.766467 GGATTAGAAGTTTGGTGTATGGGTAG 59.234 42.308 0.00 0.00 0.00 3.18
3224 3455 6.691255 TTAGAAGTTTGGTGTATGGGTAGT 57.309 37.500 0.00 0.00 0.00 2.73
3225 3456 5.578157 AGAAGTTTGGTGTATGGGTAGTT 57.422 39.130 0.00 0.00 0.00 2.24
3226 3457 5.948842 AGAAGTTTGGTGTATGGGTAGTTT 58.051 37.500 0.00 0.00 0.00 2.66
3227 3458 6.370453 AGAAGTTTGGTGTATGGGTAGTTTT 58.630 36.000 0.00 0.00 0.00 2.43
3228 3459 6.837048 AGAAGTTTGGTGTATGGGTAGTTTTT 59.163 34.615 0.00 0.00 0.00 1.94
3246 3477 3.399952 TTTTTAGGGGTGGTGTTTGGA 57.600 42.857 0.00 0.00 0.00 3.53
3247 3478 3.621682 TTTTAGGGGTGGTGTTTGGAT 57.378 42.857 0.00 0.00 0.00 3.41
3248 3479 4.743705 TTTTAGGGGTGGTGTTTGGATA 57.256 40.909 0.00 0.00 0.00 2.59
3249 3480 4.310022 TTTAGGGGTGGTGTTTGGATAG 57.690 45.455 0.00 0.00 0.00 2.08
3250 3481 0.999712 AGGGGTGGTGTTTGGATAGG 59.000 55.000 0.00 0.00 0.00 2.57
3251 3482 0.702316 GGGGTGGTGTTTGGATAGGT 59.298 55.000 0.00 0.00 0.00 3.08
3252 3483 1.917568 GGGGTGGTGTTTGGATAGGTA 59.082 52.381 0.00 0.00 0.00 3.08
3253 3484 2.092592 GGGGTGGTGTTTGGATAGGTAG 60.093 54.545 0.00 0.00 0.00 3.18
3254 3485 2.092592 GGGTGGTGTTTGGATAGGTAGG 60.093 54.545 0.00 0.00 0.00 3.18
3255 3486 2.092592 GGTGGTGTTTGGATAGGTAGGG 60.093 54.545 0.00 0.00 0.00 3.53
3256 3487 2.841881 GTGGTGTTTGGATAGGTAGGGA 59.158 50.000 0.00 0.00 0.00 4.20
3257 3488 3.264964 GTGGTGTTTGGATAGGTAGGGAA 59.735 47.826 0.00 0.00 0.00 3.97
3258 3489 4.079958 GTGGTGTTTGGATAGGTAGGGAAT 60.080 45.833 0.00 0.00 0.00 3.01
3259 3490 4.080015 TGGTGTTTGGATAGGTAGGGAATG 60.080 45.833 0.00 0.00 0.00 2.67
3260 3491 3.883489 GTGTTTGGATAGGTAGGGAATGC 59.117 47.826 0.00 0.00 0.00 3.56
3261 3492 3.525609 TGTTTGGATAGGTAGGGAATGCA 59.474 43.478 0.00 0.00 0.00 3.96
3262 3493 4.137543 GTTTGGATAGGTAGGGAATGCAG 58.862 47.826 0.00 0.00 0.00 4.41
3263 3494 3.344535 TGGATAGGTAGGGAATGCAGA 57.655 47.619 0.00 0.00 0.00 4.26
3264 3495 3.664320 TGGATAGGTAGGGAATGCAGAA 58.336 45.455 0.00 0.00 0.00 3.02
3265 3496 3.391296 TGGATAGGTAGGGAATGCAGAAC 59.609 47.826 0.00 0.00 0.00 3.01
3266 3497 3.555168 GGATAGGTAGGGAATGCAGAACG 60.555 52.174 0.00 0.00 0.00 3.95
3267 3498 1.276622 AGGTAGGGAATGCAGAACGT 58.723 50.000 0.00 0.00 0.00 3.99
3268 3499 1.066143 AGGTAGGGAATGCAGAACGTG 60.066 52.381 0.00 0.00 0.00 4.49
3269 3500 1.369625 GTAGGGAATGCAGAACGTGG 58.630 55.000 0.00 0.00 0.00 4.94
3270 3501 1.066430 GTAGGGAATGCAGAACGTGGA 60.066 52.381 0.00 0.00 0.00 4.02
3271 3502 0.036010 AGGGAATGCAGAACGTGGAG 60.036 55.000 0.00 0.00 0.00 3.86
3272 3503 1.026718 GGGAATGCAGAACGTGGAGG 61.027 60.000 0.00 0.00 0.00 4.30
3273 3504 1.026718 GGAATGCAGAACGTGGAGGG 61.027 60.000 0.00 0.00 0.00 4.30
3274 3505 1.648467 GAATGCAGAACGTGGAGGGC 61.648 60.000 0.00 0.00 0.00 5.19
3275 3506 3.628646 ATGCAGAACGTGGAGGGCC 62.629 63.158 0.00 0.00 0.00 5.80
3277 3508 4.003788 CAGAACGTGGAGGGCCGT 62.004 66.667 0.00 0.00 39.32 5.68
3278 3509 3.692406 AGAACGTGGAGGGCCGTC 61.692 66.667 17.33 17.33 36.04 4.79
3279 3510 3.692406 GAACGTGGAGGGCCGTCT 61.692 66.667 23.90 2.88 36.04 4.18
3280 3511 3.236003 GAACGTGGAGGGCCGTCTT 62.236 63.158 23.90 11.08 36.04 3.01
3281 3512 3.530910 AACGTGGAGGGCCGTCTTG 62.531 63.158 23.90 15.87 36.04 3.02
3282 3513 4.760047 CGTGGAGGGCCGTCTTGG 62.760 72.222 23.90 10.04 42.50 3.61
3291 3522 2.970639 CCGTCTTGGCTCTCGGAA 59.029 61.111 0.00 0.00 44.86 4.30
3292 3523 1.153745 CCGTCTTGGCTCTCGGAAG 60.154 63.158 0.00 0.00 44.86 3.46
3293 3524 1.587054 CGTCTTGGCTCTCGGAAGT 59.413 57.895 0.00 0.00 0.00 3.01
3294 3525 0.809385 CGTCTTGGCTCTCGGAAGTA 59.191 55.000 0.00 0.00 0.00 2.24
3295 3526 1.467713 CGTCTTGGCTCTCGGAAGTAC 60.468 57.143 0.00 0.00 0.00 2.73
3296 3527 1.819903 GTCTTGGCTCTCGGAAGTACT 59.180 52.381 0.00 0.00 0.00 2.73
3297 3528 2.093106 TCTTGGCTCTCGGAAGTACTC 58.907 52.381 0.00 0.00 0.00 2.59
3298 3529 1.135333 CTTGGCTCTCGGAAGTACTCC 59.865 57.143 0.00 0.00 41.40 3.85
3299 3530 0.683504 TGGCTCTCGGAAGTACTCCC 60.684 60.000 0.00 0.00 41.87 4.30
3300 3531 0.396001 GGCTCTCGGAAGTACTCCCT 60.396 60.000 0.00 0.00 41.87 4.20
3301 3532 1.026584 GCTCTCGGAAGTACTCCCTC 58.973 60.000 0.00 0.00 41.87 4.30
3302 3533 1.409101 GCTCTCGGAAGTACTCCCTCT 60.409 57.143 0.00 0.00 41.87 3.69
3303 3534 2.294074 CTCTCGGAAGTACTCCCTCTG 58.706 57.143 0.00 0.00 41.87 3.35
3304 3535 1.634459 TCTCGGAAGTACTCCCTCTGT 59.366 52.381 0.00 0.00 41.87 3.41
3305 3536 2.041350 TCTCGGAAGTACTCCCTCTGTT 59.959 50.000 0.00 0.00 41.87 3.16
3306 3537 2.826725 CTCGGAAGTACTCCCTCTGTTT 59.173 50.000 0.00 0.00 41.87 2.83
3307 3538 2.824341 TCGGAAGTACTCCCTCTGTTTC 59.176 50.000 0.00 0.00 41.87 2.78
3308 3539 2.561419 CGGAAGTACTCCCTCTGTTTCA 59.439 50.000 0.00 0.00 41.87 2.69
3309 3540 3.006537 CGGAAGTACTCCCTCTGTTTCAA 59.993 47.826 0.00 0.00 41.87 2.69
3310 3541 4.502604 CGGAAGTACTCCCTCTGTTTCAAA 60.503 45.833 0.00 0.00 41.87 2.69
3311 3542 5.374071 GGAAGTACTCCCTCTGTTTCAAAA 58.626 41.667 0.00 0.00 38.44 2.44
3312 3543 6.004574 GGAAGTACTCCCTCTGTTTCAAAAT 58.995 40.000 0.00 0.00 38.44 1.82
3313 3544 7.166167 GGAAGTACTCCCTCTGTTTCAAAATA 58.834 38.462 0.00 0.00 38.44 1.40
3314 3545 7.334671 GGAAGTACTCCCTCTGTTTCAAAATAG 59.665 40.741 0.00 0.00 38.44 1.73
3315 3546 7.554959 AGTACTCCCTCTGTTTCAAAATAGA 57.445 36.000 0.00 2.56 35.32 1.98
3316 3547 8.152023 AGTACTCCCTCTGTTTCAAAATAGAT 57.848 34.615 2.91 0.00 35.92 1.98
3317 3548 8.043710 AGTACTCCCTCTGTTTCAAAATAGATG 58.956 37.037 2.91 1.27 35.92 2.90
3318 3549 5.649831 ACTCCCTCTGTTTCAAAATAGATGC 59.350 40.000 2.91 0.00 35.92 3.91
3319 3550 4.949856 TCCCTCTGTTTCAAAATAGATGCC 59.050 41.667 2.91 0.00 35.92 4.40
3320 3551 4.952335 CCCTCTGTTTCAAAATAGATGCCT 59.048 41.667 2.91 0.00 35.92 4.75
3321 3552 5.067023 CCCTCTGTTTCAAAATAGATGCCTC 59.933 44.000 2.91 0.00 35.92 4.70
3322 3553 5.649395 CCTCTGTTTCAAAATAGATGCCTCA 59.351 40.000 2.91 0.00 35.92 3.86
3323 3554 6.151648 CCTCTGTTTCAAAATAGATGCCTCAA 59.848 38.462 2.91 0.00 35.92 3.02
3324 3555 6.913170 TCTGTTTCAAAATAGATGCCTCAAC 58.087 36.000 0.00 0.00 32.24 3.18
3325 3556 6.716628 TCTGTTTCAAAATAGATGCCTCAACT 59.283 34.615 0.00 0.00 32.24 3.16
3326 3557 6.680810 TGTTTCAAAATAGATGCCTCAACTG 58.319 36.000 0.00 0.00 0.00 3.16
3327 3558 4.970662 TCAAAATAGATGCCTCAACTGC 57.029 40.909 0.00 0.00 0.00 4.40
3328 3559 4.334552 TCAAAATAGATGCCTCAACTGCA 58.665 39.130 0.00 0.00 43.97 4.41
3335 3566 1.838112 TGCCTCAACTGCATTAAGGG 58.162 50.000 7.31 0.53 32.85 3.95
3336 3567 1.354031 TGCCTCAACTGCATTAAGGGA 59.646 47.619 7.31 2.52 32.85 4.20
3337 3568 2.019984 GCCTCAACTGCATTAAGGGAG 58.980 52.381 7.12 7.12 0.00 4.30
3338 3569 2.648059 CCTCAACTGCATTAAGGGAGG 58.352 52.381 13.32 4.49 36.88 4.30
3339 3570 2.239654 CCTCAACTGCATTAAGGGAGGA 59.760 50.000 13.32 0.99 41.69 3.71
3340 3571 3.308402 CCTCAACTGCATTAAGGGAGGAA 60.308 47.826 13.32 0.00 41.69 3.36
3341 3572 4.530875 CTCAACTGCATTAAGGGAGGAAT 58.469 43.478 13.32 0.00 0.00 3.01
3342 3573 4.934356 TCAACTGCATTAAGGGAGGAATT 58.066 39.130 13.32 0.00 0.00 2.17
3343 3574 4.949856 TCAACTGCATTAAGGGAGGAATTC 59.050 41.667 13.32 0.00 0.00 2.17
3344 3575 4.870021 ACTGCATTAAGGGAGGAATTCT 57.130 40.909 13.32 0.00 0.00 2.40
3345 3576 5.198602 ACTGCATTAAGGGAGGAATTCTT 57.801 39.130 13.32 0.00 0.00 2.52
3346 3577 4.952335 ACTGCATTAAGGGAGGAATTCTTG 59.048 41.667 13.32 0.00 0.00 3.02
3347 3578 4.934356 TGCATTAAGGGAGGAATTCTTGT 58.066 39.130 5.23 0.00 0.00 3.16
3348 3579 6.073447 TGCATTAAGGGAGGAATTCTTGTA 57.927 37.500 5.23 0.00 0.00 2.41
3349 3580 6.122277 TGCATTAAGGGAGGAATTCTTGTAG 58.878 40.000 5.23 0.00 0.00 2.74
3350 3581 6.122964 GCATTAAGGGAGGAATTCTTGTAGT 58.877 40.000 5.23 0.00 0.00 2.73
3351 3582 6.038714 GCATTAAGGGAGGAATTCTTGTAGTG 59.961 42.308 5.23 0.00 0.00 2.74
3352 3583 4.576330 AAGGGAGGAATTCTTGTAGTGG 57.424 45.455 5.23 0.00 0.00 4.00
3353 3584 3.803340 AGGGAGGAATTCTTGTAGTGGA 58.197 45.455 5.23 0.00 0.00 4.02
3354 3585 3.777522 AGGGAGGAATTCTTGTAGTGGAG 59.222 47.826 5.23 0.00 0.00 3.86
3355 3586 3.118223 GGGAGGAATTCTTGTAGTGGAGG 60.118 52.174 5.23 0.00 0.00 4.30
3356 3587 3.775316 GGAGGAATTCTTGTAGTGGAGGA 59.225 47.826 5.23 0.00 0.00 3.71
3357 3588 4.141824 GGAGGAATTCTTGTAGTGGAGGAG 60.142 50.000 5.23 0.00 0.00 3.69
3358 3589 4.689062 AGGAATTCTTGTAGTGGAGGAGA 58.311 43.478 5.23 0.00 0.00 3.71
3359 3590 5.094387 AGGAATTCTTGTAGTGGAGGAGAA 58.906 41.667 5.23 0.00 0.00 2.87
3360 3591 5.728741 AGGAATTCTTGTAGTGGAGGAGAAT 59.271 40.000 5.23 0.00 38.36 2.40
3361 3592 6.216456 AGGAATTCTTGTAGTGGAGGAGAATT 59.784 38.462 5.23 8.80 44.97 2.17
3362 3593 6.317391 GGAATTCTTGTAGTGGAGGAGAATTG 59.683 42.308 12.69 0.00 43.36 2.32
3363 3594 5.825593 TTCTTGTAGTGGAGGAGAATTGT 57.174 39.130 0.00 0.00 0.00 2.71
3364 3595 5.152623 TCTTGTAGTGGAGGAGAATTGTG 57.847 43.478 0.00 0.00 0.00 3.33
3365 3596 4.838423 TCTTGTAGTGGAGGAGAATTGTGA 59.162 41.667 0.00 0.00 0.00 3.58
3366 3597 4.537135 TGTAGTGGAGGAGAATTGTGAC 57.463 45.455 0.00 0.00 0.00 3.67
3367 3598 2.751166 AGTGGAGGAGAATTGTGACG 57.249 50.000 0.00 0.00 0.00 4.35
3368 3599 1.079503 GTGGAGGAGAATTGTGACGC 58.920 55.000 0.00 0.00 0.00 5.19
3369 3600 0.036388 TGGAGGAGAATTGTGACGCC 60.036 55.000 0.00 0.00 0.00 5.68
3370 3601 0.744771 GGAGGAGAATTGTGACGCCC 60.745 60.000 0.00 0.00 0.00 6.13
3371 3602 1.079127 AGGAGAATTGTGACGCCCG 60.079 57.895 0.00 0.00 0.00 6.13
3372 3603 2.106683 GGAGAATTGTGACGCCCGG 61.107 63.158 0.00 0.00 0.00 5.73
3373 3604 1.079405 GAGAATTGTGACGCCCGGA 60.079 57.895 0.73 0.00 0.00 5.14
3374 3605 0.462047 GAGAATTGTGACGCCCGGAT 60.462 55.000 0.73 0.00 0.00 4.18
3375 3606 0.828022 AGAATTGTGACGCCCGGATA 59.172 50.000 0.73 0.00 0.00 2.59
3376 3607 1.208535 AGAATTGTGACGCCCGGATAA 59.791 47.619 0.73 0.00 0.00 1.75
3377 3608 2.158813 AGAATTGTGACGCCCGGATAAT 60.159 45.455 0.73 0.00 0.00 1.28
3378 3609 2.341846 ATTGTGACGCCCGGATAATT 57.658 45.000 0.73 0.00 0.00 1.40
3379 3610 2.983907 TTGTGACGCCCGGATAATTA 57.016 45.000 0.73 0.00 0.00 1.40
3380 3611 2.983907 TGTGACGCCCGGATAATTAA 57.016 45.000 0.73 0.00 0.00 1.40
3381 3612 2.828877 TGTGACGCCCGGATAATTAAG 58.171 47.619 0.73 0.00 0.00 1.85
3382 3613 1.529865 GTGACGCCCGGATAATTAAGC 59.470 52.381 0.73 0.00 0.00 3.09
3383 3614 1.414919 TGACGCCCGGATAATTAAGCT 59.585 47.619 0.73 0.00 0.00 3.74
3384 3615 2.629137 TGACGCCCGGATAATTAAGCTA 59.371 45.455 0.73 0.00 0.00 3.32
3385 3616 2.991866 GACGCCCGGATAATTAAGCTAC 59.008 50.000 0.73 0.00 0.00 3.58
3386 3617 2.366266 ACGCCCGGATAATTAAGCTACA 59.634 45.455 0.73 0.00 0.00 2.74
3387 3618 2.993899 CGCCCGGATAATTAAGCTACAG 59.006 50.000 0.73 0.00 0.00 2.74
3388 3619 3.554337 CGCCCGGATAATTAAGCTACAGT 60.554 47.826 0.73 0.00 0.00 3.55
3389 3620 3.746492 GCCCGGATAATTAAGCTACAGTG 59.254 47.826 0.73 0.00 0.00 3.66
3390 3621 4.502604 GCCCGGATAATTAAGCTACAGTGA 60.503 45.833 0.73 0.00 0.00 3.41
3391 3622 5.794894 CCCGGATAATTAAGCTACAGTGAT 58.205 41.667 0.73 0.00 0.00 3.06
3392 3623 6.231211 CCCGGATAATTAAGCTACAGTGATT 58.769 40.000 0.73 0.00 0.00 2.57
3393 3624 6.369065 CCCGGATAATTAAGCTACAGTGATTC 59.631 42.308 0.73 0.00 0.00 2.52
3394 3625 6.369065 CCGGATAATTAAGCTACAGTGATTCC 59.631 42.308 0.00 0.00 0.00 3.01
3395 3626 6.369065 CGGATAATTAAGCTACAGTGATTCCC 59.631 42.308 0.00 0.00 0.00 3.97
3396 3627 6.655425 GGATAATTAAGCTACAGTGATTCCCC 59.345 42.308 0.00 0.00 0.00 4.81
3397 3628 3.536956 TTAAGCTACAGTGATTCCCCG 57.463 47.619 0.00 0.00 0.00 5.73
3398 3629 0.107654 AAGCTACAGTGATTCCCCGC 60.108 55.000 0.00 0.00 0.00 6.13
3399 3630 0.978146 AGCTACAGTGATTCCCCGCT 60.978 55.000 0.00 0.00 0.00 5.52
3400 3631 0.750850 GCTACAGTGATTCCCCGCTA 59.249 55.000 0.00 0.00 0.00 4.26
3401 3632 1.138266 GCTACAGTGATTCCCCGCTAA 59.862 52.381 0.00 0.00 0.00 3.09
3402 3633 2.224305 GCTACAGTGATTCCCCGCTAAT 60.224 50.000 0.00 0.00 0.00 1.73
3403 3634 2.332063 ACAGTGATTCCCCGCTAATG 57.668 50.000 0.00 0.00 0.00 1.90
3404 3635 1.837439 ACAGTGATTCCCCGCTAATGA 59.163 47.619 0.00 0.00 0.00 2.57
3405 3636 2.439507 ACAGTGATTCCCCGCTAATGAT 59.560 45.455 0.00 0.00 0.00 2.45
3406 3637 2.810274 CAGTGATTCCCCGCTAATGATG 59.190 50.000 0.00 0.00 0.00 3.07
3407 3638 1.537202 GTGATTCCCCGCTAATGATGC 59.463 52.381 0.00 0.00 0.00 3.91
3408 3639 1.168714 GATTCCCCGCTAATGATGCC 58.831 55.000 0.00 0.00 0.00 4.40
3409 3640 0.478072 ATTCCCCGCTAATGATGCCA 59.522 50.000 0.00 0.00 0.00 4.92
3410 3641 0.465460 TTCCCCGCTAATGATGCCAC 60.465 55.000 0.00 0.00 0.00 5.01
3411 3642 2.253758 CCCCGCTAATGATGCCACG 61.254 63.158 0.00 0.00 0.00 4.94
3412 3643 1.523711 CCCGCTAATGATGCCACGT 60.524 57.895 0.00 0.00 0.00 4.49
3413 3644 1.498865 CCCGCTAATGATGCCACGTC 61.499 60.000 0.00 0.00 0.00 4.34
3414 3645 0.809636 CCGCTAATGATGCCACGTCA 60.810 55.000 0.00 0.00 0.00 4.35
3415 3646 0.301687 CGCTAATGATGCCACGTCAC 59.698 55.000 0.00 0.00 0.00 3.67
3416 3647 0.657840 GCTAATGATGCCACGTCACC 59.342 55.000 0.00 0.00 0.00 4.02
3417 3648 2.011548 GCTAATGATGCCACGTCACCA 61.012 52.381 0.00 0.00 0.00 4.17
3418 3649 1.665679 CTAATGATGCCACGTCACCAC 59.334 52.381 0.00 0.00 0.00 4.16
3428 3659 2.513159 CGTCACCACGGTTACTGTG 58.487 57.895 16.72 16.72 42.73 3.66
3429 3660 0.031043 CGTCACCACGGTTACTGTGA 59.969 55.000 24.23 9.19 42.73 3.58
3430 3661 1.336517 CGTCACCACGGTTACTGTGAT 60.337 52.381 24.23 5.49 42.73 3.06
3431 3662 2.095110 CGTCACCACGGTTACTGTGATA 60.095 50.000 24.23 7.39 42.73 2.15
3432 3663 3.612241 CGTCACCACGGTTACTGTGATAA 60.612 47.826 24.23 7.07 42.73 1.75
3433 3664 4.309099 GTCACCACGGTTACTGTGATAAA 58.691 43.478 24.23 5.41 39.66 1.40
3434 3665 4.151157 GTCACCACGGTTACTGTGATAAAC 59.849 45.833 24.23 12.87 39.66 2.01
3435 3666 4.039488 TCACCACGGTTACTGTGATAAACT 59.961 41.667 24.23 0.00 39.73 2.66
3436 3667 4.387862 CACCACGGTTACTGTGATAAACTC 59.612 45.833 24.23 0.00 39.73 3.01
3437 3668 4.282703 ACCACGGTTACTGTGATAAACTCT 59.717 41.667 24.23 0.00 39.73 3.24
3438 3669 4.863131 CCACGGTTACTGTGATAAACTCTC 59.137 45.833 24.23 0.00 39.73 3.20
3439 3670 4.557690 CACGGTTACTGTGATAAACTCTCG 59.442 45.833 18.63 0.00 39.73 4.04
3440 3671 4.456911 ACGGTTACTGTGATAAACTCTCGA 59.543 41.667 0.00 0.00 0.00 4.04
3441 3672 5.125097 ACGGTTACTGTGATAAACTCTCGAT 59.875 40.000 0.00 0.00 0.00 3.59
3442 3673 6.317140 ACGGTTACTGTGATAAACTCTCGATA 59.683 38.462 0.00 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.619074 CCTTTCGGCCTTCAATCCTTCT 60.619 50.000 0.00 0.00 0.00 2.85
2 3 1.839424 CCTTTCGGCCTTCAATCCTT 58.161 50.000 0.00 0.00 0.00 3.36
3 4 3.577389 CCTTTCGGCCTTCAATCCT 57.423 52.632 0.00 0.00 0.00 3.24
13 14 4.643499 GATCTACGAGATTGCCTTTCGGC 61.643 52.174 0.00 0.00 45.37 5.54
14 15 2.579207 TCTACGAGATTGCCTTTCGG 57.421 50.000 0.00 0.00 38.58 4.30
15 16 3.706698 TGATCTACGAGATTGCCTTTCG 58.293 45.455 0.00 0.00 34.53 3.46
16 17 3.492756 GCTGATCTACGAGATTGCCTTTC 59.507 47.826 0.00 0.00 34.53 2.62
17 18 3.133721 AGCTGATCTACGAGATTGCCTTT 59.866 43.478 0.00 0.00 34.53 3.11
18 19 2.697751 AGCTGATCTACGAGATTGCCTT 59.302 45.455 0.00 0.00 34.53 4.35
19 20 2.315176 AGCTGATCTACGAGATTGCCT 58.685 47.619 0.00 0.00 34.53 4.75
20 21 2.810439 AGCTGATCTACGAGATTGCC 57.190 50.000 0.00 0.00 34.53 4.52
21 22 4.446051 GGTTAAGCTGATCTACGAGATTGC 59.554 45.833 0.00 3.01 34.53 3.56
22 23 4.985409 GGGTTAAGCTGATCTACGAGATTG 59.015 45.833 4.41 0.00 34.53 2.67
23 24 4.261656 CGGGTTAAGCTGATCTACGAGATT 60.262 45.833 7.77 0.00 34.53 2.40
24 25 3.253677 CGGGTTAAGCTGATCTACGAGAT 59.746 47.826 7.77 0.00 37.73 2.75
25 26 2.617308 CGGGTTAAGCTGATCTACGAGA 59.383 50.000 7.77 0.00 0.00 4.04
26 27 2.358267 ACGGGTTAAGCTGATCTACGAG 59.642 50.000 20.03 0.00 0.00 4.18
27 28 2.372264 ACGGGTTAAGCTGATCTACGA 58.628 47.619 20.03 0.00 0.00 3.43
28 29 2.858344 CAACGGGTTAAGCTGATCTACG 59.142 50.000 20.03 7.95 0.00 3.51
29 30 3.858247 ACAACGGGTTAAGCTGATCTAC 58.142 45.455 20.03 0.00 0.00 2.59
30 31 4.546829 AACAACGGGTTAAGCTGATCTA 57.453 40.909 20.03 0.00 38.15 1.98
31 32 3.418684 AACAACGGGTTAAGCTGATCT 57.581 42.857 20.03 1.53 38.15 2.75
32 33 4.251268 ACTAACAACGGGTTAAGCTGATC 58.749 43.478 20.03 0.00 41.27 2.92
33 34 4.281898 ACTAACAACGGGTTAAGCTGAT 57.718 40.909 20.03 5.41 41.27 2.90
34 35 3.756933 ACTAACAACGGGTTAAGCTGA 57.243 42.857 20.03 0.00 41.27 4.26
35 36 6.335777 AGTATACTAACAACGGGTTAAGCTG 58.664 40.000 11.93 11.93 41.27 4.24
39 40 8.348285 ACACTAGTATACTAACAACGGGTTAA 57.652 34.615 13.51 0.00 41.27 2.01
83 92 2.843730 ACATAAGCCCACATGTCTACCA 59.156 45.455 0.00 0.00 29.34 3.25
98 107 5.047660 GTCCAGGCCTACTCAGATACATAAG 60.048 48.000 3.98 0.00 0.00 1.73
99 108 4.833380 GTCCAGGCCTACTCAGATACATAA 59.167 45.833 3.98 0.00 0.00 1.90
103 112 2.667470 TGTCCAGGCCTACTCAGATAC 58.333 52.381 3.98 0.00 0.00 2.24
143 152 7.735586 GCTGAAATACGCAACTAAAATTTGTTG 59.264 33.333 14.12 14.12 43.50 3.33
179 188 1.539065 CGTACATCCATCCCAGCAGTC 60.539 57.143 0.00 0.00 0.00 3.51
184 193 2.365617 ACTAAGCGTACATCCATCCCAG 59.634 50.000 0.00 0.00 0.00 4.45
199 208 6.741358 CACGACCTGCTAATTAAAAACTAAGC 59.259 38.462 0.00 0.00 0.00 3.09
200 209 7.241376 CCACGACCTGCTAATTAAAAACTAAG 58.759 38.462 0.00 0.00 0.00 2.18
203 212 4.457949 CCCACGACCTGCTAATTAAAAACT 59.542 41.667 0.00 0.00 0.00 2.66
204 213 4.216902 ACCCACGACCTGCTAATTAAAAAC 59.783 41.667 0.00 0.00 0.00 2.43
205 214 4.400120 ACCCACGACCTGCTAATTAAAAA 58.600 39.130 0.00 0.00 0.00 1.94
207 216 3.706600 ACCCACGACCTGCTAATTAAA 57.293 42.857 0.00 0.00 0.00 1.52
210 219 1.349688 TGAACCCACGACCTGCTAATT 59.650 47.619 0.00 0.00 0.00 1.40
212 221 0.759959 TTGAACCCACGACCTGCTAA 59.240 50.000 0.00 0.00 0.00 3.09
215 224 1.652563 GTTTGAACCCACGACCTGC 59.347 57.895 0.00 0.00 0.00 4.85
235 244 0.482887 AAGGGCTTTTAGGCAGGTGT 59.517 50.000 2.60 0.00 43.44 4.16
241 250 2.542020 TGCAAAAAGGGCTTTTAGGC 57.458 45.000 9.86 9.86 41.45 3.93
242 251 3.189080 GCAATGCAAAAAGGGCTTTTAGG 59.811 43.478 0.00 0.00 41.45 2.69
243 252 3.814283 TGCAATGCAAAAAGGGCTTTTAG 59.186 39.130 5.01 0.00 41.45 1.85
244 253 3.813443 TGCAATGCAAAAAGGGCTTTTA 58.187 36.364 5.01 0.00 41.45 1.52
245 254 2.652590 TGCAATGCAAAAAGGGCTTTT 58.347 38.095 5.01 0.00 43.88 2.27
246 255 2.345124 TGCAATGCAAAAAGGGCTTT 57.655 40.000 5.01 0.00 34.76 3.51
258 267 4.060205 ACAAAAGACCTCAAATGCAATGC 58.940 39.130 0.00 0.00 0.00 3.56
259 268 5.050634 CACACAAAAGACCTCAAATGCAATG 60.051 40.000 0.00 0.00 0.00 2.82
260 269 5.051816 CACACAAAAGACCTCAAATGCAAT 58.948 37.500 0.00 0.00 0.00 3.56
262 271 3.737663 GCACACAAAAGACCTCAAATGCA 60.738 43.478 0.00 0.00 0.00 3.96
263 272 2.796593 GCACACAAAAGACCTCAAATGC 59.203 45.455 0.00 0.00 0.00 3.56
264 273 4.044336 TGCACACAAAAGACCTCAAATG 57.956 40.909 0.00 0.00 0.00 2.32
265 274 4.734398 TTGCACACAAAAGACCTCAAAT 57.266 36.364 0.00 0.00 31.21 2.32
269 278 8.810652 TTATTTAATTGCACACAAAAGACCTC 57.189 30.769 0.00 0.00 39.77 3.85
270 279 9.777297 ATTTATTTAATTGCACACAAAAGACCT 57.223 25.926 0.00 0.00 39.77 3.85
286 295 7.836842 AGAAACACCCTCGCAATTTATTTAAT 58.163 30.769 0.00 0.00 0.00 1.40
296 305 5.553123 TCTTTATAAGAAACACCCTCGCAA 58.447 37.500 0.00 0.00 33.83 4.85
310 319 8.237267 GTGACCCTCACACAAATTCTTTATAAG 58.763 37.037 0.00 0.00 46.22 1.73
311 320 8.106247 GTGACCCTCACACAAATTCTTTATAA 57.894 34.615 0.00 0.00 46.22 0.98
313 322 6.575162 GTGACCCTCACACAAATTCTTTAT 57.425 37.500 0.00 0.00 46.22 1.40
343 352 1.782201 ATGGCTGGGAGTGCACAAGA 61.782 55.000 21.04 0.00 0.00 3.02
359 368 0.896940 AGGCTGGCAGTTGTCAATGG 60.897 55.000 17.16 0.00 0.00 3.16
362 371 0.606401 GCTAGGCTGGCAGTTGTCAA 60.606 55.000 18.73 0.00 0.00 3.18
368 377 4.767255 GCGTGCTAGGCTGGCAGT 62.767 66.667 26.69 0.00 40.54 4.40
403 420 2.005960 CTTCCTCTCGTACCCAGCCG 62.006 65.000 0.00 0.00 0.00 5.52
406 423 0.173708 GTGCTTCCTCTCGTACCCAG 59.826 60.000 0.00 0.00 0.00 4.45
408 425 1.516423 GGTGCTTCCTCTCGTACCC 59.484 63.158 0.00 0.00 30.76 3.69
410 427 1.089920 TACGGTGCTTCCTCTCGTAC 58.910 55.000 0.00 0.00 35.60 3.67
414 431 3.864003 GTGTAAATACGGTGCTTCCTCTC 59.136 47.826 0.00 0.00 0.00 3.20
415 432 3.259876 TGTGTAAATACGGTGCTTCCTCT 59.740 43.478 0.00 0.00 0.00 3.69
433 450 3.890756 TCATCCAACTTGCATTCTTGTGT 59.109 39.130 0.00 0.00 0.00 3.72
436 453 3.256383 TGGTCATCCAACTTGCATTCTTG 59.744 43.478 0.00 0.00 41.25 3.02
437 454 3.499338 TGGTCATCCAACTTGCATTCTT 58.501 40.909 0.00 0.00 41.25 2.52
450 467 9.796120 TTTGAAAATACGAATTTATGGTCATCC 57.204 29.630 0.00 0.00 34.12 3.51
483 504 7.279313 ACTTACGTTTGATGTTCAGTTTAGTGT 59.721 33.333 0.00 0.00 0.00 3.55
487 508 8.428186 AGAACTTACGTTTGATGTTCAGTTTA 57.572 30.769 14.42 0.00 39.33 2.01
546 567 9.797556 GGGTCATATTTTAACCATGACTTTAAC 57.202 33.333 16.76 5.97 45.09 2.01
547 568 9.535170 TGGGTCATATTTTAACCATGACTTTAA 57.465 29.630 16.76 0.00 45.09 1.52
548 569 9.535170 TTGGGTCATATTTTAACCATGACTTTA 57.465 29.630 16.76 6.77 45.09 1.85
549 570 8.429237 TTGGGTCATATTTTAACCATGACTTT 57.571 30.769 16.76 0.00 45.09 2.66
550 571 8.429237 TTTGGGTCATATTTTAACCATGACTT 57.571 30.769 16.76 0.00 45.09 3.01
551 572 8.429237 TTTTGGGTCATATTTTAACCATGACT 57.571 30.769 16.76 0.00 45.09 3.41
554 575 9.541143 GGTATTTTGGGTCATATTTTAACCATG 57.459 33.333 0.00 0.00 34.62 3.66
555 576 8.417884 CGGTATTTTGGGTCATATTTTAACCAT 58.582 33.333 0.00 0.00 34.62 3.55
556 577 7.147880 CCGGTATTTTGGGTCATATTTTAACCA 60.148 37.037 0.00 0.00 34.62 3.67
557 578 7.204604 CCGGTATTTTGGGTCATATTTTAACC 58.795 38.462 0.00 0.00 0.00 2.85
558 579 7.204604 CCCGGTATTTTGGGTCATATTTTAAC 58.795 38.462 0.00 0.00 40.76 2.01
559 580 6.324254 CCCCGGTATTTTGGGTCATATTTTAA 59.676 38.462 0.00 0.00 44.44 1.52
560 581 5.834204 CCCCGGTATTTTGGGTCATATTTTA 59.166 40.000 0.00 0.00 44.44 1.52
561 582 4.651962 CCCCGGTATTTTGGGTCATATTTT 59.348 41.667 0.00 0.00 44.44 1.82
562 583 4.079096 TCCCCGGTATTTTGGGTCATATTT 60.079 41.667 0.00 0.00 44.44 1.40
563 584 3.464080 TCCCCGGTATTTTGGGTCATATT 59.536 43.478 0.00 0.00 44.44 1.28
564 585 3.057586 TCCCCGGTATTTTGGGTCATAT 58.942 45.455 0.00 0.00 44.44 1.78
565 586 2.440253 CTCCCCGGTATTTTGGGTCATA 59.560 50.000 0.00 0.00 44.44 2.15
566 587 1.214424 CTCCCCGGTATTTTGGGTCAT 59.786 52.381 0.00 0.00 44.44 3.06
567 588 0.621609 CTCCCCGGTATTTTGGGTCA 59.378 55.000 0.00 0.00 44.44 4.02
568 589 0.913924 TCTCCCCGGTATTTTGGGTC 59.086 55.000 0.00 0.00 44.44 4.46
569 590 0.622136 GTCTCCCCGGTATTTTGGGT 59.378 55.000 0.00 0.00 44.44 4.51
570 591 0.916809 AGTCTCCCCGGTATTTTGGG 59.083 55.000 0.00 0.00 45.58 4.12
571 592 2.770232 ACTAGTCTCCCCGGTATTTTGG 59.230 50.000 0.00 0.00 0.00 3.28
572 593 5.603170 TTACTAGTCTCCCCGGTATTTTG 57.397 43.478 0.00 0.00 0.00 2.44
573 594 5.394553 CGTTTACTAGTCTCCCCGGTATTTT 60.395 44.000 0.00 0.00 0.00 1.82
574 595 4.098501 CGTTTACTAGTCTCCCCGGTATTT 59.901 45.833 0.00 0.00 0.00 1.40
575 596 3.633986 CGTTTACTAGTCTCCCCGGTATT 59.366 47.826 0.00 0.00 0.00 1.89
576 597 3.217626 CGTTTACTAGTCTCCCCGGTAT 58.782 50.000 0.00 0.00 0.00 2.73
577 598 2.026262 ACGTTTACTAGTCTCCCCGGTA 60.026 50.000 0.00 0.00 0.00 4.02
578 599 1.272147 ACGTTTACTAGTCTCCCCGGT 60.272 52.381 0.00 0.00 0.00 5.28
579 600 1.133790 CACGTTTACTAGTCTCCCCGG 59.866 57.143 0.00 0.00 0.00 5.73
580 601 1.468736 GCACGTTTACTAGTCTCCCCG 60.469 57.143 0.00 0.00 0.00 5.73
581 602 1.134877 GGCACGTTTACTAGTCTCCCC 60.135 57.143 0.00 0.00 0.00 4.81
582 603 1.823610 AGGCACGTTTACTAGTCTCCC 59.176 52.381 0.00 0.00 0.00 4.30
583 604 3.509740 GAAGGCACGTTTACTAGTCTCC 58.490 50.000 0.00 0.00 0.00 3.71
584 605 3.120060 TCGAAGGCACGTTTACTAGTCTC 60.120 47.826 0.00 0.00 34.70 3.36
585 606 2.816087 TCGAAGGCACGTTTACTAGTCT 59.184 45.455 0.00 0.00 34.70 3.24
586 607 3.120060 TCTCGAAGGCACGTTTACTAGTC 60.120 47.826 0.00 0.00 34.70 2.59
587 608 2.816087 TCTCGAAGGCACGTTTACTAGT 59.184 45.455 0.00 0.00 34.70 2.57
588 609 3.482722 TCTCGAAGGCACGTTTACTAG 57.517 47.619 0.00 0.00 34.70 2.57
589 610 3.428452 CCATCTCGAAGGCACGTTTACTA 60.428 47.826 0.00 0.00 34.70 1.82
590 611 2.607187 CATCTCGAAGGCACGTTTACT 58.393 47.619 0.00 0.00 34.70 2.24
591 612 1.659098 CCATCTCGAAGGCACGTTTAC 59.341 52.381 0.00 0.00 34.70 2.01
592 613 1.546923 TCCATCTCGAAGGCACGTTTA 59.453 47.619 0.00 0.00 34.70 2.01
593 614 0.320374 TCCATCTCGAAGGCACGTTT 59.680 50.000 0.00 0.00 34.70 3.60
594 615 0.320374 TTCCATCTCGAAGGCACGTT 59.680 50.000 0.00 0.00 34.70 3.99
595 616 0.389948 GTTCCATCTCGAAGGCACGT 60.390 55.000 4.31 0.00 34.70 4.49
596 617 1.084370 GGTTCCATCTCGAAGGCACG 61.084 60.000 0.00 0.00 0.00 5.34
597 618 0.036388 TGGTTCCATCTCGAAGGCAC 60.036 55.000 0.00 0.00 0.00 5.01
598 619 0.690192 TTGGTTCCATCTCGAAGGCA 59.310 50.000 0.00 0.00 0.00 4.75
599 620 1.066143 TCTTGGTTCCATCTCGAAGGC 60.066 52.381 0.00 0.00 0.00 4.35
600 621 3.055819 TCTTCTTGGTTCCATCTCGAAGG 60.056 47.826 14.42 0.00 0.00 3.46
601 622 4.193826 TCTTCTTGGTTCCATCTCGAAG 57.806 45.455 11.09 11.09 0.00 3.79
602 623 4.617253 TTCTTCTTGGTTCCATCTCGAA 57.383 40.909 0.00 0.00 0.00 3.71
603 624 4.617253 TTTCTTCTTGGTTCCATCTCGA 57.383 40.909 0.00 0.00 0.00 4.04
604 625 4.937620 TGATTTCTTCTTGGTTCCATCTCG 59.062 41.667 0.00 0.00 0.00 4.04
605 626 6.824305 TTGATTTCTTCTTGGTTCCATCTC 57.176 37.500 0.00 0.00 0.00 2.75
606 627 7.452501 TGATTTGATTTCTTCTTGGTTCCATCT 59.547 33.333 0.00 0.00 0.00 2.90
607 628 7.605449 TGATTTGATTTCTTCTTGGTTCCATC 58.395 34.615 0.00 0.00 0.00 3.51
608 629 7.543359 TGATTTGATTTCTTCTTGGTTCCAT 57.457 32.000 0.00 0.00 0.00 3.41
609 630 6.975196 TGATTTGATTTCTTCTTGGTTCCA 57.025 33.333 0.00 0.00 0.00 3.53
610 631 7.096065 CGTTTGATTTGATTTCTTCTTGGTTCC 60.096 37.037 0.00 0.00 0.00 3.62
611 632 7.647715 TCGTTTGATTTGATTTCTTCTTGGTTC 59.352 33.333 0.00 0.00 0.00 3.62
612 633 7.435192 GTCGTTTGATTTGATTTCTTCTTGGTT 59.565 33.333 0.00 0.00 0.00 3.67
613 634 6.918022 GTCGTTTGATTTGATTTCTTCTTGGT 59.082 34.615 0.00 0.00 0.00 3.67
614 635 7.141363 AGTCGTTTGATTTGATTTCTTCTTGG 58.859 34.615 0.00 0.00 0.00 3.61
615 636 9.831737 ATAGTCGTTTGATTTGATTTCTTCTTG 57.168 29.630 0.00 0.00 0.00 3.02
618 639 9.409949 CGTATAGTCGTTTGATTTGATTTCTTC 57.590 33.333 0.00 0.00 0.00 2.87
619 640 7.903431 GCGTATAGTCGTTTGATTTGATTTCTT 59.097 33.333 0.00 0.00 0.00 2.52
620 641 7.064134 TGCGTATAGTCGTTTGATTTGATTTCT 59.936 33.333 0.00 0.00 0.00 2.52
621 642 7.177407 TGCGTATAGTCGTTTGATTTGATTTC 58.823 34.615 0.00 0.00 0.00 2.17
622 643 7.067532 TGCGTATAGTCGTTTGATTTGATTT 57.932 32.000 0.00 0.00 0.00 2.17
623 644 6.656314 TGCGTATAGTCGTTTGATTTGATT 57.344 33.333 0.00 0.00 0.00 2.57
624 645 6.312918 ACTTGCGTATAGTCGTTTGATTTGAT 59.687 34.615 0.00 0.00 0.00 2.57
625 646 5.636121 ACTTGCGTATAGTCGTTTGATTTGA 59.364 36.000 0.00 0.00 0.00 2.69
626 647 5.854157 ACTTGCGTATAGTCGTTTGATTTG 58.146 37.500 0.00 0.00 0.00 2.32
627 648 5.867716 AGACTTGCGTATAGTCGTTTGATTT 59.132 36.000 9.05 0.00 45.22 2.17
628 649 5.408356 AGACTTGCGTATAGTCGTTTGATT 58.592 37.500 9.05 0.00 45.22 2.57
629 650 4.995124 AGACTTGCGTATAGTCGTTTGAT 58.005 39.130 9.05 0.00 45.22 2.57
630 651 4.430137 AGACTTGCGTATAGTCGTTTGA 57.570 40.909 9.05 0.00 45.22 2.69
631 652 4.871222 CAAGACTTGCGTATAGTCGTTTG 58.129 43.478 1.43 6.74 45.22 2.93
646 667 1.607148 GCCGTTAACCAAGCAAGACTT 59.393 47.619 0.00 0.00 40.05 3.01
647 668 1.235724 GCCGTTAACCAAGCAAGACT 58.764 50.000 0.00 0.00 0.00 3.24
648 669 0.240145 GGCCGTTAACCAAGCAAGAC 59.760 55.000 10.89 0.00 0.00 3.01
649 670 0.109723 AGGCCGTTAACCAAGCAAGA 59.890 50.000 0.00 0.00 0.00 3.02
650 671 0.958822 AAGGCCGTTAACCAAGCAAG 59.041 50.000 0.00 0.00 0.00 4.01
651 672 2.273538 TAAGGCCGTTAACCAAGCAA 57.726 45.000 0.00 0.00 0.00 3.91
652 673 1.881324 GTTAAGGCCGTTAACCAAGCA 59.119 47.619 19.22 0.00 43.34 3.91
653 674 2.624316 GTTAAGGCCGTTAACCAAGC 57.376 50.000 19.22 0.71 43.34 4.01
664 685 4.807834 GGTTACAGATCGTTAGTTAAGGCC 59.192 45.833 0.00 0.00 0.00 5.19
677 698 4.117685 GGTTACATCACCGGTTACAGATC 58.882 47.826 2.97 0.00 0.00 2.75
680 701 3.322211 TGGTTACATCACCGGTTACAG 57.678 47.619 2.97 0.00 40.09 2.74
682 703 3.375922 CCATTGGTTACATCACCGGTTAC 59.624 47.826 2.97 0.00 40.09 2.50
740 761 1.298563 CTGTGTGTTGCAGCAACGG 60.299 57.895 28.88 11.15 46.13 4.44
756 777 5.144359 GGTACAAAGATTACACGTTTGCTG 58.856 41.667 0.00 0.00 35.05 4.41
757 778 4.084223 CGGTACAAAGATTACACGTTTGCT 60.084 41.667 0.00 0.00 35.05 3.91
767 788 5.657474 CTTACTGCTCCGGTACAAAGATTA 58.343 41.667 0.00 0.00 0.00 1.75
770 791 2.353406 GCTTACTGCTCCGGTACAAAGA 60.353 50.000 0.00 0.00 38.95 2.52
839 860 3.911868 TGAAACAAAAAGATGATGCCGG 58.088 40.909 0.00 0.00 0.00 6.13
853 874 1.255882 AGGCGCCATGAATGAAACAA 58.744 45.000 31.54 0.00 0.00 2.83
1693 1721 2.223595 CGTAGTGCTCCATGTACCTCTG 60.224 54.545 0.00 0.00 31.32 3.35
1694 1722 2.025155 CGTAGTGCTCCATGTACCTCT 58.975 52.381 0.00 0.00 31.32 3.69
1710 1738 0.679002 TCCCGGTGTCCTTCTCGTAG 60.679 60.000 0.00 0.00 0.00 3.51
1839 1867 2.512515 GTGTCGAGCCATCCCAGC 60.513 66.667 0.00 0.00 0.00 4.85
1843 1871 2.167861 GCTTCGTGTCGAGCCATCC 61.168 63.158 0.00 0.00 37.14 3.51
1845 1873 2.125512 GGCTTCGTGTCGAGCCAT 60.126 61.111 19.28 0.00 43.80 4.40
1913 1941 2.125753 GCTCCGTCACCTGCTCAG 60.126 66.667 0.00 0.00 0.00 3.35
1914 1942 2.601666 AGCTCCGTCACCTGCTCA 60.602 61.111 0.00 0.00 0.00 4.26
2223 2272 2.284405 CCTCCCCACACGTACCCT 60.284 66.667 0.00 0.00 0.00 4.34
2362 2411 1.290134 GAAGAACCTCCCACCTCCAT 58.710 55.000 0.00 0.00 0.00 3.41
2496 2545 1.007336 ACACGACGCGAATTGAGGAC 61.007 55.000 15.93 0.00 0.00 3.85
2518 2567 9.988815 TTGTGCCTTTTGTTTTGTATATATTGT 57.011 25.926 0.00 0.00 0.00 2.71
2561 2616 1.335132 TGTAGGCCCCGCTTAGGAAG 61.335 60.000 0.00 0.00 45.00 3.46
2562 2617 0.693092 ATGTAGGCCCCGCTTAGGAA 60.693 55.000 0.00 0.00 45.00 3.36
2563 2618 1.074775 ATGTAGGCCCCGCTTAGGA 60.075 57.895 0.00 0.00 45.00 2.94
2601 2832 3.233578 CACCGAATGAATTTGAACCACG 58.766 45.455 0.00 0.00 0.00 4.94
2602 2833 4.023193 AGACACCGAATGAATTTGAACCAC 60.023 41.667 0.00 0.00 0.00 4.16
2606 2837 6.227522 TGTAGAGACACCGAATGAATTTGAA 58.772 36.000 0.00 0.00 0.00 2.69
2659 2890 0.918983 TTGGTCCAGCCCTATCCAAG 59.081 55.000 0.00 0.00 33.95 3.61
2730 2961 4.365899 TCATTAAGAAGCGAGCTACGAA 57.634 40.909 9.32 0.00 45.77 3.85
2753 2984 6.459298 CGAGCTAAAATCAATGATTGGCTCTT 60.459 38.462 31.03 18.51 41.61 2.85
3147 3378 1.454722 CTCGTTAAGCTCGTACTCGC 58.545 55.000 0.00 0.00 36.96 5.03
3196 3427 5.949354 CCCATACACCAAACTTCTAATCCAA 59.051 40.000 0.00 0.00 0.00 3.53
3197 3428 5.014755 ACCCATACACCAAACTTCTAATCCA 59.985 40.000 0.00 0.00 0.00 3.41
3198 3429 5.506708 ACCCATACACCAAACTTCTAATCC 58.493 41.667 0.00 0.00 0.00 3.01
3199 3430 7.336396 ACTACCCATACACCAAACTTCTAATC 58.664 38.462 0.00 0.00 0.00 1.75
3200 3431 7.266905 ACTACCCATACACCAAACTTCTAAT 57.733 36.000 0.00 0.00 0.00 1.73
3201 3432 6.691255 ACTACCCATACACCAAACTTCTAA 57.309 37.500 0.00 0.00 0.00 2.10
3202 3433 6.691255 AACTACCCATACACCAAACTTCTA 57.309 37.500 0.00 0.00 0.00 2.10
3203 3434 5.578157 AACTACCCATACACCAAACTTCT 57.422 39.130 0.00 0.00 0.00 2.85
3204 3435 6.644248 AAAACTACCCATACACCAAACTTC 57.356 37.500 0.00 0.00 0.00 3.01
3226 3457 3.399952 TCCAAACACCACCCCTAAAAA 57.600 42.857 0.00 0.00 0.00 1.94
3227 3458 3.621682 ATCCAAACACCACCCCTAAAA 57.378 42.857 0.00 0.00 0.00 1.52
3228 3459 3.010808 CCTATCCAAACACCACCCCTAAA 59.989 47.826 0.00 0.00 0.00 1.85
3229 3460 2.578940 CCTATCCAAACACCACCCCTAA 59.421 50.000 0.00 0.00 0.00 2.69
3230 3461 2.201830 CCTATCCAAACACCACCCCTA 58.798 52.381 0.00 0.00 0.00 3.53
3231 3462 0.999712 CCTATCCAAACACCACCCCT 59.000 55.000 0.00 0.00 0.00 4.79
3232 3463 0.702316 ACCTATCCAAACACCACCCC 59.298 55.000 0.00 0.00 0.00 4.95
3233 3464 2.092592 CCTACCTATCCAAACACCACCC 60.093 54.545 0.00 0.00 0.00 4.61
3234 3465 2.092592 CCCTACCTATCCAAACACCACC 60.093 54.545 0.00 0.00 0.00 4.61
3235 3466 2.841881 TCCCTACCTATCCAAACACCAC 59.158 50.000 0.00 0.00 0.00 4.16
3236 3467 3.208570 TCCCTACCTATCCAAACACCA 57.791 47.619 0.00 0.00 0.00 4.17
3237 3468 4.461198 CATTCCCTACCTATCCAAACACC 58.539 47.826 0.00 0.00 0.00 4.16
3238 3469 3.883489 GCATTCCCTACCTATCCAAACAC 59.117 47.826 0.00 0.00 0.00 3.32
3239 3470 3.525609 TGCATTCCCTACCTATCCAAACA 59.474 43.478 0.00 0.00 0.00 2.83
3240 3471 4.137543 CTGCATTCCCTACCTATCCAAAC 58.862 47.826 0.00 0.00 0.00 2.93
3241 3472 4.044308 TCTGCATTCCCTACCTATCCAAA 58.956 43.478 0.00 0.00 0.00 3.28
3242 3473 3.664320 TCTGCATTCCCTACCTATCCAA 58.336 45.455 0.00 0.00 0.00 3.53
3243 3474 3.344535 TCTGCATTCCCTACCTATCCA 57.655 47.619 0.00 0.00 0.00 3.41
3244 3475 3.555168 CGTTCTGCATTCCCTACCTATCC 60.555 52.174 0.00 0.00 0.00 2.59
3245 3476 3.069729 ACGTTCTGCATTCCCTACCTATC 59.930 47.826 0.00 0.00 0.00 2.08
3246 3477 3.039011 ACGTTCTGCATTCCCTACCTAT 58.961 45.455 0.00 0.00 0.00 2.57
3247 3478 2.167693 CACGTTCTGCATTCCCTACCTA 59.832 50.000 0.00 0.00 0.00 3.08
3248 3479 1.066143 CACGTTCTGCATTCCCTACCT 60.066 52.381 0.00 0.00 0.00 3.08
3249 3480 1.369625 CACGTTCTGCATTCCCTACC 58.630 55.000 0.00 0.00 0.00 3.18
3250 3481 1.066430 TCCACGTTCTGCATTCCCTAC 60.066 52.381 0.00 0.00 0.00 3.18
3251 3482 1.207089 CTCCACGTTCTGCATTCCCTA 59.793 52.381 0.00 0.00 0.00 3.53
3252 3483 0.036010 CTCCACGTTCTGCATTCCCT 60.036 55.000 0.00 0.00 0.00 4.20
3253 3484 1.026718 CCTCCACGTTCTGCATTCCC 61.027 60.000 0.00 0.00 0.00 3.97
3254 3485 1.026718 CCCTCCACGTTCTGCATTCC 61.027 60.000 0.00 0.00 0.00 3.01
3255 3486 1.648467 GCCCTCCACGTTCTGCATTC 61.648 60.000 0.00 0.00 0.00 2.67
3256 3487 1.675641 GCCCTCCACGTTCTGCATT 60.676 57.895 0.00 0.00 0.00 3.56
3257 3488 2.045926 GCCCTCCACGTTCTGCAT 60.046 61.111 0.00 0.00 0.00 3.96
3258 3489 4.329545 GGCCCTCCACGTTCTGCA 62.330 66.667 0.00 0.00 0.00 4.41
3260 3491 3.934391 GACGGCCCTCCACGTTCTG 62.934 68.421 0.00 0.00 44.24 3.02
3261 3492 3.692406 GACGGCCCTCCACGTTCT 61.692 66.667 0.00 0.00 44.24 3.01
3262 3493 3.236003 AAGACGGCCCTCCACGTTC 62.236 63.158 0.00 0.00 44.24 3.95
3263 3494 3.239253 AAGACGGCCCTCCACGTT 61.239 61.111 0.00 0.00 44.24 3.99
3265 3496 4.760047 CCAAGACGGCCCTCCACG 62.760 72.222 0.00 0.00 0.00 4.94
3274 3505 1.153745 CTTCCGAGAGCCAAGACGG 60.154 63.158 0.00 0.00 45.61 4.79
3275 3506 0.809385 TACTTCCGAGAGCCAAGACG 59.191 55.000 0.00 0.00 0.00 4.18
3276 3507 1.819903 AGTACTTCCGAGAGCCAAGAC 59.180 52.381 0.00 0.00 0.00 3.01
3277 3508 2.093106 GAGTACTTCCGAGAGCCAAGA 58.907 52.381 0.00 0.00 0.00 3.02
3278 3509 1.135333 GGAGTACTTCCGAGAGCCAAG 59.865 57.143 0.00 0.00 35.91 3.61
3279 3510 1.183549 GGAGTACTTCCGAGAGCCAA 58.816 55.000 0.00 0.00 35.91 4.52
3280 3511 2.883572 GGAGTACTTCCGAGAGCCA 58.116 57.895 0.00 0.00 35.91 4.75
3288 3519 4.618920 TTGAAACAGAGGGAGTACTTCC 57.381 45.455 12.91 12.91 46.00 3.46
3289 3520 8.095169 TCTATTTTGAAACAGAGGGAGTACTTC 58.905 37.037 0.00 0.00 0.00 3.01
3290 3521 7.974504 TCTATTTTGAAACAGAGGGAGTACTT 58.025 34.615 0.00 0.00 0.00 2.24
3291 3522 7.554959 TCTATTTTGAAACAGAGGGAGTACT 57.445 36.000 0.00 0.00 0.00 2.73
3292 3523 7.201652 GCATCTATTTTGAAACAGAGGGAGTAC 60.202 40.741 0.00 0.00 0.00 2.73
3293 3524 6.823689 GCATCTATTTTGAAACAGAGGGAGTA 59.176 38.462 0.00 0.00 0.00 2.59
3294 3525 5.649831 GCATCTATTTTGAAACAGAGGGAGT 59.350 40.000 0.00 0.00 0.00 3.85
3295 3526 5.067023 GGCATCTATTTTGAAACAGAGGGAG 59.933 44.000 0.00 0.00 0.00 4.30
3296 3527 4.949856 GGCATCTATTTTGAAACAGAGGGA 59.050 41.667 0.00 0.00 0.00 4.20
3297 3528 4.952335 AGGCATCTATTTTGAAACAGAGGG 59.048 41.667 0.00 0.00 0.00 4.30
3298 3529 5.649395 TGAGGCATCTATTTTGAAACAGAGG 59.351 40.000 0.00 0.00 0.00 3.69
3299 3530 6.748333 TGAGGCATCTATTTTGAAACAGAG 57.252 37.500 0.00 0.00 0.00 3.35
3300 3531 6.716628 AGTTGAGGCATCTATTTTGAAACAGA 59.283 34.615 0.00 0.00 0.00 3.41
3301 3532 6.805271 CAGTTGAGGCATCTATTTTGAAACAG 59.195 38.462 0.00 0.00 0.00 3.16
3302 3533 6.680810 CAGTTGAGGCATCTATTTTGAAACA 58.319 36.000 0.00 0.00 0.00 2.83
3303 3534 5.574443 GCAGTTGAGGCATCTATTTTGAAAC 59.426 40.000 0.00 0.00 0.00 2.78
3304 3535 5.243507 TGCAGTTGAGGCATCTATTTTGAAA 59.756 36.000 0.00 0.00 36.11 2.69
3305 3536 4.766373 TGCAGTTGAGGCATCTATTTTGAA 59.234 37.500 0.00 0.00 36.11 2.69
3306 3537 4.334552 TGCAGTTGAGGCATCTATTTTGA 58.665 39.130 0.00 0.00 36.11 2.69
3307 3538 4.707030 TGCAGTTGAGGCATCTATTTTG 57.293 40.909 0.00 0.00 36.11 2.44
3316 3547 1.354031 TCCCTTAATGCAGTTGAGGCA 59.646 47.619 9.91 0.00 46.66 4.75
3317 3548 2.019984 CTCCCTTAATGCAGTTGAGGC 58.980 52.381 9.91 0.00 41.16 4.70
3318 3549 2.239654 TCCTCCCTTAATGCAGTTGAGG 59.760 50.000 12.65 12.65 41.92 3.86
3319 3550 3.634397 TCCTCCCTTAATGCAGTTGAG 57.366 47.619 0.00 0.00 0.00 3.02
3320 3551 4.591321 ATTCCTCCCTTAATGCAGTTGA 57.409 40.909 0.00 0.00 0.00 3.18
3321 3552 4.952335 AGAATTCCTCCCTTAATGCAGTTG 59.048 41.667 0.65 0.00 0.00 3.16
3322 3553 5.198602 AGAATTCCTCCCTTAATGCAGTT 57.801 39.130 0.65 0.00 0.00 3.16
3323 3554 4.870021 AGAATTCCTCCCTTAATGCAGT 57.130 40.909 0.65 0.00 0.00 4.40
3324 3555 4.952335 ACAAGAATTCCTCCCTTAATGCAG 59.048 41.667 0.65 0.00 0.00 4.41
3325 3556 4.934356 ACAAGAATTCCTCCCTTAATGCA 58.066 39.130 0.65 0.00 0.00 3.96
3326 3557 6.038714 CACTACAAGAATTCCTCCCTTAATGC 59.961 42.308 0.65 0.00 0.00 3.56
3327 3558 6.543831 CCACTACAAGAATTCCTCCCTTAATG 59.456 42.308 0.65 0.00 0.00 1.90
3328 3559 6.447084 TCCACTACAAGAATTCCTCCCTTAAT 59.553 38.462 0.65 0.00 0.00 1.40
3329 3560 5.788533 TCCACTACAAGAATTCCTCCCTTAA 59.211 40.000 0.65 0.00 0.00 1.85
3330 3561 5.347124 TCCACTACAAGAATTCCTCCCTTA 58.653 41.667 0.65 0.00 0.00 2.69
3331 3562 4.175962 TCCACTACAAGAATTCCTCCCTT 58.824 43.478 0.65 0.00 0.00 3.95
3332 3563 3.777522 CTCCACTACAAGAATTCCTCCCT 59.222 47.826 0.65 0.00 0.00 4.20
3333 3564 3.118223 CCTCCACTACAAGAATTCCTCCC 60.118 52.174 0.65 0.00 0.00 4.30
3334 3565 3.775316 TCCTCCACTACAAGAATTCCTCC 59.225 47.826 0.65 0.00 0.00 4.30
3335 3566 4.712337 TCTCCTCCACTACAAGAATTCCTC 59.288 45.833 0.65 0.00 0.00 3.71
3336 3567 4.689062 TCTCCTCCACTACAAGAATTCCT 58.311 43.478 0.65 0.00 0.00 3.36
3337 3568 5.422214 TTCTCCTCCACTACAAGAATTCC 57.578 43.478 0.65 0.00 0.00 3.01
3338 3569 6.881602 ACAATTCTCCTCCACTACAAGAATTC 59.118 38.462 0.00 0.00 42.04 2.17
3339 3570 6.656693 CACAATTCTCCTCCACTACAAGAATT 59.343 38.462 0.00 0.00 43.75 2.17
3340 3571 6.013379 TCACAATTCTCCTCCACTACAAGAAT 60.013 38.462 0.00 0.00 38.09 2.40
3341 3572 5.306937 TCACAATTCTCCTCCACTACAAGAA 59.693 40.000 0.00 0.00 0.00 2.52
3342 3573 4.838423 TCACAATTCTCCTCCACTACAAGA 59.162 41.667 0.00 0.00 0.00 3.02
3343 3574 4.932200 GTCACAATTCTCCTCCACTACAAG 59.068 45.833 0.00 0.00 0.00 3.16
3344 3575 4.560716 CGTCACAATTCTCCTCCACTACAA 60.561 45.833 0.00 0.00 0.00 2.41
3345 3576 3.056821 CGTCACAATTCTCCTCCACTACA 60.057 47.826 0.00 0.00 0.00 2.74
3346 3577 3.512680 CGTCACAATTCTCCTCCACTAC 58.487 50.000 0.00 0.00 0.00 2.73
3347 3578 2.094182 GCGTCACAATTCTCCTCCACTA 60.094 50.000 0.00 0.00 0.00 2.74
3348 3579 1.338200 GCGTCACAATTCTCCTCCACT 60.338 52.381 0.00 0.00 0.00 4.00
3349 3580 1.079503 GCGTCACAATTCTCCTCCAC 58.920 55.000 0.00 0.00 0.00 4.02
3350 3581 0.036388 GGCGTCACAATTCTCCTCCA 60.036 55.000 0.00 0.00 0.00 3.86
3351 3582 0.744771 GGGCGTCACAATTCTCCTCC 60.745 60.000 0.00 0.00 0.00 4.30
3352 3583 1.084370 CGGGCGTCACAATTCTCCTC 61.084 60.000 0.00 0.00 0.00 3.71
3353 3584 1.079127 CGGGCGTCACAATTCTCCT 60.079 57.895 0.00 0.00 0.00 3.69
3354 3585 2.106683 CCGGGCGTCACAATTCTCC 61.107 63.158 0.00 0.00 0.00 3.71
3355 3586 0.462047 ATCCGGGCGTCACAATTCTC 60.462 55.000 0.00 0.00 0.00 2.87
3356 3587 0.828022 TATCCGGGCGTCACAATTCT 59.172 50.000 0.00 0.00 0.00 2.40
3357 3588 1.658994 TTATCCGGGCGTCACAATTC 58.341 50.000 0.00 0.00 0.00 2.17
3358 3589 2.341846 ATTATCCGGGCGTCACAATT 57.658 45.000 0.00 0.00 0.00 2.32
3359 3590 2.341846 AATTATCCGGGCGTCACAAT 57.658 45.000 0.00 0.00 0.00 2.71
3360 3591 2.983907 TAATTATCCGGGCGTCACAA 57.016 45.000 0.00 0.00 0.00 3.33
3361 3592 2.828877 CTTAATTATCCGGGCGTCACA 58.171 47.619 0.00 0.00 0.00 3.58
3362 3593 1.529865 GCTTAATTATCCGGGCGTCAC 59.470 52.381 0.00 0.00 0.00 3.67
3363 3594 1.414919 AGCTTAATTATCCGGGCGTCA 59.585 47.619 0.00 0.00 0.00 4.35
3364 3595 2.165319 AGCTTAATTATCCGGGCGTC 57.835 50.000 0.00 0.00 0.00 5.19
3365 3596 2.366266 TGTAGCTTAATTATCCGGGCGT 59.634 45.455 0.00 0.00 0.00 5.68
3366 3597 2.993899 CTGTAGCTTAATTATCCGGGCG 59.006 50.000 0.00 0.00 0.00 6.13
3367 3598 3.746492 CACTGTAGCTTAATTATCCGGGC 59.254 47.826 0.00 0.00 0.00 6.13
3368 3599 5.209818 TCACTGTAGCTTAATTATCCGGG 57.790 43.478 0.00 0.00 0.00 5.73
3369 3600 6.369065 GGAATCACTGTAGCTTAATTATCCGG 59.631 42.308 0.00 0.00 0.00 5.14
3370 3601 6.369065 GGGAATCACTGTAGCTTAATTATCCG 59.631 42.308 0.00 0.00 0.00 4.18
3371 3602 6.655425 GGGGAATCACTGTAGCTTAATTATCC 59.345 42.308 0.00 0.00 0.00 2.59
3372 3603 6.369065 CGGGGAATCACTGTAGCTTAATTATC 59.631 42.308 0.00 0.00 0.00 1.75
3373 3604 6.231211 CGGGGAATCACTGTAGCTTAATTAT 58.769 40.000 0.00 0.00 0.00 1.28
3374 3605 5.607477 CGGGGAATCACTGTAGCTTAATTA 58.393 41.667 0.00 0.00 0.00 1.40
3375 3606 4.451900 CGGGGAATCACTGTAGCTTAATT 58.548 43.478 0.00 0.00 0.00 1.40
3376 3607 3.744530 GCGGGGAATCACTGTAGCTTAAT 60.745 47.826 0.00 0.00 0.00 1.40
3377 3608 2.419574 GCGGGGAATCACTGTAGCTTAA 60.420 50.000 0.00 0.00 0.00 1.85
3378 3609 1.138266 GCGGGGAATCACTGTAGCTTA 59.862 52.381 0.00 0.00 0.00 3.09
3379 3610 0.107654 GCGGGGAATCACTGTAGCTT 60.108 55.000 0.00 0.00 0.00 3.74
3380 3611 0.978146 AGCGGGGAATCACTGTAGCT 60.978 55.000 0.00 0.00 0.00 3.32
3381 3612 0.750850 TAGCGGGGAATCACTGTAGC 59.249 55.000 0.00 0.00 0.00 3.58
3382 3613 3.069586 TCATTAGCGGGGAATCACTGTAG 59.930 47.826 0.00 0.00 0.00 2.74
3383 3614 3.035363 TCATTAGCGGGGAATCACTGTA 58.965 45.455 0.00 0.00 0.00 2.74
3384 3615 1.837439 TCATTAGCGGGGAATCACTGT 59.163 47.619 0.00 0.00 0.00 3.55
3385 3616 2.620251 TCATTAGCGGGGAATCACTG 57.380 50.000 0.00 0.00 0.00 3.66
3386 3617 2.811873 GCATCATTAGCGGGGAATCACT 60.812 50.000 0.00 0.00 0.00 3.41
3387 3618 1.537202 GCATCATTAGCGGGGAATCAC 59.463 52.381 0.00 0.00 0.00 3.06
3388 3619 1.545428 GGCATCATTAGCGGGGAATCA 60.545 52.381 0.00 0.00 0.00 2.57
3389 3620 1.168714 GGCATCATTAGCGGGGAATC 58.831 55.000 0.00 0.00 0.00 2.52
3390 3621 0.478072 TGGCATCATTAGCGGGGAAT 59.522 50.000 0.00 0.00 0.00 3.01
3391 3622 0.465460 GTGGCATCATTAGCGGGGAA 60.465 55.000 0.00 0.00 0.00 3.97
3392 3623 1.148273 GTGGCATCATTAGCGGGGA 59.852 57.895 0.00 0.00 0.00 4.81
3393 3624 2.253758 CGTGGCATCATTAGCGGGG 61.254 63.158 0.00 0.00 0.00 5.73
3394 3625 1.498865 GACGTGGCATCATTAGCGGG 61.499 60.000 0.00 0.00 0.00 6.13
3395 3626 0.809636 TGACGTGGCATCATTAGCGG 60.810 55.000 0.00 0.00 0.00 5.52
3396 3627 0.301687 GTGACGTGGCATCATTAGCG 59.698 55.000 0.00 0.00 0.00 4.26
3397 3628 0.657840 GGTGACGTGGCATCATTAGC 59.342 55.000 0.00 0.00 0.00 3.09
3398 3629 1.665679 GTGGTGACGTGGCATCATTAG 59.334 52.381 0.00 0.00 30.53 1.73
3399 3630 1.732941 GTGGTGACGTGGCATCATTA 58.267 50.000 0.00 0.00 30.53 1.90
3400 3631 1.298157 CGTGGTGACGTGGCATCATT 61.298 55.000 0.00 0.00 40.91 2.57
3401 3632 1.741401 CGTGGTGACGTGGCATCAT 60.741 57.895 0.00 0.00 40.91 2.45
3402 3633 2.356913 CGTGGTGACGTGGCATCA 60.357 61.111 0.00 0.00 40.91 3.07
3403 3634 3.118454 CCGTGGTGACGTGGCATC 61.118 66.667 0.00 0.00 44.54 3.91
3404 3635 2.102109 TAACCGTGGTGACGTGGCAT 62.102 55.000 0.00 0.00 44.54 4.40
3405 3636 2.794028 TAACCGTGGTGACGTGGCA 61.794 57.895 0.00 0.00 44.54 4.92
3406 3637 2.029369 TAACCGTGGTGACGTGGC 59.971 61.111 0.00 0.00 44.54 5.01
3407 3638 0.942410 CAGTAACCGTGGTGACGTGG 60.942 60.000 0.00 0.00 44.54 4.94
3408 3639 0.249155 ACAGTAACCGTGGTGACGTG 60.249 55.000 0.00 3.35 44.54 4.49
3409 3640 0.249155 CACAGTAACCGTGGTGACGT 60.249 55.000 0.77 0.00 44.54 4.34
3410 3641 0.031043 TCACAGTAACCGTGGTGACG 59.969 55.000 0.77 0.00 45.67 4.35
3411 3642 2.450609 ATCACAGTAACCGTGGTGAC 57.549 50.000 0.00 0.00 42.43 3.67
3412 3643 4.039488 AGTTTATCACAGTAACCGTGGTGA 59.961 41.667 0.00 0.00 43.61 4.02
3413 3644 4.312443 AGTTTATCACAGTAACCGTGGTG 58.688 43.478 0.00 0.00 35.03 4.17
3414 3645 4.282703 AGAGTTTATCACAGTAACCGTGGT 59.717 41.667 0.00 0.00 35.03 4.16
3415 3646 4.817517 AGAGTTTATCACAGTAACCGTGG 58.182 43.478 0.00 0.00 35.03 4.94
3416 3647 4.557690 CGAGAGTTTATCACAGTAACCGTG 59.442 45.833 0.00 0.00 35.63 4.94
3417 3648 4.456911 TCGAGAGTTTATCACAGTAACCGT 59.543 41.667 0.00 0.00 0.00 4.83
3418 3649 4.978186 TCGAGAGTTTATCACAGTAACCG 58.022 43.478 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.