Multiple sequence alignment - TraesCS4A01G050300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G050300 chr4A 100.000 4018 0 0 1 4018 41008890 41012907 0.000000e+00 7420
1 TraesCS4A01G050300 chr4A 95.219 1527 69 3 1215 2737 220005843 220004317 0.000000e+00 2412
2 TraesCS4A01G050300 chr4A 89.786 421 41 2 3109 3528 537288683 537288264 4.570000e-149 538
3 TraesCS4A01G050300 chr5A 95.210 1524 70 3 1217 2737 563851610 563853133 0.000000e+00 2407
4 TraesCS4A01G050300 chr5A 95.373 1513 67 3 1226 2735 334855599 334854087 0.000000e+00 2403
5 TraesCS4A01G050300 chr5A 94.977 1533 72 5 1210 2739 588911782 588910252 0.000000e+00 2399
6 TraesCS4A01G050300 chr6A 95.141 1523 71 3 1217 2737 384785158 384783637 0.000000e+00 2399
7 TraesCS4A01G050300 chr6A 95.007 1522 73 3 1217 2735 51774433 51772912 0.000000e+00 2386
8 TraesCS4A01G050300 chr6A 88.168 786 73 3 2742 3526 414261785 414261019 0.000000e+00 918
9 TraesCS4A01G050300 chr1A 95.076 1523 73 2 1217 2737 117686485 117684963 0.000000e+00 2396
10 TraesCS4A01G050300 chr7A 95.069 1521 73 2 1217 2736 720100815 720102334 0.000000e+00 2392
11 TraesCS4A01G050300 chr7A 94.937 79 4 0 3811 3889 684006728 684006806 1.520000e-24 124
12 TraesCS4A01G050300 chr2A 95.020 1526 71 4 1216 2737 566673459 566674983 0.000000e+00 2392
13 TraesCS4A01G050300 chr2A 82.789 796 123 9 2744 3527 691706357 691705564 0.000000e+00 699
14 TraesCS4A01G050300 chr2A 88.787 437 43 4 3093 3526 757683640 757684073 7.650000e-147 531
15 TraesCS4A01G050300 chr2A 88.889 261 21 1 961 1213 26765212 26764952 8.380000e-82 315
16 TraesCS4A01G050300 chr3D 88.799 1232 113 12 8 1216 549352957 549351728 0.000000e+00 1487
17 TraesCS4A01G050300 chr3D 89.594 788 63 8 2741 3527 402499168 402499937 0.000000e+00 983
18 TraesCS4A01G050300 chr3D 88.579 788 65 15 2739 3525 517291149 517290386 0.000000e+00 933
19 TraesCS4A01G050300 chr4D 88.780 1230 114 10 3 1213 497181065 497182289 0.000000e+00 1485
20 TraesCS4A01G050300 chr4D 84.810 1185 156 15 31 1203 248916129 248917301 0.000000e+00 1170
21 TraesCS4A01G050300 chr4D 87.925 795 66 7 2736 3525 497182288 497183057 0.000000e+00 909
22 TraesCS4A01G050300 chr7D 88.462 1222 116 11 3 1213 379770845 379772052 0.000000e+00 1452
23 TraesCS4A01G050300 chr7D 88.245 1225 124 11 8 1213 141297778 141299001 0.000000e+00 1447
24 TraesCS4A01G050300 chr7D 87.768 793 75 5 2736 3526 112011831 112012603 0.000000e+00 907
25 TraesCS4A01G050300 chr7D 86.507 793 75 12 2736 3527 379772051 379772812 0.000000e+00 843
26 TraesCS4A01G050300 chr7D 90.952 420 35 2 3107 3526 141299328 141299744 2.710000e-156 562
27 TraesCS4A01G050300 chr5D 88.221 1231 119 9 8 1216 63415838 63414612 0.000000e+00 1447
28 TraesCS4A01G050300 chr2D 88.180 1176 120 5 56 1213 517260595 517261769 0.000000e+00 1384
29 TraesCS4A01G050300 chr2D 86.528 579 61 11 2739 3307 113361831 113361260 4.410000e-174 621
30 TraesCS4A01G050300 chr2D 91.622 370 30 1 2736 3104 572644680 572645049 9.960000e-141 510
31 TraesCS4A01G050300 chr2D 91.538 130 11 0 3889 4018 306313200 306313071 3.190000e-41 180
32 TraesCS4A01G050300 chr1D 87.225 1229 114 16 5 1213 445584581 445585786 0.000000e+00 1360
33 TraesCS4A01G050300 chr1D 92.308 130 10 0 3889 4018 194910088 194910217 6.860000e-43 185
34 TraesCS4A01G050300 chr1B 88.071 1073 111 10 154 1213 121242209 121243277 0.000000e+00 1256
35 TraesCS4A01G050300 chr1B 88.176 795 65 12 2736 3528 296790900 296791667 0.000000e+00 920
36 TraesCS4A01G050300 chr1B 87.374 792 64 22 2739 3528 526619278 526618521 0.000000e+00 876
37 TraesCS4A01G050300 chr1B 85.714 182 21 5 3 180 121236088 121236268 1.910000e-43 187
38 TraesCS4A01G050300 chr1B 92.308 130 10 0 3889 4018 571070683 571070554 6.860000e-43 185
39 TraesCS4A01G050300 chr2B 83.797 790 109 12 2744 3527 655760059 655759283 0.000000e+00 732
40 TraesCS4A01G050300 chr7B 91.667 372 30 1 2739 3109 727626944 727627315 7.700000e-142 514
41 TraesCS4A01G050300 chr7B 88.321 137 15 1 3882 4018 447215761 447215896 3.210000e-36 163
42 TraesCS4A01G050300 chr6B 92.135 89 7 0 3930 4018 571081239 571081327 4.220000e-25 126


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G050300 chr4A 41008890 41012907 4017 False 7420.0 7420 100.0000 1 4018 1 chr4A.!!$F1 4017
1 TraesCS4A01G050300 chr4A 220004317 220005843 1526 True 2412.0 2412 95.2190 1215 2737 1 chr4A.!!$R1 1522
2 TraesCS4A01G050300 chr5A 563851610 563853133 1523 False 2407.0 2407 95.2100 1217 2737 1 chr5A.!!$F1 1520
3 TraesCS4A01G050300 chr5A 334854087 334855599 1512 True 2403.0 2403 95.3730 1226 2735 1 chr5A.!!$R1 1509
4 TraesCS4A01G050300 chr5A 588910252 588911782 1530 True 2399.0 2399 94.9770 1210 2739 1 chr5A.!!$R2 1529
5 TraesCS4A01G050300 chr6A 384783637 384785158 1521 True 2399.0 2399 95.1410 1217 2737 1 chr6A.!!$R2 1520
6 TraesCS4A01G050300 chr6A 51772912 51774433 1521 True 2386.0 2386 95.0070 1217 2735 1 chr6A.!!$R1 1518
7 TraesCS4A01G050300 chr6A 414261019 414261785 766 True 918.0 918 88.1680 2742 3526 1 chr6A.!!$R3 784
8 TraesCS4A01G050300 chr1A 117684963 117686485 1522 True 2396.0 2396 95.0760 1217 2737 1 chr1A.!!$R1 1520
9 TraesCS4A01G050300 chr7A 720100815 720102334 1519 False 2392.0 2392 95.0690 1217 2736 1 chr7A.!!$F2 1519
10 TraesCS4A01G050300 chr2A 566673459 566674983 1524 False 2392.0 2392 95.0200 1216 2737 1 chr2A.!!$F1 1521
11 TraesCS4A01G050300 chr2A 691705564 691706357 793 True 699.0 699 82.7890 2744 3527 1 chr2A.!!$R2 783
12 TraesCS4A01G050300 chr3D 549351728 549352957 1229 True 1487.0 1487 88.7990 8 1216 1 chr3D.!!$R2 1208
13 TraesCS4A01G050300 chr3D 402499168 402499937 769 False 983.0 983 89.5940 2741 3527 1 chr3D.!!$F1 786
14 TraesCS4A01G050300 chr3D 517290386 517291149 763 True 933.0 933 88.5790 2739 3525 1 chr3D.!!$R1 786
15 TraesCS4A01G050300 chr4D 497181065 497183057 1992 False 1197.0 1485 88.3525 3 3525 2 chr4D.!!$F2 3522
16 TraesCS4A01G050300 chr4D 248916129 248917301 1172 False 1170.0 1170 84.8100 31 1203 1 chr4D.!!$F1 1172
17 TraesCS4A01G050300 chr7D 379770845 379772812 1967 False 1147.5 1452 87.4845 3 3527 2 chr7D.!!$F3 3524
18 TraesCS4A01G050300 chr7D 141297778 141299744 1966 False 1004.5 1447 89.5985 8 3526 2 chr7D.!!$F2 3518
19 TraesCS4A01G050300 chr7D 112011831 112012603 772 False 907.0 907 87.7680 2736 3526 1 chr7D.!!$F1 790
20 TraesCS4A01G050300 chr5D 63414612 63415838 1226 True 1447.0 1447 88.2210 8 1216 1 chr5D.!!$R1 1208
21 TraesCS4A01G050300 chr2D 517260595 517261769 1174 False 1384.0 1384 88.1800 56 1213 1 chr2D.!!$F1 1157
22 TraesCS4A01G050300 chr2D 113361260 113361831 571 True 621.0 621 86.5280 2739 3307 1 chr2D.!!$R1 568
23 TraesCS4A01G050300 chr1D 445584581 445585786 1205 False 1360.0 1360 87.2250 5 1213 1 chr1D.!!$F2 1208
24 TraesCS4A01G050300 chr1B 121242209 121243277 1068 False 1256.0 1256 88.0710 154 1213 1 chr1B.!!$F2 1059
25 TraesCS4A01G050300 chr1B 296790900 296791667 767 False 920.0 920 88.1760 2736 3528 1 chr1B.!!$F3 792
26 TraesCS4A01G050300 chr1B 526618521 526619278 757 True 876.0 876 87.3740 2739 3528 1 chr1B.!!$R1 789
27 TraesCS4A01G050300 chr2B 655759283 655760059 776 True 732.0 732 83.7970 2744 3527 1 chr2B.!!$R1 783

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
659 690 0.698238 TGTATGCTGTTGGGGAGCTT 59.302 50.0 0.0 0.0 37.35 3.74 F
1057 1097 1.103398 CATCCCCGATGGCAAGTTCC 61.103 60.0 0.0 0.0 36.51 3.62 F
2376 2428 0.766674 AGGACAGTACCCAAGCACCA 60.767 55.0 0.0 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1462 1505 0.535102 CCCTGGTGAACTTCTTGCGT 60.535 55.000 0.00 0.0 0.00 5.24 R
2728 2780 1.146774 TCCAAAGGCCCACTTGATGAA 59.853 47.619 0.00 0.0 39.96 2.57 R
3917 4051 0.036010 ACATATAGGGCTGGCGCATC 60.036 55.000 10.83 0.0 38.10 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.294780 CTGCTGTGACACTCCCCTC 59.705 63.158 7.20 0.00 0.00 4.30
22 23 0.833834 CTGTGACACTCCCCTCCAGT 60.834 60.000 7.20 0.00 0.00 4.00
78 87 0.884514 GCTGCTTCTCCCTTTGTTCC 59.115 55.000 0.00 0.00 0.00 3.62
176 199 6.212589 TCCTCTGTTATGTGTTAGGTCATTCA 59.787 38.462 0.00 0.00 0.00 2.57
180 203 9.378551 TCTGTTATGTGTTAGGTCATTCAATAC 57.621 33.333 0.00 0.00 0.00 1.89
233 256 3.205338 CCGCATCATGGATGTCACTTAA 58.795 45.455 7.92 0.00 41.60 1.85
248 271 4.748102 GTCACTTAAGTTGTGGATGAACGA 59.252 41.667 5.07 0.00 36.21 3.85
266 289 4.175787 ACGAACGAAGCTTCTAGTTCAT 57.824 40.909 30.11 21.17 42.01 2.57
275 298 2.941064 GCTTCTAGTTCATGCAGCATCA 59.059 45.455 4.38 0.00 0.00 3.07
276 299 3.564644 GCTTCTAGTTCATGCAGCATCAT 59.435 43.478 4.38 0.00 0.00 2.45
380 403 4.230657 GTCCGATGTTAATCCGAGATCAG 58.769 47.826 0.00 0.00 0.00 2.90
421 444 5.643348 TGAACTACATCTACAACTGCAATGG 59.357 40.000 4.38 0.00 0.00 3.16
464 493 4.909696 TCGAATGAAAAGACCTTTTGCA 57.090 36.364 11.95 9.96 42.26 4.08
474 503 2.428834 CCTTTTGCAAGGCTGGTGA 58.571 52.632 0.00 0.00 43.55 4.02
555 586 1.638070 TGGCCATGTTCCTCCATGTTA 59.362 47.619 0.00 0.00 40.50 2.41
575 606 6.419791 TGTTATTGGTCATAATCGGAGGTTT 58.580 36.000 0.00 0.00 29.70 3.27
578 609 8.718734 GTTATTGGTCATAATCGGAGGTTTATC 58.281 37.037 0.00 0.00 29.70 1.75
659 690 0.698238 TGTATGCTGTTGGGGAGCTT 59.302 50.000 0.00 0.00 37.35 3.74
676 707 5.018809 GGAGCTTAGAGGAGAGATGATCAT 58.981 45.833 8.25 8.25 0.00 2.45
742 773 6.183361 CCAAGATGGTATCCATACTTCAAGGA 60.183 42.308 0.99 0.00 45.26 3.36
764 795 5.391310 GGAGAGCACTTGATATGTTGTTGTG 60.391 44.000 0.00 0.00 0.00 3.33
794 825 7.459795 TGCCTTGATATGTTGTTATTGTTCA 57.540 32.000 0.00 0.00 0.00 3.18
867 899 8.011844 AGCAATAGATTGTACTCATGTCACTA 57.988 34.615 4.27 0.00 39.88 2.74
905 937 6.051717 GTCACAAACTGCATCATATAGAGGT 58.948 40.000 0.00 0.00 0.00 3.85
912 944 6.556639 ACTGCATCATATAGAGGTAGGAAGA 58.443 40.000 0.00 0.00 43.71 2.87
978 1010 2.636830 AGTTCACATATGTGCTGGCTC 58.363 47.619 27.71 14.41 45.25 4.70
1057 1097 1.103398 CATCCCCGATGGCAAGTTCC 61.103 60.000 0.00 0.00 36.51 3.62
1086 1126 2.182181 TGCTGGCTATGCATGTCGC 61.182 57.895 10.16 9.10 42.89 5.19
1169 1209 2.719705 ACTATCCTAGGACTCCTCAGGG 59.280 54.545 15.42 3.30 34.61 4.45
1211 1252 5.071788 ACTCCAACCTTAGAGTGATTGTTGA 59.928 40.000 0.00 0.00 41.74 3.18
1212 1253 5.551233 TCCAACCTTAGAGTGATTGTTGAG 58.449 41.667 0.00 0.00 36.15 3.02
1213 1254 5.071788 TCCAACCTTAGAGTGATTGTTGAGT 59.928 40.000 0.00 0.00 36.15 3.41
1221 1262 6.305272 AGAGTGATTGTTGAGTGGTGATAT 57.695 37.500 0.00 0.00 0.00 1.63
1224 1265 6.240894 AGTGATTGTTGAGTGGTGATATGTT 58.759 36.000 0.00 0.00 0.00 2.71
1378 1419 1.444933 TTCTGGGCTGGAAAAGGAGA 58.555 50.000 0.00 0.00 0.00 3.71
1605 1652 6.294787 GCTATATGGAGTCTTTCGATGAGGAA 60.295 42.308 0.00 0.00 0.00 3.36
1740 1790 2.163818 GGGAAATCATCGCCATCGTA 57.836 50.000 0.00 0.00 35.03 3.43
1802 1852 2.559668 CAACATCTTCACCAGCACCATT 59.440 45.455 0.00 0.00 0.00 3.16
2122 2174 5.204409 TCTAGTGGTGTTATGTGAACGTT 57.796 39.130 0.00 0.00 0.00 3.99
2255 2307 2.507407 TGTAAGGGGCTGATTTGGAC 57.493 50.000 0.00 0.00 0.00 4.02
2263 2315 1.615392 GGCTGATTTGGACCCATATGC 59.385 52.381 0.00 0.00 0.00 3.14
2290 2342 8.041143 TCATGCTATGGTTAGGTTTACCTTAT 57.959 34.615 6.76 0.79 46.09 1.73
2342 2394 6.431234 GCAATAGAGGTTAATCATAAGTGGGG 59.569 42.308 0.00 0.00 0.00 4.96
2376 2428 0.766674 AGGACAGTACCCAAGCACCA 60.767 55.000 0.00 0.00 0.00 4.17
2458 2510 5.084519 ACCTAGCTTGACGATATTCCCATA 58.915 41.667 0.00 0.00 0.00 2.74
2472 2524 1.121407 CCCATATGTCCTCGGGAGCA 61.121 60.000 1.24 0.00 41.62 4.26
2696 2748 4.349501 GGTTCGACACTCTTACTTATCGG 58.650 47.826 0.00 0.00 0.00 4.18
2710 2762 8.099537 TCTTACTTATCGGAAGGACTACGATAT 58.900 37.037 15.16 7.98 45.47 1.63
2728 2780 6.500336 ACGATATATCCCCTATACTTGTGGT 58.500 40.000 7.15 0.00 0.00 4.16
2771 2823 5.546526 AGCTCTGAAGAACAGGTTTAAGAG 58.453 41.667 0.00 0.00 45.76 2.85
3025 3080 6.660887 TCAAACAAGGATTTGAAGCAAAAC 57.339 33.333 0.00 0.00 43.81 2.43
3030 3085 5.581874 ACAAGGATTTGAAGCAAAACAACAG 59.418 36.000 0.00 0.00 36.90 3.16
3037 3101 3.766591 TGAAGCAAAACAACAGGAGGAAA 59.233 39.130 0.00 0.00 0.00 3.13
3065 3143 3.878160 AAGAGGCAGTAGTAGAAGTGC 57.122 47.619 0.00 0.00 43.70 4.40
3079 3157 0.326264 AAGTGCGGAAGAGGAAGCAT 59.674 50.000 0.00 0.00 41.88 3.79
3092 3170 1.092348 GAAGCATCACATCAGCAGCA 58.908 50.000 0.00 0.00 0.00 4.41
3093 3171 1.064208 GAAGCATCACATCAGCAGCAG 59.936 52.381 0.00 0.00 0.00 4.24
3094 3172 0.252197 AGCATCACATCAGCAGCAGA 59.748 50.000 0.00 0.00 0.00 4.26
3095 3173 0.658368 GCATCACATCAGCAGCAGAG 59.342 55.000 0.00 0.00 0.00 3.35
3096 3174 1.300481 CATCACATCAGCAGCAGAGG 58.700 55.000 0.00 0.00 0.00 3.69
3097 3175 1.134491 CATCACATCAGCAGCAGAGGA 60.134 52.381 6.45 0.00 0.00 3.71
3098 3176 0.978907 TCACATCAGCAGCAGAGGAA 59.021 50.000 6.45 0.00 0.00 3.36
3099 3177 1.066358 TCACATCAGCAGCAGAGGAAG 60.066 52.381 6.45 0.00 0.00 3.46
3100 3178 1.066358 CACATCAGCAGCAGAGGAAGA 60.066 52.381 6.45 0.00 0.00 2.87
3101 3179 1.207570 ACATCAGCAGCAGAGGAAGAG 59.792 52.381 6.45 0.00 0.00 2.85
3102 3180 0.831966 ATCAGCAGCAGAGGAAGAGG 59.168 55.000 0.00 0.00 0.00 3.69
3103 3181 0.251967 TCAGCAGCAGAGGAAGAGGA 60.252 55.000 0.00 0.00 0.00 3.71
3104 3182 0.612229 CAGCAGCAGAGGAAGAGGAA 59.388 55.000 0.00 0.00 0.00 3.36
3105 3183 1.002888 CAGCAGCAGAGGAAGAGGAAA 59.997 52.381 0.00 0.00 0.00 3.13
3106 3184 1.701847 AGCAGCAGAGGAAGAGGAAAA 59.298 47.619 0.00 0.00 0.00 2.29
3107 3185 2.083002 GCAGCAGAGGAAGAGGAAAAG 58.917 52.381 0.00 0.00 0.00 2.27
3108 3186 2.709213 CAGCAGAGGAAGAGGAAAAGG 58.291 52.381 0.00 0.00 0.00 3.11
3109 3187 2.304180 CAGCAGAGGAAGAGGAAAAGGA 59.696 50.000 0.00 0.00 0.00 3.36
3110 3188 2.982488 AGCAGAGGAAGAGGAAAAGGAA 59.018 45.455 0.00 0.00 0.00 3.36
3111 3189 3.008923 AGCAGAGGAAGAGGAAAAGGAAG 59.991 47.826 0.00 0.00 0.00 3.46
3112 3190 3.008485 GCAGAGGAAGAGGAAAAGGAAGA 59.992 47.826 0.00 0.00 0.00 2.87
3113 3191 4.831107 CAGAGGAAGAGGAAAAGGAAGAG 58.169 47.826 0.00 0.00 0.00 2.85
3114 3192 3.843619 AGAGGAAGAGGAAAAGGAAGAGG 59.156 47.826 0.00 0.00 0.00 3.69
3115 3193 3.841255 GAGGAAGAGGAAAAGGAAGAGGA 59.159 47.826 0.00 0.00 0.00 3.71
3199 3319 8.997621 TGTTGGCTCTTAATAACTTGTACTAG 57.002 34.615 2.56 2.56 0.00 2.57
3274 3401 4.887071 ACAATGTTCAGTGTGTGTGGTAAT 59.113 37.500 5.12 0.00 0.00 1.89
3398 3525 3.776969 TGACTAGTTGATTCCCTCATGCT 59.223 43.478 0.00 0.00 32.72 3.79
3466 3599 1.474332 CCTGCATTTGCCCAACCAGT 61.474 55.000 0.00 0.00 41.18 4.00
3515 3649 5.191722 TGCCCTAAAATAGAGATGTGAACCT 59.808 40.000 0.00 0.00 0.00 3.50
3528 3662 2.104451 TGTGAACCTAACACGCCCTAAA 59.896 45.455 0.00 0.00 40.61 1.85
3529 3663 2.740447 GTGAACCTAACACGCCCTAAAG 59.260 50.000 0.00 0.00 0.00 1.85
3530 3664 2.289819 TGAACCTAACACGCCCTAAAGG 60.290 50.000 0.00 0.00 39.47 3.11
3531 3665 1.648116 ACCTAACACGCCCTAAAGGA 58.352 50.000 0.00 0.00 38.24 3.36
3532 3666 1.980036 ACCTAACACGCCCTAAAGGAA 59.020 47.619 0.00 0.00 38.24 3.36
3533 3667 2.027469 ACCTAACACGCCCTAAAGGAAG 60.027 50.000 0.00 0.00 38.24 3.46
3534 3668 2.027469 CCTAACACGCCCTAAAGGAAGT 60.027 50.000 0.00 0.00 38.24 3.01
3535 3669 1.892209 AACACGCCCTAAAGGAAGTG 58.108 50.000 16.85 16.85 43.17 3.16
3536 3670 0.036306 ACACGCCCTAAAGGAAGTGG 59.964 55.000 20.24 8.84 42.44 4.00
3537 3671 0.676782 CACGCCCTAAAGGAAGTGGG 60.677 60.000 12.90 0.00 42.41 4.61
3538 3672 0.838987 ACGCCCTAAAGGAAGTGGGA 60.839 55.000 0.00 0.00 42.11 4.37
3539 3673 0.546598 CGCCCTAAAGGAAGTGGGAT 59.453 55.000 0.00 0.00 42.11 3.85
3540 3674 1.747206 CGCCCTAAAGGAAGTGGGATG 60.747 57.143 0.00 0.00 42.11 3.51
3541 3675 1.410224 GCCCTAAAGGAAGTGGGATGG 60.410 57.143 0.00 0.00 42.11 3.51
3542 3676 2.205342 CCCTAAAGGAAGTGGGATGGA 58.795 52.381 0.00 0.00 42.11 3.41
3543 3677 2.580783 CCCTAAAGGAAGTGGGATGGAA 59.419 50.000 0.00 0.00 42.11 3.53
3544 3678 3.372025 CCCTAAAGGAAGTGGGATGGAAG 60.372 52.174 0.00 0.00 42.11 3.46
3545 3679 2.907458 AAAGGAAGTGGGATGGAAGG 57.093 50.000 0.00 0.00 0.00 3.46
3546 3680 2.059756 AAGGAAGTGGGATGGAAGGA 57.940 50.000 0.00 0.00 0.00 3.36
3547 3681 2.059756 AGGAAGTGGGATGGAAGGAA 57.940 50.000 0.00 0.00 0.00 3.36
3548 3682 1.918957 AGGAAGTGGGATGGAAGGAAG 59.081 52.381 0.00 0.00 0.00 3.46
3549 3683 1.916181 GGAAGTGGGATGGAAGGAAGA 59.084 52.381 0.00 0.00 0.00 2.87
3550 3684 2.308866 GGAAGTGGGATGGAAGGAAGAA 59.691 50.000 0.00 0.00 0.00 2.52
3551 3685 3.615155 GAAGTGGGATGGAAGGAAGAAG 58.385 50.000 0.00 0.00 0.00 2.85
3552 3686 2.921221 AGTGGGATGGAAGGAAGAAGA 58.079 47.619 0.00 0.00 0.00 2.87
3553 3687 3.468850 AGTGGGATGGAAGGAAGAAGAT 58.531 45.455 0.00 0.00 0.00 2.40
3554 3688 3.457749 AGTGGGATGGAAGGAAGAAGATC 59.542 47.826 0.00 0.00 0.00 2.75
3555 3689 2.435805 TGGGATGGAAGGAAGAAGATCG 59.564 50.000 0.00 0.00 0.00 3.69
3556 3690 2.700897 GGGATGGAAGGAAGAAGATCGA 59.299 50.000 0.00 0.00 0.00 3.59
3557 3691 3.244044 GGGATGGAAGGAAGAAGATCGAG 60.244 52.174 0.00 0.00 0.00 4.04
3558 3692 2.969628 TGGAAGGAAGAAGATCGAGC 57.030 50.000 0.00 0.00 0.00 5.03
3559 3693 1.135139 TGGAAGGAAGAAGATCGAGCG 59.865 52.381 0.00 0.00 0.00 5.03
3560 3694 1.204792 GAAGGAAGAAGATCGAGCGC 58.795 55.000 0.00 0.00 0.00 5.92
3561 3695 0.532573 AAGGAAGAAGATCGAGCGCA 59.467 50.000 11.47 0.00 0.00 6.09
3562 3696 0.532573 AGGAAGAAGATCGAGCGCAA 59.467 50.000 11.47 0.00 0.00 4.85
3563 3697 1.137872 AGGAAGAAGATCGAGCGCAAT 59.862 47.619 11.47 0.00 0.00 3.56
3564 3698 1.260033 GGAAGAAGATCGAGCGCAATG 59.740 52.381 11.47 0.00 0.00 2.82
3565 3699 1.929836 GAAGAAGATCGAGCGCAATGT 59.070 47.619 11.47 0.00 0.00 2.71
3566 3700 2.871182 AGAAGATCGAGCGCAATGTA 57.129 45.000 11.47 0.00 0.00 2.29
3567 3701 2.736978 AGAAGATCGAGCGCAATGTAG 58.263 47.619 11.47 0.00 0.00 2.74
3568 3702 1.789464 GAAGATCGAGCGCAATGTAGG 59.211 52.381 11.47 0.00 0.00 3.18
3569 3703 0.598680 AGATCGAGCGCAATGTAGGC 60.599 55.000 11.47 0.00 0.00 3.93
3577 3711 2.979130 GCAATGTAGGCGAGGAGAC 58.021 57.895 0.00 0.00 0.00 3.36
3579 3713 1.681793 GCAATGTAGGCGAGGAGACTA 59.318 52.381 0.00 0.00 44.43 2.59
3580 3714 2.297597 GCAATGTAGGCGAGGAGACTAT 59.702 50.000 0.00 0.00 43.52 2.12
3581 3715 3.858877 GCAATGTAGGCGAGGAGACTATG 60.859 52.174 0.00 0.00 43.52 2.23
3582 3716 3.510531 ATGTAGGCGAGGAGACTATGA 57.489 47.619 0.00 0.00 43.52 2.15
3583 3717 2.573369 TGTAGGCGAGGAGACTATGAC 58.427 52.381 0.00 0.00 43.52 3.06
3584 3718 2.172930 TGTAGGCGAGGAGACTATGACT 59.827 50.000 0.00 0.00 43.52 3.41
3585 3719 3.390311 TGTAGGCGAGGAGACTATGACTA 59.610 47.826 0.00 0.00 43.52 2.59
3586 3720 3.134574 AGGCGAGGAGACTATGACTAG 57.865 52.381 0.00 0.00 44.43 2.57
3587 3721 2.156098 GGCGAGGAGACTATGACTAGG 58.844 57.143 0.00 0.00 44.43 3.02
3588 3722 2.156098 GCGAGGAGACTATGACTAGGG 58.844 57.143 0.00 0.00 44.43 3.53
3589 3723 2.224572 GCGAGGAGACTATGACTAGGGA 60.225 54.545 0.00 0.00 44.43 4.20
3590 3724 3.404899 CGAGGAGACTATGACTAGGGAC 58.595 54.545 0.00 0.00 44.43 4.46
3591 3725 3.758425 GAGGAGACTATGACTAGGGACC 58.242 54.545 0.00 0.00 44.43 4.46
3592 3726 2.106857 AGGAGACTATGACTAGGGACCG 59.893 54.545 0.00 0.00 40.61 4.79
3593 3727 2.506444 GAGACTATGACTAGGGACCGG 58.494 57.143 0.00 0.00 0.00 5.28
3594 3728 2.106166 GAGACTATGACTAGGGACCGGA 59.894 54.545 9.46 0.00 0.00 5.14
3595 3729 2.158638 AGACTATGACTAGGGACCGGAC 60.159 54.545 9.46 0.00 0.00 4.79
3596 3730 1.851653 ACTATGACTAGGGACCGGACT 59.148 52.381 9.46 5.81 0.00 3.85
3597 3731 3.051581 ACTATGACTAGGGACCGGACTA 58.948 50.000 9.46 6.79 0.00 2.59
3598 3732 2.361643 ATGACTAGGGACCGGACTAC 57.638 55.000 9.46 0.00 0.00 2.73
3599 3733 0.257039 TGACTAGGGACCGGACTACC 59.743 60.000 9.46 4.18 0.00 3.18
3609 3743 3.152400 GGACTACCGGCGTCCCAT 61.152 66.667 25.65 0.00 44.08 4.00
3610 3744 2.728435 GGACTACCGGCGTCCCATT 61.728 63.158 25.65 0.00 44.08 3.16
3611 3745 1.520787 GACTACCGGCGTCCCATTG 60.521 63.158 12.25 0.00 0.00 2.82
3612 3746 2.234913 GACTACCGGCGTCCCATTGT 62.235 60.000 12.25 0.00 0.00 2.71
3613 3747 0.971959 ACTACCGGCGTCCCATTGTA 60.972 55.000 6.01 0.00 0.00 2.41
3614 3748 0.529119 CTACCGGCGTCCCATTGTAC 60.529 60.000 6.01 0.00 0.00 2.90
3615 3749 1.256361 TACCGGCGTCCCATTGTACA 61.256 55.000 6.01 0.00 0.00 2.90
3616 3750 1.813753 CCGGCGTCCCATTGTACAG 60.814 63.158 6.01 0.00 0.00 2.74
3617 3751 2.461110 CGGCGTCCCATTGTACAGC 61.461 63.158 0.00 0.00 0.00 4.40
3618 3752 1.078426 GGCGTCCCATTGTACAGCT 60.078 57.895 0.00 0.00 0.00 4.24
3619 3753 1.369091 GGCGTCCCATTGTACAGCTG 61.369 60.000 13.48 13.48 0.00 4.24
3620 3754 1.982073 GCGTCCCATTGTACAGCTGC 61.982 60.000 15.27 0.00 0.00 5.25
3621 3755 0.673333 CGTCCCATTGTACAGCTGCA 60.673 55.000 15.27 0.00 0.00 4.41
3622 3756 1.755179 GTCCCATTGTACAGCTGCAT 58.245 50.000 15.27 0.00 0.00 3.96
3623 3757 2.094675 GTCCCATTGTACAGCTGCATT 58.905 47.619 15.27 0.00 0.00 3.56
3624 3758 2.093890 TCCCATTGTACAGCTGCATTG 58.906 47.619 15.27 10.89 0.00 2.82
3625 3759 1.820519 CCCATTGTACAGCTGCATTGT 59.179 47.619 15.27 8.77 0.00 2.71
3626 3760 2.159338 CCCATTGTACAGCTGCATTGTC 60.159 50.000 15.27 0.00 0.00 3.18
3627 3761 2.476686 CCATTGTACAGCTGCATTGTCG 60.477 50.000 15.27 0.00 0.00 4.35
3628 3762 0.516877 TTGTACAGCTGCATTGTCGC 59.483 50.000 15.27 0.00 0.00 5.19
3629 3763 0.602372 TGTACAGCTGCATTGTCGCA 60.602 50.000 15.27 6.09 40.32 5.10
3630 3764 0.516877 GTACAGCTGCATTGTCGCAA 59.483 50.000 15.27 0.00 42.45 4.85
3631 3765 0.516877 TACAGCTGCATTGTCGCAAC 59.483 50.000 15.27 0.00 42.45 4.17
3632 3766 1.443194 CAGCTGCATTGTCGCAACC 60.443 57.895 0.00 0.00 42.45 3.77
3633 3767 1.601759 AGCTGCATTGTCGCAACCT 60.602 52.632 1.02 0.00 42.45 3.50
3634 3768 0.321564 AGCTGCATTGTCGCAACCTA 60.322 50.000 1.02 0.00 42.45 3.08
3635 3769 0.734889 GCTGCATTGTCGCAACCTAT 59.265 50.000 0.00 0.00 42.45 2.57
3636 3770 1.939934 GCTGCATTGTCGCAACCTATA 59.060 47.619 0.00 0.00 42.45 1.31
3637 3771 2.032549 GCTGCATTGTCGCAACCTATAG 60.033 50.000 0.00 0.00 42.45 1.31
3638 3772 2.545526 CTGCATTGTCGCAACCTATAGG 59.454 50.000 17.73 17.73 42.45 2.57
3639 3773 2.169561 TGCATTGTCGCAACCTATAGGA 59.830 45.455 26.01 0.00 39.45 2.94
3640 3774 3.181455 TGCATTGTCGCAACCTATAGGAT 60.181 43.478 26.01 11.18 39.45 3.24
3641 3775 3.815401 GCATTGTCGCAACCTATAGGATT 59.185 43.478 26.01 12.57 38.94 3.01
3642 3776 4.319766 GCATTGTCGCAACCTATAGGATTG 60.320 45.833 26.01 22.79 38.94 2.67
3643 3777 4.481368 TTGTCGCAACCTATAGGATTGT 57.519 40.909 26.01 0.00 38.94 2.71
3644 3778 3.792401 TGTCGCAACCTATAGGATTGTG 58.208 45.455 26.01 25.87 37.70 3.33
3645 3779 3.449377 TGTCGCAACCTATAGGATTGTGA 59.551 43.478 28.02 28.02 40.20 3.58
3646 3780 4.100963 TGTCGCAACCTATAGGATTGTGAT 59.899 41.667 30.96 10.41 42.12 3.06
3647 3781 4.686554 GTCGCAACCTATAGGATTGTGATC 59.313 45.833 30.96 24.67 42.12 2.92
3659 3793 4.542662 GATTGTGATCCTTTCATCGTGG 57.457 45.455 0.00 0.00 36.54 4.94
3660 3794 2.401583 TGTGATCCTTTCATCGTGGG 57.598 50.000 0.00 0.00 36.54 4.61
3661 3795 1.905894 TGTGATCCTTTCATCGTGGGA 59.094 47.619 0.00 0.00 36.54 4.37
3662 3796 2.505407 TGTGATCCTTTCATCGTGGGAT 59.495 45.455 0.00 0.00 40.77 3.85
3663 3797 3.054434 TGTGATCCTTTCATCGTGGGATT 60.054 43.478 0.00 0.00 38.52 3.01
3664 3798 4.163268 TGTGATCCTTTCATCGTGGGATTA 59.837 41.667 0.00 0.00 38.52 1.75
3665 3799 4.752101 GTGATCCTTTCATCGTGGGATTAG 59.248 45.833 0.00 0.00 38.52 1.73
3666 3800 4.653801 TGATCCTTTCATCGTGGGATTAGA 59.346 41.667 0.00 0.00 38.52 2.10
3667 3801 5.130311 TGATCCTTTCATCGTGGGATTAGAA 59.870 40.000 0.00 0.00 38.52 2.10
3668 3802 4.766375 TCCTTTCATCGTGGGATTAGAAC 58.234 43.478 0.00 0.00 0.00 3.01
3669 3803 4.469945 TCCTTTCATCGTGGGATTAGAACT 59.530 41.667 0.00 0.00 0.00 3.01
3670 3804 5.659525 TCCTTTCATCGTGGGATTAGAACTA 59.340 40.000 0.00 0.00 0.00 2.24
3671 3805 6.155565 TCCTTTCATCGTGGGATTAGAACTAA 59.844 38.462 0.00 0.00 0.00 2.24
3672 3806 6.992715 CCTTTCATCGTGGGATTAGAACTAAT 59.007 38.462 6.76 6.76 38.38 1.73
3673 3807 8.148351 CCTTTCATCGTGGGATTAGAACTAATA 58.852 37.037 7.00 0.00 36.02 0.98
3674 3808 9.197694 CTTTCATCGTGGGATTAGAACTAATAG 57.802 37.037 7.00 0.00 36.02 1.73
3675 3809 7.834881 TCATCGTGGGATTAGAACTAATAGT 57.165 36.000 7.00 0.00 36.02 2.12
3676 3810 7.883217 TCATCGTGGGATTAGAACTAATAGTC 58.117 38.462 7.00 0.00 36.02 2.59
3677 3811 7.724506 TCATCGTGGGATTAGAACTAATAGTCT 59.275 37.037 7.00 0.00 36.02 3.24
3678 3812 7.893124 TCGTGGGATTAGAACTAATAGTCTT 57.107 36.000 7.00 0.00 36.02 3.01
3679 3813 7.713750 TCGTGGGATTAGAACTAATAGTCTTG 58.286 38.462 7.00 0.00 36.02 3.02
3680 3814 6.421202 CGTGGGATTAGAACTAATAGTCTTGC 59.579 42.308 7.00 0.00 36.02 4.01
3681 3815 7.501844 GTGGGATTAGAACTAATAGTCTTGCT 58.498 38.462 7.00 0.00 36.02 3.91
3682 3816 8.639761 GTGGGATTAGAACTAATAGTCTTGCTA 58.360 37.037 7.00 0.00 36.02 3.49
3683 3817 8.639761 TGGGATTAGAACTAATAGTCTTGCTAC 58.360 37.037 7.00 0.00 36.02 3.58
3684 3818 8.639761 GGGATTAGAACTAATAGTCTTGCTACA 58.360 37.037 7.00 0.00 36.02 2.74
3689 3823 7.644490 AGAACTAATAGTCTTGCTACATCTCG 58.356 38.462 0.00 0.00 31.59 4.04
3690 3824 6.320494 ACTAATAGTCTTGCTACATCTCGG 57.680 41.667 0.00 0.00 31.59 4.63
3691 3825 5.828859 ACTAATAGTCTTGCTACATCTCGGT 59.171 40.000 0.00 0.00 31.59 4.69
3692 3826 4.839668 ATAGTCTTGCTACATCTCGGTC 57.160 45.455 0.00 0.00 31.59 4.79
3693 3827 2.447443 AGTCTTGCTACATCTCGGTCA 58.553 47.619 0.00 0.00 0.00 4.02
3694 3828 2.826128 AGTCTTGCTACATCTCGGTCAA 59.174 45.455 0.00 0.00 0.00 3.18
3695 3829 3.449018 AGTCTTGCTACATCTCGGTCAAT 59.551 43.478 0.00 0.00 0.00 2.57
3696 3830 4.645136 AGTCTTGCTACATCTCGGTCAATA 59.355 41.667 0.00 0.00 0.00 1.90
3697 3831 4.979197 GTCTTGCTACATCTCGGTCAATAG 59.021 45.833 0.00 0.00 0.00 1.73
3698 3832 4.645136 TCTTGCTACATCTCGGTCAATAGT 59.355 41.667 0.00 0.00 0.00 2.12
3699 3833 4.569761 TGCTACATCTCGGTCAATAGTC 57.430 45.455 0.00 0.00 0.00 2.59
3700 3834 3.003378 TGCTACATCTCGGTCAATAGTCG 59.997 47.826 0.00 0.00 0.00 4.18
3701 3835 3.250280 GCTACATCTCGGTCAATAGTCGA 59.750 47.826 0.00 0.00 0.00 4.20
3702 3836 4.083217 GCTACATCTCGGTCAATAGTCGAT 60.083 45.833 0.00 0.00 32.32 3.59
3703 3837 4.230314 ACATCTCGGTCAATAGTCGATG 57.770 45.455 0.00 0.00 34.52 3.84
3704 3838 2.776312 TCTCGGTCAATAGTCGATGC 57.224 50.000 0.00 0.00 32.32 3.91
3705 3839 2.298610 TCTCGGTCAATAGTCGATGCT 58.701 47.619 0.00 0.00 32.32 3.79
3706 3840 3.473625 TCTCGGTCAATAGTCGATGCTA 58.526 45.455 0.00 0.00 32.32 3.49
3707 3841 4.072839 TCTCGGTCAATAGTCGATGCTAT 58.927 43.478 0.00 0.00 33.45 2.97
3708 3842 5.243207 TCTCGGTCAATAGTCGATGCTATA 58.757 41.667 0.00 0.00 31.94 1.31
3709 3843 5.880887 TCTCGGTCAATAGTCGATGCTATAT 59.119 40.000 0.00 0.00 31.94 0.86
3710 3844 6.374613 TCTCGGTCAATAGTCGATGCTATATT 59.625 38.462 0.00 0.00 31.94 1.28
3711 3845 6.552629 TCGGTCAATAGTCGATGCTATATTC 58.447 40.000 0.00 0.00 31.94 1.75
3712 3846 6.150474 TCGGTCAATAGTCGATGCTATATTCA 59.850 38.462 0.00 0.00 31.94 2.57
3713 3847 6.975197 CGGTCAATAGTCGATGCTATATTCAT 59.025 38.462 0.00 0.00 31.94 2.57
3714 3848 7.043788 CGGTCAATAGTCGATGCTATATTCATG 60.044 40.741 0.00 0.00 31.94 3.07
3715 3849 7.976175 GGTCAATAGTCGATGCTATATTCATGA 59.024 37.037 0.00 0.00 31.94 3.07
3716 3850 9.018716 GTCAATAGTCGATGCTATATTCATGAG 57.981 37.037 0.00 0.00 31.94 2.90
3717 3851 8.960591 TCAATAGTCGATGCTATATTCATGAGA 58.039 33.333 0.00 0.00 31.94 3.27
3718 3852 9.747293 CAATAGTCGATGCTATATTCATGAGAT 57.253 33.333 0.00 0.00 31.94 2.75
3722 3856 8.933807 AGTCGATGCTATATTCATGAGATTTTG 58.066 33.333 0.00 0.00 0.00 2.44
3723 3857 7.691463 GTCGATGCTATATTCATGAGATTTTGC 59.309 37.037 0.00 0.00 0.00 3.68
3724 3858 7.388500 TCGATGCTATATTCATGAGATTTTGCA 59.612 33.333 11.61 11.61 0.00 4.08
3725 3859 8.182227 CGATGCTATATTCATGAGATTTTGCAT 58.818 33.333 17.60 17.60 38.67 3.96
3726 3860 9.504710 GATGCTATATTCATGAGATTTTGCATC 57.495 33.333 22.80 22.80 42.78 3.91
3727 3861 8.398878 TGCTATATTCATGAGATTTTGCATCA 57.601 30.769 0.00 0.00 0.00 3.07
3728 3862 8.852135 TGCTATATTCATGAGATTTTGCATCAA 58.148 29.630 0.00 0.00 0.00 2.57
3729 3863 9.343103 GCTATATTCATGAGATTTTGCATCAAG 57.657 33.333 0.00 0.00 0.00 3.02
3734 3868 8.474006 TTCATGAGATTTTGCATCAAGATTTG 57.526 30.769 0.00 0.00 0.00 2.32
3735 3869 7.608153 TCATGAGATTTTGCATCAAGATTTGT 58.392 30.769 0.00 0.00 0.00 2.83
3736 3870 7.544217 TCATGAGATTTTGCATCAAGATTTGTG 59.456 33.333 0.00 0.00 0.00 3.33
3737 3871 5.636121 TGAGATTTTGCATCAAGATTTGTGC 59.364 36.000 0.00 8.44 37.83 4.57
3738 3872 5.543714 AGATTTTGCATCAAGATTTGTGCA 58.456 33.333 11.96 11.96 41.98 4.57
3739 3873 5.992829 AGATTTTGCATCAAGATTTGTGCAA 59.007 32.000 18.63 18.63 46.04 4.08
3740 3874 6.653320 AGATTTTGCATCAAGATTTGTGCAAT 59.347 30.769 20.99 13.47 46.45 3.56
3741 3875 6.621316 TTTTGCATCAAGATTTGTGCAATT 57.379 29.167 20.99 0.00 46.45 2.32
3742 3876 6.621316 TTTGCATCAAGATTTGTGCAATTT 57.379 29.167 20.99 0.00 46.45 1.82
3743 3877 6.621316 TTGCATCAAGATTTGTGCAATTTT 57.379 29.167 18.63 0.00 44.56 1.82
3744 3878 6.230849 TGCATCAAGATTTGTGCAATTTTC 57.769 33.333 12.97 0.00 41.32 2.29
3745 3879 5.992829 TGCATCAAGATTTGTGCAATTTTCT 59.007 32.000 12.97 0.00 41.32 2.52
3746 3880 6.483974 TGCATCAAGATTTGTGCAATTTTCTT 59.516 30.769 12.97 0.00 41.32 2.52
3747 3881 7.012515 TGCATCAAGATTTGTGCAATTTTCTTT 59.987 29.630 12.97 0.00 41.32 2.52
3748 3882 7.858879 GCATCAAGATTTGTGCAATTTTCTTTT 59.141 29.630 0.00 0.00 37.51 2.27
3749 3883 9.724839 CATCAAGATTTGTGCAATTTTCTTTTT 57.275 25.926 0.00 0.00 0.00 1.94
3836 3970 3.795688 ATGATCATCATGGGGTGTACC 57.204 47.619 1.18 0.00 35.43 3.34
3849 3983 3.793797 GGTGTACCCAACCAAATATGC 57.206 47.619 0.00 0.00 37.65 3.14
3850 3984 2.429250 GGTGTACCCAACCAAATATGCC 59.571 50.000 0.00 0.00 37.65 4.40
3851 3985 3.361786 GTGTACCCAACCAAATATGCCT 58.638 45.455 0.00 0.00 0.00 4.75
3852 3986 3.380320 GTGTACCCAACCAAATATGCCTC 59.620 47.826 0.00 0.00 0.00 4.70
3853 3987 2.159179 ACCCAACCAAATATGCCTCC 57.841 50.000 0.00 0.00 0.00 4.30
3854 3988 1.342975 ACCCAACCAAATATGCCTCCC 60.343 52.381 0.00 0.00 0.00 4.30
3855 3989 1.413118 CCAACCAAATATGCCTCCCC 58.587 55.000 0.00 0.00 0.00 4.81
3856 3990 1.062962 CCAACCAAATATGCCTCCCCT 60.063 52.381 0.00 0.00 0.00 4.79
3857 3991 2.034124 CAACCAAATATGCCTCCCCTG 58.966 52.381 0.00 0.00 0.00 4.45
3858 3992 1.607225 ACCAAATATGCCTCCCCTGA 58.393 50.000 0.00 0.00 0.00 3.86
3859 3993 1.496429 ACCAAATATGCCTCCCCTGAG 59.504 52.381 0.00 0.00 38.42 3.35
3873 4007 5.265989 CTCCCCTGAGGTAGAATAGTATCC 58.734 50.000 0.00 0.00 34.80 2.59
3874 4008 4.673132 TCCCCTGAGGTAGAATAGTATCCA 59.327 45.833 0.00 0.00 36.75 3.41
3875 4009 5.020132 CCCCTGAGGTAGAATAGTATCCAG 58.980 50.000 0.00 0.00 0.00 3.86
3876 4010 4.464597 CCCTGAGGTAGAATAGTATCCAGC 59.535 50.000 0.00 0.00 0.00 4.85
3877 4011 4.464597 CCTGAGGTAGAATAGTATCCAGCC 59.535 50.000 0.00 0.00 0.00 4.85
3878 4012 5.329399 CTGAGGTAGAATAGTATCCAGCCT 58.671 45.833 0.00 0.00 0.00 4.58
3879 4013 6.464530 TGAGGTAGAATAGTATCCAGCCTA 57.535 41.667 0.00 0.00 0.00 3.93
3880 4014 6.486056 TGAGGTAGAATAGTATCCAGCCTAG 58.514 44.000 0.00 0.00 0.00 3.02
3881 4015 5.265989 AGGTAGAATAGTATCCAGCCTAGC 58.734 45.833 0.00 0.00 0.00 3.42
3882 4016 5.015817 AGGTAGAATAGTATCCAGCCTAGCT 59.984 44.000 0.00 0.00 40.77 3.32
3883 4017 6.217900 AGGTAGAATAGTATCCAGCCTAGCTA 59.782 42.308 0.00 0.00 36.40 3.32
3884 4018 7.064229 GGTAGAATAGTATCCAGCCTAGCTAT 58.936 42.308 0.00 0.00 36.40 2.97
3885 4019 7.229907 GGTAGAATAGTATCCAGCCTAGCTATC 59.770 44.444 0.00 0.00 36.40 2.08
3886 4020 6.980577 AGAATAGTATCCAGCCTAGCTATCT 58.019 40.000 0.00 0.00 36.40 1.98
3887 4021 7.418378 AGAATAGTATCCAGCCTAGCTATCTT 58.582 38.462 0.00 0.00 36.40 2.40
3888 4022 8.561769 AGAATAGTATCCAGCCTAGCTATCTTA 58.438 37.037 0.00 0.00 36.40 2.10
3889 4023 8.760980 AATAGTATCCAGCCTAGCTATCTTAG 57.239 38.462 0.00 0.00 36.40 2.18
3890 4024 5.515106 AGTATCCAGCCTAGCTATCTTAGG 58.485 45.833 0.00 0.00 36.40 2.69
3891 4025 3.176924 TCCAGCCTAGCTATCTTAGGG 57.823 52.381 0.00 0.00 36.40 3.53
3892 4026 1.552792 CCAGCCTAGCTATCTTAGGGC 59.447 57.143 10.65 10.65 36.40 5.19
3893 4027 2.251818 CAGCCTAGCTATCTTAGGGCA 58.748 52.381 18.54 0.00 41.71 5.36
3894 4028 2.836981 CAGCCTAGCTATCTTAGGGCAT 59.163 50.000 18.54 4.54 41.71 4.40
3895 4029 2.836981 AGCCTAGCTATCTTAGGGCATG 59.163 50.000 18.54 0.00 41.71 4.06
3896 4030 2.093235 GCCTAGCTATCTTAGGGCATGG 60.093 54.545 13.11 0.00 39.38 3.66
3897 4031 2.093235 CCTAGCTATCTTAGGGCATGGC 60.093 54.545 11.56 11.56 0.00 4.40
3908 4042 3.142838 GCATGGCCAACGCTCCAT 61.143 61.111 20.34 0.00 43.45 3.41
3909 4043 2.713967 GCATGGCCAACGCTCCATT 61.714 57.895 20.34 0.00 40.88 3.16
3910 4044 1.140161 CATGGCCAACGCTCCATTG 59.860 57.895 10.96 0.00 40.88 2.82
3911 4045 1.304381 ATGGCCAACGCTCCATTGT 60.304 52.632 10.96 0.00 39.95 2.71
3912 4046 1.597797 ATGGCCAACGCTCCATTGTG 61.598 55.000 10.96 0.00 39.95 3.33
3913 4047 2.568090 GCCAACGCTCCATTGTGG 59.432 61.111 0.00 0.00 39.43 4.17
3914 4048 1.971167 GCCAACGCTCCATTGTGGA 60.971 57.895 0.00 0.00 45.98 4.02
3924 4058 1.361271 CATTGTGGATGGATGCGCC 59.639 57.895 4.18 0.00 31.83 6.53
3932 4066 3.170672 TGGATGCGCCAGCCCTAT 61.171 61.111 4.18 0.00 43.33 2.57
3933 4067 1.841103 TGGATGCGCCAGCCCTATA 60.841 57.895 4.18 0.00 43.33 1.31
3934 4068 1.200760 TGGATGCGCCAGCCCTATAT 61.201 55.000 4.18 0.00 43.33 0.86
3935 4069 0.745845 GGATGCGCCAGCCCTATATG 60.746 60.000 4.18 0.00 44.33 1.78
3936 4070 0.036010 GATGCGCCAGCCCTATATGT 60.036 55.000 4.18 0.00 44.33 2.29
3937 4071 0.036010 ATGCGCCAGCCCTATATGTC 60.036 55.000 4.18 0.00 44.33 3.06
3938 4072 1.371183 GCGCCAGCCCTATATGTCA 59.629 57.895 0.00 0.00 37.42 3.58
3939 4073 0.671781 GCGCCAGCCCTATATGTCAG 60.672 60.000 0.00 0.00 37.42 3.51
3940 4074 0.681733 CGCCAGCCCTATATGTCAGT 59.318 55.000 0.00 0.00 0.00 3.41
3941 4075 1.070758 CGCCAGCCCTATATGTCAGTT 59.929 52.381 0.00 0.00 0.00 3.16
3942 4076 2.498167 GCCAGCCCTATATGTCAGTTG 58.502 52.381 0.00 0.00 0.00 3.16
3943 4077 2.498167 CCAGCCCTATATGTCAGTTGC 58.502 52.381 0.00 0.00 0.00 4.17
3944 4078 2.158769 CCAGCCCTATATGTCAGTTGCA 60.159 50.000 0.00 0.00 0.00 4.08
3945 4079 3.544684 CAGCCCTATATGTCAGTTGCAA 58.455 45.455 0.00 0.00 0.00 4.08
3946 4080 4.139786 CAGCCCTATATGTCAGTTGCAAT 58.860 43.478 0.59 0.00 0.00 3.56
3947 4081 4.581824 CAGCCCTATATGTCAGTTGCAATT 59.418 41.667 0.59 0.00 0.00 2.32
3948 4082 4.581824 AGCCCTATATGTCAGTTGCAATTG 59.418 41.667 15.31 15.31 0.00 2.32
3949 4083 4.339247 GCCCTATATGTCAGTTGCAATTGT 59.661 41.667 19.91 5.44 0.00 2.71
3950 4084 5.506317 GCCCTATATGTCAGTTGCAATTGTC 60.506 44.000 19.91 15.48 0.00 3.18
3951 4085 5.009010 CCCTATATGTCAGTTGCAATTGTCC 59.991 44.000 19.91 12.90 0.00 4.02
3952 4086 5.589855 CCTATATGTCAGTTGCAATTGTCCA 59.410 40.000 19.91 17.28 0.00 4.02
3953 4087 3.928727 ATGTCAGTTGCAATTGTCCAG 57.071 42.857 19.91 0.00 0.00 3.86
3954 4088 1.337703 TGTCAGTTGCAATTGTCCAGC 59.662 47.619 19.91 8.44 0.00 4.85
3955 4089 1.610522 GTCAGTTGCAATTGTCCAGCT 59.389 47.619 19.91 2.08 0.00 4.24
3956 4090 1.881973 TCAGTTGCAATTGTCCAGCTC 59.118 47.619 19.91 0.00 0.00 4.09
3957 4091 1.610038 CAGTTGCAATTGTCCAGCTCA 59.390 47.619 13.42 0.00 0.00 4.26
3958 4092 2.034939 CAGTTGCAATTGTCCAGCTCAA 59.965 45.455 13.42 0.00 0.00 3.02
3959 4093 2.035066 AGTTGCAATTGTCCAGCTCAAC 59.965 45.455 0.59 10.41 34.31 3.18
3960 4094 1.985473 TGCAATTGTCCAGCTCAACT 58.015 45.000 7.40 0.00 0.00 3.16
3961 4095 1.881973 TGCAATTGTCCAGCTCAACTC 59.118 47.619 7.40 0.00 0.00 3.01
3962 4096 1.881973 GCAATTGTCCAGCTCAACTCA 59.118 47.619 7.40 0.00 0.00 3.41
3963 4097 2.294233 GCAATTGTCCAGCTCAACTCAA 59.706 45.455 7.40 0.00 0.00 3.02
3964 4098 3.854784 GCAATTGTCCAGCTCAACTCAAC 60.855 47.826 7.40 0.00 0.00 3.18
3965 4099 1.967319 TTGTCCAGCTCAACTCAACC 58.033 50.000 0.00 0.00 0.00 3.77
3966 4100 1.131638 TGTCCAGCTCAACTCAACCT 58.868 50.000 0.00 0.00 0.00 3.50
3967 4101 1.202687 TGTCCAGCTCAACTCAACCTG 60.203 52.381 0.00 0.00 0.00 4.00
3968 4102 1.131638 TCCAGCTCAACTCAACCTGT 58.868 50.000 0.00 0.00 0.00 4.00
3969 4103 2.037251 GTCCAGCTCAACTCAACCTGTA 59.963 50.000 0.00 0.00 0.00 2.74
3970 4104 2.300152 TCCAGCTCAACTCAACCTGTAG 59.700 50.000 0.00 0.00 0.00 2.74
3971 4105 2.072298 CAGCTCAACTCAACCTGTAGC 58.928 52.381 0.00 0.00 0.00 3.58
3972 4106 1.002544 AGCTCAACTCAACCTGTAGCC 59.997 52.381 0.00 0.00 0.00 3.93
3973 4107 1.002544 GCTCAACTCAACCTGTAGCCT 59.997 52.381 0.00 0.00 0.00 4.58
3974 4108 2.693069 CTCAACTCAACCTGTAGCCTG 58.307 52.381 0.00 0.00 0.00 4.85
3975 4109 1.160137 CAACTCAACCTGTAGCCTGC 58.840 55.000 0.00 0.00 0.00 4.85
3976 4110 0.764890 AACTCAACCTGTAGCCTGCA 59.235 50.000 0.00 0.00 0.00 4.41
3977 4111 0.322975 ACTCAACCTGTAGCCTGCAG 59.677 55.000 6.78 6.78 0.00 4.41
3978 4112 0.610174 CTCAACCTGTAGCCTGCAGA 59.390 55.000 17.39 0.00 36.12 4.26
3979 4113 0.321671 TCAACCTGTAGCCTGCAGAC 59.678 55.000 17.39 2.52 36.12 3.51
3980 4114 0.322975 CAACCTGTAGCCTGCAGACT 59.677 55.000 17.39 12.46 36.12 3.24
3981 4115 1.550524 CAACCTGTAGCCTGCAGACTA 59.449 52.381 17.39 11.16 36.12 2.59
3982 4116 1.938585 ACCTGTAGCCTGCAGACTAA 58.061 50.000 17.39 3.69 36.12 2.24
3983 4117 2.257207 ACCTGTAGCCTGCAGACTAAA 58.743 47.619 17.39 7.64 36.12 1.85
3984 4118 2.637872 ACCTGTAGCCTGCAGACTAAAA 59.362 45.455 17.39 4.40 36.12 1.52
3985 4119 3.003480 CCTGTAGCCTGCAGACTAAAAC 58.997 50.000 17.39 4.75 36.12 2.43
3986 4120 3.557054 CCTGTAGCCTGCAGACTAAAACA 60.557 47.826 17.39 9.63 36.12 2.83
3987 4121 3.664107 TGTAGCCTGCAGACTAAAACAG 58.336 45.455 17.39 0.00 0.00 3.16
3991 4125 3.620966 AGCCTGCAGACTAAAACAGGATC 60.621 47.826 17.39 0.00 45.39 3.36
3992 4126 6.680522 AGCCTGCAGACTAAAACAGGATCC 62.681 50.000 17.39 2.48 45.39 3.36
3993 4127 4.213564 CTGCAGACTAAAACAGGATCCT 57.786 45.455 9.02 9.02 0.00 3.24
4008 4142 2.596776 TCCTGCAGAGGAAGTAGGC 58.403 57.895 17.39 0.00 46.19 3.93
4009 4143 0.041833 TCCTGCAGAGGAAGTAGGCT 59.958 55.000 17.39 0.00 46.19 4.58
4010 4144 0.463620 CCTGCAGAGGAAGTAGGCTC 59.536 60.000 17.39 0.00 42.93 4.70
4011 4145 1.484038 CTGCAGAGGAAGTAGGCTCT 58.516 55.000 8.42 0.00 0.00 4.09
4012 4146 1.830477 CTGCAGAGGAAGTAGGCTCTT 59.170 52.381 8.42 0.00 0.00 2.85
4013 4147 1.552337 TGCAGAGGAAGTAGGCTCTTG 59.448 52.381 0.00 0.00 0.00 3.02
4014 4148 1.134551 GCAGAGGAAGTAGGCTCTTGG 60.135 57.143 0.00 0.00 0.00 3.61
4015 4149 1.134551 CAGAGGAAGTAGGCTCTTGGC 60.135 57.143 0.00 0.00 40.90 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.294780 GAGGGGAGTGTCACAGCAG 59.705 63.158 5.62 0.00 0.00 4.24
1 2 2.217038 GGAGGGGAGTGTCACAGCA 61.217 63.158 5.62 0.00 0.00 4.41
78 87 1.070445 GGATGGCTGGACAGAGATGAG 59.930 57.143 3.00 0.00 0.00 2.90
145 159 2.188817 ACACATAACAGAGGAGGGGAC 58.811 52.381 0.00 0.00 0.00 4.46
146 160 2.642171 ACACATAACAGAGGAGGGGA 57.358 50.000 0.00 0.00 0.00 4.81
176 199 4.996788 ATCGACCCTAAACACTCGTATT 57.003 40.909 0.00 0.00 0.00 1.89
180 203 2.728922 GCTATCGACCCTAAACACTCG 58.271 52.381 0.00 0.00 0.00 4.18
233 256 2.519377 TCGTTCGTTCATCCACAACT 57.481 45.000 0.00 0.00 0.00 3.16
248 271 3.664107 TGCATGAACTAGAAGCTTCGTT 58.336 40.909 20.43 18.31 0.00 3.85
266 289 4.263435 TCACAACTATCAATGATGCTGCA 58.737 39.130 4.13 4.13 0.00 4.41
275 298 5.829924 CCAGGCCTAAATCACAACTATCAAT 59.170 40.000 3.98 0.00 0.00 2.57
276 299 5.045213 TCCAGGCCTAAATCACAACTATCAA 60.045 40.000 3.98 0.00 0.00 2.57
344 367 1.040893 TCGGACCATACCAGATGCGT 61.041 55.000 0.00 0.00 0.00 5.24
380 403 1.043816 TCAGATTCGCCATCCTCTCC 58.956 55.000 0.00 0.00 31.20 3.71
421 444 2.681848 AGCATTCACATAGCTTCTGTGC 59.318 45.455 19.17 10.93 42.93 4.57
437 461 5.712152 AAGGTCTTTTCATTCGAAGCATT 57.288 34.783 3.35 0.00 31.28 3.56
464 493 1.002087 CTAAACGTCCTCACCAGCCTT 59.998 52.381 0.00 0.00 0.00 4.35
470 499 0.606604 TGCTCCTAAACGTCCTCACC 59.393 55.000 0.00 0.00 0.00 4.02
474 503 1.265454 CCCCTGCTCCTAAACGTCCT 61.265 60.000 0.00 0.00 0.00 3.85
500 531 2.171448 AGTGGTGTGGATGCTATCTTCC 59.829 50.000 0.00 0.00 37.13 3.46
528 559 0.178953 AGGAACATGGCCACTTGCTT 60.179 50.000 8.16 0.43 40.92 3.91
555 586 5.932303 CGATAAACCTCCGATTATGACCAAT 59.068 40.000 0.00 0.00 0.00 3.16
597 628 2.632028 AGATGGTCTCCATTGATCTCCG 59.368 50.000 2.71 0.00 45.26 4.63
659 690 5.076182 GGTGACATGATCATCTCTCCTCTA 58.924 45.833 19.19 0.00 40.28 2.43
742 773 4.456911 CCACAACAACATATCAAGTGCTCT 59.543 41.667 0.00 0.00 0.00 4.09
764 795 4.989279 ACAACATATCAAGGCATGAACC 57.011 40.909 0.00 0.00 42.54 3.62
852 884 4.663334 ACTCTGGTAGTGACATGAGTACA 58.337 43.478 0.00 0.00 37.67 2.90
867 899 1.344953 TGTGACCTTGGCACTCTGGT 61.345 55.000 1.27 0.00 42.96 4.00
878 910 6.653020 TCTATATGATGCAGTTTGTGACCTT 58.347 36.000 0.00 0.00 0.00 3.50
905 937 4.157246 TCTGGCTTGTGTAGTTCTTCCTA 58.843 43.478 0.00 0.00 0.00 2.94
912 944 2.554032 GCACATTCTGGCTTGTGTAGTT 59.446 45.455 5.11 0.00 44.01 2.24
1057 1097 0.543277 TAGCCAGCATCTCCAAGGTG 59.457 55.000 0.00 0.00 0.00 4.00
1086 1126 2.867109 AGGATGGAAGAACACCTGTG 57.133 50.000 0.00 0.00 0.00 3.66
1087 1127 2.711009 TGAAGGATGGAAGAACACCTGT 59.289 45.455 0.00 0.00 0.00 4.00
1169 1209 5.724328 TGGAGTGTCTGATATTGAACAGTC 58.276 41.667 9.80 9.80 35.84 3.51
1180 1220 4.421131 ACTCTAAGGTTGGAGTGTCTGAT 58.579 43.478 7.85 0.00 45.63 2.90
1211 1252 5.981088 TGCAAAATGAACATATCACCACT 57.019 34.783 0.00 0.00 41.93 4.00
1212 1253 6.331845 TGATGCAAAATGAACATATCACCAC 58.668 36.000 0.00 0.00 41.93 4.16
1213 1254 6.527057 TGATGCAAAATGAACATATCACCA 57.473 33.333 0.00 0.00 41.93 4.17
1318 1359 8.801882 TTCTCCCTATTTATGTAAACCTTGTG 57.198 34.615 0.00 0.00 0.00 3.33
1335 1376 0.687757 AGCTGCCGACATTCTCCCTA 60.688 55.000 0.00 0.00 0.00 3.53
1397 1438 1.032014 GGACTTTTGGAGCTGTGCAA 58.968 50.000 0.00 0.00 31.08 4.08
1462 1505 0.535102 CCCTGGTGAACTTCTTGCGT 60.535 55.000 0.00 0.00 0.00 5.24
1605 1652 7.041780 CGTCCGAGAAGATGGATTATGATTTTT 60.042 37.037 0.00 0.00 36.48 1.94
1713 1763 1.040646 CGATGATTTCCCCCTCTCGA 58.959 55.000 0.00 0.00 0.00 4.04
1740 1790 3.743584 CGATGAGAGGAGCATTGGTGATT 60.744 47.826 0.00 0.00 0.00 2.57
1802 1852 5.548056 AGATGAACTAGGGTTTTGAGAGGAA 59.452 40.000 0.00 0.00 35.58 3.36
2122 2174 4.890158 ATGGTGAAGTGTCATGTAGTCA 57.110 40.909 0.00 0.00 35.80 3.41
2255 2307 3.693807 ACCATAGCATGAAGCATATGGG 58.306 45.455 19.76 0.00 46.94 4.00
2263 2315 6.357367 AGGTAAACCTAACCATAGCATGAAG 58.643 40.000 0.00 0.00 46.48 3.02
2290 2342 6.320164 AGCATCCACAACTACAACAAAAGTAA 59.680 34.615 0.00 0.00 0.00 2.24
2376 2428 3.825908 AATTTGGTATGTGGGTGGACT 57.174 42.857 0.00 0.00 0.00 3.85
2610 2662 5.412904 AGGTATTCTCTGCAAGCACTAAAAC 59.587 40.000 0.00 0.00 0.00 2.43
2614 2666 4.507710 CAAGGTATTCTCTGCAAGCACTA 58.492 43.478 0.00 0.00 0.00 2.74
2696 2748 8.439172 AGTATAGGGGATATATCGTAGTCCTTC 58.561 40.741 6.64 4.14 0.00 3.46
2710 2762 6.147473 TGATGAACCACAAGTATAGGGGATA 58.853 40.000 0.00 0.00 0.00 2.59
2728 2780 1.146774 TCCAAAGGCCCACTTGATGAA 59.853 47.619 0.00 0.00 39.96 2.57
2771 2823 3.005155 GTGGAATGGCTTATGATTCAGGC 59.995 47.826 0.00 0.00 36.13 4.85
2781 2833 2.568979 AGGGTAAGGTGGAATGGCTTA 58.431 47.619 0.00 0.00 0.00 3.09
2832 2885 2.421424 GCAGGATCCAGTTGTGAATGAC 59.579 50.000 15.82 0.00 0.00 3.06
3025 3080 6.238869 CCTCTTTCTTCTTTTTCCTCCTGTTG 60.239 42.308 0.00 0.00 0.00 3.33
3030 3085 4.145052 TGCCTCTTTCTTCTTTTTCCTCC 58.855 43.478 0.00 0.00 0.00 4.30
3037 3101 6.919775 TCTACTACTGCCTCTTTCTTCTTT 57.080 37.500 0.00 0.00 0.00 2.52
3065 3143 2.208431 GATGTGATGCTTCCTCTTCCG 58.792 52.381 0.00 0.00 0.00 4.30
3079 3157 0.978907 TTCCTCTGCTGCTGATGTGA 59.021 50.000 9.72 4.88 0.00 3.58
3092 3170 3.843619 CCTCTTCCTTTTCCTCTTCCTCT 59.156 47.826 0.00 0.00 0.00 3.69
3093 3171 3.841255 TCCTCTTCCTTTTCCTCTTCCTC 59.159 47.826 0.00 0.00 0.00 3.71
3094 3172 3.875571 TCCTCTTCCTTTTCCTCTTCCT 58.124 45.455 0.00 0.00 0.00 3.36
3095 3173 4.642466 TTCCTCTTCCTTTTCCTCTTCC 57.358 45.455 0.00 0.00 0.00 3.46
3096 3174 5.475220 CCTTTTCCTCTTCCTTTTCCTCTTC 59.525 44.000 0.00 0.00 0.00 2.87
3097 3175 5.134509 TCCTTTTCCTCTTCCTTTTCCTCTT 59.865 40.000 0.00 0.00 0.00 2.85
3098 3176 4.665483 TCCTTTTCCTCTTCCTTTTCCTCT 59.335 41.667 0.00 0.00 0.00 3.69
3099 3177 4.986783 TCCTTTTCCTCTTCCTTTTCCTC 58.013 43.478 0.00 0.00 0.00 3.71
3100 3178 5.134509 TCTTCCTTTTCCTCTTCCTTTTCCT 59.865 40.000 0.00 0.00 0.00 3.36
3101 3179 5.386060 TCTTCCTTTTCCTCTTCCTTTTCC 58.614 41.667 0.00 0.00 0.00 3.13
3102 3180 5.475220 CCTCTTCCTTTTCCTCTTCCTTTTC 59.525 44.000 0.00 0.00 0.00 2.29
3103 3181 5.134509 TCCTCTTCCTTTTCCTCTTCCTTTT 59.865 40.000 0.00 0.00 0.00 2.27
3104 3182 4.665483 TCCTCTTCCTTTTCCTCTTCCTTT 59.335 41.667 0.00 0.00 0.00 3.11
3105 3183 4.243643 TCCTCTTCCTTTTCCTCTTCCTT 58.756 43.478 0.00 0.00 0.00 3.36
3106 3184 3.875571 TCCTCTTCCTTTTCCTCTTCCT 58.124 45.455 0.00 0.00 0.00 3.36
3107 3185 4.226168 TCATCCTCTTCCTTTTCCTCTTCC 59.774 45.833 0.00 0.00 0.00 3.46
3108 3186 5.428184 TCATCCTCTTCCTTTTCCTCTTC 57.572 43.478 0.00 0.00 0.00 2.87
3109 3187 5.311913 AGTTCATCCTCTTCCTTTTCCTCTT 59.688 40.000 0.00 0.00 0.00 2.85
3110 3188 4.849235 AGTTCATCCTCTTCCTTTTCCTCT 59.151 41.667 0.00 0.00 0.00 3.69
3111 3189 5.172687 AGTTCATCCTCTTCCTTTTCCTC 57.827 43.478 0.00 0.00 0.00 3.71
3112 3190 5.320277 CAAGTTCATCCTCTTCCTTTTCCT 58.680 41.667 0.00 0.00 0.00 3.36
3113 3191 4.082517 GCAAGTTCATCCTCTTCCTTTTCC 60.083 45.833 0.00 0.00 0.00 3.13
3114 3192 4.520492 TGCAAGTTCATCCTCTTCCTTTTC 59.480 41.667 0.00 0.00 0.00 2.29
3115 3193 4.279420 GTGCAAGTTCATCCTCTTCCTTTT 59.721 41.667 0.00 0.00 0.00 2.27
3199 3319 8.552034 CAGTTTATCCTAACTACTAGCAAATGC 58.448 37.037 0.00 0.00 36.24 3.56
3293 3420 2.501723 ACGGCTAAAGATGTGATCACCT 59.498 45.455 22.85 13.58 0.00 4.00
3398 3525 4.211125 TGGTTGTCTGCATTAGGTTTTCA 58.789 39.130 0.00 0.00 0.00 2.69
3515 3649 2.289819 CCACTTCCTTTAGGGCGTGTTA 60.290 50.000 13.48 0.00 35.74 2.41
3528 3662 1.918957 CTTCCTTCCATCCCACTTCCT 59.081 52.381 0.00 0.00 0.00 3.36
3529 3663 1.916181 TCTTCCTTCCATCCCACTTCC 59.084 52.381 0.00 0.00 0.00 3.46
3530 3664 3.264450 TCTTCTTCCTTCCATCCCACTTC 59.736 47.826 0.00 0.00 0.00 3.01
3531 3665 3.260205 TCTTCTTCCTTCCATCCCACTT 58.740 45.455 0.00 0.00 0.00 3.16
3532 3666 2.921221 TCTTCTTCCTTCCATCCCACT 58.079 47.619 0.00 0.00 0.00 4.00
3533 3667 3.742640 CGATCTTCTTCCTTCCATCCCAC 60.743 52.174 0.00 0.00 0.00 4.61
3534 3668 2.435805 CGATCTTCTTCCTTCCATCCCA 59.564 50.000 0.00 0.00 0.00 4.37
3535 3669 2.700897 TCGATCTTCTTCCTTCCATCCC 59.299 50.000 0.00 0.00 0.00 3.85
3536 3670 3.801983 GCTCGATCTTCTTCCTTCCATCC 60.802 52.174 0.00 0.00 0.00 3.51
3537 3671 3.389221 GCTCGATCTTCTTCCTTCCATC 58.611 50.000 0.00 0.00 0.00 3.51
3538 3672 2.223923 CGCTCGATCTTCTTCCTTCCAT 60.224 50.000 0.00 0.00 0.00 3.41
3539 3673 1.135139 CGCTCGATCTTCTTCCTTCCA 59.865 52.381 0.00 0.00 0.00 3.53
3540 3674 1.846541 CGCTCGATCTTCTTCCTTCC 58.153 55.000 0.00 0.00 0.00 3.46
3541 3675 1.204792 GCGCTCGATCTTCTTCCTTC 58.795 55.000 0.00 0.00 0.00 3.46
3542 3676 0.532573 TGCGCTCGATCTTCTTCCTT 59.467 50.000 9.73 0.00 0.00 3.36
3543 3677 0.532573 TTGCGCTCGATCTTCTTCCT 59.467 50.000 9.73 0.00 0.00 3.36
3544 3678 1.260033 CATTGCGCTCGATCTTCTTCC 59.740 52.381 9.73 0.00 0.00 3.46
3545 3679 1.929836 ACATTGCGCTCGATCTTCTTC 59.070 47.619 9.73 0.00 0.00 2.87
3546 3680 2.015736 ACATTGCGCTCGATCTTCTT 57.984 45.000 9.73 0.00 0.00 2.52
3547 3681 2.544694 CCTACATTGCGCTCGATCTTCT 60.545 50.000 9.73 0.00 0.00 2.85
3548 3682 1.789464 CCTACATTGCGCTCGATCTTC 59.211 52.381 9.73 0.00 0.00 2.87
3549 3683 1.858091 CCTACATTGCGCTCGATCTT 58.142 50.000 9.73 0.00 0.00 2.40
3550 3684 0.598680 GCCTACATTGCGCTCGATCT 60.599 55.000 9.73 0.00 0.00 2.75
3551 3685 1.856012 GCCTACATTGCGCTCGATC 59.144 57.895 9.73 0.00 0.00 3.69
3552 3686 1.951130 CGCCTACATTGCGCTCGAT 60.951 57.895 9.73 0.00 46.01 3.59
3553 3687 2.582226 CGCCTACATTGCGCTCGA 60.582 61.111 9.73 0.00 46.01 4.04
3559 3693 0.461961 AGTCTCCTCGCCTACATTGC 59.538 55.000 0.00 0.00 0.00 3.56
3560 3694 3.570125 TCATAGTCTCCTCGCCTACATTG 59.430 47.826 0.00 0.00 0.00 2.82
3561 3695 3.570550 GTCATAGTCTCCTCGCCTACATT 59.429 47.826 0.00 0.00 0.00 2.71
3562 3696 3.150767 GTCATAGTCTCCTCGCCTACAT 58.849 50.000 0.00 0.00 0.00 2.29
3563 3697 2.172930 AGTCATAGTCTCCTCGCCTACA 59.827 50.000 0.00 0.00 0.00 2.74
3564 3698 2.853705 AGTCATAGTCTCCTCGCCTAC 58.146 52.381 0.00 0.00 0.00 3.18
3565 3699 3.008157 CCTAGTCATAGTCTCCTCGCCTA 59.992 52.174 0.00 0.00 0.00 3.93
3566 3700 2.224670 CCTAGTCATAGTCTCCTCGCCT 60.225 54.545 0.00 0.00 0.00 5.52
3567 3701 2.156098 CCTAGTCATAGTCTCCTCGCC 58.844 57.143 0.00 0.00 0.00 5.54
3568 3702 2.156098 CCCTAGTCATAGTCTCCTCGC 58.844 57.143 0.00 0.00 0.00 5.03
3569 3703 3.404899 GTCCCTAGTCATAGTCTCCTCG 58.595 54.545 0.00 0.00 0.00 4.63
3570 3704 3.758425 GGTCCCTAGTCATAGTCTCCTC 58.242 54.545 0.00 0.00 0.00 3.71
3571 3705 2.106857 CGGTCCCTAGTCATAGTCTCCT 59.893 54.545 0.00 0.00 0.00 3.69
3572 3706 2.506444 CGGTCCCTAGTCATAGTCTCC 58.494 57.143 0.00 0.00 0.00 3.71
3573 3707 2.106166 TCCGGTCCCTAGTCATAGTCTC 59.894 54.545 0.00 0.00 0.00 3.36
3574 3708 2.133520 TCCGGTCCCTAGTCATAGTCT 58.866 52.381 0.00 0.00 0.00 3.24
3575 3709 2.158638 AGTCCGGTCCCTAGTCATAGTC 60.159 54.545 0.00 0.00 0.00 2.59
3576 3710 1.851653 AGTCCGGTCCCTAGTCATAGT 59.148 52.381 0.00 0.00 0.00 2.12
3577 3711 2.660670 AGTCCGGTCCCTAGTCATAG 57.339 55.000 0.00 0.00 0.00 2.23
3578 3712 2.107204 GGTAGTCCGGTCCCTAGTCATA 59.893 54.545 0.00 0.00 0.00 2.15
3579 3713 1.133544 GGTAGTCCGGTCCCTAGTCAT 60.134 57.143 0.00 0.00 0.00 3.06
3580 3714 0.257039 GGTAGTCCGGTCCCTAGTCA 59.743 60.000 0.00 0.00 0.00 3.41
3581 3715 3.108292 GGTAGTCCGGTCCCTAGTC 57.892 63.158 0.00 0.00 0.00 2.59
3593 3727 1.520787 CAATGGGACGCCGGTAGTC 60.521 63.158 19.53 19.53 37.86 2.59
3594 3728 0.971959 TACAATGGGACGCCGGTAGT 60.972 55.000 1.90 3.36 0.00 2.73
3595 3729 0.529119 GTACAATGGGACGCCGGTAG 60.529 60.000 1.90 0.00 0.00 3.18
3596 3730 1.256361 TGTACAATGGGACGCCGGTA 61.256 55.000 1.90 0.00 0.00 4.02
3597 3731 2.266689 GTACAATGGGACGCCGGT 59.733 61.111 1.90 0.00 0.00 5.28
3598 3732 1.813753 CTGTACAATGGGACGCCGG 60.814 63.158 0.00 0.00 0.00 6.13
3599 3733 2.461110 GCTGTACAATGGGACGCCG 61.461 63.158 0.00 0.00 0.00 6.46
3600 3734 1.078426 AGCTGTACAATGGGACGCC 60.078 57.895 0.00 0.00 0.00 5.68
3601 3735 1.982073 GCAGCTGTACAATGGGACGC 61.982 60.000 16.64 2.00 0.00 5.19
3602 3736 0.673333 TGCAGCTGTACAATGGGACG 60.673 55.000 16.64 0.00 0.00 4.79
3603 3737 1.755179 ATGCAGCTGTACAATGGGAC 58.245 50.000 16.64 0.00 0.00 4.46
3604 3738 2.093890 CAATGCAGCTGTACAATGGGA 58.906 47.619 16.64 0.00 0.00 4.37
3605 3739 1.820519 ACAATGCAGCTGTACAATGGG 59.179 47.619 16.64 0.46 0.00 4.00
3606 3740 2.476686 CGACAATGCAGCTGTACAATGG 60.477 50.000 16.64 4.78 0.00 3.16
3607 3741 2.777494 CGACAATGCAGCTGTACAATG 58.223 47.619 16.64 13.24 0.00 2.82
3608 3742 1.131126 GCGACAATGCAGCTGTACAAT 59.869 47.619 16.64 0.00 34.15 2.71
3609 3743 0.516877 GCGACAATGCAGCTGTACAA 59.483 50.000 16.64 0.00 34.15 2.41
3610 3744 0.602372 TGCGACAATGCAGCTGTACA 60.602 50.000 16.64 5.99 40.62 2.90
3611 3745 2.161831 TGCGACAATGCAGCTGTAC 58.838 52.632 16.64 0.00 40.62 2.90
3612 3746 4.691506 TGCGACAATGCAGCTGTA 57.308 50.000 16.64 12.13 40.62 2.74
3618 3752 2.169561 TCCTATAGGTTGCGACAATGCA 59.830 45.455 18.51 0.00 44.61 3.96
3619 3753 2.833794 TCCTATAGGTTGCGACAATGC 58.166 47.619 18.51 0.00 36.34 3.56
3620 3754 4.816385 ACAATCCTATAGGTTGCGACAATG 59.184 41.667 23.19 11.56 36.34 2.82
3621 3755 4.816385 CACAATCCTATAGGTTGCGACAAT 59.184 41.667 23.19 6.73 36.34 2.71
3622 3756 4.081365 TCACAATCCTATAGGTTGCGACAA 60.081 41.667 23.19 4.94 36.34 3.18
3623 3757 3.449377 TCACAATCCTATAGGTTGCGACA 59.551 43.478 23.19 5.55 36.34 4.35
3624 3758 4.054780 TCACAATCCTATAGGTTGCGAC 57.945 45.455 23.19 0.00 36.34 5.19
3625 3759 4.262463 GGATCACAATCCTATAGGTTGCGA 60.262 45.833 23.19 20.89 46.97 5.10
3626 3760 3.997021 GGATCACAATCCTATAGGTTGCG 59.003 47.826 23.19 17.83 46.97 4.85
3638 3772 3.313526 CCCACGATGAAAGGATCACAATC 59.686 47.826 0.00 0.00 41.93 2.67
3639 3773 3.054434 TCCCACGATGAAAGGATCACAAT 60.054 43.478 0.00 0.00 41.93 2.71
3640 3774 2.304470 TCCCACGATGAAAGGATCACAA 59.696 45.455 0.00 0.00 41.93 3.33
3641 3775 1.905894 TCCCACGATGAAAGGATCACA 59.094 47.619 0.00 0.00 41.93 3.58
3642 3776 2.691409 TCCCACGATGAAAGGATCAC 57.309 50.000 0.00 0.00 41.93 3.06
3643 3777 3.931907 AATCCCACGATGAAAGGATCA 57.068 42.857 0.00 0.00 43.67 2.92
3644 3778 5.215252 TCTAATCCCACGATGAAAGGATC 57.785 43.478 0.00 0.00 38.17 3.36
3645 3779 5.131142 AGTTCTAATCCCACGATGAAAGGAT 59.869 40.000 0.00 0.00 40.92 3.24
3646 3780 4.469945 AGTTCTAATCCCACGATGAAAGGA 59.530 41.667 0.00 0.00 0.00 3.36
3647 3781 4.770795 AGTTCTAATCCCACGATGAAAGG 58.229 43.478 0.00 0.00 0.00 3.11
3648 3782 9.197694 CTATTAGTTCTAATCCCACGATGAAAG 57.802 37.037 8.14 0.00 0.00 2.62
3649 3783 8.701895 ACTATTAGTTCTAATCCCACGATGAAA 58.298 33.333 8.14 0.00 0.00 2.69
3650 3784 8.246430 ACTATTAGTTCTAATCCCACGATGAA 57.754 34.615 8.14 0.00 0.00 2.57
3651 3785 7.724506 AGACTATTAGTTCTAATCCCACGATGA 59.275 37.037 8.14 0.00 0.00 2.92
3652 3786 7.887381 AGACTATTAGTTCTAATCCCACGATG 58.113 38.462 8.14 0.00 0.00 3.84
3653 3787 8.361139 CAAGACTATTAGTTCTAATCCCACGAT 58.639 37.037 8.14 0.00 0.00 3.73
3654 3788 7.683704 GCAAGACTATTAGTTCTAATCCCACGA 60.684 40.741 8.14 0.00 0.00 4.35
3655 3789 6.421202 GCAAGACTATTAGTTCTAATCCCACG 59.579 42.308 8.14 0.00 0.00 4.94
3656 3790 7.501844 AGCAAGACTATTAGTTCTAATCCCAC 58.498 38.462 8.14 1.52 0.00 4.61
3657 3791 7.676683 AGCAAGACTATTAGTTCTAATCCCA 57.323 36.000 8.14 0.00 0.00 4.37
3658 3792 8.639761 TGTAGCAAGACTATTAGTTCTAATCCC 58.360 37.037 8.14 1.27 32.15 3.85
3663 3797 8.775527 CGAGATGTAGCAAGACTATTAGTTCTA 58.224 37.037 0.00 0.00 32.15 2.10
3664 3798 7.255312 CCGAGATGTAGCAAGACTATTAGTTCT 60.255 40.741 0.00 0.00 32.15 3.01
3665 3799 6.858993 CCGAGATGTAGCAAGACTATTAGTTC 59.141 42.308 0.00 0.00 32.15 3.01
3666 3800 6.321690 ACCGAGATGTAGCAAGACTATTAGTT 59.678 38.462 0.00 0.00 32.15 2.24
3667 3801 5.828859 ACCGAGATGTAGCAAGACTATTAGT 59.171 40.000 0.00 0.00 32.15 2.24
3668 3802 6.017026 TGACCGAGATGTAGCAAGACTATTAG 60.017 42.308 0.00 0.00 32.15 1.73
3669 3803 5.826208 TGACCGAGATGTAGCAAGACTATTA 59.174 40.000 0.00 0.00 32.15 0.98
3670 3804 4.645136 TGACCGAGATGTAGCAAGACTATT 59.355 41.667 0.00 0.00 32.15 1.73
3671 3805 4.207955 TGACCGAGATGTAGCAAGACTAT 58.792 43.478 0.00 0.00 32.15 2.12
3672 3806 3.617284 TGACCGAGATGTAGCAAGACTA 58.383 45.455 0.00 0.00 0.00 2.59
3673 3807 2.447443 TGACCGAGATGTAGCAAGACT 58.553 47.619 0.00 0.00 0.00 3.24
3674 3808 2.941453 TGACCGAGATGTAGCAAGAC 57.059 50.000 0.00 0.00 0.00 3.01
3675 3809 4.645136 ACTATTGACCGAGATGTAGCAAGA 59.355 41.667 0.00 0.00 0.00 3.02
3676 3810 4.938080 ACTATTGACCGAGATGTAGCAAG 58.062 43.478 0.00 0.00 0.00 4.01
3677 3811 4.497507 CGACTATTGACCGAGATGTAGCAA 60.498 45.833 0.00 0.00 0.00 3.91
3678 3812 3.003378 CGACTATTGACCGAGATGTAGCA 59.997 47.826 0.00 0.00 0.00 3.49
3679 3813 3.250280 TCGACTATTGACCGAGATGTAGC 59.750 47.826 0.00 0.00 0.00 3.58
3680 3814 5.386447 CATCGACTATTGACCGAGATGTAG 58.614 45.833 0.00 0.00 35.70 2.74
3681 3815 4.320275 GCATCGACTATTGACCGAGATGTA 60.320 45.833 0.00 0.00 37.08 2.29
3682 3816 3.551046 GCATCGACTATTGACCGAGATGT 60.551 47.826 0.00 0.00 37.08 3.06
3683 3817 2.983136 GCATCGACTATTGACCGAGATG 59.017 50.000 0.00 0.00 37.60 2.90
3684 3818 2.887783 AGCATCGACTATTGACCGAGAT 59.112 45.455 0.00 0.00 35.70 2.75
3685 3819 2.298610 AGCATCGACTATTGACCGAGA 58.701 47.619 0.00 0.00 35.70 4.04
3686 3820 2.783828 AGCATCGACTATTGACCGAG 57.216 50.000 0.00 0.00 35.70 4.63
3687 3821 6.150474 TGAATATAGCATCGACTATTGACCGA 59.850 38.462 1.33 0.00 34.66 4.69
3688 3822 6.322491 TGAATATAGCATCGACTATTGACCG 58.678 40.000 1.33 0.00 34.66 4.79
3689 3823 7.976175 TCATGAATATAGCATCGACTATTGACC 59.024 37.037 0.00 0.00 34.66 4.02
3690 3824 8.917415 TCATGAATATAGCATCGACTATTGAC 57.083 34.615 0.00 0.00 34.66 3.18
3691 3825 8.960591 TCTCATGAATATAGCATCGACTATTGA 58.039 33.333 0.00 0.00 34.66 2.57
3692 3826 9.747293 ATCTCATGAATATAGCATCGACTATTG 57.253 33.333 0.00 0.00 34.66 1.90
3696 3830 8.933807 CAAAATCTCATGAATATAGCATCGACT 58.066 33.333 0.00 0.00 0.00 4.18
3697 3831 7.691463 GCAAAATCTCATGAATATAGCATCGAC 59.309 37.037 0.00 0.00 0.00 4.20
3698 3832 7.388500 TGCAAAATCTCATGAATATAGCATCGA 59.612 33.333 0.00 0.00 0.00 3.59
3699 3833 7.524065 TGCAAAATCTCATGAATATAGCATCG 58.476 34.615 0.00 0.00 0.00 3.84
3700 3834 9.504710 GATGCAAAATCTCATGAATATAGCATC 57.495 33.333 21.94 21.94 44.11 3.91
3701 3835 9.020731 TGATGCAAAATCTCATGAATATAGCAT 57.979 29.630 16.27 16.27 40.13 3.79
3702 3836 8.398878 TGATGCAAAATCTCATGAATATAGCA 57.601 30.769 9.75 9.75 0.00 3.49
3703 3837 9.343103 CTTGATGCAAAATCTCATGAATATAGC 57.657 33.333 0.00 0.00 0.00 2.97
3708 3842 9.098355 CAAATCTTGATGCAAAATCTCATGAAT 57.902 29.630 0.00 0.00 30.08 2.57
3709 3843 8.092068 ACAAATCTTGATGCAAAATCTCATGAA 58.908 29.630 0.00 0.00 30.08 2.57
3710 3844 7.544217 CACAAATCTTGATGCAAAATCTCATGA 59.456 33.333 0.00 0.00 0.00 3.07
3711 3845 7.674008 GCACAAATCTTGATGCAAAATCTCATG 60.674 37.037 0.00 0.00 37.51 3.07
3712 3846 6.312918 GCACAAATCTTGATGCAAAATCTCAT 59.687 34.615 0.00 0.00 37.51 2.90
3713 3847 5.636121 GCACAAATCTTGATGCAAAATCTCA 59.364 36.000 0.00 0.00 37.51 3.27
3714 3848 5.636121 TGCACAAATCTTGATGCAAAATCTC 59.364 36.000 11.55 0.00 41.32 2.75
3715 3849 5.543714 TGCACAAATCTTGATGCAAAATCT 58.456 33.333 11.55 0.00 41.32 2.40
3716 3850 5.849357 TGCACAAATCTTGATGCAAAATC 57.151 34.783 11.55 0.00 41.32 2.17
3721 3855 5.992829 AGAAAATTGCACAAATCTTGATGCA 59.007 32.000 10.51 10.51 41.98 3.96
3722 3856 6.476243 AGAAAATTGCACAAATCTTGATGC 57.524 33.333 0.00 1.13 37.83 3.91
3723 3857 9.724839 AAAAAGAAAATTGCACAAATCTTGATG 57.275 25.926 9.02 0.00 0.00 3.07
3816 3950 3.795688 GGTACACCCCATGATGATCAT 57.204 47.619 8.25 8.25 37.65 2.45
3829 3963 2.429250 GGCATATTTGGTTGGGTACACC 59.571 50.000 0.00 0.00 40.81 4.16
3830 3964 3.361786 AGGCATATTTGGTTGGGTACAC 58.638 45.455 0.00 0.00 0.00 2.90
3831 3965 3.626222 GGAGGCATATTTGGTTGGGTACA 60.626 47.826 0.00 0.00 0.00 2.90
3832 3966 2.956333 GGAGGCATATTTGGTTGGGTAC 59.044 50.000 0.00 0.00 0.00 3.34
3833 3967 2.091555 GGGAGGCATATTTGGTTGGGTA 60.092 50.000 0.00 0.00 0.00 3.69
3834 3968 1.342975 GGGAGGCATATTTGGTTGGGT 60.343 52.381 0.00 0.00 0.00 4.51
3835 3969 1.413118 GGGAGGCATATTTGGTTGGG 58.587 55.000 0.00 0.00 0.00 4.12
3836 3970 1.062962 AGGGGAGGCATATTTGGTTGG 60.063 52.381 0.00 0.00 0.00 3.77
3837 3971 2.034124 CAGGGGAGGCATATTTGGTTG 58.966 52.381 0.00 0.00 0.00 3.77
3838 3972 1.929494 TCAGGGGAGGCATATTTGGTT 59.071 47.619 0.00 0.00 0.00 3.67
3839 3973 1.496429 CTCAGGGGAGGCATATTTGGT 59.504 52.381 0.00 0.00 37.51 3.67
3840 3974 2.283145 CTCAGGGGAGGCATATTTGG 57.717 55.000 0.00 0.00 37.51 3.28
3850 3984 5.222358 TGGATACTATTCTACCTCAGGGGAG 60.222 48.000 0.00 0.00 40.77 4.30
3851 3985 4.673132 TGGATACTATTCTACCTCAGGGGA 59.327 45.833 0.00 0.00 36.66 4.81
3852 3986 5.011982 TGGATACTATTCTACCTCAGGGG 57.988 47.826 0.00 0.00 38.34 4.79
3853 3987 4.464597 GCTGGATACTATTCTACCTCAGGG 59.535 50.000 0.00 0.00 36.48 4.45
3854 3988 4.464597 GGCTGGATACTATTCTACCTCAGG 59.535 50.000 0.00 0.00 37.61 3.86
3855 3989 5.329399 AGGCTGGATACTATTCTACCTCAG 58.671 45.833 0.00 0.00 37.61 3.35
3856 3990 5.340891 AGGCTGGATACTATTCTACCTCA 57.659 43.478 0.00 0.00 37.61 3.86
3857 3991 5.358725 GCTAGGCTGGATACTATTCTACCTC 59.641 48.000 0.43 0.00 37.61 3.85
3858 3992 5.015817 AGCTAGGCTGGATACTATTCTACCT 59.984 44.000 0.43 0.00 37.57 3.08
3859 3993 5.265989 AGCTAGGCTGGATACTATTCTACC 58.734 45.833 0.43 0.00 37.57 3.18
3860 3994 7.996644 AGATAGCTAGGCTGGATACTATTCTAC 59.003 40.741 0.43 0.00 40.10 2.59
3861 3995 8.108378 AGATAGCTAGGCTGGATACTATTCTA 57.892 38.462 0.43 0.00 40.10 2.10
3862 3996 6.980577 AGATAGCTAGGCTGGATACTATTCT 58.019 40.000 0.43 0.00 40.10 2.40
3863 3997 7.654022 AAGATAGCTAGGCTGGATACTATTC 57.346 40.000 0.43 0.00 40.10 1.75
3864 3998 7.782644 CCTAAGATAGCTAGGCTGGATACTATT 59.217 40.741 0.43 0.00 40.10 1.73
3865 3999 7.294584 CCTAAGATAGCTAGGCTGGATACTAT 58.705 42.308 0.43 0.00 40.10 2.12
3866 4000 6.354038 CCCTAAGATAGCTAGGCTGGATACTA 60.354 46.154 0.43 0.00 40.10 1.82
3867 4001 5.515106 CCTAAGATAGCTAGGCTGGATACT 58.485 45.833 0.43 0.00 40.10 2.12
3868 4002 4.647399 CCCTAAGATAGCTAGGCTGGATAC 59.353 50.000 0.43 0.00 40.10 2.24
3869 4003 4.873010 CCCTAAGATAGCTAGGCTGGATA 58.127 47.826 0.43 0.00 40.10 2.59
3870 4004 3.718723 CCCTAAGATAGCTAGGCTGGAT 58.281 50.000 0.43 0.00 40.10 3.41
3871 4005 2.823535 GCCCTAAGATAGCTAGGCTGGA 60.824 54.545 11.22 0.00 40.10 3.86
3872 4006 1.552792 GCCCTAAGATAGCTAGGCTGG 59.447 57.143 11.22 0.00 40.10 4.85
3873 4007 2.251818 TGCCCTAAGATAGCTAGGCTG 58.748 52.381 17.45 0.00 40.10 4.85
3874 4008 2.704190 TGCCCTAAGATAGCTAGGCT 57.296 50.000 17.45 6.98 43.41 4.58
3875 4009 2.093235 CCATGCCCTAAGATAGCTAGGC 60.093 54.545 11.51 11.51 40.87 3.93
3876 4010 2.093235 GCCATGCCCTAAGATAGCTAGG 60.093 54.545 0.00 0.00 0.00 3.02
3877 4011 2.093235 GGCCATGCCCTAAGATAGCTAG 60.093 54.545 0.00 0.00 44.06 3.42
3878 4012 1.909302 GGCCATGCCCTAAGATAGCTA 59.091 52.381 0.00 0.00 44.06 3.32
3879 4013 0.695347 GGCCATGCCCTAAGATAGCT 59.305 55.000 0.00 0.00 44.06 3.32
3880 4014 3.256281 GGCCATGCCCTAAGATAGC 57.744 57.895 0.00 0.00 44.06 2.97
3891 4025 2.713967 AATGGAGCGTTGGCCATGC 61.714 57.895 19.91 19.91 43.85 4.06
3892 4026 1.140161 CAATGGAGCGTTGGCCATG 59.860 57.895 6.09 3.11 43.85 3.66
3893 4027 1.304381 ACAATGGAGCGTTGGCCAT 60.304 52.632 6.09 0.00 46.49 4.40
3894 4028 2.115052 ACAATGGAGCGTTGGCCA 59.885 55.556 0.00 0.00 41.24 5.36
3895 4029 2.568090 CACAATGGAGCGTTGGCC 59.432 61.111 0.00 0.00 41.24 5.36
3896 4030 1.971167 TCCACAATGGAGCGTTGGC 60.971 57.895 0.00 0.00 42.67 4.52
3897 4031 4.395519 TCCACAATGGAGCGTTGG 57.604 55.556 0.00 0.00 42.67 3.77
3906 4040 1.361271 GGCGCATCCATCCACAATG 59.639 57.895 10.83 0.00 34.93 2.82
3907 4041 1.076850 TGGCGCATCCATCCACAAT 60.077 52.632 10.83 0.00 40.72 2.71
3908 4042 1.750018 CTGGCGCATCCATCCACAA 60.750 57.895 10.83 0.00 45.50 3.33
3909 4043 2.124612 CTGGCGCATCCATCCACA 60.125 61.111 10.83 0.00 45.50 4.17
3910 4044 3.589881 GCTGGCGCATCCATCCAC 61.590 66.667 10.83 0.00 45.50 4.02
3913 4047 2.475371 ATAGGGCTGGCGCATCCATC 62.475 60.000 10.83 0.00 45.50 3.51
3914 4048 1.200760 TATAGGGCTGGCGCATCCAT 61.201 55.000 10.83 6.99 45.50 3.41
3915 4049 1.200760 ATATAGGGCTGGCGCATCCA 61.201 55.000 10.83 0.00 44.18 3.41
3916 4050 0.745845 CATATAGGGCTGGCGCATCC 60.746 60.000 10.83 6.49 38.10 3.51
3917 4051 0.036010 ACATATAGGGCTGGCGCATC 60.036 55.000 10.83 0.00 38.10 3.91
3918 4052 0.036010 GACATATAGGGCTGGCGCAT 60.036 55.000 10.83 0.00 38.10 4.73
3919 4053 1.371183 GACATATAGGGCTGGCGCA 59.629 57.895 10.83 0.00 38.10 6.09
3920 4054 0.671781 CTGACATATAGGGCTGGCGC 60.672 60.000 0.00 0.00 0.00 6.53
3921 4055 0.681733 ACTGACATATAGGGCTGGCG 59.318 55.000 2.06 0.00 0.00 5.69
3922 4056 2.498167 CAACTGACATATAGGGCTGGC 58.502 52.381 2.06 0.00 0.00 4.85
3923 4057 2.158769 TGCAACTGACATATAGGGCTGG 60.159 50.000 2.06 0.00 0.00 4.85
3924 4058 3.198409 TGCAACTGACATATAGGGCTG 57.802 47.619 0.00 0.00 0.00 4.85
3925 4059 3.931907 TTGCAACTGACATATAGGGCT 57.068 42.857 0.00 0.00 0.00 5.19
3926 4060 4.339247 ACAATTGCAACTGACATATAGGGC 59.661 41.667 15.88 0.00 0.00 5.19
3927 4061 5.009010 GGACAATTGCAACTGACATATAGGG 59.991 44.000 15.88 0.00 0.00 3.53
3928 4062 5.589855 TGGACAATTGCAACTGACATATAGG 59.410 40.000 15.88 0.00 0.00 2.57
3929 4063 6.682423 TGGACAATTGCAACTGACATATAG 57.318 37.500 15.88 0.00 0.00 1.31
3930 4064 5.066375 GCTGGACAATTGCAACTGACATATA 59.934 40.000 15.88 0.00 0.00 0.86
3931 4065 4.142315 GCTGGACAATTGCAACTGACATAT 60.142 41.667 15.88 0.00 0.00 1.78
3932 4066 3.191162 GCTGGACAATTGCAACTGACATA 59.809 43.478 15.88 0.94 0.00 2.29
3933 4067 2.029649 GCTGGACAATTGCAACTGACAT 60.030 45.455 15.88 0.00 0.00 3.06
3934 4068 1.337703 GCTGGACAATTGCAACTGACA 59.662 47.619 15.88 11.74 0.00 3.58
3935 4069 1.610522 AGCTGGACAATTGCAACTGAC 59.389 47.619 15.88 8.47 0.00 3.51
3936 4070 1.881973 GAGCTGGACAATTGCAACTGA 59.118 47.619 15.88 0.00 0.00 3.41
3937 4071 1.610038 TGAGCTGGACAATTGCAACTG 59.390 47.619 6.30 6.30 0.00 3.16
3938 4072 1.985473 TGAGCTGGACAATTGCAACT 58.015 45.000 0.00 0.00 0.00 3.16
3939 4073 2.035066 AGTTGAGCTGGACAATTGCAAC 59.965 45.455 0.00 9.68 35.61 4.17
3940 4074 2.294233 GAGTTGAGCTGGACAATTGCAA 59.706 45.455 5.05 0.00 0.00 4.08
3941 4075 1.881973 GAGTTGAGCTGGACAATTGCA 59.118 47.619 5.05 0.00 0.00 4.08
3942 4076 1.881973 TGAGTTGAGCTGGACAATTGC 59.118 47.619 5.05 0.00 0.00 3.56
3943 4077 3.304928 GGTTGAGTTGAGCTGGACAATTG 60.305 47.826 3.24 3.24 0.00 2.32
3944 4078 2.887152 GGTTGAGTTGAGCTGGACAATT 59.113 45.455 0.00 0.00 0.00 2.32
3945 4079 2.107204 AGGTTGAGTTGAGCTGGACAAT 59.893 45.455 0.00 0.00 0.00 2.71
3946 4080 1.490490 AGGTTGAGTTGAGCTGGACAA 59.510 47.619 0.00 0.00 0.00 3.18
3947 4081 1.131638 AGGTTGAGTTGAGCTGGACA 58.868 50.000 0.00 0.00 0.00 4.02
3948 4082 1.202698 ACAGGTTGAGTTGAGCTGGAC 60.203 52.381 0.00 0.00 44.62 4.02
3949 4083 1.131638 ACAGGTTGAGTTGAGCTGGA 58.868 50.000 0.00 0.00 44.62 3.86
3950 4084 2.693069 CTACAGGTTGAGTTGAGCTGG 58.307 52.381 0.00 0.00 44.62 4.85
3951 4085 2.072298 GCTACAGGTTGAGTTGAGCTG 58.928 52.381 0.00 2.14 45.52 4.24
3952 4086 1.002544 GGCTACAGGTTGAGTTGAGCT 59.997 52.381 0.00 0.00 0.00 4.09
3953 4087 1.002544 AGGCTACAGGTTGAGTTGAGC 59.997 52.381 0.00 0.00 0.00 4.26
3954 4088 2.693069 CAGGCTACAGGTTGAGTTGAG 58.307 52.381 0.00 0.00 0.00 3.02
3955 4089 1.270839 GCAGGCTACAGGTTGAGTTGA 60.271 52.381 0.00 0.00 0.00 3.18
3956 4090 1.160137 GCAGGCTACAGGTTGAGTTG 58.840 55.000 0.00 0.00 0.00 3.16
3957 4091 0.764890 TGCAGGCTACAGGTTGAGTT 59.235 50.000 0.00 0.00 0.00 3.01
3958 4092 0.322975 CTGCAGGCTACAGGTTGAGT 59.677 55.000 5.57 0.00 0.00 3.41
3959 4093 0.610174 TCTGCAGGCTACAGGTTGAG 59.390 55.000 15.13 0.00 35.78 3.02
3960 4094 0.321671 GTCTGCAGGCTACAGGTTGA 59.678 55.000 12.09 0.00 35.78 3.18
3961 4095 0.322975 AGTCTGCAGGCTACAGGTTG 59.677 55.000 21.80 0.00 35.78 3.77
3962 4096 1.938585 TAGTCTGCAGGCTACAGGTT 58.061 50.000 23.98 1.16 35.78 3.50
3963 4097 1.938585 TTAGTCTGCAGGCTACAGGT 58.061 50.000 27.29 3.94 35.78 4.00
3964 4098 3.003480 GTTTTAGTCTGCAGGCTACAGG 58.997 50.000 27.29 0.00 35.78 4.00
3965 4099 3.664107 TGTTTTAGTCTGCAGGCTACAG 58.336 45.455 27.29 8.51 36.44 2.74
3966 4100 3.557054 CCTGTTTTAGTCTGCAGGCTACA 60.557 47.826 27.29 22.50 41.46 2.74
3967 4101 3.003480 CCTGTTTTAGTCTGCAGGCTAC 58.997 50.000 27.29 19.11 41.46 3.58
3968 4102 2.903784 TCCTGTTTTAGTCTGCAGGCTA 59.096 45.455 23.98 23.98 45.86 3.93
3969 4103 1.699634 TCCTGTTTTAGTCTGCAGGCT 59.300 47.619 26.44 26.44 45.86 4.58
3970 4104 2.185004 TCCTGTTTTAGTCTGCAGGC 57.815 50.000 11.28 11.28 45.86 4.85
3972 4106 3.937706 CAGGATCCTGTTTTAGTCTGCAG 59.062 47.826 30.55 7.63 39.10 4.41
3973 4107 3.869912 GCAGGATCCTGTTTTAGTCTGCA 60.870 47.826 36.32 0.00 45.24 4.41
3974 4108 2.680339 GCAGGATCCTGTTTTAGTCTGC 59.320 50.000 36.32 19.32 45.24 4.26
3975 4109 3.937706 CTGCAGGATCCTGTTTTAGTCTG 59.062 47.826 36.32 20.30 45.24 3.51
3976 4110 3.840666 TCTGCAGGATCCTGTTTTAGTCT 59.159 43.478 36.32 0.00 45.24 3.24
3977 4111 4.187694 CTCTGCAGGATCCTGTTTTAGTC 58.812 47.826 36.32 21.39 45.24 2.59
3978 4112 3.054802 CCTCTGCAGGATCCTGTTTTAGT 60.055 47.826 36.32 1.52 43.65 2.24
3979 4113 3.198635 TCCTCTGCAGGATCCTGTTTTAG 59.801 47.826 36.32 27.80 44.75 1.85
3980 4114 3.181329 TCCTCTGCAGGATCCTGTTTTA 58.819 45.455 36.32 21.68 44.75 1.52
3981 4115 1.988107 TCCTCTGCAGGATCCTGTTTT 59.012 47.619 36.32 3.93 44.75 2.43
3982 4116 1.661463 TCCTCTGCAGGATCCTGTTT 58.339 50.000 36.32 4.35 44.75 2.83
3983 4117 3.406442 TCCTCTGCAGGATCCTGTT 57.594 52.632 36.32 4.76 44.75 3.16
3991 4125 0.463620 GAGCCTACTTCCTCTGCAGG 59.536 60.000 15.13 4.45 42.01 4.85
3992 4126 1.484038 AGAGCCTACTTCCTCTGCAG 58.516 55.000 7.63 7.63 37.07 4.41
3993 4127 1.552337 CAAGAGCCTACTTCCTCTGCA 59.448 52.381 0.00 0.00 38.38 4.41
3994 4128 1.134551 CCAAGAGCCTACTTCCTCTGC 60.135 57.143 0.00 0.00 38.38 4.26
3995 4129 1.134551 GCCAAGAGCCTACTTCCTCTG 60.135 57.143 0.00 0.00 38.38 3.35
3996 4130 1.199615 GCCAAGAGCCTACTTCCTCT 58.800 55.000 0.00 0.00 40.00 3.69
3997 4131 1.134551 CAGCCAAGAGCCTACTTCCTC 60.135 57.143 0.00 0.00 45.47 3.71
3998 4132 0.908198 CAGCCAAGAGCCTACTTCCT 59.092 55.000 0.00 0.00 45.47 3.36
3999 4133 3.467776 CAGCCAAGAGCCTACTTCC 57.532 57.895 0.00 0.00 45.47 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.