Multiple sequence alignment - TraesCS4A01G051900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G051900 chr4A 100.000 8685 0 0 1 8685 42776847 42785531 0.000000e+00 16039.0
1 TraesCS4A01G051900 chr4A 89.706 68 6 1 584 651 660085962 660086028 1.550000e-12 86.1
2 TraesCS4A01G051900 chr4A 80.612 98 16 3 627 723 693279124 693279029 1.210000e-08 73.1
3 TraesCS4A01G051900 chr4B 95.803 5075 156 28 160 5195 518156298 518151242 0.000000e+00 8139.0
4 TraesCS4A01G051900 chr4B 95.717 1681 53 8 6206 7884 518150017 518148354 0.000000e+00 2687.0
5 TraesCS4A01G051900 chr4B 97.093 1032 29 1 5179 6209 518151077 518150046 0.000000e+00 1738.0
6 TraesCS4A01G051900 chr4B 93.590 390 18 3 8297 8685 518148171 518147788 7.560000e-160 575.0
7 TraesCS4A01G051900 chr4B 94.872 156 8 0 1 156 499035417 499035572 2.420000e-60 244.0
8 TraesCS4A01G051900 chr4B 91.195 159 11 3 1 157 587780125 587780282 6.830000e-51 213.0
9 TraesCS4A01G051900 chr4B 91.139 79 7 0 8166 8244 28229339 28229261 3.320000e-19 108.0
10 TraesCS4A01G051900 chr4B 91.250 80 5 2 8166 8244 28229279 28229357 3.320000e-19 108.0
11 TraesCS4A01G051900 chr4D 93.465 2846 119 35 861 3655 421339779 421336950 0.000000e+00 4163.0
12 TraesCS4A01G051900 chr4D 97.444 1682 36 6 6206 7884 421334096 421332419 0.000000e+00 2861.0
13 TraesCS4A01G051900 chr4D 96.250 1440 43 5 3693 5123 421336953 421335516 0.000000e+00 2350.0
14 TraesCS4A01G051900 chr4D 97.335 1088 28 1 5122 6209 421335215 421334129 0.000000e+00 1847.0
15 TraesCS4A01G051900 chr4D 93.530 711 41 4 157 864 421340638 421339930 0.000000e+00 1053.0
16 TraesCS4A01G051900 chr4D 92.308 429 26 3 8260 8685 421332374 421331950 3.470000e-168 603.0
17 TraesCS4A01G051900 chr4D 93.662 142 9 0 8013 8154 93336684 93336825 6.830000e-51 213.0
18 TraesCS4A01G051900 chr4D 89.157 83 8 1 7878 7959 430817014 430817096 1.540000e-17 102.0
19 TraesCS4A01G051900 chr4D 98.113 53 0 1 7963 8014 421332423 421332371 3.340000e-14 91.6
20 TraesCS4A01G051900 chr2A 85.606 396 43 7 7490 7884 666558786 666559168 3.780000e-108 403.0
21 TraesCS4A01G051900 chr2A 96.250 160 6 0 1 160 752728172 752728013 6.690000e-66 263.0
22 TraesCS4A01G051900 chr2A 82.394 142 14 1 8013 8154 558530875 558531005 7.130000e-21 113.0
23 TraesCS4A01G051900 chr2A 91.250 80 7 0 8166 8245 709197863 709197784 9.220000e-20 110.0
24 TraesCS4A01G051900 chr5A 98.101 158 2 1 1 157 452245095 452245252 3.090000e-69 274.0
25 TraesCS4A01G051900 chr5A 100.000 28 0 0 8243 8270 402135423 402135396 1.600000e-02 52.8
26 TraesCS4A01G051900 chr7A 96.226 159 5 1 1 159 207885346 207885503 8.650000e-65 259.0
27 TraesCS4A01G051900 chr7A 94.366 142 8 0 8013 8154 643186890 643187031 1.470000e-52 219.0
28 TraesCS4A01G051900 chr7A 92.500 80 6 0 8166 8245 217551418 217551497 1.980000e-21 115.0
29 TraesCS4A01G051900 chr7A 81.481 81 15 0 767 847 99648548 99648628 5.630000e-07 67.6
30 TraesCS4A01G051900 chr2B 84.980 253 38 0 7446 7698 614906170 614906422 3.110000e-64 257.0
31 TraesCS4A01G051900 chr2B 86.957 92 8 2 7876 7966 798383524 798383436 5.550000e-17 100.0
32 TraesCS4A01G051900 chr3A 93.836 146 9 0 8009 8154 477708162 477708307 4.080000e-53 220.0
33 TraesCS4A01G051900 chr3A 92.466 146 10 1 8009 8154 662422512 662422368 3.180000e-49 207.0
34 TraesCS4A01G051900 chr3A 79.476 229 35 11 498 716 589200208 589200434 1.510000e-32 152.0
35 TraesCS4A01G051900 chr3A 93.750 80 5 0 8166 8245 327830834 327830913 4.260000e-23 121.0
36 TraesCS4A01G051900 chr3A 77.707 157 33 2 568 722 635341134 635340978 2.580000e-15 95.3
37 TraesCS4A01G051900 chr3A 100.000 28 0 0 8243 8270 743565279 743565252 1.600000e-02 52.8
38 TraesCS4A01G051900 chr6D 91.772 158 12 1 8008 8165 41542341 41542497 1.470000e-52 219.0
39 TraesCS4A01G051900 chr6D 88.608 158 16 2 1 157 417351657 417351813 3.200000e-44 191.0
40 TraesCS4A01G051900 chr6D 92.593 81 6 0 8166 8246 452122036 452121956 5.510000e-22 117.0
41 TraesCS4A01G051900 chr6D 90.000 90 7 2 7878 7965 28123618 28123529 1.980000e-21 115.0
42 TraesCS4A01G051900 chr7B 93.662 142 9 0 8013 8154 713291907 713291766 6.830000e-51 213.0
43 TraesCS4A01G051900 chr7B 87.129 101 11 2 8166 8265 481067986 481068085 7.130000e-21 113.0
44 TraesCS4A01G051900 chr7B 86.813 91 6 5 7880 7966 683476324 683476412 7.180000e-16 97.1
45 TraesCS4A01G051900 chr1D 93.662 142 9 0 8013 8154 68439328 68439187 6.830000e-51 213.0
46 TraesCS4A01G051900 chr1D 77.273 264 37 13 483 725 39956719 39956458 5.470000e-27 134.0
47 TraesCS4A01G051900 chr1A 93.662 142 9 0 8013 8154 295312717 295312858 6.830000e-51 213.0
48 TraesCS4A01G051900 chr1A 89.172 157 17 0 1 157 14460178 14460334 6.880000e-46 196.0
49 TraesCS4A01G051900 chr5D 91.503 153 13 0 8002 8154 491000562 491000714 2.460000e-50 211.0
50 TraesCS4A01G051900 chr3D 89.937 159 14 2 4 161 274964803 274964646 4.110000e-48 204.0
51 TraesCS4A01G051900 chr3D 79.581 191 30 8 534 716 447574852 447575041 2.540000e-25 128.0
52 TraesCS4A01G051900 chr3D 97.143 35 1 0 8231 8265 347611616 347611650 9.420000e-05 60.2
53 TraesCS4A01G051900 chr5B 90.385 156 12 2 1 154 583108862 583108708 1.480000e-47 202.0
54 TraesCS4A01G051900 chr5B 83.893 149 19 5 578 722 681214758 681214905 4.230000e-28 137.0
55 TraesCS4A01G051900 chr5B 100.000 29 0 0 8243 8271 591646879 591646851 4.000000e-03 54.7
56 TraesCS4A01G051900 chr3B 81.875 160 23 6 567 722 236510501 236510344 7.080000e-26 130.0
57 TraesCS4A01G051900 chr3B 90.698 86 7 1 7881 7965 736912139 736912224 7.130000e-21 113.0
58 TraesCS4A01G051900 chr3B 91.250 80 6 1 8166 8245 108738563 108738641 3.320000e-19 108.0
59 TraesCS4A01G051900 chr3B 85.567 97 11 3 7881 7976 60836772 60836678 2.000000e-16 99.0
60 TraesCS4A01G051900 chr6A 79.235 183 34 4 541 722 595005468 595005289 3.290000e-24 124.0
61 TraesCS4A01G051900 chr6B 90.698 86 7 1 7881 7965 118184735 118184650 7.130000e-21 113.0
62 TraesCS4A01G051900 chrUn 89.535 86 8 1 7881 7965 81901824 81901909 3.320000e-19 108.0
63 TraesCS4A01G051900 chr2D 91.139 79 7 0 8166 8244 28839777 28839855 3.320000e-19 108.0
64 TraesCS4A01G051900 chr2D 100.000 29 0 0 8235 8263 248199407 248199379 4.000000e-03 54.7
65 TraesCS4A01G051900 chr7D 88.372 86 9 1 7881 7965 584302550 584302465 1.540000e-17 102.0
66 TraesCS4A01G051900 chr1B 96.875 32 1 0 8241 8272 643105758 643105727 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G051900 chr4A 42776847 42785531 8684 False 16039.000000 16039 100.000000 1 8685 1 chr4A.!!$F1 8684
1 TraesCS4A01G051900 chr4B 518147788 518156298 8510 True 3284.750000 8139 95.550750 160 8685 4 chr4B.!!$R2 8525
2 TraesCS4A01G051900 chr4D 421331950 421340638 8688 True 1852.657143 4163 95.492143 157 8685 7 chr4D.!!$R1 8528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
136 137 0.105039 CTCGGCCACCCTAATCTGTC 59.895 60.000 2.24 0.0 0.00 3.51 F
1215 1379 0.179207 CGCTCTACTACGTCAACGCA 60.179 55.000 1.81 0.0 44.43 5.24 F
1404 1589 1.026182 TAATGGCTGGTGCGCTTCAG 61.026 55.000 20.70 20.7 40.82 3.02 F
1864 2053 1.066929 TGCTTGCAGCTAGACATCGAA 60.067 47.619 8.17 0.0 42.97 3.71 F
2910 3119 1.153353 GTTTAGCGGCTTACAGTGCA 58.847 50.000 8.26 0.0 0.00 4.57 F
2928 3137 1.775385 CAAGTTTGGTGTTGGGGAGT 58.225 50.000 0.00 0.0 0.00 3.85 F
4452 4679 1.614903 CATGTGTCATGCTGGGTTTGT 59.385 47.619 0.00 0.0 0.00 2.83 F
4871 5098 1.606224 CCTGATGCAGTTTTTGGCCAC 60.606 52.381 3.88 0.0 0.00 5.01 F
5598 6317 3.763097 TTGCAGTTGTGTCTTTGAGTG 57.237 42.857 0.00 0.0 0.00 3.51 F
6292 7047 0.538287 GCTCCTTGTTTGGTGCTCCT 60.538 55.000 6.34 0.0 41.72 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1444 1629 0.603707 CATCTGCATTCCCGCGGTAT 60.604 55.000 26.12 14.41 39.42 2.73 R
2881 3087 0.392461 GCCGCTAAACCCTGACATGA 60.392 55.000 0.00 0.00 0.00 3.07 R
2910 3119 1.286553 TGACTCCCCAACACCAAACTT 59.713 47.619 0.00 0.00 0.00 2.66 R
2955 3164 2.094494 AGCAACTACATCAGGTGACGAG 60.094 50.000 0.00 0.00 45.69 4.18 R
4452 4679 1.071699 GACCTACCAGTGCCAAGTCAA 59.928 52.381 0.00 0.00 0.00 3.18 R
4871 5098 2.484264 GGTCACCTTTGTCAAGAATCCG 59.516 50.000 0.00 0.00 30.57 4.18 R
5522 6241 1.750018 CCATGCGCACCAATGAGGA 60.750 57.895 14.90 0.00 41.22 3.71 R
5810 6529 2.165845 ACGTTCTTCTGAATAGTCCCCG 59.834 50.000 0.00 0.00 34.40 5.73 R
7097 7853 2.568623 ACTCAAACTAGCCACCCAAG 57.431 50.000 0.00 0.00 0.00 3.61 R
8248 9008 1.343789 GCCTTATACTCCCTCCGTTCC 59.656 57.143 0.00 0.00 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.863809 CTACAATGGCTATCCCCAACC 58.136 52.381 0.00 0.00 38.61 3.77
21 22 1.006813 ACAATGGCTATCCCCAACCA 58.993 50.000 0.00 0.00 38.61 3.67
22 23 1.575304 ACAATGGCTATCCCCAACCAT 59.425 47.619 0.00 0.00 44.78 3.55
23 24 1.965643 CAATGGCTATCCCCAACCATG 59.034 52.381 0.00 0.00 42.06 3.66
24 25 1.234806 ATGGCTATCCCCAACCATGT 58.765 50.000 0.00 0.00 41.34 3.21
25 26 1.006813 TGGCTATCCCCAACCATGTT 58.993 50.000 0.00 0.00 30.32 2.71
26 27 1.360852 TGGCTATCCCCAACCATGTTT 59.639 47.619 0.00 0.00 30.32 2.83
27 28 2.031870 GGCTATCCCCAACCATGTTTC 58.968 52.381 0.00 0.00 0.00 2.78
28 29 2.622977 GGCTATCCCCAACCATGTTTCA 60.623 50.000 0.00 0.00 0.00 2.69
29 30 3.299503 GCTATCCCCAACCATGTTTCAT 58.700 45.455 0.00 0.00 0.00 2.57
30 31 3.319122 GCTATCCCCAACCATGTTTCATC 59.681 47.826 0.00 0.00 0.00 2.92
31 32 2.230130 TCCCCAACCATGTTTCATCC 57.770 50.000 0.00 0.00 0.00 3.51
32 33 1.715931 TCCCCAACCATGTTTCATCCT 59.284 47.619 0.00 0.00 0.00 3.24
33 34 2.111613 TCCCCAACCATGTTTCATCCTT 59.888 45.455 0.00 0.00 0.00 3.36
34 35 2.497273 CCCCAACCATGTTTCATCCTTC 59.503 50.000 0.00 0.00 0.00 3.46
35 36 2.497273 CCCAACCATGTTTCATCCTTCC 59.503 50.000 0.00 0.00 0.00 3.46
36 37 3.164268 CCAACCATGTTTCATCCTTCCA 58.836 45.455 0.00 0.00 0.00 3.53
37 38 3.770933 CCAACCATGTTTCATCCTTCCAT 59.229 43.478 0.00 0.00 0.00 3.41
38 39 4.142093 CCAACCATGTTTCATCCTTCCATC 60.142 45.833 0.00 0.00 0.00 3.51
39 40 3.635591 ACCATGTTTCATCCTTCCATCC 58.364 45.455 0.00 0.00 0.00 3.51
40 41 3.011595 ACCATGTTTCATCCTTCCATCCA 59.988 43.478 0.00 0.00 0.00 3.41
41 42 4.025360 CCATGTTTCATCCTTCCATCCAA 58.975 43.478 0.00 0.00 0.00 3.53
42 43 4.467082 CCATGTTTCATCCTTCCATCCAAA 59.533 41.667 0.00 0.00 0.00 3.28
43 44 5.413499 CATGTTTCATCCTTCCATCCAAAC 58.587 41.667 0.00 0.00 0.00 2.93
44 45 4.478203 TGTTTCATCCTTCCATCCAAACA 58.522 39.130 0.00 0.00 31.55 2.83
45 46 4.898265 TGTTTCATCCTTCCATCCAAACAA 59.102 37.500 0.00 0.00 31.18 2.83
46 47 5.365025 TGTTTCATCCTTCCATCCAAACAAA 59.635 36.000 0.00 0.00 31.18 2.83
47 48 6.126940 TGTTTCATCCTTCCATCCAAACAAAA 60.127 34.615 0.00 0.00 31.18 2.44
48 49 5.467035 TCATCCTTCCATCCAAACAAAAC 57.533 39.130 0.00 0.00 0.00 2.43
49 50 4.898265 TCATCCTTCCATCCAAACAAAACA 59.102 37.500 0.00 0.00 0.00 2.83
50 51 5.543405 TCATCCTTCCATCCAAACAAAACAT 59.457 36.000 0.00 0.00 0.00 2.71
51 52 5.212532 TCCTTCCATCCAAACAAAACATG 57.787 39.130 0.00 0.00 0.00 3.21
52 53 4.040217 TCCTTCCATCCAAACAAAACATGG 59.960 41.667 0.00 0.00 36.15 3.66
53 54 4.317488 CTTCCATCCAAACAAAACATGGG 58.683 43.478 0.00 0.00 35.61 4.00
54 55 3.581101 TCCATCCAAACAAAACATGGGA 58.419 40.909 0.00 0.00 35.61 4.37
55 56 4.166539 TCCATCCAAACAAAACATGGGAT 58.833 39.130 0.00 0.00 35.61 3.85
56 57 5.336945 TCCATCCAAACAAAACATGGGATA 58.663 37.500 0.00 0.00 35.61 2.59
57 58 5.782331 TCCATCCAAACAAAACATGGGATAA 59.218 36.000 0.00 0.00 35.61 1.75
58 59 5.874261 CCATCCAAACAAAACATGGGATAAC 59.126 40.000 0.00 0.00 33.57 1.89
59 60 5.476091 TCCAAACAAAACATGGGATAACC 57.524 39.130 0.00 0.00 40.81 2.85
60 61 5.151454 TCCAAACAAAACATGGGATAACCT 58.849 37.500 0.00 0.00 41.11 3.50
61 62 5.245075 TCCAAACAAAACATGGGATAACCTC 59.755 40.000 0.00 0.00 41.11 3.85
62 63 5.011533 CCAAACAAAACATGGGATAACCTCA 59.988 40.000 0.00 0.00 41.11 3.86
63 64 5.722021 AACAAAACATGGGATAACCTCAC 57.278 39.130 0.00 0.00 41.11 3.51
64 65 4.086457 ACAAAACATGGGATAACCTCACC 58.914 43.478 0.00 0.00 41.11 4.02
65 66 3.382083 AAACATGGGATAACCTCACCC 57.618 47.619 0.00 0.00 43.51 4.61
66 67 2.286935 ACATGGGATAACCTCACCCT 57.713 50.000 0.00 0.00 43.59 4.34
67 68 2.573463 ACATGGGATAACCTCACCCTT 58.427 47.619 0.00 0.00 43.59 3.95
68 69 2.509964 ACATGGGATAACCTCACCCTTC 59.490 50.000 0.00 0.00 43.59 3.46
69 70 1.591768 TGGGATAACCTCACCCTTCC 58.408 55.000 0.00 0.00 43.59 3.46
70 71 1.203505 TGGGATAACCTCACCCTTCCA 60.204 52.381 0.00 0.00 43.59 3.53
71 72 1.920351 GGGATAACCTCACCCTTCCAA 59.080 52.381 0.00 0.00 40.39 3.53
72 73 2.356844 GGGATAACCTCACCCTTCCAAC 60.357 54.545 0.00 0.00 40.39 3.77
73 74 2.356844 GGATAACCTCACCCTTCCAACC 60.357 54.545 0.00 0.00 0.00 3.77
74 75 1.822425 TAACCTCACCCTTCCAACCA 58.178 50.000 0.00 0.00 0.00 3.67
75 76 0.930726 AACCTCACCCTTCCAACCAA 59.069 50.000 0.00 0.00 0.00 3.67
76 77 0.930726 ACCTCACCCTTCCAACCAAA 59.069 50.000 0.00 0.00 0.00 3.28
77 78 1.328279 CCTCACCCTTCCAACCAAAC 58.672 55.000 0.00 0.00 0.00 2.93
78 79 1.410932 CCTCACCCTTCCAACCAAACA 60.411 52.381 0.00 0.00 0.00 2.83
79 80 1.956477 CTCACCCTTCCAACCAAACAG 59.044 52.381 0.00 0.00 0.00 3.16
80 81 1.566703 TCACCCTTCCAACCAAACAGA 59.433 47.619 0.00 0.00 0.00 3.41
81 82 2.024846 TCACCCTTCCAACCAAACAGAA 60.025 45.455 0.00 0.00 0.00 3.02
82 83 2.763448 CACCCTTCCAACCAAACAGAAA 59.237 45.455 0.00 0.00 0.00 2.52
83 84 3.196685 CACCCTTCCAACCAAACAGAAAA 59.803 43.478 0.00 0.00 0.00 2.29
84 85 3.841255 ACCCTTCCAACCAAACAGAAAAA 59.159 39.130 0.00 0.00 0.00 1.94
85 86 4.081142 ACCCTTCCAACCAAACAGAAAAAG 60.081 41.667 0.00 0.00 0.00 2.27
86 87 4.441792 CCTTCCAACCAAACAGAAAAAGG 58.558 43.478 0.00 0.00 0.00 3.11
87 88 4.441792 CTTCCAACCAAACAGAAAAAGGG 58.558 43.478 0.00 0.00 0.00 3.95
88 89 2.169561 TCCAACCAAACAGAAAAAGGGC 59.830 45.455 0.00 0.00 0.00 5.19
89 90 2.170397 CCAACCAAACAGAAAAAGGGCT 59.830 45.455 0.00 0.00 0.00 5.19
90 91 3.386402 CCAACCAAACAGAAAAAGGGCTA 59.614 43.478 0.00 0.00 0.00 3.93
91 92 4.040339 CCAACCAAACAGAAAAAGGGCTAT 59.960 41.667 0.00 0.00 0.00 2.97
92 93 5.230182 CAACCAAACAGAAAAAGGGCTATC 58.770 41.667 0.00 0.00 0.00 2.08
93 94 3.832490 ACCAAACAGAAAAAGGGCTATCC 59.168 43.478 0.00 0.00 0.00 2.59
105 106 1.676384 GCTATCCCTAGCCAGCTGG 59.324 63.158 29.34 29.34 43.90 4.85
106 107 1.124477 GCTATCCCTAGCCAGCTGGT 61.124 60.000 32.81 21.44 43.90 4.00
107 108 1.428869 CTATCCCTAGCCAGCTGGTT 58.571 55.000 32.81 29.58 37.57 3.67
108 109 1.071385 CTATCCCTAGCCAGCTGGTTG 59.929 57.143 32.81 21.58 37.57 3.77
109 110 1.639635 ATCCCTAGCCAGCTGGTTGG 61.640 60.000 32.81 28.10 41.35 3.77
110 111 2.273449 CCTAGCCAGCTGGTTGGG 59.727 66.667 32.36 32.36 40.33 4.12
111 112 2.273449 CTAGCCAGCTGGTTGGGG 59.727 66.667 32.81 17.56 38.72 4.96
112 113 2.204074 TAGCCAGCTGGTTGGGGA 60.204 61.111 32.81 10.29 38.72 4.81
113 114 1.619363 TAGCCAGCTGGTTGGGGAT 60.619 57.895 32.81 8.14 38.72 3.85
114 115 1.925285 TAGCCAGCTGGTTGGGGATG 61.925 60.000 32.81 5.52 38.72 3.51
115 116 2.757099 CCAGCTGGTTGGGGATGC 60.757 66.667 25.53 0.00 34.46 3.91
116 117 2.757099 CAGCTGGTTGGGGATGCC 60.757 66.667 5.57 0.00 0.00 4.40
117 118 4.066139 AGCTGGTTGGGGATGCCC 62.066 66.667 16.99 16.99 44.51 5.36
118 119 4.066139 GCTGGTTGGGGATGCCCT 62.066 66.667 24.41 0.00 44.66 5.19
119 120 2.276740 CTGGTTGGGGATGCCCTC 59.723 66.667 24.41 15.73 44.66 4.30
120 121 3.704231 CTGGTTGGGGATGCCCTCG 62.704 68.421 24.41 3.29 44.66 4.63
121 122 4.506255 GGTTGGGGATGCCCTCGG 62.506 72.222 24.41 0.00 44.66 4.63
131 132 3.489513 GCCCTCGGCCACCCTAAT 61.490 66.667 2.24 0.00 44.06 1.73
132 133 2.829592 CCCTCGGCCACCCTAATC 59.170 66.667 2.24 0.00 0.00 1.75
133 134 1.766461 CCCTCGGCCACCCTAATCT 60.766 63.158 2.24 0.00 0.00 2.40
134 135 1.447643 CCTCGGCCACCCTAATCTG 59.552 63.158 2.24 0.00 0.00 2.90
135 136 1.338136 CCTCGGCCACCCTAATCTGT 61.338 60.000 2.24 0.00 0.00 3.41
136 137 0.105039 CTCGGCCACCCTAATCTGTC 59.895 60.000 2.24 0.00 0.00 3.51
137 138 1.146263 CGGCCACCCTAATCTGTCC 59.854 63.158 2.24 0.00 0.00 4.02
138 139 1.532238 GGCCACCCTAATCTGTCCC 59.468 63.158 0.00 0.00 0.00 4.46
139 140 0.988678 GGCCACCCTAATCTGTCCCT 60.989 60.000 0.00 0.00 0.00 4.20
140 141 0.470341 GCCACCCTAATCTGTCCCTC 59.530 60.000 0.00 0.00 0.00 4.30
141 142 1.879575 CCACCCTAATCTGTCCCTCA 58.120 55.000 0.00 0.00 0.00 3.86
142 143 2.196595 CCACCCTAATCTGTCCCTCAA 58.803 52.381 0.00 0.00 0.00 3.02
143 144 2.576191 CCACCCTAATCTGTCCCTCAAA 59.424 50.000 0.00 0.00 0.00 2.69
144 145 3.610911 CACCCTAATCTGTCCCTCAAAC 58.389 50.000 0.00 0.00 0.00 2.93
145 146 2.576648 ACCCTAATCTGTCCCTCAAACC 59.423 50.000 0.00 0.00 0.00 3.27
146 147 2.576191 CCCTAATCTGTCCCTCAAACCA 59.424 50.000 0.00 0.00 0.00 3.67
147 148 3.010138 CCCTAATCTGTCCCTCAAACCAA 59.990 47.826 0.00 0.00 0.00 3.67
148 149 4.508405 CCCTAATCTGTCCCTCAAACCAAA 60.508 45.833 0.00 0.00 0.00 3.28
149 150 4.459337 CCTAATCTGTCCCTCAAACCAAAC 59.541 45.833 0.00 0.00 0.00 2.93
150 151 3.593442 ATCTGTCCCTCAAACCAAACA 57.407 42.857 0.00 0.00 0.00 2.83
151 152 2.650322 TCTGTCCCTCAAACCAAACAC 58.350 47.619 0.00 0.00 0.00 3.32
152 153 2.025793 TCTGTCCCTCAAACCAAACACA 60.026 45.455 0.00 0.00 0.00 3.72
153 154 2.958355 CTGTCCCTCAAACCAAACACAT 59.042 45.455 0.00 0.00 0.00 3.21
154 155 2.955660 TGTCCCTCAAACCAAACACATC 59.044 45.455 0.00 0.00 0.00 3.06
155 156 2.296190 GTCCCTCAAACCAAACACATCC 59.704 50.000 0.00 0.00 0.00 3.51
259 260 5.679734 AGCTGCATTTATACAAATCGAGG 57.320 39.130 1.02 0.00 31.82 4.63
471 472 9.101655 CAAAGAGTTTTTGTGGATGATTCTTTT 57.898 29.630 0.00 0.00 31.97 2.27
472 473 9.671279 AAAGAGTTTTTGTGGATGATTCTTTTT 57.329 25.926 0.00 0.00 30.61 1.94
576 578 8.874816 GTCTACAGAAAATCCACAAAGATCTAC 58.125 37.037 0.00 0.00 0.00 2.59
577 579 8.593679 TCTACAGAAAATCCACAAAGATCTACA 58.406 33.333 0.00 0.00 0.00 2.74
713 719 9.341899 CCTAGAACTTCAATTATTTTGAAACGG 57.658 33.333 0.00 0.00 37.89 4.44
729 735 4.936411 TGAAACGGAGAGAGTAGAGTGTAG 59.064 45.833 0.00 0.00 0.00 2.74
734 740 6.181908 ACGGAGAGAGTAGAGTGTAGAAAAT 58.818 40.000 0.00 0.00 0.00 1.82
735 741 6.094325 ACGGAGAGAGTAGAGTGTAGAAAATG 59.906 42.308 0.00 0.00 0.00 2.32
736 742 6.094325 CGGAGAGAGTAGAGTGTAGAAAATGT 59.906 42.308 0.00 0.00 0.00 2.71
737 743 7.280428 CGGAGAGAGTAGAGTGTAGAAAATGTA 59.720 40.741 0.00 0.00 0.00 2.29
739 745 9.997482 GAGAGAGTAGAGTGTAGAAAATGTAAG 57.003 37.037 0.00 0.00 0.00 2.34
740 746 9.742144 AGAGAGTAGAGTGTAGAAAATGTAAGA 57.258 33.333 0.00 0.00 0.00 2.10
824 833 7.003402 TCCAAATCCTTTAAAAATCCTGTGG 57.997 36.000 0.00 0.00 0.00 4.17
1215 1379 0.179207 CGCTCTACTACGTCAACGCA 60.179 55.000 1.81 0.00 44.43 5.24
1305 1469 5.176958 CCTTCACACTACTTTTACAAGTCCG 59.823 44.000 0.00 0.00 42.66 4.79
1404 1589 1.026182 TAATGGCTGGTGCGCTTCAG 61.026 55.000 20.70 20.70 40.82 3.02
1490 1675 6.146184 ACAGACTTCGATATCTTTGTGTGTTG 59.854 38.462 12.41 4.63 29.74 3.33
1555 1740 1.279496 TGAGCTACTGGGAGCATTGT 58.721 50.000 7.60 0.00 45.43 2.71
1579 1764 1.301677 CTTTTGCTGCCCGACTCCTC 61.302 60.000 0.00 0.00 0.00 3.71
1864 2053 1.066929 TGCTTGCAGCTAGACATCGAA 60.067 47.619 8.17 0.00 42.97 3.71
2378 2572 8.366671 AGTCGTTATCCTCTATAATGTTTTGC 57.633 34.615 0.00 0.00 37.99 3.68
2423 2617 3.124636 AGTTACTGCTAAAAATCGCGGTG 59.875 43.478 6.13 0.00 44.80 4.94
2701 2898 6.422100 CCTGTCAAATGGTCACTTAGATATCG 59.578 42.308 0.00 0.00 0.00 2.92
2801 3007 6.231211 AGGCTGCTGTGTATATATGGTAAAC 58.769 40.000 0.00 0.00 0.00 2.01
2846 3052 3.914426 AGAGTGTCTTCAAACCACAGT 57.086 42.857 0.00 0.00 0.00 3.55
2910 3119 1.153353 GTTTAGCGGCTTACAGTGCA 58.847 50.000 8.26 0.00 0.00 4.57
2928 3137 1.775385 CAAGTTTGGTGTTGGGGAGT 58.225 50.000 0.00 0.00 0.00 3.85
3206 3416 4.404394 TCTTCTCACAGTAACACACCTTGA 59.596 41.667 0.00 0.00 0.00 3.02
3383 3593 3.364549 TCATGGTTTTAGGATGCCCTTG 58.635 45.455 0.00 0.00 40.78 3.61
3439 3649 3.268023 AGGTCGAAGGCTGGATTAAAG 57.732 47.619 0.00 0.00 0.00 1.85
3554 3764 7.817418 TTGATGCCTTATTAGGGTATGTTTC 57.183 36.000 0.06 0.00 42.25 2.78
3555 3765 6.905736 TGATGCCTTATTAGGGTATGTTTCA 58.094 36.000 0.06 0.00 42.25 2.69
3556 3766 7.526041 TGATGCCTTATTAGGGTATGTTTCAT 58.474 34.615 0.06 0.00 42.25 2.57
3577 3795 2.246469 TCCTGCTGCTTGGCATTTTAA 58.754 42.857 0.00 0.00 41.63 1.52
3591 3809 6.934056 TGGCATTTTAATAAGCATGAACAGT 58.066 32.000 0.00 0.00 0.00 3.55
3596 3814 6.926280 TTTAATAAGCATGAACAGTTTGCG 57.074 33.333 0.00 0.00 41.22 4.85
3827 4045 4.511527 CAGTCTCTTAGTCCATGCATGTT 58.488 43.478 24.58 12.49 0.00 2.71
3831 4049 8.093307 CAGTCTCTTAGTCCATGCATGTTATAT 58.907 37.037 24.58 8.81 0.00 0.86
3835 4053 9.881649 CTCTTAGTCCATGCATGTTATATATGT 57.118 33.333 24.58 2.31 0.00 2.29
3960 4183 8.774586 GTTTGTCTCTTTAGTTATCTTTCAGCA 58.225 33.333 0.00 0.00 0.00 4.41
4024 4247 2.757099 GGGGTTGGCCTGCATCTG 60.757 66.667 3.32 0.00 34.45 2.90
4083 4306 5.721876 TTTTTGCAGCTTCTTCAAACATG 57.278 34.783 0.00 0.00 30.45 3.21
4084 4307 4.389890 TTTGCAGCTTCTTCAAACATGT 57.610 36.364 0.00 0.00 0.00 3.21
4368 4595 9.487790 CAGTTCTCAAGATTAGATCCTATTTCC 57.512 37.037 0.00 0.00 0.00 3.13
4452 4679 1.614903 CATGTGTCATGCTGGGTTTGT 59.385 47.619 0.00 0.00 0.00 2.83
4555 4782 9.507329 TGACAGCTAAGAAATAGAAAGAACAAT 57.493 29.630 0.00 0.00 33.04 2.71
4871 5098 1.606224 CCTGATGCAGTTTTTGGCCAC 60.606 52.381 3.88 0.00 0.00 5.01
4931 5158 5.163663 TGTTCTTGTTTCCACATCAACTGAC 60.164 40.000 0.00 0.00 31.06 3.51
4934 5161 3.884895 TGTTTCCACATCAACTGACAGT 58.115 40.909 1.07 1.07 0.00 3.55
4995 5222 6.701400 TGTCTATGTGACCATCGTATTTGATG 59.299 38.462 0.00 0.00 44.75 3.07
5084 5311 6.999272 TCCACTCAGTATCATCTCTACCTTAC 59.001 42.308 0.00 0.00 0.00 2.34
5336 6055 7.061634 GTGTGTACGTCAAATTGTAAGAACTC 58.938 38.462 0.00 0.00 0.00 3.01
5598 6317 3.763097 TTGCAGTTGTGTCTTTGAGTG 57.237 42.857 0.00 0.00 0.00 3.51
5607 6326 7.588854 CAGTTGTGTCTTTGAGTGACAAATATG 59.411 37.037 0.00 0.00 45.63 1.78
5810 6529 4.438744 CGGGAAGTAGAATTTGGCAATGAC 60.439 45.833 0.00 0.00 0.00 3.06
5878 6597 8.367156 ACATCTTGCTAACACAATTGGTATTTT 58.633 29.630 10.83 0.00 0.00 1.82
5901 6620 7.938563 TTTGCGTGCTAAAACTTTTATTCAT 57.061 28.000 0.00 0.00 0.00 2.57
5939 6658 7.625828 ATGCTTTAGTTGGTATTAACTGTCC 57.374 36.000 0.00 0.00 40.85 4.02
6115 6834 2.858745 TGGTAAGTTGGTCTCTTTGGC 58.141 47.619 0.00 0.00 0.00 4.52
6292 7047 0.538287 GCTCCTTGTTTGGTGCTCCT 60.538 55.000 6.34 0.00 41.72 3.69
6313 7068 4.976116 CCTTTTAAGTTCTGTTTCTTGGCG 59.024 41.667 0.00 0.00 0.00 5.69
6335 7090 5.062308 GCGTACAGAAAGTAAAGACATCCAG 59.938 44.000 0.00 0.00 33.72 3.86
6495 7251 8.187913 TGAATTGGTTCCACTTGATATTTCAA 57.812 30.769 0.00 0.00 35.71 2.69
6506 7262 7.359431 CCACTTGATATTTCAAACACATGTTGC 60.359 37.037 0.00 0.00 41.22 4.17
6520 7276 6.108015 ACACATGTTGCATTTGGATATTTCC 58.892 36.000 0.00 0.00 42.94 3.13
6623 7379 9.905713 ATCTGTTGGTGTTACAGTGATATAAAT 57.094 29.630 0.00 0.00 42.77 1.40
6775 7531 2.045045 CAAGGGGGCGAGATTGCA 60.045 61.111 0.00 0.00 36.28 4.08
6887 7643 6.541641 ACTTGCCAAAATTTAATGCTGACAAA 59.458 30.769 0.00 0.00 0.00 2.83
6952 7708 7.442656 TGTAAAAGAAACCCACTTTCAAACAA 58.557 30.769 0.00 0.00 40.88 2.83
6985 7741 9.688592 ACTCTTTGAGCTTCAAAATTCTTTATG 57.311 29.630 10.97 0.44 44.69 1.90
7063 7819 8.454106 GGCTGTAATAATGAAACTATAGCATGG 58.546 37.037 0.00 0.00 0.00 3.66
7097 7853 8.456471 TGTTCTGATGAATTGTTGAGATGATTC 58.544 33.333 0.00 0.00 34.40 2.52
7114 7870 3.073798 TGATTCTTGGGTGGCTAGTTTGA 59.926 43.478 0.00 0.00 0.00 2.69
7315 8072 4.386049 CACAGAAGACCAGTTTCGTACATC 59.614 45.833 0.00 0.00 0.00 3.06
7585 8343 0.667184 AGCCGAAGCCAATTTTTGCG 60.667 50.000 0.00 0.00 41.25 4.85
7601 8359 7.701809 ATTTTTGCGAAAATAGAAACCGAAA 57.298 28.000 20.85 0.00 42.21 3.46
7767 8525 3.057736 CCTGTTCTGCAAAACCATCTCAG 60.058 47.826 0.00 0.00 0.00 3.35
7862 8620 5.012561 ACTTAGCAATTCTGTTCTCTCAGGT 59.987 40.000 0.00 0.00 36.25 4.00
7870 8628 6.436843 TTCTGTTCTCTCAGGTTTTGAAAC 57.563 37.500 0.00 0.00 34.81 2.78
7887 8645 7.654022 TTTGAAACTCAAAATTGTACTCCCT 57.346 32.000 0.00 0.00 42.72 4.20
7888 8646 8.754991 TTTGAAACTCAAAATTGTACTCCCTA 57.245 30.769 0.00 0.00 42.72 3.53
7889 8647 7.739498 TGAAACTCAAAATTGTACTCCCTAC 57.261 36.000 0.00 0.00 0.00 3.18
7890 8648 6.425721 TGAAACTCAAAATTGTACTCCCTACG 59.574 38.462 0.00 0.00 0.00 3.51
7891 8649 5.479124 ACTCAAAATTGTACTCCCTACGT 57.521 39.130 0.00 0.00 0.00 3.57
7892 8650 5.861727 ACTCAAAATTGTACTCCCTACGTT 58.138 37.500 0.00 0.00 0.00 3.99
7893 8651 5.930569 ACTCAAAATTGTACTCCCTACGTTC 59.069 40.000 0.00 0.00 0.00 3.95
7894 8652 5.240121 TCAAAATTGTACTCCCTACGTTCC 58.760 41.667 0.00 0.00 0.00 3.62
7895 8653 4.895668 AAATTGTACTCCCTACGTTCCA 57.104 40.909 0.00 0.00 0.00 3.53
7896 8654 4.895668 AATTGTACTCCCTACGTTCCAA 57.104 40.909 0.00 0.00 0.00 3.53
7897 8655 4.895668 ATTGTACTCCCTACGTTCCAAA 57.104 40.909 0.00 0.00 0.00 3.28
7898 8656 4.686191 TTGTACTCCCTACGTTCCAAAA 57.314 40.909 0.00 0.00 0.00 2.44
7899 8657 4.895668 TGTACTCCCTACGTTCCAAAAT 57.104 40.909 0.00 0.00 0.00 1.82
7900 8658 5.999205 TGTACTCCCTACGTTCCAAAATA 57.001 39.130 0.00 0.00 0.00 1.40
7901 8659 5.969423 TGTACTCCCTACGTTCCAAAATAG 58.031 41.667 0.00 0.00 0.00 1.73
7902 8660 5.716228 TGTACTCCCTACGTTCCAAAATAGA 59.284 40.000 0.00 0.00 0.00 1.98
7903 8661 5.952347 ACTCCCTACGTTCCAAAATAGAT 57.048 39.130 0.00 0.00 0.00 1.98
7904 8662 7.560991 TGTACTCCCTACGTTCCAAAATAGATA 59.439 37.037 0.00 0.00 0.00 1.98
7905 8663 7.427989 ACTCCCTACGTTCCAAAATAGATAA 57.572 36.000 0.00 0.00 0.00 1.75
7906 8664 7.270779 ACTCCCTACGTTCCAAAATAGATAAC 58.729 38.462 0.00 0.00 0.00 1.89
7907 8665 6.585416 TCCCTACGTTCCAAAATAGATAACC 58.415 40.000 0.00 0.00 0.00 2.85
7908 8666 5.761726 CCCTACGTTCCAAAATAGATAACCC 59.238 44.000 0.00 0.00 0.00 4.11
7909 8667 6.350906 CCTACGTTCCAAAATAGATAACCCA 58.649 40.000 0.00 0.00 0.00 4.51
7910 8668 6.824704 CCTACGTTCCAAAATAGATAACCCAA 59.175 38.462 0.00 0.00 0.00 4.12
7911 8669 6.505044 ACGTTCCAAAATAGATAACCCAAC 57.495 37.500 0.00 0.00 0.00 3.77
7912 8670 6.243148 ACGTTCCAAAATAGATAACCCAACT 58.757 36.000 0.00 0.00 0.00 3.16
7913 8671 6.717997 ACGTTCCAAAATAGATAACCCAACTT 59.282 34.615 0.00 0.00 0.00 2.66
7914 8672 7.231925 ACGTTCCAAAATAGATAACCCAACTTT 59.768 33.333 0.00 0.00 0.00 2.66
7915 8673 7.540745 CGTTCCAAAATAGATAACCCAACTTTG 59.459 37.037 0.00 0.00 0.00 2.77
7916 8674 8.364894 GTTCCAAAATAGATAACCCAACTTTGT 58.635 33.333 0.00 0.00 0.00 2.83
7917 8675 9.589461 TTCCAAAATAGATAACCCAACTTTGTA 57.411 29.630 0.00 0.00 0.00 2.41
7918 8676 9.762381 TCCAAAATAGATAACCCAACTTTGTAT 57.238 29.630 0.00 0.00 0.00 2.29
7956 8714 9.893305 AAAGTTAAGTCATCTATTTTGAAACGG 57.107 29.630 0.00 0.00 0.00 4.44
7957 8715 8.842358 AGTTAAGTCATCTATTTTGAAACGGA 57.158 30.769 0.00 0.00 0.00 4.69
7958 8716 8.936864 AGTTAAGTCATCTATTTTGAAACGGAG 58.063 33.333 0.00 0.00 0.00 4.63
7959 8717 5.803020 AGTCATCTATTTTGAAACGGAGC 57.197 39.130 0.00 0.00 0.00 4.70
7960 8718 4.330074 AGTCATCTATTTTGAAACGGAGCG 59.670 41.667 0.00 0.00 0.00 5.03
7961 8719 4.328983 GTCATCTATTTTGAAACGGAGCGA 59.671 41.667 0.00 0.00 0.00 4.93
8024 8784 4.529377 TGAAAATGTAGTACTCCCTCCGTT 59.471 41.667 0.00 0.00 0.00 4.44
8025 8785 4.732672 AAATGTAGTACTCCCTCCGTTC 57.267 45.455 0.00 0.00 0.00 3.95
8026 8786 3.666345 ATGTAGTACTCCCTCCGTTCT 57.334 47.619 0.00 0.00 0.00 3.01
8028 8788 2.306805 TGTAGTACTCCCTCCGTTCTCA 59.693 50.000 0.00 0.00 0.00 3.27
8033 8793 4.645588 AGTACTCCCTCCGTTCTCAAATAG 59.354 45.833 0.00 0.00 0.00 1.73
8037 8797 4.094476 TCCCTCCGTTCTCAAATAGAAGT 58.906 43.478 0.00 0.00 44.94 3.01
8038 8798 4.159879 TCCCTCCGTTCTCAAATAGAAGTC 59.840 45.833 0.00 0.00 44.94 3.01
8039 8799 4.160626 CCCTCCGTTCTCAAATAGAAGTCT 59.839 45.833 0.00 0.00 44.94 3.24
8044 8804 7.861630 TCCGTTCTCAAATAGAAGTCTTTTTG 58.138 34.615 14.50 14.50 44.94 2.44
8046 8806 7.255139 CCGTTCTCAAATAGAAGTCTTTTTGGT 60.255 37.037 18.26 0.00 44.94 3.67
8047 8807 7.587757 CGTTCTCAAATAGAAGTCTTTTTGGTG 59.412 37.037 18.26 13.50 44.94 4.17
8048 8808 8.621286 GTTCTCAAATAGAAGTCTTTTTGGTGA 58.379 33.333 18.26 14.87 44.94 4.02
8049 8809 8.924511 TCTCAAATAGAAGTCTTTTTGGTGAT 57.075 30.769 18.26 0.00 41.80 3.06
8050 8810 9.354673 TCTCAAATAGAAGTCTTTTTGGTGATT 57.645 29.630 18.26 0.00 41.80 2.57
8051 8811 9.617975 CTCAAATAGAAGTCTTTTTGGTGATTC 57.382 33.333 18.26 0.00 41.80 2.52
8052 8812 8.576442 TCAAATAGAAGTCTTTTTGGTGATTCC 58.424 33.333 18.26 0.00 41.80 3.01
8065 8825 5.957842 TGGTGATTCCAACAAATGACTAC 57.042 39.130 0.00 0.00 44.12 2.73
8067 8827 6.009589 TGGTGATTCCAACAAATGACTACAT 58.990 36.000 0.00 0.00 44.12 2.29
8068 8828 7.171653 TGGTGATTCCAACAAATGACTACATA 58.828 34.615 0.00 0.00 44.12 2.29
8069 8829 7.120579 TGGTGATTCCAACAAATGACTACATAC 59.879 37.037 0.00 0.00 44.12 2.39
8070 8830 7.120579 GGTGATTCCAACAAATGACTACATACA 59.879 37.037 0.00 0.00 34.63 2.29
8071 8831 8.177663 GTGATTCCAACAAATGACTACATACAG 58.822 37.037 0.00 0.00 35.50 2.74
8072 8832 8.100164 TGATTCCAACAAATGACTACATACAGA 58.900 33.333 0.00 0.00 35.50 3.41
8073 8833 7.905604 TTCCAACAAATGACTACATACAGAG 57.094 36.000 0.00 0.00 35.50 3.35
8074 8834 5.874810 TCCAACAAATGACTACATACAGAGC 59.125 40.000 0.00 0.00 35.50 4.09
8076 8836 6.149308 CCAACAAATGACTACATACAGAGCAA 59.851 38.462 0.00 0.00 35.50 3.91
8078 8838 7.744087 ACAAATGACTACATACAGAGCAAAA 57.256 32.000 0.00 0.00 35.50 2.44
8080 8840 8.239314 ACAAATGACTACATACAGAGCAAAATG 58.761 33.333 0.00 0.00 35.50 2.32
8081 8841 8.453320 CAAATGACTACATACAGAGCAAAATGA 58.547 33.333 0.00 0.00 35.50 2.57
8082 8842 7.783090 ATGACTACATACAGAGCAAAATGAG 57.217 36.000 0.00 0.00 34.71 2.90
8084 8844 6.591448 TGACTACATACAGAGCAAAATGAGTG 59.409 38.462 0.00 0.00 0.00 3.51
8086 8846 7.161404 ACTACATACAGAGCAAAATGAGTGAA 58.839 34.615 0.00 0.00 0.00 3.18
8087 8847 7.826252 ACTACATACAGAGCAAAATGAGTGAAT 59.174 33.333 0.00 0.00 0.00 2.57
8088 8848 7.081526 ACATACAGAGCAAAATGAGTGAATC 57.918 36.000 0.00 0.00 0.00 2.52
8089 8849 6.883217 ACATACAGAGCAAAATGAGTGAATCT 59.117 34.615 0.00 0.00 0.00 2.40
8090 8850 8.043113 ACATACAGAGCAAAATGAGTGAATCTA 58.957 33.333 0.00 0.00 0.00 1.98
8091 8851 6.734104 ACAGAGCAAAATGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
8092 8852 6.233434 ACAGAGCAAAATGAGTGAATCTACA 58.767 36.000 0.00 0.00 0.00 2.74
8093 8853 6.148480 ACAGAGCAAAATGAGTGAATCTACAC 59.852 38.462 0.00 0.00 40.60 2.90
8135 8895 9.653287 CATACATCCGTATGTTATAGTCCATTT 57.347 33.333 0.00 0.00 46.70 2.32
8162 8922 8.850007 AAATGTCTAAAAAGACTACTCCCTTC 57.150 34.615 7.04 0.00 39.41 3.46
8163 8923 6.022163 TGTCTAAAAAGACTACTCCCTTCG 57.978 41.667 7.04 0.00 39.41 3.79
8164 8924 5.537674 TGTCTAAAAAGACTACTCCCTTCGT 59.462 40.000 7.04 0.00 39.41 3.85
8165 8925 6.716628 TGTCTAAAAAGACTACTCCCTTCGTA 59.283 38.462 7.04 0.00 39.41 3.43
8166 8926 7.395489 TGTCTAAAAAGACTACTCCCTTCGTAT 59.605 37.037 7.04 0.00 39.41 3.06
8167 8927 8.897752 GTCTAAAAAGACTACTCCCTTCGTATA 58.102 37.037 0.00 0.00 36.01 1.47
8168 8928 9.466497 TCTAAAAAGACTACTCCCTTCGTATAA 57.534 33.333 0.00 0.00 0.00 0.98
8169 8929 9.733219 CTAAAAAGACTACTCCCTTCGTATAAG 57.267 37.037 0.00 0.00 0.00 1.73
8170 8930 7.715266 AAAAGACTACTCCCTTCGTATAAGT 57.285 36.000 0.00 0.00 0.00 2.24
8171 8931 6.696441 AAGACTACTCCCTTCGTATAAGTG 57.304 41.667 0.00 0.00 0.00 3.16
8172 8932 5.999044 AGACTACTCCCTTCGTATAAGTGA 58.001 41.667 0.00 0.00 0.00 3.41
8173 8933 6.603224 AGACTACTCCCTTCGTATAAGTGAT 58.397 40.000 0.00 0.00 0.00 3.06
8174 8934 7.061688 AGACTACTCCCTTCGTATAAGTGATT 58.938 38.462 0.00 0.00 0.00 2.57
8175 8935 7.229106 AGACTACTCCCTTCGTATAAGTGATTC 59.771 40.741 0.00 0.00 0.00 2.52
8176 8936 5.184340 ACTCCCTTCGTATAAGTGATTCG 57.816 43.478 0.00 0.00 0.00 3.34
8177 8937 4.885907 ACTCCCTTCGTATAAGTGATTCGA 59.114 41.667 0.00 0.00 35.77 3.71
8178 8938 5.179045 TCCCTTCGTATAAGTGATTCGAC 57.821 43.478 0.00 0.00 37.11 4.20
8179 8939 4.885907 TCCCTTCGTATAAGTGATTCGACT 59.114 41.667 0.00 0.00 37.11 4.18
8180 8940 5.359009 TCCCTTCGTATAAGTGATTCGACTT 59.641 40.000 0.00 0.00 37.11 3.01
8181 8941 6.040878 CCCTTCGTATAAGTGATTCGACTTT 58.959 40.000 0.00 0.00 37.11 2.66
8182 8942 6.019801 CCCTTCGTATAAGTGATTCGACTTTG 60.020 42.308 0.00 0.00 37.11 2.77
8183 8943 6.530534 CCTTCGTATAAGTGATTCGACTTTGT 59.469 38.462 0.00 0.00 37.11 2.83
8184 8944 7.699391 CCTTCGTATAAGTGATTCGACTTTGTA 59.301 37.037 0.00 0.00 37.11 2.41
8185 8945 7.959718 TCGTATAAGTGATTCGACTTTGTAC 57.040 36.000 0.00 0.00 37.38 2.90
8186 8946 7.755591 TCGTATAAGTGATTCGACTTTGTACT 58.244 34.615 0.00 0.00 37.38 2.73
8187 8947 8.882736 TCGTATAAGTGATTCGACTTTGTACTA 58.117 33.333 0.00 0.00 37.38 1.82
8188 8948 9.494479 CGTATAAGTGATTCGACTTTGTACTAA 57.506 33.333 0.00 0.00 37.38 2.24
8193 8953 9.878599 AAGTGATTCGACTTTGTACTAATTTTG 57.121 29.630 0.00 0.00 31.92 2.44
8194 8954 9.052759 AGTGATTCGACTTTGTACTAATTTTGT 57.947 29.630 0.00 0.00 0.00 2.83
8216 8976 9.695526 TTTGTATTAAAGCTAGTACAAAGTCGA 57.304 29.630 11.30 0.00 41.52 4.20
8217 8977 8.906636 TGTATTAAAGCTAGTACAAAGTCGAG 57.093 34.615 0.00 0.00 29.89 4.04
8218 8978 8.517878 TGTATTAAAGCTAGTACAAAGTCGAGT 58.482 33.333 0.00 0.00 29.89 4.18
8219 8979 9.008289 GTATTAAAGCTAGTACAAAGTCGAGTC 57.992 37.037 0.00 0.00 0.00 3.36
8220 8980 5.449107 AAAGCTAGTACAAAGTCGAGTCA 57.551 39.130 0.00 0.00 0.00 3.41
8221 8981 4.422546 AGCTAGTACAAAGTCGAGTCAC 57.577 45.455 0.00 0.00 0.00 3.67
8222 8982 4.073549 AGCTAGTACAAAGTCGAGTCACT 58.926 43.478 0.00 0.00 0.00 3.41
8223 8983 4.519730 AGCTAGTACAAAGTCGAGTCACTT 59.480 41.667 0.00 3.11 38.30 3.16
8224 8984 5.704515 AGCTAGTACAAAGTCGAGTCACTTA 59.295 40.000 0.00 0.00 35.45 2.24
8225 8985 6.374894 AGCTAGTACAAAGTCGAGTCACTTAT 59.625 38.462 0.00 4.10 35.45 1.73
8226 8986 7.028361 GCTAGTACAAAGTCGAGTCACTTATT 58.972 38.462 0.00 2.93 35.45 1.40
8227 8987 7.541437 GCTAGTACAAAGTCGAGTCACTTATTT 59.459 37.037 0.00 1.15 35.45 1.40
8228 8988 9.408069 CTAGTACAAAGTCGAGTCACTTATTTT 57.592 33.333 0.00 0.00 35.45 1.82
8229 8989 8.073355 AGTACAAAGTCGAGTCACTTATTTTG 57.927 34.615 0.00 7.24 35.45 2.44
8230 8990 6.300354 ACAAAGTCGAGTCACTTATTTTGG 57.700 37.500 11.39 0.00 35.45 3.28
8231 8991 5.238650 ACAAAGTCGAGTCACTTATTTTGGG 59.761 40.000 11.39 0.00 35.45 4.12
8232 8992 4.884668 AGTCGAGTCACTTATTTTGGGA 57.115 40.909 0.00 0.00 0.00 4.37
8233 8993 5.422214 AGTCGAGTCACTTATTTTGGGAT 57.578 39.130 0.00 0.00 0.00 3.85
8234 8994 5.178797 AGTCGAGTCACTTATTTTGGGATG 58.821 41.667 0.00 0.00 0.00 3.51
8235 8995 4.332819 GTCGAGTCACTTATTTTGGGATGG 59.667 45.833 0.00 0.00 0.00 3.51
8236 8996 4.224147 TCGAGTCACTTATTTTGGGATGGA 59.776 41.667 0.00 0.00 0.00 3.41
8237 8997 4.572389 CGAGTCACTTATTTTGGGATGGAG 59.428 45.833 0.00 0.00 0.00 3.86
8238 8998 5.626809 CGAGTCACTTATTTTGGGATGGAGA 60.627 44.000 0.00 0.00 0.00 3.71
8239 8999 5.749462 AGTCACTTATTTTGGGATGGAGAG 58.251 41.667 0.00 0.00 0.00 3.20
8240 9000 5.488919 AGTCACTTATTTTGGGATGGAGAGA 59.511 40.000 0.00 0.00 0.00 3.10
8241 9001 5.819901 GTCACTTATTTTGGGATGGAGAGAG 59.180 44.000 0.00 0.00 0.00 3.20
8242 9002 5.488919 TCACTTATTTTGGGATGGAGAGAGT 59.511 40.000 0.00 0.00 0.00 3.24
8243 9003 6.672218 TCACTTATTTTGGGATGGAGAGAGTA 59.328 38.462 0.00 0.00 0.00 2.59
8244 9004 7.348274 TCACTTATTTTGGGATGGAGAGAGTAT 59.652 37.037 0.00 0.00 0.00 2.12
8245 9005 7.995488 CACTTATTTTGGGATGGAGAGAGTATT 59.005 37.037 0.00 0.00 0.00 1.89
8246 9006 8.560903 ACTTATTTTGGGATGGAGAGAGTATTT 58.439 33.333 0.00 0.00 0.00 1.40
8249 9009 6.500589 TTTGGGATGGAGAGAGTATTTAGG 57.499 41.667 0.00 0.00 0.00 2.69
8250 9010 5.418692 TGGGATGGAGAGAGTATTTAGGA 57.581 43.478 0.00 0.00 0.00 2.94
8251 9011 5.788430 TGGGATGGAGAGAGTATTTAGGAA 58.212 41.667 0.00 0.00 0.00 3.36
8252 9012 5.602978 TGGGATGGAGAGAGTATTTAGGAAC 59.397 44.000 0.00 0.00 0.00 3.62
8253 9013 5.279056 GGGATGGAGAGAGTATTTAGGAACG 60.279 48.000 0.00 0.00 0.00 3.95
8275 9035 2.972713 GAGGGAGTATAAGGCATCCACA 59.027 50.000 0.00 0.00 33.24 4.17
8293 9053 3.573967 CCACATTTTCCACCAGTTAGCTT 59.426 43.478 0.00 0.00 0.00 3.74
8320 9098 2.589798 TTTCTAGAATACGCACGGGG 57.410 50.000 5.89 0.00 0.00 5.73
8372 9150 5.633830 AATGCAGTTGGATCTGTAACTTG 57.366 39.130 0.00 5.89 35.08 3.16
8384 9162 4.318332 TCTGTAACTTGTTGATGCCTCAG 58.682 43.478 0.00 0.00 31.68 3.35
8385 9163 3.411446 TGTAACTTGTTGATGCCTCAGG 58.589 45.455 0.00 0.00 31.68 3.86
8415 9193 0.038251 GTGAGCTGTGACGATGTCCA 60.038 55.000 0.00 0.00 0.00 4.02
8416 9194 0.897621 TGAGCTGTGACGATGTCCAT 59.102 50.000 0.00 0.00 0.00 3.41
8417 9195 1.134995 TGAGCTGTGACGATGTCCATC 60.135 52.381 0.00 0.00 34.56 3.51
8418 9196 0.897621 AGCTGTGACGATGTCCATCA 59.102 50.000 7.94 0.00 37.69 3.07
8479 9257 3.155167 GACCGGGGCGAAGGAGAT 61.155 66.667 6.32 0.00 0.00 2.75
8491 9269 1.908340 AAGGAGATGAGCTTGCGCCT 61.908 55.000 4.18 0.00 36.60 5.52
8566 9344 3.173240 GTTCAGCGCCTCGACGAC 61.173 66.667 2.29 0.00 34.06 4.34
8619 9397 3.497115 TGCCCAGCACCACCTTGA 61.497 61.111 0.00 0.00 31.71 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.174639 TGGTTGGGGATAGCCATTGTAG 59.825 50.000 0.00 0.00 35.15 2.74
1 2 2.209758 TGGTTGGGGATAGCCATTGTA 58.790 47.619 0.00 0.00 35.15 2.41
2 3 1.006813 TGGTTGGGGATAGCCATTGT 58.993 50.000 0.00 0.00 35.15 2.71
3 4 1.965643 CATGGTTGGGGATAGCCATTG 59.034 52.381 0.00 0.00 39.31 2.82
4 5 1.575304 ACATGGTTGGGGATAGCCATT 59.425 47.619 0.00 0.00 39.31 3.16
5 6 1.234806 ACATGGTTGGGGATAGCCAT 58.765 50.000 0.00 0.00 41.63 4.40
6 7 1.006813 AACATGGTTGGGGATAGCCA 58.993 50.000 0.00 0.00 35.33 4.75
7 8 2.031870 GAAACATGGTTGGGGATAGCC 58.968 52.381 0.00 0.00 0.00 3.93
8 9 2.733956 TGAAACATGGTTGGGGATAGC 58.266 47.619 0.00 0.00 0.00 2.97
9 10 3.891366 GGATGAAACATGGTTGGGGATAG 59.109 47.826 0.00 0.00 0.00 2.08
10 11 3.531397 AGGATGAAACATGGTTGGGGATA 59.469 43.478 0.00 0.00 0.00 2.59
11 12 2.315763 AGGATGAAACATGGTTGGGGAT 59.684 45.455 0.00 0.00 0.00 3.85
12 13 1.715931 AGGATGAAACATGGTTGGGGA 59.284 47.619 0.00 0.00 0.00 4.81
13 14 2.236489 AGGATGAAACATGGTTGGGG 57.764 50.000 0.00 0.00 0.00 4.96
14 15 2.497273 GGAAGGATGAAACATGGTTGGG 59.503 50.000 0.00 0.00 0.00 4.12
15 16 3.164268 TGGAAGGATGAAACATGGTTGG 58.836 45.455 0.00 0.00 0.00 3.77
16 17 4.142093 GGATGGAAGGATGAAACATGGTTG 60.142 45.833 0.00 0.00 0.00 3.77
17 18 4.026052 GGATGGAAGGATGAAACATGGTT 58.974 43.478 0.00 0.00 0.00 3.67
18 19 3.011595 TGGATGGAAGGATGAAACATGGT 59.988 43.478 0.00 0.00 0.00 3.55
19 20 3.634504 TGGATGGAAGGATGAAACATGG 58.365 45.455 0.00 0.00 0.00 3.66
20 21 5.047164 TGTTTGGATGGAAGGATGAAACATG 60.047 40.000 0.00 0.00 29.35 3.21
21 22 5.085920 TGTTTGGATGGAAGGATGAAACAT 58.914 37.500 0.00 0.00 29.35 2.71
22 23 4.478203 TGTTTGGATGGAAGGATGAAACA 58.522 39.130 0.00 0.00 31.29 2.83
23 24 5.467035 TTGTTTGGATGGAAGGATGAAAC 57.533 39.130 0.00 0.00 0.00 2.78
24 25 6.126940 TGTTTTGTTTGGATGGAAGGATGAAA 60.127 34.615 0.00 0.00 0.00 2.69
25 26 5.365025 TGTTTTGTTTGGATGGAAGGATGAA 59.635 36.000 0.00 0.00 0.00 2.57
26 27 4.898265 TGTTTTGTTTGGATGGAAGGATGA 59.102 37.500 0.00 0.00 0.00 2.92
27 28 5.212532 TGTTTTGTTTGGATGGAAGGATG 57.787 39.130 0.00 0.00 0.00 3.51
28 29 5.280113 CCATGTTTTGTTTGGATGGAAGGAT 60.280 40.000 0.00 0.00 36.45 3.24
29 30 4.040217 CCATGTTTTGTTTGGATGGAAGGA 59.960 41.667 0.00 0.00 36.45 3.36
30 31 4.317488 CCATGTTTTGTTTGGATGGAAGG 58.683 43.478 0.00 0.00 36.45 3.46
31 32 4.040217 TCCCATGTTTTGTTTGGATGGAAG 59.960 41.667 0.00 0.00 36.45 3.46
32 33 3.969976 TCCCATGTTTTGTTTGGATGGAA 59.030 39.130 0.00 0.00 36.45 3.53
33 34 3.581101 TCCCATGTTTTGTTTGGATGGA 58.419 40.909 0.00 0.00 36.45 3.41
34 35 4.556592 ATCCCATGTTTTGTTTGGATGG 57.443 40.909 0.00 0.00 31.60 3.51
35 36 5.874261 GGTTATCCCATGTTTTGTTTGGATG 59.126 40.000 6.22 0.00 34.57 3.51
36 37 5.784906 AGGTTATCCCATGTTTTGTTTGGAT 59.215 36.000 0.00 0.00 36.59 3.41
37 38 5.151454 AGGTTATCCCATGTTTTGTTTGGA 58.849 37.500 0.00 0.00 34.66 3.53
38 39 5.011533 TGAGGTTATCCCATGTTTTGTTTGG 59.988 40.000 0.00 0.00 34.66 3.28
39 40 5.925969 GTGAGGTTATCCCATGTTTTGTTTG 59.074 40.000 0.00 0.00 34.66 2.93
40 41 5.011635 GGTGAGGTTATCCCATGTTTTGTTT 59.988 40.000 0.00 0.00 34.66 2.83
41 42 4.526650 GGTGAGGTTATCCCATGTTTTGTT 59.473 41.667 0.00 0.00 34.66 2.83
42 43 4.086457 GGTGAGGTTATCCCATGTTTTGT 58.914 43.478 0.00 0.00 34.66 2.83
43 44 3.447229 GGGTGAGGTTATCCCATGTTTTG 59.553 47.826 0.00 0.00 40.79 2.44
44 45 3.336694 AGGGTGAGGTTATCCCATGTTTT 59.663 43.478 0.00 0.00 43.31 2.43
45 46 2.926329 AGGGTGAGGTTATCCCATGTTT 59.074 45.455 0.00 0.00 43.31 2.83
46 47 2.573463 AGGGTGAGGTTATCCCATGTT 58.427 47.619 0.00 0.00 43.31 2.71
47 48 2.286935 AGGGTGAGGTTATCCCATGT 57.713 50.000 0.00 0.00 43.31 3.21
48 49 2.158608 GGAAGGGTGAGGTTATCCCATG 60.159 54.545 0.00 0.00 43.31 3.66
49 50 2.136026 GGAAGGGTGAGGTTATCCCAT 58.864 52.381 0.00 0.00 43.31 4.00
50 51 1.203505 TGGAAGGGTGAGGTTATCCCA 60.204 52.381 0.00 0.00 43.31 4.37
51 52 1.591768 TGGAAGGGTGAGGTTATCCC 58.408 55.000 0.00 0.00 41.36 3.85
52 53 2.356844 GGTTGGAAGGGTGAGGTTATCC 60.357 54.545 0.00 0.00 0.00 2.59
53 54 2.307686 TGGTTGGAAGGGTGAGGTTATC 59.692 50.000 0.00 0.00 0.00 1.75
54 55 2.354328 TGGTTGGAAGGGTGAGGTTAT 58.646 47.619 0.00 0.00 0.00 1.89
55 56 1.822425 TGGTTGGAAGGGTGAGGTTA 58.178 50.000 0.00 0.00 0.00 2.85
56 57 0.930726 TTGGTTGGAAGGGTGAGGTT 59.069 50.000 0.00 0.00 0.00 3.50
57 58 0.930726 TTTGGTTGGAAGGGTGAGGT 59.069 50.000 0.00 0.00 0.00 3.85
58 59 1.328279 GTTTGGTTGGAAGGGTGAGG 58.672 55.000 0.00 0.00 0.00 3.86
59 60 1.956477 CTGTTTGGTTGGAAGGGTGAG 59.044 52.381 0.00 0.00 0.00 3.51
60 61 1.566703 TCTGTTTGGTTGGAAGGGTGA 59.433 47.619 0.00 0.00 0.00 4.02
61 62 2.065899 TCTGTTTGGTTGGAAGGGTG 57.934 50.000 0.00 0.00 0.00 4.61
62 63 2.838637 TTCTGTTTGGTTGGAAGGGT 57.161 45.000 0.00 0.00 0.00 4.34
63 64 4.441792 CTTTTTCTGTTTGGTTGGAAGGG 58.558 43.478 0.00 0.00 0.00 3.95
64 65 4.441792 CCTTTTTCTGTTTGGTTGGAAGG 58.558 43.478 0.00 0.00 0.00 3.46
65 66 4.441792 CCCTTTTTCTGTTTGGTTGGAAG 58.558 43.478 0.00 0.00 0.00 3.46
66 67 3.369997 GCCCTTTTTCTGTTTGGTTGGAA 60.370 43.478 0.00 0.00 0.00 3.53
67 68 2.169561 GCCCTTTTTCTGTTTGGTTGGA 59.830 45.455 0.00 0.00 0.00 3.53
68 69 2.170397 AGCCCTTTTTCTGTTTGGTTGG 59.830 45.455 0.00 0.00 0.00 3.77
69 70 3.541996 AGCCCTTTTTCTGTTTGGTTG 57.458 42.857 0.00 0.00 0.00 3.77
70 71 4.283467 GGATAGCCCTTTTTCTGTTTGGTT 59.717 41.667 0.00 0.00 0.00 3.67
71 72 3.832490 GGATAGCCCTTTTTCTGTTTGGT 59.168 43.478 0.00 0.00 0.00 3.67
72 73 4.456280 GGATAGCCCTTTTTCTGTTTGG 57.544 45.455 0.00 0.00 0.00 3.28
87 88 1.124477 ACCAGCTGGCTAGGGATAGC 61.124 60.000 33.06 0.00 42.12 2.97
88 89 1.071385 CAACCAGCTGGCTAGGGATAG 59.929 57.143 33.06 2.57 39.32 2.08
89 90 1.131638 CAACCAGCTGGCTAGGGATA 58.868 55.000 33.06 0.00 39.32 2.59
90 91 1.639635 CCAACCAGCTGGCTAGGGAT 61.640 60.000 33.06 8.48 39.32 3.85
91 92 2.300967 CCAACCAGCTGGCTAGGGA 61.301 63.158 33.06 0.00 39.32 4.20
92 93 2.273449 CCAACCAGCTGGCTAGGG 59.727 66.667 33.06 23.10 39.32 3.53
93 94 2.273449 CCCAACCAGCTGGCTAGG 59.727 66.667 33.06 28.12 39.32 3.02
94 95 1.639635 ATCCCCAACCAGCTGGCTAG 61.640 60.000 33.06 21.19 39.32 3.42
95 96 1.619363 ATCCCCAACCAGCTGGCTA 60.619 57.895 33.06 11.90 39.32 3.93
96 97 2.943265 ATCCCCAACCAGCTGGCT 60.943 61.111 33.06 19.23 39.32 4.75
97 98 2.757099 CATCCCCAACCAGCTGGC 60.757 66.667 33.06 0.00 39.32 4.85
98 99 2.757099 GCATCCCCAACCAGCTGG 60.757 66.667 31.60 31.60 42.17 4.85
99 100 2.757099 GGCATCCCCAACCAGCTG 60.757 66.667 6.78 6.78 0.00 4.24
115 116 1.766461 AGATTAGGGTGGCCGAGGG 60.766 63.158 0.00 0.00 0.00 4.30
116 117 1.338136 ACAGATTAGGGTGGCCGAGG 61.338 60.000 0.00 0.00 0.00 4.63
117 118 0.105039 GACAGATTAGGGTGGCCGAG 59.895 60.000 0.00 0.00 0.00 4.63
118 119 1.335132 GGACAGATTAGGGTGGCCGA 61.335 60.000 0.00 0.00 30.16 5.54
119 120 1.146263 GGACAGATTAGGGTGGCCG 59.854 63.158 0.00 0.00 30.16 6.13
120 121 0.988678 AGGGACAGATTAGGGTGGCC 60.989 60.000 0.00 0.00 41.76 5.36
121 122 0.470341 GAGGGACAGATTAGGGTGGC 59.530 60.000 0.00 0.00 0.00 5.01
122 123 1.879575 TGAGGGACAGATTAGGGTGG 58.120 55.000 0.00 0.00 0.00 4.61
123 124 3.610911 GTTTGAGGGACAGATTAGGGTG 58.389 50.000 0.00 0.00 0.00 4.61
124 125 2.576648 GGTTTGAGGGACAGATTAGGGT 59.423 50.000 0.00 0.00 0.00 4.34
125 126 2.576191 TGGTTTGAGGGACAGATTAGGG 59.424 50.000 0.00 0.00 0.00 3.53
126 127 4.301072 TTGGTTTGAGGGACAGATTAGG 57.699 45.455 0.00 0.00 0.00 2.69
127 128 5.048713 GTGTTTGGTTTGAGGGACAGATTAG 60.049 44.000 0.00 0.00 0.00 1.73
128 129 4.825085 GTGTTTGGTTTGAGGGACAGATTA 59.175 41.667 0.00 0.00 0.00 1.75
129 130 3.636764 GTGTTTGGTTTGAGGGACAGATT 59.363 43.478 0.00 0.00 0.00 2.40
130 131 3.222603 GTGTTTGGTTTGAGGGACAGAT 58.777 45.455 0.00 0.00 0.00 2.90
131 132 2.025793 TGTGTTTGGTTTGAGGGACAGA 60.026 45.455 0.00 0.00 0.00 3.41
132 133 2.374184 TGTGTTTGGTTTGAGGGACAG 58.626 47.619 0.00 0.00 0.00 3.51
133 134 2.516227 TGTGTTTGGTTTGAGGGACA 57.484 45.000 0.00 0.00 0.00 4.02
134 135 2.296190 GGATGTGTTTGGTTTGAGGGAC 59.704 50.000 0.00 0.00 0.00 4.46
135 136 2.176798 AGGATGTGTTTGGTTTGAGGGA 59.823 45.455 0.00 0.00 0.00 4.20
136 137 2.597455 AGGATGTGTTTGGTTTGAGGG 58.403 47.619 0.00 0.00 0.00 4.30
137 138 5.070001 TCTAAGGATGTGTTTGGTTTGAGG 58.930 41.667 0.00 0.00 0.00 3.86
138 139 6.633500 TTCTAAGGATGTGTTTGGTTTGAG 57.367 37.500 0.00 0.00 0.00 3.02
139 140 7.411486 TTTTCTAAGGATGTGTTTGGTTTGA 57.589 32.000 0.00 0.00 0.00 2.69
140 141 7.763985 AGTTTTTCTAAGGATGTGTTTGGTTTG 59.236 33.333 0.00 0.00 0.00 2.93
141 142 7.763985 CAGTTTTTCTAAGGATGTGTTTGGTTT 59.236 33.333 0.00 0.00 0.00 3.27
142 143 7.264947 CAGTTTTTCTAAGGATGTGTTTGGTT 58.735 34.615 0.00 0.00 0.00 3.67
143 144 6.682861 GCAGTTTTTCTAAGGATGTGTTTGGT 60.683 38.462 0.00 0.00 0.00 3.67
144 145 5.691754 GCAGTTTTTCTAAGGATGTGTTTGG 59.308 40.000 0.00 0.00 0.00 3.28
145 146 6.272318 TGCAGTTTTTCTAAGGATGTGTTTG 58.728 36.000 0.00 0.00 0.00 2.93
146 147 6.463995 TGCAGTTTTTCTAAGGATGTGTTT 57.536 33.333 0.00 0.00 0.00 2.83
147 148 6.463995 TTGCAGTTTTTCTAAGGATGTGTT 57.536 33.333 0.00 0.00 0.00 3.32
148 149 6.463995 TTTGCAGTTTTTCTAAGGATGTGT 57.536 33.333 0.00 0.00 0.00 3.72
149 150 7.147312 TCATTTGCAGTTTTTCTAAGGATGTG 58.853 34.615 0.00 0.00 0.00 3.21
150 151 7.288810 TCATTTGCAGTTTTTCTAAGGATGT 57.711 32.000 0.00 0.00 0.00 3.06
151 152 8.767478 ATTCATTTGCAGTTTTTCTAAGGATG 57.233 30.769 0.00 0.00 0.00 3.51
152 153 9.428097 GAATTCATTTGCAGTTTTTCTAAGGAT 57.572 29.630 0.00 0.00 0.00 3.24
153 154 8.420222 TGAATTCATTTGCAGTTTTTCTAAGGA 58.580 29.630 3.38 0.00 0.00 3.36
154 155 8.592105 TGAATTCATTTGCAGTTTTTCTAAGG 57.408 30.769 3.38 0.00 0.00 2.69
197 198 8.001881 TGCACTTTGTTGTTTAGAGGATTTTA 57.998 30.769 0.00 0.00 0.00 1.52
203 204 4.044426 GCTTGCACTTTGTTGTTTAGAGG 58.956 43.478 0.00 0.00 0.00 3.69
206 207 4.864247 ACTTGCTTGCACTTTGTTGTTTAG 59.136 37.500 0.00 0.00 0.00 1.85
340 341 6.017192 ACACTCTAATCCTCCACTTCTTACA 58.983 40.000 0.00 0.00 0.00 2.41
471 472 3.574826 CGGTGGGAGTATTTTGGGAAAAA 59.425 43.478 0.00 0.00 33.47 1.94
472 473 3.158676 CGGTGGGAGTATTTTGGGAAAA 58.841 45.455 0.00 0.00 34.41 2.29
473 474 2.108601 ACGGTGGGAGTATTTTGGGAAA 59.891 45.455 0.00 0.00 0.00 3.13
476 477 2.209690 AACGGTGGGAGTATTTTGGG 57.790 50.000 0.00 0.00 0.00 4.12
538 539 7.660208 GGATTTTCTGTAGACTTGGTCAAACTA 59.340 37.037 0.52 0.00 34.60 2.24
713 719 9.997482 CTTACATTTTCTACACTCTACTCTCTC 57.003 37.037 0.00 0.00 0.00 3.20
755 764 9.226606 ACATTGGTCGTTTGATTTCTAGAATTA 57.773 29.630 5.89 0.00 0.00 1.40
764 773 7.860872 GTCTTTCTTACATTGGTCGTTTGATTT 59.139 33.333 0.00 0.00 0.00 2.17
776 785 9.103861 GGATCCTTAGAAGTCTTTCTTACATTG 57.896 37.037 3.84 0.00 40.79 2.82
779 788 7.792364 TGGATCCTTAGAAGTCTTTCTTACA 57.208 36.000 14.23 0.00 40.79 2.41
824 833 5.232463 TGCTCCTTTGATTCAAAGCAATTC 58.768 37.500 26.74 15.97 46.44 2.17
1305 1469 7.907214 AGTAATGTACTCAAATTCCTGACAC 57.093 36.000 0.00 0.00 32.47 3.67
1379 1543 3.750371 AGCGCACCAGCCATTATTAATA 58.250 40.909 11.47 0.00 37.52 0.98
1381 1545 2.051334 AGCGCACCAGCCATTATTAA 57.949 45.000 11.47 0.00 37.52 1.40
1383 1547 0.740737 GAAGCGCACCAGCCATTATT 59.259 50.000 11.47 0.00 37.52 1.40
1404 1589 4.785511 TCACCACTTAACTAGAGAGCAC 57.214 45.455 0.00 0.00 0.00 4.40
1407 1592 6.926272 GGCATATTCACCACTTAACTAGAGAG 59.074 42.308 0.00 0.00 0.00 3.20
1438 1623 4.587262 TCTGCATTCCCGCGGTATATATAT 59.413 41.667 26.12 0.00 39.42 0.86
1439 1624 3.955551 TCTGCATTCCCGCGGTATATATA 59.044 43.478 26.12 3.63 39.42 0.86
1444 1629 0.603707 CATCTGCATTCCCGCGGTAT 60.604 55.000 26.12 14.41 39.42 2.73
1474 1659 4.726416 CACTGCCAACACACAAAGATATC 58.274 43.478 0.00 0.00 0.00 1.63
1490 1675 3.874392 ACTGGAAATATTTGCACTGCC 57.126 42.857 17.38 6.38 34.71 4.85
1555 1740 0.887387 GTCGGGCAGCAAAAGGTACA 60.887 55.000 0.00 0.00 0.00 2.90
1579 1764 7.274904 CAGATAAGCACCATGAACAAATTCTTG 59.725 37.037 0.00 0.00 38.90 3.02
1864 2053 7.119116 TCAGTTGTGCGAATAAACTTGTCATAT 59.881 33.333 0.00 0.00 31.88 1.78
2162 2356 4.669206 TCCTGTGTGCAATCAACAAAAT 57.331 36.364 0.00 0.00 0.00 1.82
2355 2549 8.201464 TGAGCAAAACATTATAGAGGATAACGA 58.799 33.333 0.00 0.00 32.72 3.85
2378 2572 6.533012 ACTCGATAAACACACATCAGATTGAG 59.467 38.462 0.00 0.00 32.07 3.02
2751 2956 6.696411 TGGAAGCTTTCTTTTTCAAAACTGA 58.304 32.000 6.25 0.00 31.48 3.41
2801 3007 8.610855 TTCACTGTCTATCGACTATTTTAACG 57.389 34.615 0.00 0.00 40.86 3.18
2846 3052 5.957771 AGCTAGGAATTACATGAGAACCA 57.042 39.130 0.00 0.00 0.00 3.67
2881 3087 0.392461 GCCGCTAAACCCTGACATGA 60.392 55.000 0.00 0.00 0.00 3.07
2910 3119 1.286553 TGACTCCCCAACACCAAACTT 59.713 47.619 0.00 0.00 0.00 2.66
2928 3137 4.463539 CAGGATTGGATTGAACAACCATGA 59.536 41.667 0.00 0.00 33.56 3.07
2955 3164 2.094494 AGCAACTACATCAGGTGACGAG 60.094 50.000 0.00 0.00 45.69 4.18
3008 3217 3.460857 TTTTAGCCAAAACACCGCAAT 57.539 38.095 0.00 0.00 0.00 3.56
3175 3385 6.493802 TGTGTTACTGTGAGAAGAATAGAGGT 59.506 38.462 0.00 0.00 0.00 3.85
3439 3649 7.826744 AGAAATAGAAAAGTCTCTCAATCCACC 59.173 37.037 0.00 0.00 35.12 4.61
3554 3764 3.689414 TGCCAAGCAGCAGGAATG 58.311 55.556 8.04 0.00 38.00 2.67
3577 3795 5.818136 ATACGCAAACTGTTCATGCTTAT 57.182 34.783 13.50 11.26 37.92 1.73
3831 4049 8.621532 AGATTTCAAGAAGTTAACTGCACATA 57.378 30.769 16.18 0.00 0.00 2.29
3835 4053 7.566760 TCAAGATTTCAAGAAGTTAACTGCA 57.433 32.000 16.18 0.00 0.00 4.41
4024 4247 3.181478 CCGACCTTTCCTATCAGGTGTAC 60.181 52.174 0.00 0.00 43.94 2.90
4368 4595 6.771267 AGGGCCCTATCGAAATAAGTTTAAAG 59.229 38.462 27.42 0.00 0.00 1.85
4452 4679 1.071699 GACCTACCAGTGCCAAGTCAA 59.928 52.381 0.00 0.00 0.00 3.18
4743 4970 6.223138 TCGTCACAAACTGAATGAACATAC 57.777 37.500 0.00 0.00 0.00 2.39
4871 5098 2.484264 GGTCACCTTTGTCAAGAATCCG 59.516 50.000 0.00 0.00 30.57 4.18
4995 5222 1.813178 GTAGTTGCAGGAAAAGGCCTC 59.187 52.381 5.23 0.00 35.66 4.70
5522 6241 1.750018 CCATGCGCACCAATGAGGA 60.750 57.895 14.90 0.00 41.22 3.71
5581 6300 4.944962 TTGTCACTCAAAGACACAACTG 57.055 40.909 0.00 0.00 44.95 3.16
5598 6317 8.084684 GGAGCCCAAATAGAATTCATATTTGTC 58.915 37.037 26.96 22.17 44.00 3.18
5607 6326 2.625314 GCTGGGAGCCCAAATAGAATTC 59.375 50.000 9.94 0.00 46.63 2.17
5810 6529 2.165845 ACGTTCTTCTGAATAGTCCCCG 59.834 50.000 0.00 0.00 34.40 5.73
5878 6597 7.938563 AATGAATAAAAGTTTTAGCACGCAA 57.061 28.000 13.25 0.00 0.00 4.85
5901 6620 9.413048 CCAACTAAAGCATAAACCGAAAATAAA 57.587 29.630 0.00 0.00 0.00 1.40
5909 6628 8.671028 AGTTAATACCAACTAAAGCATAAACCG 58.329 33.333 0.00 0.00 36.99 4.44
5939 6658 7.432545 CAGTATCATCACTAACCACTTAAGACG 59.567 40.741 10.09 0.61 0.00 4.18
6115 6834 4.142816 GGTTTGTCATCAGTTCCGAAGATG 60.143 45.833 4.65 4.65 40.29 2.90
6233 6988 4.813697 GGGTTTCAAGCTTTTGTAATGCAA 59.186 37.500 0.00 0.00 34.29 4.08
6292 7047 5.570234 ACGCCAAGAAACAGAACTTAAAA 57.430 34.783 0.00 0.00 0.00 1.52
6313 7068 5.932303 TGCTGGATGTCTTTACTTTCTGTAC 59.068 40.000 0.00 0.00 0.00 2.90
6335 7090 5.303971 ACAGTTCAGCTAGGATCATTATGC 58.696 41.667 0.00 0.00 0.00 3.14
6495 7251 6.594937 GGAAATATCCAAATGCAACATGTGTT 59.405 34.615 0.00 0.00 45.79 3.32
6506 7262 6.432162 AGGTGATGATCGGAAATATCCAAATG 59.568 38.462 0.00 0.00 46.97 2.32
6520 7276 4.626172 CAGATGAATAGCAGGTGATGATCG 59.374 45.833 0.00 0.00 0.00 3.69
6623 7379 3.998341 GCCTTGTCGACCTGTATAAACAA 59.002 43.478 14.12 0.00 34.49 2.83
6775 7531 3.704061 TGTTTACCTTTGCAGCCTTTTCT 59.296 39.130 0.00 0.00 0.00 2.52
6985 7741 8.880750 GGAATTAGGTACTCAAATGTACAGAAC 58.119 37.037 0.33 0.00 43.17 3.01
6996 7752 5.186215 TGTGACATCGGAATTAGGTACTCAA 59.814 40.000 0.00 0.00 41.75 3.02
7058 7814 4.156556 TCATCAGAACAACTAAAGCCATGC 59.843 41.667 0.00 0.00 0.00 4.06
7063 7819 7.862372 TCAACAATTCATCAGAACAACTAAAGC 59.138 33.333 0.00 0.00 36.39 3.51
7071 7827 7.933215 ATCATCTCAACAATTCATCAGAACA 57.067 32.000 0.00 0.00 36.39 3.18
7097 7853 2.568623 ACTCAAACTAGCCACCCAAG 57.431 50.000 0.00 0.00 0.00 3.61
7315 8072 5.601662 ACATACAAGAACATACCCATCTCG 58.398 41.667 0.00 0.00 0.00 4.04
7585 8343 7.960793 TCTCTTCGATTTCGGTTTCTATTTTC 58.039 34.615 0.00 0.00 40.29 2.29
7601 8359 5.486526 ACTTGCTTGATCTTTCTCTTCGAT 58.513 37.500 0.00 0.00 0.00 3.59
7767 8525 9.149225 CTTTTATGCTATCTACACCATCAGATC 57.851 37.037 0.00 0.00 33.58 2.75
7819 8577 8.150945 TGCTAAGTTCAGTTCTCTCTACAAAAT 58.849 33.333 0.00 0.00 0.00 1.82
7870 8628 5.350640 GGAACGTAGGGAGTACAATTTTGAG 59.649 44.000 0.00 0.00 0.00 3.02
7879 8637 6.212888 TCTATTTTGGAACGTAGGGAGTAC 57.787 41.667 0.00 0.00 0.00 2.73
7880 8638 8.416329 GTTATCTATTTTGGAACGTAGGGAGTA 58.584 37.037 0.00 0.00 0.00 2.59
7881 8639 5.952347 ATCTATTTTGGAACGTAGGGAGT 57.048 39.130 0.00 0.00 0.00 3.85
7882 8640 6.704937 GGTTATCTATTTTGGAACGTAGGGAG 59.295 42.308 0.00 0.00 0.00 4.30
7883 8641 6.408434 GGGTTATCTATTTTGGAACGTAGGGA 60.408 42.308 0.00 0.00 0.00 4.20
7884 8642 5.761726 GGGTTATCTATTTTGGAACGTAGGG 59.238 44.000 0.00 0.00 0.00 3.53
7885 8643 6.350906 TGGGTTATCTATTTTGGAACGTAGG 58.649 40.000 0.00 0.00 0.00 3.18
7886 8644 7.551617 AGTTGGGTTATCTATTTTGGAACGTAG 59.448 37.037 0.00 0.00 0.00 3.51
7887 8645 7.396418 AGTTGGGTTATCTATTTTGGAACGTA 58.604 34.615 0.00 0.00 0.00 3.57
7888 8646 6.243148 AGTTGGGTTATCTATTTTGGAACGT 58.757 36.000 0.00 0.00 0.00 3.99
7889 8647 6.753107 AGTTGGGTTATCTATTTTGGAACG 57.247 37.500 0.00 0.00 0.00 3.95
7890 8648 8.364894 ACAAAGTTGGGTTATCTATTTTGGAAC 58.635 33.333 0.00 0.00 0.00 3.62
7891 8649 8.485578 ACAAAGTTGGGTTATCTATTTTGGAA 57.514 30.769 0.00 0.00 0.00 3.53
7892 8650 9.762381 ATACAAAGTTGGGTTATCTATTTTGGA 57.238 29.630 0.00 0.00 0.00 3.53
7930 8688 9.893305 CCGTTTCAAAATAGATGACTTAACTTT 57.107 29.630 0.00 0.00 0.00 2.66
7931 8689 9.280174 TCCGTTTCAAAATAGATGACTTAACTT 57.720 29.630 0.00 0.00 0.00 2.66
7932 8690 8.842358 TCCGTTTCAAAATAGATGACTTAACT 57.158 30.769 0.00 0.00 0.00 2.24
7933 8691 7.692705 GCTCCGTTTCAAAATAGATGACTTAAC 59.307 37.037 0.00 0.00 0.00 2.01
7934 8692 7.412563 CGCTCCGTTTCAAAATAGATGACTTAA 60.413 37.037 0.00 0.00 0.00 1.85
7935 8693 6.035650 CGCTCCGTTTCAAAATAGATGACTTA 59.964 38.462 0.00 0.00 0.00 2.24
7936 8694 5.163854 CGCTCCGTTTCAAAATAGATGACTT 60.164 40.000 0.00 0.00 0.00 3.01
7937 8695 4.330074 CGCTCCGTTTCAAAATAGATGACT 59.670 41.667 0.00 0.00 0.00 3.41
7938 8696 4.328983 TCGCTCCGTTTCAAAATAGATGAC 59.671 41.667 0.00 0.00 0.00 3.06
7939 8697 4.500127 TCGCTCCGTTTCAAAATAGATGA 58.500 39.130 0.00 0.00 0.00 2.92
7940 8698 4.330074 ACTCGCTCCGTTTCAAAATAGATG 59.670 41.667 0.00 0.00 0.00 2.90
7941 8699 4.504858 ACTCGCTCCGTTTCAAAATAGAT 58.495 39.130 0.00 0.00 0.00 1.98
7942 8700 3.921677 ACTCGCTCCGTTTCAAAATAGA 58.078 40.909 0.00 0.00 0.00 1.98
7943 8701 4.863131 AGTACTCGCTCCGTTTCAAAATAG 59.137 41.667 0.00 0.00 0.00 1.73
7944 8702 4.813027 AGTACTCGCTCCGTTTCAAAATA 58.187 39.130 0.00 0.00 0.00 1.40
7945 8703 3.660865 AGTACTCGCTCCGTTTCAAAAT 58.339 40.909 0.00 0.00 0.00 1.82
7946 8704 3.102052 AGTACTCGCTCCGTTTCAAAA 57.898 42.857 0.00 0.00 0.00 2.44
7947 8705 2.806608 AGTACTCGCTCCGTTTCAAA 57.193 45.000 0.00 0.00 0.00 2.69
7948 8706 2.553602 TGTAGTACTCGCTCCGTTTCAA 59.446 45.455 0.00 0.00 0.00 2.69
7949 8707 2.153645 TGTAGTACTCGCTCCGTTTCA 58.846 47.619 0.00 0.00 0.00 2.69
7950 8708 2.907910 TGTAGTACTCGCTCCGTTTC 57.092 50.000 0.00 0.00 0.00 2.78
7951 8709 3.192001 TCAATGTAGTACTCGCTCCGTTT 59.808 43.478 0.00 0.00 0.00 3.60
7952 8710 2.751259 TCAATGTAGTACTCGCTCCGTT 59.249 45.455 0.00 0.00 0.00 4.44
7953 8711 2.355132 CTCAATGTAGTACTCGCTCCGT 59.645 50.000 0.00 0.00 0.00 4.69
7954 8712 2.612672 TCTCAATGTAGTACTCGCTCCG 59.387 50.000 0.00 0.00 0.00 4.63
7955 8713 4.541779 CATCTCAATGTAGTACTCGCTCC 58.458 47.826 0.00 0.00 0.00 4.70
7956 8714 4.541779 CCATCTCAATGTAGTACTCGCTC 58.458 47.826 0.00 0.00 0.00 5.03
7957 8715 3.243569 GCCATCTCAATGTAGTACTCGCT 60.244 47.826 0.00 0.00 0.00 4.93
7958 8716 3.053455 GCCATCTCAATGTAGTACTCGC 58.947 50.000 0.00 0.00 0.00 5.03
7959 8717 4.307443 TGCCATCTCAATGTAGTACTCG 57.693 45.455 0.00 0.00 0.00 4.18
7960 8718 6.985188 TTTTGCCATCTCAATGTAGTACTC 57.015 37.500 0.00 0.00 0.00 2.59
7961 8719 7.148018 CCAATTTTGCCATCTCAATGTAGTACT 60.148 37.037 0.00 0.00 0.00 2.73
8024 8784 8.924511 ATCACCAAAAAGACTTCTATTTGAGA 57.075 30.769 10.94 9.10 35.34 3.27
8025 8785 9.617975 GAATCACCAAAAAGACTTCTATTTGAG 57.382 33.333 10.94 5.59 35.34 3.02
8026 8786 8.576442 GGAATCACCAAAAAGACTTCTATTTGA 58.424 33.333 10.94 2.91 35.34 2.69
8028 8788 8.477419 TGGAATCACCAAAAAGACTTCTATTT 57.523 30.769 0.00 0.00 46.75 1.40
8044 8804 5.957842 TGTAGTCATTTGTTGGAATCACC 57.042 39.130 0.00 0.00 39.54 4.02
8046 8806 8.100164 TCTGTATGTAGTCATTTGTTGGAATCA 58.900 33.333 0.00 0.00 35.70 2.57
8047 8807 8.492673 TCTGTATGTAGTCATTTGTTGGAATC 57.507 34.615 0.00 0.00 35.70 2.52
8048 8808 7.066284 GCTCTGTATGTAGTCATTTGTTGGAAT 59.934 37.037 0.00 0.00 35.70 3.01
8049 8809 6.371548 GCTCTGTATGTAGTCATTTGTTGGAA 59.628 38.462 0.00 0.00 35.70 3.53
8050 8810 5.874810 GCTCTGTATGTAGTCATTTGTTGGA 59.125 40.000 0.00 0.00 35.70 3.53
8051 8811 5.643348 TGCTCTGTATGTAGTCATTTGTTGG 59.357 40.000 0.00 0.00 35.70 3.77
8052 8812 6.726258 TGCTCTGTATGTAGTCATTTGTTG 57.274 37.500 0.00 0.00 35.70 3.33
8055 8815 8.453320 TCATTTTGCTCTGTATGTAGTCATTTG 58.547 33.333 0.00 0.00 35.70 2.32
8056 8816 8.565896 TCATTTTGCTCTGTATGTAGTCATTT 57.434 30.769 0.00 0.00 35.70 2.32
8058 8818 7.279536 CACTCATTTTGCTCTGTATGTAGTCAT 59.720 37.037 0.00 0.00 38.00 3.06
8062 8822 7.601073 TTCACTCATTTTGCTCTGTATGTAG 57.399 36.000 0.00 0.00 0.00 2.74
8063 8823 8.043113 AGATTCACTCATTTTGCTCTGTATGTA 58.957 33.333 0.00 0.00 0.00 2.29
8064 8824 6.883217 AGATTCACTCATTTTGCTCTGTATGT 59.117 34.615 0.00 0.00 0.00 2.29
8065 8825 7.317842 AGATTCACTCATTTTGCTCTGTATG 57.682 36.000 0.00 0.00 0.00 2.39
8067 8827 7.331934 GTGTAGATTCACTCATTTTGCTCTGTA 59.668 37.037 0.00 0.00 35.68 2.74
8068 8828 6.148480 GTGTAGATTCACTCATTTTGCTCTGT 59.852 38.462 0.00 0.00 35.68 3.41
8069 8829 6.370994 AGTGTAGATTCACTCATTTTGCTCTG 59.629 38.462 0.00 0.00 44.07 3.35
8070 8830 6.471146 AGTGTAGATTCACTCATTTTGCTCT 58.529 36.000 0.00 0.00 44.07 4.09
8071 8831 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
8072 8832 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
8073 8833 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
8136 8896 9.286170 GAAGGGAGTAGTCTTTTTAGACATTTT 57.714 33.333 7.92 0.00 41.02 1.82
8137 8897 7.603024 CGAAGGGAGTAGTCTTTTTAGACATTT 59.397 37.037 7.92 0.00 41.02 2.32
8138 8898 7.097834 CGAAGGGAGTAGTCTTTTTAGACATT 58.902 38.462 7.92 0.00 41.02 2.71
8139 8899 6.210984 ACGAAGGGAGTAGTCTTTTTAGACAT 59.789 38.462 7.92 0.00 41.02 3.06
8140 8900 5.537674 ACGAAGGGAGTAGTCTTTTTAGACA 59.462 40.000 7.92 0.00 41.02 3.41
8141 8901 6.023357 ACGAAGGGAGTAGTCTTTTTAGAC 57.977 41.667 0.00 0.00 39.00 2.59
8142 8902 7.951347 ATACGAAGGGAGTAGTCTTTTTAGA 57.049 36.000 0.00 0.00 0.00 2.10
8143 8903 9.733219 CTTATACGAAGGGAGTAGTCTTTTTAG 57.267 37.037 0.00 0.00 0.00 1.85
8144 8904 9.247861 ACTTATACGAAGGGAGTAGTCTTTTTA 57.752 33.333 0.00 0.00 0.00 1.52
8145 8905 8.033626 CACTTATACGAAGGGAGTAGTCTTTTT 58.966 37.037 0.00 0.00 0.00 1.94
8146 8906 7.395489 TCACTTATACGAAGGGAGTAGTCTTTT 59.605 37.037 0.00 0.00 0.00 2.27
8147 8907 6.888632 TCACTTATACGAAGGGAGTAGTCTTT 59.111 38.462 0.00 0.00 0.00 2.52
8148 8908 6.421485 TCACTTATACGAAGGGAGTAGTCTT 58.579 40.000 0.00 0.00 0.00 3.01
8149 8909 5.999044 TCACTTATACGAAGGGAGTAGTCT 58.001 41.667 0.00 0.00 0.00 3.24
8150 8910 6.880942 ATCACTTATACGAAGGGAGTAGTC 57.119 41.667 0.00 0.00 32.52 2.59
8151 8911 6.017275 CGAATCACTTATACGAAGGGAGTAGT 60.017 42.308 0.00 0.00 32.52 2.73
8152 8912 6.204301 TCGAATCACTTATACGAAGGGAGTAG 59.796 42.308 0.00 0.00 32.52 2.57
8153 8913 6.017605 GTCGAATCACTTATACGAAGGGAGTA 60.018 42.308 0.00 0.00 32.52 2.59
8154 8914 4.885907 TCGAATCACTTATACGAAGGGAGT 59.114 41.667 0.00 0.00 32.52 3.85
8155 8915 5.008811 AGTCGAATCACTTATACGAAGGGAG 59.991 44.000 0.00 0.00 32.52 4.30
8156 8916 4.885907 AGTCGAATCACTTATACGAAGGGA 59.114 41.667 0.00 0.00 34.91 4.20
8157 8917 5.184340 AGTCGAATCACTTATACGAAGGG 57.816 43.478 0.00 0.00 34.91 3.95
8158 8918 6.530534 ACAAAGTCGAATCACTTATACGAAGG 59.469 38.462 0.00 0.00 35.45 3.46
8159 8919 7.507672 ACAAAGTCGAATCACTTATACGAAG 57.492 36.000 0.00 0.00 35.45 3.79
8160 8920 8.239314 AGTACAAAGTCGAATCACTTATACGAA 58.761 33.333 0.00 0.00 35.45 3.85
8161 8921 7.755591 AGTACAAAGTCGAATCACTTATACGA 58.244 34.615 0.00 0.00 35.45 3.43
8162 8922 7.966157 AGTACAAAGTCGAATCACTTATACG 57.034 36.000 0.00 0.00 35.45 3.06
8167 8927 9.878599 CAAAATTAGTACAAAGTCGAATCACTT 57.121 29.630 0.00 0.00 38.30 3.16
8168 8928 9.052759 ACAAAATTAGTACAAAGTCGAATCACT 57.947 29.630 0.00 0.00 0.00 3.41
8190 8950 9.695526 TCGACTTTGTACTAGCTTTAATACAAA 57.304 29.630 16.84 16.84 42.36 2.83
8191 8951 9.350357 CTCGACTTTGTACTAGCTTTAATACAA 57.650 33.333 0.00 0.00 36.11 2.41
8192 8952 8.517878 ACTCGACTTTGTACTAGCTTTAATACA 58.482 33.333 0.00 0.00 0.00 2.29
8193 8953 8.908172 ACTCGACTTTGTACTAGCTTTAATAC 57.092 34.615 0.00 0.00 0.00 1.89
8194 8954 8.733458 TGACTCGACTTTGTACTAGCTTTAATA 58.267 33.333 0.00 0.00 0.00 0.98
8195 8955 7.541437 GTGACTCGACTTTGTACTAGCTTTAAT 59.459 37.037 0.00 0.00 0.00 1.40
8196 8956 6.860023 GTGACTCGACTTTGTACTAGCTTTAA 59.140 38.462 0.00 0.00 0.00 1.52
8197 8957 6.206243 AGTGACTCGACTTTGTACTAGCTTTA 59.794 38.462 0.00 0.00 0.00 1.85
8198 8958 5.009811 AGTGACTCGACTTTGTACTAGCTTT 59.990 40.000 0.00 0.00 0.00 3.51
8199 8959 4.519730 AGTGACTCGACTTTGTACTAGCTT 59.480 41.667 0.00 0.00 0.00 3.74
8200 8960 4.073549 AGTGACTCGACTTTGTACTAGCT 58.926 43.478 0.00 0.00 0.00 3.32
8201 8961 4.422546 AGTGACTCGACTTTGTACTAGC 57.577 45.455 0.00 0.00 0.00 3.42
8202 8962 8.967552 AAATAAGTGACTCGACTTTGTACTAG 57.032 34.615 0.00 0.00 37.38 2.57
8203 8963 9.188588 CAAAATAAGTGACTCGACTTTGTACTA 57.811 33.333 0.00 0.00 37.38 1.82
8204 8964 7.170998 CCAAAATAAGTGACTCGACTTTGTACT 59.829 37.037 0.00 0.00 37.38 2.73
8205 8965 7.288672 CCAAAATAAGTGACTCGACTTTGTAC 58.711 38.462 0.00 0.00 37.38 2.90
8206 8966 6.425721 CCCAAAATAAGTGACTCGACTTTGTA 59.574 38.462 0.00 0.00 37.38 2.41
8207 8967 5.238650 CCCAAAATAAGTGACTCGACTTTGT 59.761 40.000 0.00 0.00 37.38 2.83
8208 8968 5.468746 TCCCAAAATAAGTGACTCGACTTTG 59.531 40.000 0.00 0.00 37.38 2.77
8209 8969 5.617252 TCCCAAAATAAGTGACTCGACTTT 58.383 37.500 0.00 0.00 37.38 2.66
8210 8970 5.223449 TCCCAAAATAAGTGACTCGACTT 57.777 39.130 0.00 0.00 39.54 3.01
8211 8971 4.884668 TCCCAAAATAAGTGACTCGACT 57.115 40.909 0.00 0.00 0.00 4.18
8212 8972 4.332819 CCATCCCAAAATAAGTGACTCGAC 59.667 45.833 0.00 0.00 0.00 4.20
8213 8973 4.224147 TCCATCCCAAAATAAGTGACTCGA 59.776 41.667 0.00 0.00 0.00 4.04
8214 8974 4.513442 TCCATCCCAAAATAAGTGACTCG 58.487 43.478 0.00 0.00 0.00 4.18
8215 8975 5.745227 TCTCCATCCCAAAATAAGTGACTC 58.255 41.667 0.00 0.00 0.00 3.36
8216 8976 5.488919 TCTCTCCATCCCAAAATAAGTGACT 59.511 40.000 0.00 0.00 0.00 3.41
8217 8977 5.745227 TCTCTCCATCCCAAAATAAGTGAC 58.255 41.667 0.00 0.00 0.00 3.67
8218 8978 5.488919 ACTCTCTCCATCCCAAAATAAGTGA 59.511 40.000 0.00 0.00 0.00 3.41
8219 8979 5.749462 ACTCTCTCCATCCCAAAATAAGTG 58.251 41.667 0.00 0.00 0.00 3.16
8220 8980 7.698163 ATACTCTCTCCATCCCAAAATAAGT 57.302 36.000 0.00 0.00 0.00 2.24
8221 8981 8.986929 AAATACTCTCTCCATCCCAAAATAAG 57.013 34.615 0.00 0.00 0.00 1.73
8223 8983 8.660435 CCTAAATACTCTCTCCATCCCAAAATA 58.340 37.037 0.00 0.00 0.00 1.40
8224 8984 7.350921 TCCTAAATACTCTCTCCATCCCAAAAT 59.649 37.037 0.00 0.00 0.00 1.82
8225 8985 6.676632 TCCTAAATACTCTCTCCATCCCAAAA 59.323 38.462 0.00 0.00 0.00 2.44
8226 8986 6.209774 TCCTAAATACTCTCTCCATCCCAAA 58.790 40.000 0.00 0.00 0.00 3.28
8227 8987 5.788430 TCCTAAATACTCTCTCCATCCCAA 58.212 41.667 0.00 0.00 0.00 4.12
8228 8988 5.418692 TCCTAAATACTCTCTCCATCCCA 57.581 43.478 0.00 0.00 0.00 4.37
8229 8989 5.279056 CGTTCCTAAATACTCTCTCCATCCC 60.279 48.000 0.00 0.00 0.00 3.85
8230 8990 5.279056 CCGTTCCTAAATACTCTCTCCATCC 60.279 48.000 0.00 0.00 0.00 3.51
8231 8991 5.535406 TCCGTTCCTAAATACTCTCTCCATC 59.465 44.000 0.00 0.00 0.00 3.51
8232 8992 5.455872 TCCGTTCCTAAATACTCTCTCCAT 58.544 41.667 0.00 0.00 0.00 3.41
8233 8993 4.863548 TCCGTTCCTAAATACTCTCTCCA 58.136 43.478 0.00 0.00 0.00 3.86
8234 8994 4.278919 CCTCCGTTCCTAAATACTCTCTCC 59.721 50.000 0.00 0.00 0.00 3.71
8235 8995 4.278919 CCCTCCGTTCCTAAATACTCTCTC 59.721 50.000 0.00 0.00 0.00 3.20
8236 8996 4.079327 TCCCTCCGTTCCTAAATACTCTCT 60.079 45.833 0.00 0.00 0.00 3.10
8237 8997 4.213513 TCCCTCCGTTCCTAAATACTCTC 58.786 47.826 0.00 0.00 0.00 3.20
8238 8998 4.216708 CTCCCTCCGTTCCTAAATACTCT 58.783 47.826 0.00 0.00 0.00 3.24
8239 8999 3.959449 ACTCCCTCCGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
8240 9000 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
8241 9001 7.309683 CCTTATACTCCCTCCGTTCCTAAATAC 60.310 44.444 0.00 0.00 0.00 1.89
8242 9002 6.723052 CCTTATACTCCCTCCGTTCCTAAATA 59.277 42.308 0.00 0.00 0.00 1.40
8243 9003 5.543020 CCTTATACTCCCTCCGTTCCTAAAT 59.457 44.000 0.00 0.00 0.00 1.40
8244 9004 4.897670 CCTTATACTCCCTCCGTTCCTAAA 59.102 45.833 0.00 0.00 0.00 1.85
8245 9005 4.477249 CCTTATACTCCCTCCGTTCCTAA 58.523 47.826 0.00 0.00 0.00 2.69
8246 9006 3.753193 GCCTTATACTCCCTCCGTTCCTA 60.753 52.174 0.00 0.00 0.00 2.94
8247 9007 2.960163 CCTTATACTCCCTCCGTTCCT 58.040 52.381 0.00 0.00 0.00 3.36
8248 9008 1.343789 GCCTTATACTCCCTCCGTTCC 59.656 57.143 0.00 0.00 0.00 3.62
8249 9009 2.037144 TGCCTTATACTCCCTCCGTTC 58.963 52.381 0.00 0.00 0.00 3.95
8250 9010 2.170012 TGCCTTATACTCCCTCCGTT 57.830 50.000 0.00 0.00 0.00 4.44
8251 9011 2.249139 GATGCCTTATACTCCCTCCGT 58.751 52.381 0.00 0.00 0.00 4.69
8252 9012 1.550976 GGATGCCTTATACTCCCTCCG 59.449 57.143 0.00 0.00 0.00 4.63
8253 9013 2.303311 GTGGATGCCTTATACTCCCTCC 59.697 54.545 0.00 0.00 0.00 4.30
8318 9096 6.357367 ACTCACATAATCTAAATGTCACCCC 58.643 40.000 0.00 0.00 35.39 4.95
8320 9098 8.492673 TTGACTCACATAATCTAAATGTCACC 57.507 34.615 0.00 0.00 35.39 4.02
8372 9150 3.887716 AGCAATATTCCTGAGGCATCAAC 59.112 43.478 1.37 0.00 34.23 3.18
8470 9248 2.295692 CGCAAGCTCATCTCCTTCG 58.704 57.895 0.00 0.00 0.00 3.79
8501 9279 3.755628 GAGGTGTACGAGGCGGCA 61.756 66.667 13.08 0.00 0.00 5.69
8566 9344 1.810030 GGCTTCAACTACCGGCTCG 60.810 63.158 0.00 0.00 0.00 5.03
8619 9397 4.473520 CGGCCGGCTCAGGTTCAT 62.474 66.667 28.56 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.