Multiple sequence alignment - TraesCS4A01G048200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G048200 chr4A 100.000 5556 0 0 1 5556 38837107 38842662 0.000000e+00 10261.0
1 TraesCS4A01G048200 chr4D 90.956 5208 235 95 1 5055 426523163 426518039 0.000000e+00 6791.0
2 TraesCS4A01G048200 chr4D 91.589 107 6 3 5044 5148 426517858 426517753 1.610000e-30 145.0
3 TraesCS4A01G048200 chr4B 92.889 3389 157 38 1734 5060 522335751 522332385 0.000000e+00 4846.0
4 TraesCS4A01G048200 chr4B 86.213 1806 100 61 1 1751 522337529 522335818 0.000000e+00 1818.0
5 TraesCS4A01G048200 chr4B 92.553 94 5 2 5056 5148 522307809 522307717 3.490000e-27 134.0
6 TraesCS4A01G048200 chr7B 89.851 404 37 3 5148 5549 712770841 712771242 2.970000e-142 516.0
7 TraesCS4A01G048200 chr7B 86.842 114 10 4 5148 5259 659416638 659416528 7.560000e-24 122.0
8 TraesCS4A01G048200 chr5B 87.224 407 48 4 5144 5549 239275221 239274818 1.410000e-125 460.0
9 TraesCS4A01G048200 chr2B 87.013 385 48 2 5157 5540 165254016 165254399 3.070000e-117 433.0
10 TraesCS4A01G048200 chr2B 83.173 416 55 8 5148 5551 636487366 636487778 3.160000e-97 366.0
11 TraesCS4A01G048200 chr2B 82.586 379 56 9 5142 5513 800554634 800554259 5.370000e-85 326.0
12 TraesCS4A01G048200 chr2B 92.391 92 7 0 4162 4253 695834936 695835027 1.260000e-26 132.0
13 TraesCS4A01G048200 chr2B 89.247 93 10 0 4162 4254 467928507 467928599 3.520000e-22 117.0
14 TraesCS4A01G048200 chr3B 84.615 377 45 11 5146 5516 561669171 561668802 4.090000e-96 363.0
15 TraesCS4A01G048200 chrUn 80.541 370 59 9 5189 5551 43092356 43091993 7.090000e-69 272.0
16 TraesCS4A01G048200 chr7A 91.216 148 10 3 5148 5295 25958266 25958122 1.220000e-46 198.0
17 TraesCS4A01G048200 chr6B 93.548 93 6 0 4162 4254 684142582 684142674 7.510000e-29 139.0
18 TraesCS4A01G048200 chr6D 92.473 93 7 0 4162 4254 424179638 424179730 3.490000e-27 134.0
19 TraesCS4A01G048200 chr5A 92.473 93 7 0 4162 4254 430993856 430993948 3.490000e-27 134.0
20 TraesCS4A01G048200 chr3A 93.103 58 4 0 5144 5201 210580832 210580889 9.920000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G048200 chr4A 38837107 38842662 5555 False 10261 10261 100.0000 1 5556 1 chr4A.!!$F1 5555
1 TraesCS4A01G048200 chr4D 426517753 426523163 5410 True 3468 6791 91.2725 1 5148 2 chr4D.!!$R1 5147
2 TraesCS4A01G048200 chr4B 522332385 522337529 5144 True 3332 4846 89.5510 1 5060 2 chr4B.!!$R2 5059

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
353 395 0.027586 GTTGTTTATGCTAGGCGCGG 59.972 55.000 8.83 0.0 43.27 6.46 F
476 518 0.179108 CGGGATCAAGAAGGACGGAC 60.179 60.000 0.00 0.0 0.00 4.79 F
964 1079 0.833287 GGGGAGTGAGAAGCTGCATA 59.167 55.000 1.02 0.0 0.00 3.14 F
989 1104 0.944386 TTCGTGCTTTGAACCTCTGC 59.056 50.000 0.00 0.0 0.00 4.26 F
1636 1763 1.668419 CCTTGGTTAGAGCGGAATGG 58.332 55.000 0.00 0.0 0.00 3.16 F
3132 3386 1.433879 GTGGGTCGAGGATCTCACG 59.566 63.158 0.00 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2320 2570 2.842496 TGAGGCCATGATCTTCTGAAGT 59.158 45.455 16.43 4.95 0.00 3.01 R
2381 2633 4.519540 AGGGTTTTTCGACATGGAAATG 57.480 40.909 0.00 0.00 35.95 2.32 R
2597 2851 2.083774 GAAACTGCATGGACGGATGAA 58.916 47.619 0.00 0.00 0.00 2.57 R
2604 2858 2.508526 AGAAGTGGAAACTGCATGGAC 58.491 47.619 0.00 0.00 0.00 4.02 R
3417 3671 0.721718 GCCGTCCAATTCTCTTCACG 59.278 55.000 0.00 0.00 0.00 4.35 R
4604 4891 0.037139 AGAAGAGACAGCAGCAGCAG 60.037 55.000 3.17 0.00 45.49 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 4.322424 GGGCTCAACGGGTTTTTAATCAAT 60.322 41.667 0.00 0.00 0.00 2.57
75 76 0.832559 CCGTTATCCCCCTCCCTCTC 60.833 65.000 0.00 0.00 0.00 3.20
78 79 2.996470 TTATCCCCCTCCCTCTCGCG 62.996 65.000 0.00 0.00 0.00 5.87
80 81 4.517934 CCCCCTCCCTCTCGCGTA 62.518 72.222 5.77 0.00 0.00 4.42
81 82 2.441532 CCCCTCCCTCTCGCGTAA 60.442 66.667 5.77 0.00 0.00 3.18
84 85 1.546961 CCCTCCCTCTCGCGTAATAT 58.453 55.000 5.77 0.00 0.00 1.28
85 86 2.619849 CCCCTCCCTCTCGCGTAATATA 60.620 54.545 5.77 0.00 0.00 0.86
86 87 3.087031 CCCTCCCTCTCGCGTAATATAA 58.913 50.000 5.77 0.00 0.00 0.98
87 88 3.128938 CCCTCCCTCTCGCGTAATATAAG 59.871 52.174 5.77 0.00 0.00 1.73
88 89 3.757493 CCTCCCTCTCGCGTAATATAAGT 59.243 47.826 5.77 0.00 0.00 2.24
132 150 1.023513 ACAAGGCTGCGAGATCTTGC 61.024 55.000 25.66 25.66 39.92 4.01
221 249 2.274645 CGTTGCCTCCCCATTTGCA 61.275 57.895 0.00 0.00 0.00 4.08
227 255 1.748591 GCCTCCCCATTTGCACTAGAG 60.749 57.143 0.00 0.00 0.00 2.43
283 324 5.613358 AAATCTCGGCTAACTCTGTTTTG 57.387 39.130 0.00 0.00 0.00 2.44
293 335 2.874849 ACTCTGTTTTGCCGTTGTTTG 58.125 42.857 0.00 0.00 0.00 2.93
332 374 0.914417 TGGGAGGAGGAATGTGGACC 60.914 60.000 0.00 0.00 0.00 4.46
333 375 1.522569 GGAGGAGGAATGTGGACCG 59.477 63.158 0.00 0.00 0.00 4.79
353 395 0.027586 GTTGTTTATGCTAGGCGCGG 59.972 55.000 8.83 0.00 43.27 6.46
356 398 4.961511 TTATGCTAGGCGCGGGCG 62.962 66.667 18.90 8.99 43.27 6.13
394 436 2.275318 CCTGCGTGATTCTTTCTCTCC 58.725 52.381 0.00 0.00 0.00 3.71
452 494 6.693113 GGAAATTTATTGCGGAAGATCTCAAC 59.307 38.462 0.00 0.00 0.00 3.18
455 497 0.391130 TTGCGGAAGATCTCAACCCG 60.391 55.000 16.57 16.57 42.74 5.28
473 515 1.521681 GCCGGGATCAAGAAGGACG 60.522 63.158 2.18 0.00 0.00 4.79
474 516 1.144057 CCGGGATCAAGAAGGACGG 59.856 63.158 0.00 0.00 0.00 4.79
475 517 1.327690 CCGGGATCAAGAAGGACGGA 61.328 60.000 0.00 0.00 42.19 4.69
476 518 0.179108 CGGGATCAAGAAGGACGGAC 60.179 60.000 0.00 0.00 0.00 4.79
496 538 4.750598 GGACAGGCGGATTAAGAAATAGAC 59.249 45.833 0.00 0.00 0.00 2.59
553 598 2.904866 TGCTTTGTGGGTGTCCGC 60.905 61.111 0.00 0.00 43.64 5.54
720 787 4.996113 GCACGTTGCCATATTCCG 57.004 55.556 0.00 0.00 37.42 4.30
807 883 1.593196 CTGTTTCTTTGCCGTCTGGA 58.407 50.000 0.00 0.00 37.49 3.86
822 898 1.533033 TGGACTCTGGAGCCGTTGA 60.533 57.895 0.00 0.00 0.00 3.18
873 953 2.348666 GGTTAGCATAGCACACAAGTCG 59.651 50.000 0.00 0.00 0.00 4.18
908 1000 4.320456 CTGCGGTGGTGGTCTGCT 62.320 66.667 0.00 0.00 37.96 4.24
910 1002 4.008933 GCGGTGGTGGTCTGCTCT 62.009 66.667 0.00 0.00 34.72 4.09
911 1003 2.047844 CGGTGGTGGTCTGCTCTG 60.048 66.667 0.00 0.00 0.00 3.35
912 1004 2.359230 GGTGGTGGTCTGCTCTGC 60.359 66.667 0.00 0.00 0.00 4.26
942 1057 2.126346 GTGAGCGCATTGTTGGCC 60.126 61.111 11.47 0.00 0.00 5.36
943 1058 2.282391 TGAGCGCATTGTTGGCCT 60.282 55.556 11.47 0.00 0.00 5.19
944 1059 2.180017 GAGCGCATTGTTGGCCTG 59.820 61.111 11.47 0.00 0.00 4.85
945 1060 3.346631 GAGCGCATTGTTGGCCTGG 62.347 63.158 11.47 0.00 0.00 4.45
946 1061 4.440127 GCGCATTGTTGGCCTGGG 62.440 66.667 3.32 2.52 0.00 4.45
947 1062 3.762247 CGCATTGTTGGCCTGGGG 61.762 66.667 3.32 0.00 0.00 4.96
948 1063 3.393106 GCATTGTTGGCCTGGGGG 61.393 66.667 3.32 0.00 0.00 5.40
949 1064 2.444696 CATTGTTGGCCTGGGGGA 59.555 61.111 3.32 0.00 33.58 4.81
950 1065 1.683365 CATTGTTGGCCTGGGGGAG 60.683 63.158 3.32 0.00 33.58 4.30
951 1066 2.169810 ATTGTTGGCCTGGGGGAGT 61.170 57.895 3.32 0.00 33.58 3.85
952 1067 2.445492 ATTGTTGGCCTGGGGGAGTG 62.445 60.000 3.32 0.00 33.58 3.51
953 1068 3.256960 GTTGGCCTGGGGGAGTGA 61.257 66.667 3.32 0.00 33.58 3.41
954 1069 2.935481 TTGGCCTGGGGGAGTGAG 60.935 66.667 3.32 0.00 33.58 3.51
955 1070 3.498961 TTGGCCTGGGGGAGTGAGA 62.499 63.158 3.32 0.00 33.58 3.27
956 1071 2.610859 GGCCTGGGGGAGTGAGAA 60.611 66.667 0.00 0.00 33.58 2.87
957 1072 2.674220 GGCCTGGGGGAGTGAGAAG 61.674 68.421 0.00 0.00 33.58 2.85
958 1073 2.993853 CCTGGGGGAGTGAGAAGC 59.006 66.667 0.00 0.00 33.58 3.86
959 1074 1.614824 CCTGGGGGAGTGAGAAGCT 60.615 63.158 0.00 0.00 33.58 3.74
960 1075 1.601171 CTGGGGGAGTGAGAAGCTG 59.399 63.158 0.00 0.00 0.00 4.24
961 1076 2.270527 GGGGGAGTGAGAAGCTGC 59.729 66.667 0.00 0.00 0.00 5.25
962 1077 2.596851 GGGGGAGTGAGAAGCTGCA 61.597 63.158 1.02 0.00 0.00 4.41
963 1078 1.606531 GGGGAGTGAGAAGCTGCAT 59.393 57.895 1.02 0.00 0.00 3.96
964 1079 0.833287 GGGGAGTGAGAAGCTGCATA 59.167 55.000 1.02 0.00 0.00 3.14
965 1080 1.419387 GGGGAGTGAGAAGCTGCATAT 59.581 52.381 1.02 0.00 0.00 1.78
966 1081 2.158696 GGGGAGTGAGAAGCTGCATATT 60.159 50.000 1.02 0.00 0.00 1.28
989 1104 0.944386 TTCGTGCTTTGAACCTCTGC 59.056 50.000 0.00 0.00 0.00 4.26
1084 1199 2.707791 TGAGTGATCCATTCATCCCTCC 59.292 50.000 0.00 0.00 36.54 4.30
1085 1200 2.039613 GAGTGATCCATTCATCCCTCCC 59.960 54.545 0.00 0.00 36.54 4.30
1110 1226 3.005684 TGCATGTTCATTCACCTTGTTCC 59.994 43.478 0.00 0.00 0.00 3.62
1164 1284 4.063689 CTCTGGATCAGCATACAACCATC 58.936 47.826 0.00 0.00 0.00 3.51
1169 1289 3.266510 TCAGCATACAACCATCTCACC 57.733 47.619 0.00 0.00 0.00 4.02
1191 1317 7.280652 TCACCGCTTATTGGTTTTAGGTATTAC 59.719 37.037 0.00 0.00 37.72 1.89
1283 1409 7.433680 TCTGTCGAGCTTTAGCATATGAATTA 58.566 34.615 6.97 0.00 45.16 1.40
1286 1412 7.382488 TGTCGAGCTTTAGCATATGAATTACTC 59.618 37.037 6.97 4.68 45.16 2.59
1287 1413 6.868864 TCGAGCTTTAGCATATGAATTACTCC 59.131 38.462 6.97 0.00 45.16 3.85
1288 1414 6.646653 CGAGCTTTAGCATATGAATTACTCCA 59.353 38.462 6.97 0.00 45.16 3.86
1289 1415 7.148672 CGAGCTTTAGCATATGAATTACTCCAG 60.149 40.741 6.97 0.00 45.16 3.86
1290 1416 7.512992 AGCTTTAGCATATGAATTACTCCAGT 58.487 34.615 6.97 0.00 45.16 4.00
1291 1417 7.659390 AGCTTTAGCATATGAATTACTCCAGTC 59.341 37.037 6.97 0.00 45.16 3.51
1309 1435 6.017192 TCCAGTCATATAGAGGGACCATAAC 58.983 44.000 0.00 0.00 31.99 1.89
1345 1472 3.609175 CGGACAACCAGCATAAACAACTG 60.609 47.826 0.00 0.00 35.59 3.16
1349 1476 2.944129 ACCAGCATAAACAACTGTGGT 58.056 42.857 0.00 0.00 31.86 4.16
1350 1477 2.884639 ACCAGCATAAACAACTGTGGTC 59.115 45.455 0.00 0.00 30.94 4.02
1368 1495 7.280205 ACTGTGGTCTCTTGTTTAGTTTTGTAG 59.720 37.037 0.00 0.00 0.00 2.74
1369 1496 7.107542 TGTGGTCTCTTGTTTAGTTTTGTAGT 58.892 34.615 0.00 0.00 0.00 2.73
1370 1497 8.259411 TGTGGTCTCTTGTTTAGTTTTGTAGTA 58.741 33.333 0.00 0.00 0.00 1.82
1427 1554 4.891168 TCCTTAAGGGTCAAAGTTCAAACC 59.109 41.667 21.53 0.00 36.25 3.27
1636 1763 1.668419 CCTTGGTTAGAGCGGAATGG 58.332 55.000 0.00 0.00 0.00 3.16
1744 1871 2.919602 TCCAAGTGCCTAAAGGGATTCT 59.080 45.455 0.00 0.00 38.01 2.40
1780 1991 5.546526 TGGAAGTGATTTTAAAATGGTGCC 58.453 37.500 17.98 10.19 0.00 5.01
1794 2005 4.961438 ATGGTGCCTCATTTGAAGTTTT 57.039 36.364 0.00 0.00 0.00 2.43
1799 2010 4.207019 GTGCCTCATTTGAAGTTTTTGACG 59.793 41.667 0.00 0.00 0.00 4.35
1801 2012 5.221224 TGCCTCATTTGAAGTTTTTGACGAT 60.221 36.000 0.00 0.00 0.00 3.73
1988 2213 5.271598 TGTGCATTCCCCATCTCTTTAAAT 58.728 37.500 0.00 0.00 0.00 1.40
2041 2267 4.642437 TCCACTCATAGCAACAACAACAAA 59.358 37.500 0.00 0.00 0.00 2.83
2076 2326 6.777580 ACAAAATACTGTCTTGTCCTTCCAAT 59.222 34.615 0.00 0.00 0.00 3.16
2077 2327 7.287696 ACAAAATACTGTCTTGTCCTTCCAATT 59.712 33.333 0.00 0.00 0.00 2.32
2088 2338 9.258629 TCTTGTCCTTCCAATTTATCAAATGAT 57.741 29.630 1.01 1.01 38.51 2.45
2093 2343 9.486123 TCCTTCCAATTTATCAAATGATTACCA 57.514 29.630 0.55 0.00 36.05 3.25
2127 2377 6.323203 AGATATAACATGATTGCAGTTGCC 57.677 37.500 0.00 0.00 41.18 4.52
2381 2633 6.208797 ACTTTTGGTTAGCAACTTATTCTCCC 59.791 38.462 0.00 0.00 0.00 4.30
2391 2643 5.127682 GCAACTTATTCTCCCATTTCCATGT 59.872 40.000 0.00 0.00 0.00 3.21
2407 2659 3.816523 TCCATGTCGAAAAACCCTTGTAC 59.183 43.478 0.00 0.00 0.00 2.90
2409 2661 3.278668 TGTCGAAAAACCCTTGTACCA 57.721 42.857 0.00 0.00 0.00 3.25
2423 2675 7.238710 ACCCTTGTACCATGTTCTTTTTATCT 58.761 34.615 0.00 0.00 0.00 1.98
2466 2718 9.485206 GTGGTTTCACTCAAGTTAGTCTATTAA 57.515 33.333 0.00 0.00 40.58 1.40
2497 2749 6.150976 GGTATGGAGTTCACACAATTCATTGA 59.849 38.462 6.53 0.00 40.14 2.57
2571 2825 8.609176 GCACTGTTATATTTTCTAACGGAATGA 58.391 33.333 8.58 0.00 37.56 2.57
2679 2933 7.054124 TCCCAACTACTGGTGATGAAAATATC 58.946 38.462 0.00 0.00 44.76 1.63
2772 3026 2.742053 GGTTGTCACACTCAATGCGTAT 59.258 45.455 0.00 0.00 0.00 3.06
2976 3230 3.019564 GGTTAGCCACTGCATTGATTCT 58.980 45.455 5.49 2.66 41.13 2.40
3097 3351 1.743252 GGAGTCAAGAAGCAGCCGG 60.743 63.158 0.00 0.00 0.00 6.13
3132 3386 1.433879 GTGGGTCGAGGATCTCACG 59.566 63.158 0.00 0.00 0.00 4.35
3186 3440 4.660789 ATCAGCTATCAAAACAATGGGC 57.339 40.909 0.00 0.00 0.00 5.36
3417 3671 2.093553 AGAGATGTGCAGGAAAGAGCTC 60.094 50.000 5.27 5.27 0.00 4.09
3459 3713 1.215647 GGATGAAGCGTCCGTGTCT 59.784 57.895 0.00 0.00 29.33 3.41
3631 3885 6.598850 TGCATCTATGATCACAGTAGCAAAAA 59.401 34.615 16.70 0.00 0.00 1.94
3669 3923 1.228124 CGAGGTTGCAAAGGACCCA 60.228 57.895 0.00 0.00 36.57 4.51
3807 4086 3.566742 TCATCATCTGCATGTACATTGCC 59.433 43.478 20.37 8.66 0.00 4.52
3880 4159 7.869800 TCTGAATTGTTGCTGTTTTTGTTTTT 58.130 26.923 0.00 0.00 0.00 1.94
3928 4207 3.134623 TCCTGTCATCGCAACCAATATCT 59.865 43.478 0.00 0.00 0.00 1.98
3929 4208 4.343814 TCCTGTCATCGCAACCAATATCTA 59.656 41.667 0.00 0.00 0.00 1.98
3930 4209 5.012046 TCCTGTCATCGCAACCAATATCTAT 59.988 40.000 0.00 0.00 0.00 1.98
3931 4210 5.121298 CCTGTCATCGCAACCAATATCTATG 59.879 44.000 0.00 0.00 0.00 2.23
4159 4446 1.525995 AACCGTGGTTCAGGTGCTG 60.526 57.895 0.00 0.00 41.21 4.41
4255 4542 4.643387 AGGTCAGGCGCCACAACC 62.643 66.667 31.54 29.40 0.00 3.77
4602 4889 0.895559 GTGCTGGGGTTTTAGCTGCT 60.896 55.000 7.57 7.57 40.52 4.24
4603 4890 0.895100 TGCTGGGGTTTTAGCTGCTG 60.895 55.000 13.43 0.00 40.52 4.41
4604 4891 1.885871 CTGGGGTTTTAGCTGCTGC 59.114 57.895 13.43 7.62 40.05 5.25
4765 5056 1.347707 CCTGTGAGACCTTTGGTGCTA 59.652 52.381 0.00 0.00 35.25 3.49
4786 5077 2.812011 ACTGTGAGGTTTTATGCCGTTC 59.188 45.455 0.00 0.00 0.00 3.95
4810 5102 7.179966 TCACTCACTCCTGGTAGTTATAAGAA 58.820 38.462 0.00 0.00 0.00 2.52
4815 5107 5.364157 ACTCCTGGTAGTTATAAGAAGCCTG 59.636 44.000 0.00 0.00 0.00 4.85
4839 5131 3.630312 TGTGTTTGGACCTTAAGTTGCTC 59.370 43.478 0.97 0.00 0.00 4.26
4847 5139 1.545428 CCTTAAGTTGCTCTGGCCACA 60.545 52.381 0.00 0.00 36.68 4.17
4870 5162 3.301007 GCGACGACGTGATTTTAGATCAC 60.301 47.826 4.58 5.88 43.55 3.06
4933 5251 4.878397 CAGATTAGCAGGTTTGGGTTAGAG 59.122 45.833 0.00 0.00 0.00 2.43
4941 5259 5.475564 GCAGGTTTGGGTTAGAGACAAAATA 59.524 40.000 0.00 0.00 36.05 1.40
5003 5321 1.396996 GCATCGGCAAAACGTATCACT 59.603 47.619 0.00 0.00 40.72 3.41
5014 5332 8.662141 GGCAAAACGTATCACTCTAAGAAATTA 58.338 33.333 0.00 0.00 0.00 1.40
5015 5333 9.690434 GCAAAACGTATCACTCTAAGAAATTAG 57.310 33.333 0.00 0.00 0.00 1.73
5114 5626 5.721480 TGGACCATTTCTTGATCTAGAGTGA 59.279 40.000 17.10 6.41 0.00 3.41
5116 5628 7.092712 TGGACCATTTCTTGATCTAGAGTGAAT 60.093 37.037 17.10 8.97 0.00 2.57
5174 5686 9.799106 TTTTTCTTGAAAGAGAAGGTAGATCAT 57.201 29.630 0.00 0.00 37.01 2.45
5175 5687 8.783833 TTTCTTGAAAGAGAAGGTAGATCATG 57.216 34.615 0.00 0.00 37.01 3.07
5176 5688 7.724490 TCTTGAAAGAGAAGGTAGATCATGA 57.276 36.000 0.00 0.00 0.00 3.07
5177 5689 8.316497 TCTTGAAAGAGAAGGTAGATCATGAT 57.684 34.615 8.25 8.25 0.00 2.45
5178 5690 8.420222 TCTTGAAAGAGAAGGTAGATCATGATC 58.580 37.037 25.42 25.42 38.09 2.92
5180 5692 9.426534 TTGAAAGAGAAGGTAGATCATGATCTA 57.573 33.333 32.49 32.49 45.69 1.98
5193 5705 7.914859 AGATCATGATCTACCTTATGCATTCA 58.085 34.615 32.26 0.00 45.69 2.57
5194 5706 8.380867 AGATCATGATCTACCTTATGCATTCAA 58.619 33.333 32.26 0.00 45.69 2.69
5195 5707 8.929260 ATCATGATCTACCTTATGCATTCAAA 57.071 30.769 3.54 0.00 0.00 2.69
5196 5708 8.750515 TCATGATCTACCTTATGCATTCAAAA 57.249 30.769 3.54 0.00 0.00 2.44
5197 5709 8.623903 TCATGATCTACCTTATGCATTCAAAAC 58.376 33.333 3.54 0.00 0.00 2.43
5198 5710 7.015226 TGATCTACCTTATGCATTCAAAACG 57.985 36.000 3.54 0.00 0.00 3.60
5199 5711 5.811399 TCTACCTTATGCATTCAAAACGG 57.189 39.130 3.54 0.00 0.00 4.44
5200 5712 3.866883 ACCTTATGCATTCAAAACGGG 57.133 42.857 3.54 0.00 0.00 5.28
5201 5713 2.495669 ACCTTATGCATTCAAAACGGGG 59.504 45.455 3.54 0.00 0.00 5.73
5202 5714 2.539476 CTTATGCATTCAAAACGGGGC 58.461 47.619 3.54 0.00 0.00 5.80
5203 5715 1.550327 TATGCATTCAAAACGGGGCA 58.450 45.000 3.54 0.00 35.54 5.36
5204 5716 0.683973 ATGCATTCAAAACGGGGCAA 59.316 45.000 0.00 0.00 34.64 4.52
5205 5717 0.465705 TGCATTCAAAACGGGGCAAA 59.534 45.000 0.00 0.00 0.00 3.68
5206 5718 1.134401 TGCATTCAAAACGGGGCAAAA 60.134 42.857 0.00 0.00 0.00 2.44
5207 5719 1.943340 GCATTCAAAACGGGGCAAAAA 59.057 42.857 0.00 0.00 0.00 1.94
5223 5735 2.801077 AAAAACCCGGATACCAGGAG 57.199 50.000 0.73 0.00 0.00 3.69
5224 5736 1.665137 AAAACCCGGATACCAGGAGT 58.335 50.000 0.73 0.00 0.00 3.85
5225 5737 1.201424 AAACCCGGATACCAGGAGTC 58.799 55.000 0.73 0.00 0.00 3.36
5226 5738 0.042131 AACCCGGATACCAGGAGTCA 59.958 55.000 0.73 0.00 0.00 3.41
5227 5739 0.264955 ACCCGGATACCAGGAGTCAT 59.735 55.000 0.73 0.00 0.00 3.06
5228 5740 1.502039 ACCCGGATACCAGGAGTCATA 59.498 52.381 0.73 0.00 0.00 2.15
5229 5741 2.111972 ACCCGGATACCAGGAGTCATAT 59.888 50.000 0.73 0.00 0.00 1.78
5230 5742 3.173965 CCCGGATACCAGGAGTCATATT 58.826 50.000 0.73 0.00 0.00 1.28
5231 5743 4.202749 ACCCGGATACCAGGAGTCATATTA 60.203 45.833 0.73 0.00 0.00 0.98
5232 5744 4.159879 CCCGGATACCAGGAGTCATATTAC 59.840 50.000 0.73 0.00 0.00 1.89
5233 5745 4.770531 CCGGATACCAGGAGTCATATTACA 59.229 45.833 0.00 0.00 0.00 2.41
5234 5746 5.422331 CCGGATACCAGGAGTCATATTACAT 59.578 44.000 0.00 0.00 0.00 2.29
5235 5747 6.333416 CGGATACCAGGAGTCATATTACATG 58.667 44.000 0.00 0.00 0.00 3.21
5236 5748 6.152831 CGGATACCAGGAGTCATATTACATGA 59.847 42.308 0.00 0.00 0.00 3.07
5237 5749 7.309805 CGGATACCAGGAGTCATATTACATGAA 60.310 40.741 0.00 0.00 0.00 2.57
5238 5750 8.037758 GGATACCAGGAGTCATATTACATGAAG 58.962 40.741 0.00 0.00 0.00 3.02
5239 5751 6.179906 ACCAGGAGTCATATTACATGAAGG 57.820 41.667 0.00 0.00 0.00 3.46
5240 5752 5.667626 ACCAGGAGTCATATTACATGAAGGT 59.332 40.000 0.00 0.00 0.00 3.50
5241 5753 5.994054 CCAGGAGTCATATTACATGAAGGTG 59.006 44.000 0.00 0.00 0.00 4.00
5242 5754 5.994054 CAGGAGTCATATTACATGAAGGTGG 59.006 44.000 0.00 0.00 0.00 4.61
5243 5755 5.667626 AGGAGTCATATTACATGAAGGTGGT 59.332 40.000 0.00 0.00 0.00 4.16
5244 5756 5.760253 GGAGTCATATTACATGAAGGTGGTG 59.240 44.000 0.00 0.00 0.00 4.17
5245 5757 6.313519 AGTCATATTACATGAAGGTGGTGT 57.686 37.500 0.00 0.00 0.00 4.16
5246 5758 6.115446 AGTCATATTACATGAAGGTGGTGTG 58.885 40.000 0.00 0.00 0.00 3.82
5247 5759 5.296780 GTCATATTACATGAAGGTGGTGTGG 59.703 44.000 0.00 0.00 0.00 4.17
5248 5760 2.577606 TTACATGAAGGTGGTGTGGG 57.422 50.000 0.00 0.00 0.00 4.61
5249 5761 0.037590 TACATGAAGGTGGTGTGGGC 59.962 55.000 0.00 0.00 0.00 5.36
5250 5762 1.228521 CATGAAGGTGGTGTGGGCA 60.229 57.895 0.00 0.00 0.00 5.36
5251 5763 1.228552 ATGAAGGTGGTGTGGGCAC 60.229 57.895 0.00 0.00 44.53 5.01
5252 5764 2.005606 ATGAAGGTGGTGTGGGCACA 62.006 55.000 0.00 0.00 46.95 4.57
5253 5765 1.454847 GAAGGTGGTGTGGGCACAA 60.455 57.895 0.00 0.00 46.95 3.33
5260 5772 2.044551 TGTGGGCACAACACAGCA 60.045 55.556 0.00 0.00 43.35 4.41
5261 5773 1.455402 TGTGGGCACAACACAGCAT 60.455 52.632 0.00 0.00 43.35 3.79
5262 5774 1.007038 GTGGGCACAACACAGCATG 60.007 57.895 0.00 0.00 46.00 4.06
5276 5788 3.755628 CATGTGCAGCAGGCCACC 61.756 66.667 5.01 0.00 43.89 4.61
5277 5789 4.289101 ATGTGCAGCAGGCCACCA 62.289 61.111 5.01 0.00 43.89 4.17
5282 5794 2.987547 CAGCAGGCCACCACCAAG 60.988 66.667 5.01 0.00 0.00 3.61
5283 5795 4.982701 AGCAGGCCACCACCAAGC 62.983 66.667 5.01 0.00 34.33 4.01
5287 5799 2.044946 GGCCACCACCAAGCCTAG 60.045 66.667 0.00 0.00 43.62 3.02
5288 5800 2.044946 GCCACCACCAAGCCTAGG 60.045 66.667 3.67 3.67 0.00 3.02
5289 5801 2.044946 CCACCACCAAGCCTAGGC 60.045 66.667 27.19 27.19 42.33 3.93
5290 5802 2.756400 CACCACCAAGCCTAGGCA 59.244 61.111 34.70 0.00 44.88 4.75
5291 5803 1.377725 CACCACCAAGCCTAGGCAG 60.378 63.158 34.70 25.15 44.88 4.85
5292 5804 2.273449 CCACCAAGCCTAGGCAGG 59.727 66.667 34.70 33.34 45.77 4.85
5293 5805 2.300967 CCACCAAGCCTAGGCAGGA 61.301 63.158 37.56 0.00 45.91 3.86
5294 5806 1.685224 CACCAAGCCTAGGCAGGAA 59.315 57.895 37.56 0.00 45.91 3.36
5295 5807 0.038166 CACCAAGCCTAGGCAGGAAA 59.962 55.000 37.56 0.00 45.91 3.13
5296 5808 0.777446 ACCAAGCCTAGGCAGGAAAA 59.223 50.000 37.56 0.00 45.91 2.29
5297 5809 1.146982 ACCAAGCCTAGGCAGGAAAAA 59.853 47.619 37.56 0.00 45.91 1.94
5320 5832 8.844865 AAAATGAAAATAGAGGGAATTAGGCT 57.155 30.769 0.00 0.00 0.00 4.58
5321 5833 8.844865 AAATGAAAATAGAGGGAATTAGGCTT 57.155 30.769 0.00 0.00 0.00 4.35
5322 5834 9.936329 AAATGAAAATAGAGGGAATTAGGCTTA 57.064 29.630 0.00 0.00 0.00 3.09
5323 5835 9.579932 AATGAAAATAGAGGGAATTAGGCTTAG 57.420 33.333 0.00 0.00 0.00 2.18
5324 5836 8.331931 TGAAAATAGAGGGAATTAGGCTTAGA 57.668 34.615 0.00 0.00 0.00 2.10
5325 5837 8.432805 TGAAAATAGAGGGAATTAGGCTTAGAG 58.567 37.037 0.00 0.00 0.00 2.43
5326 5838 8.568617 AAAATAGAGGGAATTAGGCTTAGAGA 57.431 34.615 0.00 0.00 0.00 3.10
5327 5839 8.568617 AAATAGAGGGAATTAGGCTTAGAGAA 57.431 34.615 0.00 0.00 0.00 2.87
5328 5840 8.568617 AATAGAGGGAATTAGGCTTAGAGAAA 57.431 34.615 0.00 0.00 0.00 2.52
5329 5841 6.893020 AGAGGGAATTAGGCTTAGAGAAAA 57.107 37.500 0.00 0.00 0.00 2.29
5330 5842 7.272144 AGAGGGAATTAGGCTTAGAGAAAAA 57.728 36.000 0.00 0.00 0.00 1.94
5331 5843 7.342581 AGAGGGAATTAGGCTTAGAGAAAAAG 58.657 38.462 0.00 0.00 0.00 2.27
5332 5844 7.182930 AGAGGGAATTAGGCTTAGAGAAAAAGA 59.817 37.037 0.00 0.00 0.00 2.52
5333 5845 7.342581 AGGGAATTAGGCTTAGAGAAAAAGAG 58.657 38.462 0.00 0.00 0.00 2.85
5334 5846 6.038825 GGGAATTAGGCTTAGAGAAAAAGAGC 59.961 42.308 0.00 0.00 0.00 4.09
5335 5847 6.599638 GGAATTAGGCTTAGAGAAAAAGAGCA 59.400 38.462 0.00 0.00 35.12 4.26
5336 5848 7.201688 GGAATTAGGCTTAGAGAAAAAGAGCAG 60.202 40.741 0.00 0.00 35.12 4.24
5337 5849 3.342719 AGGCTTAGAGAAAAAGAGCAGC 58.657 45.455 0.00 0.00 35.12 5.25
5338 5850 3.077359 GGCTTAGAGAAAAAGAGCAGCA 58.923 45.455 0.00 0.00 35.12 4.41
5339 5851 3.693578 GGCTTAGAGAAAAAGAGCAGCAT 59.306 43.478 0.00 0.00 35.12 3.79
5340 5852 4.878397 GGCTTAGAGAAAAAGAGCAGCATA 59.122 41.667 0.00 0.00 35.12 3.14
5341 5853 5.355350 GGCTTAGAGAAAAAGAGCAGCATAA 59.645 40.000 0.00 0.00 35.12 1.90
5342 5854 6.039159 GGCTTAGAGAAAAAGAGCAGCATAAT 59.961 38.462 0.00 0.00 35.12 1.28
5343 5855 7.416101 GGCTTAGAGAAAAAGAGCAGCATAATT 60.416 37.037 0.00 0.00 35.12 1.40
5344 5856 8.616076 GCTTAGAGAAAAAGAGCAGCATAATTA 58.384 33.333 0.00 0.00 33.68 1.40
5345 5857 9.928236 CTTAGAGAAAAAGAGCAGCATAATTAC 57.072 33.333 0.00 0.00 0.00 1.89
5346 5858 7.928307 AGAGAAAAAGAGCAGCATAATTACA 57.072 32.000 0.00 0.00 0.00 2.41
5347 5859 7.756558 AGAGAAAAAGAGCAGCATAATTACAC 58.243 34.615 0.00 0.00 0.00 2.90
5348 5860 7.391554 AGAGAAAAAGAGCAGCATAATTACACA 59.608 33.333 0.00 0.00 0.00 3.72
5349 5861 7.885297 AGAAAAAGAGCAGCATAATTACACAA 58.115 30.769 0.00 0.00 0.00 3.33
5350 5862 8.359642 AGAAAAAGAGCAGCATAATTACACAAA 58.640 29.630 0.00 0.00 0.00 2.83
5351 5863 8.524870 AAAAAGAGCAGCATAATTACACAAAG 57.475 30.769 0.00 0.00 0.00 2.77
5352 5864 6.824305 AAGAGCAGCATAATTACACAAAGT 57.176 33.333 0.00 0.00 0.00 2.66
5353 5865 7.921786 AAGAGCAGCATAATTACACAAAGTA 57.078 32.000 0.00 0.00 0.00 2.24
5354 5866 7.545362 AGAGCAGCATAATTACACAAAGTAG 57.455 36.000 0.00 0.00 33.43 2.57
5355 5867 6.037610 AGAGCAGCATAATTACACAAAGTAGC 59.962 38.462 0.00 0.00 33.43 3.58
5356 5868 5.882557 AGCAGCATAATTACACAAAGTAGCT 59.117 36.000 0.00 0.00 33.43 3.32
5357 5869 7.047891 AGCAGCATAATTACACAAAGTAGCTA 58.952 34.615 0.00 0.00 33.43 3.32
5358 5870 7.552687 AGCAGCATAATTACACAAAGTAGCTAA 59.447 33.333 0.00 0.00 33.43 3.09
5359 5871 8.181573 GCAGCATAATTACACAAAGTAGCTAAA 58.818 33.333 0.00 0.00 33.43 1.85
5368 5880 7.295952 ACACAAAGTAGCTAAATCTTGATCG 57.704 36.000 0.00 0.00 0.00 3.69
5369 5881 6.183360 ACACAAAGTAGCTAAATCTTGATCGC 60.183 38.462 0.00 0.00 0.00 4.58
5370 5882 5.005779 ACAAAGTAGCTAAATCTTGATCGCG 59.994 40.000 0.00 0.00 0.00 5.87
5371 5883 4.308899 AGTAGCTAAATCTTGATCGCGT 57.691 40.909 5.77 0.00 0.00 6.01
5372 5884 4.291783 AGTAGCTAAATCTTGATCGCGTC 58.708 43.478 5.77 3.66 0.00 5.19
5373 5885 2.120232 AGCTAAATCTTGATCGCGTCG 58.880 47.619 5.77 0.00 0.00 5.12
5374 5886 1.190323 GCTAAATCTTGATCGCGTCGG 59.810 52.381 5.77 1.04 0.00 4.79
5375 5887 1.787155 CTAAATCTTGATCGCGTCGGG 59.213 52.381 5.77 2.31 0.00 5.14
5376 5888 1.429148 AAATCTTGATCGCGTCGGGC 61.429 55.000 5.77 0.00 38.69 6.13
5377 5889 2.298158 AATCTTGATCGCGTCGGGCT 62.298 55.000 5.77 0.00 40.44 5.19
5378 5890 2.685387 ATCTTGATCGCGTCGGGCTC 62.685 60.000 5.77 5.28 40.44 4.70
5379 5891 3.417275 CTTGATCGCGTCGGGCTCT 62.417 63.158 5.77 0.00 40.44 4.09
5380 5892 2.060004 CTTGATCGCGTCGGGCTCTA 62.060 60.000 5.77 6.02 40.44 2.43
5381 5893 1.452953 TTGATCGCGTCGGGCTCTAT 61.453 55.000 5.77 0.00 40.44 1.98
5382 5894 1.442857 GATCGCGTCGGGCTCTATG 60.443 63.158 5.77 0.00 40.44 2.23
5383 5895 3.559657 ATCGCGTCGGGCTCTATGC 62.560 63.158 5.77 0.00 40.44 3.14
5384 5896 4.271816 CGCGTCGGGCTCTATGCT 62.272 66.667 0.00 0.00 42.39 3.79
5385 5897 2.107141 GCGTCGGGCTCTATGCTT 59.893 61.111 0.00 0.00 42.39 3.91
5386 5898 1.951631 GCGTCGGGCTCTATGCTTC 60.952 63.158 0.00 0.00 42.39 3.86
5387 5899 1.300233 CGTCGGGCTCTATGCTTCC 60.300 63.158 0.00 0.00 42.39 3.46
5388 5900 1.823295 GTCGGGCTCTATGCTTCCA 59.177 57.895 0.00 0.00 42.39 3.53
5389 5901 0.249657 GTCGGGCTCTATGCTTCCAG 60.250 60.000 0.00 0.00 42.39 3.86
5390 5902 0.397114 TCGGGCTCTATGCTTCCAGA 60.397 55.000 0.00 0.00 42.39 3.86
5391 5903 0.033228 CGGGCTCTATGCTTCCAGAG 59.967 60.000 0.00 0.00 42.39 3.35
5392 5904 1.418334 GGGCTCTATGCTTCCAGAGA 58.582 55.000 2.86 0.00 40.68 3.10
5393 5905 1.977129 GGGCTCTATGCTTCCAGAGAT 59.023 52.381 2.86 0.00 38.52 2.75
5394 5906 2.289569 GGGCTCTATGCTTCCAGAGATG 60.290 54.545 2.86 0.00 38.52 2.90
5395 5907 2.632028 GGCTCTATGCTTCCAGAGATGA 59.368 50.000 2.86 0.00 38.52 2.92
5396 5908 3.070734 GGCTCTATGCTTCCAGAGATGAA 59.929 47.826 2.86 0.00 38.52 2.57
5397 5909 4.309099 GCTCTATGCTTCCAGAGATGAAG 58.691 47.826 2.86 0.00 38.52 3.02
5398 5910 4.039004 GCTCTATGCTTCCAGAGATGAAGA 59.961 45.833 4.30 0.00 41.38 2.87
5399 5911 5.453057 GCTCTATGCTTCCAGAGATGAAGAA 60.453 44.000 4.30 0.00 41.38 2.52
5400 5912 6.159299 TCTATGCTTCCAGAGATGAAGAAG 57.841 41.667 4.30 0.00 41.38 2.85
5404 5916 4.468765 CTTCCAGAGATGAAGAAGCTGA 57.531 45.455 0.00 0.00 41.38 4.26
5405 5917 5.026038 CTTCCAGAGATGAAGAAGCTGAT 57.974 43.478 0.00 0.00 41.38 2.90
5406 5918 4.403585 TCCAGAGATGAAGAAGCTGATG 57.596 45.455 0.00 0.00 0.00 3.07
5407 5919 4.028825 TCCAGAGATGAAGAAGCTGATGA 58.971 43.478 0.00 0.00 0.00 2.92
5408 5920 4.468868 TCCAGAGATGAAGAAGCTGATGAA 59.531 41.667 0.00 0.00 0.00 2.57
5409 5921 5.130643 TCCAGAGATGAAGAAGCTGATGAAT 59.869 40.000 0.00 0.00 0.00 2.57
5410 5922 5.467399 CCAGAGATGAAGAAGCTGATGAATC 59.533 44.000 0.00 0.00 0.00 2.52
5411 5923 6.285224 CAGAGATGAAGAAGCTGATGAATCT 58.715 40.000 0.00 0.00 0.00 2.40
5412 5924 6.422701 CAGAGATGAAGAAGCTGATGAATCTC 59.577 42.308 15.87 15.87 39.25 2.75
5413 5925 6.098552 AGAGATGAAGAAGCTGATGAATCTCA 59.901 38.462 21.58 7.93 40.68 3.27
5414 5926 6.833041 AGATGAAGAAGCTGATGAATCTCAT 58.167 36.000 0.00 0.00 40.34 2.90
5415 5927 7.284074 AGATGAAGAAGCTGATGAATCTCATT 58.716 34.615 0.00 0.00 37.20 2.57
5416 5928 8.430431 AGATGAAGAAGCTGATGAATCTCATTA 58.570 33.333 0.00 0.00 37.20 1.90
5417 5929 8.975663 ATGAAGAAGCTGATGAATCTCATTAA 57.024 30.769 0.00 0.00 37.20 1.40
5418 5930 8.797350 TGAAGAAGCTGATGAATCTCATTAAA 57.203 30.769 0.00 0.00 37.20 1.52
5419 5931 9.234827 TGAAGAAGCTGATGAATCTCATTAAAA 57.765 29.630 0.00 0.00 37.20 1.52
5420 5932 9.719279 GAAGAAGCTGATGAATCTCATTAAAAG 57.281 33.333 0.00 0.00 37.20 2.27
5421 5933 7.705214 AGAAGCTGATGAATCTCATTAAAAGC 58.295 34.615 0.00 0.00 37.20 3.51
5422 5934 6.388435 AGCTGATGAATCTCATTAAAAGCC 57.612 37.500 0.00 0.00 37.20 4.35
5423 5935 5.301298 AGCTGATGAATCTCATTAAAAGCCC 59.699 40.000 0.00 0.00 37.20 5.19
5424 5936 5.755813 CTGATGAATCTCATTAAAAGCCCG 58.244 41.667 0.00 0.00 37.20 6.13
5425 5937 5.436175 TGATGAATCTCATTAAAAGCCCGA 58.564 37.500 0.00 0.00 37.20 5.14
5426 5938 5.528690 TGATGAATCTCATTAAAAGCCCGAG 59.471 40.000 0.00 0.00 37.20 4.63
5427 5939 5.097742 TGAATCTCATTAAAAGCCCGAGA 57.902 39.130 0.00 0.00 37.16 4.04
5428 5940 5.684704 TGAATCTCATTAAAAGCCCGAGAT 58.315 37.500 0.00 0.00 43.52 2.75
5429 5941 5.528690 TGAATCTCATTAAAAGCCCGAGATG 59.471 40.000 0.00 0.00 41.43 2.90
5430 5942 3.206150 TCTCATTAAAAGCCCGAGATGC 58.794 45.455 0.00 0.00 0.00 3.91
5431 5943 2.945008 CTCATTAAAAGCCCGAGATGCA 59.055 45.455 0.00 0.00 0.00 3.96
5432 5944 2.945008 TCATTAAAAGCCCGAGATGCAG 59.055 45.455 0.00 0.00 0.00 4.41
5433 5945 2.489938 TTAAAAGCCCGAGATGCAGT 57.510 45.000 0.00 0.00 0.00 4.40
5434 5946 2.024176 TAAAAGCCCGAGATGCAGTC 57.976 50.000 0.00 0.00 0.00 3.51
5435 5947 0.678048 AAAAGCCCGAGATGCAGTCC 60.678 55.000 0.00 0.00 0.00 3.85
5436 5948 1.841302 AAAGCCCGAGATGCAGTCCA 61.841 55.000 0.00 0.00 0.00 4.02
5437 5949 1.630126 AAGCCCGAGATGCAGTCCAT 61.630 55.000 0.00 0.00 36.70 3.41
5438 5950 1.890979 GCCCGAGATGCAGTCCATG 60.891 63.158 0.00 0.00 33.29 3.66
5439 5951 1.524002 CCCGAGATGCAGTCCATGT 59.476 57.895 0.00 0.00 33.29 3.21
5440 5952 0.531532 CCCGAGATGCAGTCCATGTC 60.532 60.000 0.00 0.00 40.01 3.06
5441 5953 0.463204 CCGAGATGCAGTCCATGTCT 59.537 55.000 0.00 0.00 40.94 3.41
5442 5954 1.537776 CCGAGATGCAGTCCATGTCTC 60.538 57.143 0.00 0.00 40.94 3.36
5443 5955 1.408340 CGAGATGCAGTCCATGTCTCT 59.592 52.381 9.02 0.00 40.94 3.10
5444 5956 2.798853 CGAGATGCAGTCCATGTCTCTG 60.799 54.545 9.02 5.52 40.94 3.35
5445 5957 2.168106 GAGATGCAGTCCATGTCTCTGT 59.832 50.000 4.36 0.00 40.19 3.41
5446 5958 2.168106 AGATGCAGTCCATGTCTCTGTC 59.832 50.000 0.00 2.97 33.29 3.51
5447 5959 0.610174 TGCAGTCCATGTCTCTGTCC 59.390 55.000 9.57 0.00 0.00 4.02
5448 5960 0.901124 GCAGTCCATGTCTCTGTCCT 59.099 55.000 9.57 0.00 0.00 3.85
5449 5961 1.405256 GCAGTCCATGTCTCTGTCCTG 60.405 57.143 9.57 0.00 0.00 3.86
5450 5962 2.174360 CAGTCCATGTCTCTGTCCTGA 58.826 52.381 0.00 0.00 0.00 3.86
5451 5963 2.564504 CAGTCCATGTCTCTGTCCTGAA 59.435 50.000 0.00 0.00 0.00 3.02
5452 5964 2.830923 AGTCCATGTCTCTGTCCTGAAG 59.169 50.000 0.00 0.00 0.00 3.02
5453 5965 2.828520 GTCCATGTCTCTGTCCTGAAGA 59.171 50.000 0.00 0.00 0.00 2.87
5454 5966 2.828520 TCCATGTCTCTGTCCTGAAGAC 59.171 50.000 0.00 0.00 46.51 3.01
5463 5975 2.663826 GTCCTGAAGACAAGAGCGAT 57.336 50.000 0.00 0.00 45.55 4.58
5464 5976 2.535331 GTCCTGAAGACAAGAGCGATC 58.465 52.381 0.00 0.00 45.55 3.69
5465 5977 1.478510 TCCTGAAGACAAGAGCGATCC 59.521 52.381 0.00 0.00 0.00 3.36
5466 5978 1.554392 CTGAAGACAAGAGCGATCCG 58.446 55.000 0.00 0.00 0.00 4.18
5467 5979 0.173481 TGAAGACAAGAGCGATCCGG 59.827 55.000 0.00 0.00 0.00 5.14
5468 5980 0.528684 GAAGACAAGAGCGATCCGGG 60.529 60.000 0.00 0.00 0.00 5.73
5469 5981 2.579684 AAGACAAGAGCGATCCGGGC 62.580 60.000 0.00 0.00 0.00 6.13
5470 5982 3.077556 ACAAGAGCGATCCGGGCT 61.078 61.111 0.00 1.38 45.00 5.19
5471 5983 2.587194 CAAGAGCGATCCGGGCTG 60.587 66.667 8.54 0.00 41.72 4.85
5472 5984 3.077556 AAGAGCGATCCGGGCTGT 61.078 61.111 8.54 1.45 41.72 4.40
5473 5985 3.082579 AAGAGCGATCCGGGCTGTC 62.083 63.158 8.54 0.00 41.72 3.51
5474 5986 4.593864 GAGCGATCCGGGCTGTCC 62.594 72.222 8.54 0.00 41.72 4.02
5476 5988 4.899239 GCGATCCGGGCTGTCCAG 62.899 72.222 0.00 0.00 34.36 3.86
5477 5989 3.147595 CGATCCGGGCTGTCCAGA 61.148 66.667 0.00 0.00 34.36 3.86
5478 5990 2.818132 GATCCGGGCTGTCCAGAG 59.182 66.667 0.00 0.00 34.36 3.35
5479 5991 1.758514 GATCCGGGCTGTCCAGAGA 60.759 63.158 0.00 0.00 34.36 3.10
5480 5992 1.743321 GATCCGGGCTGTCCAGAGAG 61.743 65.000 0.00 0.00 34.36 3.20
5481 5993 4.154347 CCGGGCTGTCCAGAGAGC 62.154 72.222 8.22 8.22 45.84 4.09
5486 5998 2.838286 GCTGTCCAGAGAGCAACTG 58.162 57.895 11.59 0.00 45.86 3.16
5487 5999 1.297456 GCTGTCCAGAGAGCAACTGC 61.297 60.000 11.59 0.00 45.86 4.40
5488 6000 0.034476 CTGTCCAGAGAGCAACTGCA 59.966 55.000 4.22 0.00 45.16 4.41
5489 6001 0.469494 TGTCCAGAGAGCAACTGCAA 59.531 50.000 4.22 0.00 45.16 4.08
5490 6002 1.072806 TGTCCAGAGAGCAACTGCAAT 59.927 47.619 4.22 0.00 45.16 3.56
5491 6003 1.736681 GTCCAGAGAGCAACTGCAATC 59.263 52.381 4.22 1.50 45.16 2.67
5492 6004 0.725686 CCAGAGAGCAACTGCAATCG 59.274 55.000 4.22 0.00 45.16 3.34
5493 6005 0.096628 CAGAGAGCAACTGCAATCGC 59.903 55.000 4.22 0.00 45.16 4.58
5494 6006 1.023513 AGAGAGCAACTGCAATCGCC 61.024 55.000 4.22 0.00 45.16 5.54
5495 6007 2.099062 GAGCAACTGCAATCGCCG 59.901 61.111 4.22 0.00 45.16 6.46
5496 6008 2.669569 AGCAACTGCAATCGCCGT 60.670 55.556 4.22 0.00 45.16 5.68
5497 6009 1.358725 GAGCAACTGCAATCGCCGTA 61.359 55.000 4.22 0.00 45.16 4.02
5498 6010 0.953471 AGCAACTGCAATCGCCGTAA 60.953 50.000 4.22 0.00 45.16 3.18
5499 6011 0.109964 GCAACTGCAATCGCCGTAAA 60.110 50.000 0.00 0.00 41.59 2.01
5500 6012 1.664588 GCAACTGCAATCGCCGTAAAA 60.665 47.619 0.00 0.00 41.59 1.52
5501 6013 2.241722 CAACTGCAATCGCCGTAAAAG 58.758 47.619 0.00 0.00 34.08 2.27
5502 6014 1.803334 ACTGCAATCGCCGTAAAAGA 58.197 45.000 0.00 0.00 33.33 2.52
5503 6015 1.732259 ACTGCAATCGCCGTAAAAGAG 59.268 47.619 0.00 0.00 33.33 2.85
5504 6016 1.999735 CTGCAATCGCCGTAAAAGAGA 59.000 47.619 0.00 0.00 37.32 3.10
5505 6017 2.415168 CTGCAATCGCCGTAAAAGAGAA 59.585 45.455 0.00 0.00 37.32 2.87
5506 6018 3.006940 TGCAATCGCCGTAAAAGAGAAT 58.993 40.909 0.00 0.00 37.32 2.40
5507 6019 3.181511 TGCAATCGCCGTAAAAGAGAATG 60.182 43.478 0.00 0.00 37.32 2.67
5508 6020 3.181510 GCAATCGCCGTAAAAGAGAATGT 60.182 43.478 0.00 0.00 0.00 2.71
5509 6021 4.334443 CAATCGCCGTAAAAGAGAATGTG 58.666 43.478 0.00 0.00 0.00 3.21
5510 6022 3.034721 TCGCCGTAAAAGAGAATGTGT 57.965 42.857 0.00 0.00 0.00 3.72
5511 6023 2.991190 TCGCCGTAAAAGAGAATGTGTC 59.009 45.455 0.00 0.00 0.00 3.67
5512 6024 2.734606 CGCCGTAAAAGAGAATGTGTCA 59.265 45.455 0.00 0.00 0.00 3.58
5513 6025 3.185594 CGCCGTAAAAGAGAATGTGTCAA 59.814 43.478 0.00 0.00 0.00 3.18
5514 6026 4.319190 CGCCGTAAAAGAGAATGTGTCAAA 60.319 41.667 0.00 0.00 0.00 2.69
5515 6027 5.147162 GCCGTAAAAGAGAATGTGTCAAAG 58.853 41.667 0.00 0.00 0.00 2.77
5516 6028 5.147162 CCGTAAAAGAGAATGTGTCAAAGC 58.853 41.667 0.00 0.00 0.00 3.51
5517 6029 5.049405 CCGTAAAAGAGAATGTGTCAAAGCT 60.049 40.000 0.00 0.00 0.00 3.74
5518 6030 6.430451 CGTAAAAGAGAATGTGTCAAAGCTT 58.570 36.000 0.00 0.00 0.00 3.74
5519 6031 6.358030 CGTAAAAGAGAATGTGTCAAAGCTTG 59.642 38.462 0.00 0.00 0.00 4.01
5520 6032 3.911661 AGAGAATGTGTCAAAGCTTGC 57.088 42.857 0.00 0.00 0.00 4.01
5521 6033 2.555757 AGAGAATGTGTCAAAGCTTGCC 59.444 45.455 0.00 0.00 0.00 4.52
5522 6034 1.267806 AGAATGTGTCAAAGCTTGCCG 59.732 47.619 0.00 0.00 0.00 5.69
5523 6035 1.001378 GAATGTGTCAAAGCTTGCCGT 60.001 47.619 0.00 0.00 0.00 5.68
5524 6036 1.890876 ATGTGTCAAAGCTTGCCGTA 58.109 45.000 0.00 0.00 0.00 4.02
5525 6037 0.941542 TGTGTCAAAGCTTGCCGTAC 59.058 50.000 0.00 0.00 0.00 3.67
5526 6038 0.110823 GTGTCAAAGCTTGCCGTACG 60.111 55.000 8.69 8.69 0.00 3.67
5527 6039 0.531090 TGTCAAAGCTTGCCGTACGT 60.531 50.000 15.21 0.00 0.00 3.57
5528 6040 1.269673 TGTCAAAGCTTGCCGTACGTA 60.270 47.619 15.21 0.00 0.00 3.57
5529 6041 1.389106 GTCAAAGCTTGCCGTACGTAG 59.611 52.381 15.21 9.46 0.00 3.51
5530 6042 0.094730 CAAAGCTTGCCGTACGTAGC 59.905 55.000 20.15 20.15 0.00 3.58
5531 6043 1.017701 AAAGCTTGCCGTACGTAGCC 61.018 55.000 22.56 10.87 34.19 3.93
5532 6044 2.125832 GCTTGCCGTACGTAGCCA 60.126 61.111 15.21 2.33 0.00 4.75
5533 6045 1.520787 GCTTGCCGTACGTAGCCAT 60.521 57.895 15.21 0.00 0.00 4.40
5534 6046 1.762222 GCTTGCCGTACGTAGCCATG 61.762 60.000 15.21 8.75 0.00 3.66
5535 6047 1.151777 CTTGCCGTACGTAGCCATGG 61.152 60.000 15.21 7.63 0.00 3.66
5536 6048 2.965462 GCCGTACGTAGCCATGGC 60.965 66.667 30.12 30.12 40.04 4.40
5537 6049 2.279918 CCGTACGTAGCCATGGCC 60.280 66.667 33.14 17.81 43.17 5.36
5538 6050 2.792947 CCGTACGTAGCCATGGCCT 61.793 63.158 33.14 21.61 43.17 5.19
5539 6051 1.299926 CGTACGTAGCCATGGCCTC 60.300 63.158 33.14 23.49 43.17 4.70
5540 6052 1.069258 GTACGTAGCCATGGCCTCC 59.931 63.158 33.14 19.26 43.17 4.30
5541 6053 2.495409 TACGTAGCCATGGCCTCCG 61.495 63.158 33.14 30.34 43.17 4.63
5543 6055 3.866582 GTAGCCATGGCCTCCGCT 61.867 66.667 33.14 16.11 43.17 5.52
5544 6056 3.865383 TAGCCATGGCCTCCGCTG 61.865 66.667 33.14 0.00 43.17 5.18
5547 6059 3.865383 CCATGGCCTCCGCTGCTA 61.865 66.667 3.32 0.00 34.44 3.49
5548 6060 2.190313 CATGGCCTCCGCTGCTAA 59.810 61.111 3.32 0.00 34.44 3.09
5549 6061 1.451927 CATGGCCTCCGCTGCTAAA 60.452 57.895 3.32 0.00 34.44 1.85
5550 6062 1.031571 CATGGCCTCCGCTGCTAAAA 61.032 55.000 3.32 0.00 34.44 1.52
5551 6063 0.323360 ATGGCCTCCGCTGCTAAAAA 60.323 50.000 3.32 0.00 34.44 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 2.173996 GGAGGGGGATAACGGAATTTGA 59.826 50.000 0.00 0.00 0.00 2.69
75 76 8.422973 AGAGATACTCCTACTTATATTACGCG 57.577 38.462 3.53 3.53 0.00 6.01
81 82 9.880157 GACGAAGAGAGATACTCCTACTTATAT 57.120 37.037 0.00 0.00 45.96 0.86
84 85 6.464180 GGGACGAAGAGAGATACTCCTACTTA 60.464 46.154 0.00 0.00 45.96 2.24
85 86 5.370679 GGACGAAGAGAGATACTCCTACTT 58.629 45.833 0.00 0.00 45.96 2.24
86 87 4.202388 GGGACGAAGAGAGATACTCCTACT 60.202 50.000 0.00 0.00 45.96 2.57
87 88 4.067192 GGGACGAAGAGAGATACTCCTAC 58.933 52.174 0.00 0.00 45.96 3.18
88 89 4.354893 GGGACGAAGAGAGATACTCCTA 57.645 50.000 0.00 0.00 45.96 2.94
132 150 0.249489 CGCGGGGAGGAATCTTGTAG 60.249 60.000 0.00 0.00 0.00 2.74
201 229 2.037208 AAATGGGGAGGCAACGGG 59.963 61.111 0.00 0.00 46.39 5.28
221 249 0.818296 ACGGCGCATCTTTCTCTAGT 59.182 50.000 10.83 0.00 0.00 2.57
227 255 1.421410 ATCGACACGGCGCATCTTTC 61.421 55.000 10.83 0.00 0.00 2.62
283 324 0.593128 ATCTCTGCACAAACAACGGC 59.407 50.000 0.00 0.00 0.00 5.68
293 335 3.265791 CAGACCCTACAAATCTCTGCAC 58.734 50.000 0.00 0.00 0.00 4.57
353 395 0.321653 AGGATCTTGTGTCCAACGCC 60.322 55.000 0.00 0.00 38.25 5.68
356 398 1.168714 GGCAGGATCTTGTGTCCAAC 58.831 55.000 6.70 0.00 38.25 3.77
416 458 0.032912 TAAATTTCCCTTCCCCCGCC 60.033 55.000 0.00 0.00 0.00 6.13
452 494 2.203070 CTTCTTGATCCCGGCGGG 60.203 66.667 38.92 38.92 46.11 6.13
455 497 1.521681 CGTCCTTCTTGATCCCGGC 60.522 63.158 0.00 0.00 0.00 6.13
473 515 4.750598 GTCTATTTCTTAATCCGCCTGTCC 59.249 45.833 0.00 0.00 0.00 4.02
474 516 5.357257 TGTCTATTTCTTAATCCGCCTGTC 58.643 41.667 0.00 0.00 0.00 3.51
475 517 5.353394 TGTCTATTTCTTAATCCGCCTGT 57.647 39.130 0.00 0.00 0.00 4.00
476 518 4.212214 GCTGTCTATTTCTTAATCCGCCTG 59.788 45.833 0.00 0.00 0.00 4.85
553 598 2.218115 TAAACAATGGCGGGGAGGGG 62.218 60.000 0.00 0.00 0.00 4.79
607 652 2.748251 TTATGCGGGGCGGTGTTG 60.748 61.111 0.00 0.00 0.00 3.33
608 653 1.901654 TACTTATGCGGGGCGGTGTT 61.902 55.000 0.00 0.00 0.00 3.32
609 654 2.306255 CTACTTATGCGGGGCGGTGT 62.306 60.000 0.00 0.00 0.00 4.16
614 659 1.227853 CACCCTACTTATGCGGGGC 60.228 63.158 0.00 0.00 42.44 5.80
669 736 3.016177 CGTACAACGGAAACAATAGCG 57.984 47.619 0.00 0.00 38.08 4.26
760 831 1.986882 AGGAACAGAAGCAACTTGGG 58.013 50.000 0.00 0.00 0.00 4.12
807 883 0.687354 AACATCAACGGCTCCAGAGT 59.313 50.000 0.00 0.00 0.00 3.24
822 898 0.328258 CTTGTCCGGGGAAGGAACAT 59.672 55.000 0.00 0.00 42.77 2.71
873 953 2.093711 GCAGGAGGAGGAAGAAGAAGAC 60.094 54.545 0.00 0.00 0.00 3.01
908 1000 0.033090 CACACACAGAGCAGAGCAGA 59.967 55.000 0.00 0.00 0.00 4.26
910 1002 0.033090 CTCACACACAGAGCAGAGCA 59.967 55.000 0.00 0.00 0.00 4.26
911 1003 2.824952 CTCACACACAGAGCAGAGC 58.175 57.895 0.00 0.00 0.00 4.09
942 1057 1.601171 CAGCTTCTCACTCCCCCAG 59.399 63.158 0.00 0.00 0.00 4.45
943 1058 2.596851 GCAGCTTCTCACTCCCCCA 61.597 63.158 0.00 0.00 0.00 4.96
944 1059 1.919600 ATGCAGCTTCTCACTCCCCC 61.920 60.000 0.00 0.00 0.00 5.40
945 1060 0.833287 TATGCAGCTTCTCACTCCCC 59.167 55.000 0.00 0.00 0.00 4.81
946 1061 2.926778 ATATGCAGCTTCTCACTCCC 57.073 50.000 0.00 0.00 0.00 4.30
947 1062 4.397417 ACAAAATATGCAGCTTCTCACTCC 59.603 41.667 0.00 0.00 0.00 3.85
948 1063 5.557891 ACAAAATATGCAGCTTCTCACTC 57.442 39.130 0.00 0.00 0.00 3.51
949 1064 5.391310 CGAACAAAATATGCAGCTTCTCACT 60.391 40.000 0.00 0.00 0.00 3.41
950 1065 4.790140 CGAACAAAATATGCAGCTTCTCAC 59.210 41.667 0.00 0.00 0.00 3.51
951 1066 4.455533 ACGAACAAAATATGCAGCTTCTCA 59.544 37.500 0.00 0.00 0.00 3.27
952 1067 4.790140 CACGAACAAAATATGCAGCTTCTC 59.210 41.667 0.00 0.00 0.00 2.87
953 1068 4.726416 CACGAACAAAATATGCAGCTTCT 58.274 39.130 0.00 0.00 0.00 2.85
954 1069 3.301642 GCACGAACAAAATATGCAGCTTC 59.698 43.478 0.00 0.00 36.30 3.86
955 1070 3.057315 AGCACGAACAAAATATGCAGCTT 60.057 39.130 0.00 0.00 38.79 3.74
956 1071 2.489329 AGCACGAACAAAATATGCAGCT 59.511 40.909 0.00 0.00 38.79 4.24
957 1072 2.867429 AGCACGAACAAAATATGCAGC 58.133 42.857 0.00 0.00 38.79 5.25
958 1073 4.916831 TCAAAGCACGAACAAAATATGCAG 59.083 37.500 0.00 0.00 38.79 4.41
959 1074 4.864633 TCAAAGCACGAACAAAATATGCA 58.135 34.783 0.00 0.00 38.79 3.96
960 1075 5.388371 GGTTCAAAGCACGAACAAAATATGC 60.388 40.000 12.95 0.00 43.70 3.14
961 1076 5.920273 AGGTTCAAAGCACGAACAAAATATG 59.080 36.000 12.95 0.00 43.70 1.78
962 1077 6.016276 AGAGGTTCAAAGCACGAACAAAATAT 60.016 34.615 12.95 0.00 43.70 1.28
963 1078 5.298276 AGAGGTTCAAAGCACGAACAAAATA 59.702 36.000 12.95 0.00 43.70 1.40
964 1079 4.097892 AGAGGTTCAAAGCACGAACAAAAT 59.902 37.500 12.95 0.00 43.70 1.82
965 1080 3.442273 AGAGGTTCAAAGCACGAACAAAA 59.558 39.130 12.95 0.00 43.70 2.44
966 1081 3.013921 AGAGGTTCAAAGCACGAACAAA 58.986 40.909 12.95 0.00 43.70 2.83
989 1104 7.430992 TTCATGAACTTCATCTTGACAGAAG 57.569 36.000 3.38 10.93 43.27 2.85
1084 1199 2.173519 AGGTGAATGAACATGCAAGGG 58.826 47.619 0.00 0.00 0.00 3.95
1085 1200 3.006110 ACAAGGTGAATGAACATGCAAGG 59.994 43.478 0.00 0.00 0.00 3.61
1110 1226 3.450578 AGCAAACAGAAACAATGCACAG 58.549 40.909 0.00 0.00 39.42 3.66
1164 1284 4.007659 ACCTAAAACCAATAAGCGGTGAG 58.992 43.478 0.00 0.00 36.67 3.51
1191 1317 6.017934 CGGTTCTTGTTGGGATCATGTATTAG 60.018 42.308 0.00 0.00 0.00 1.73
1283 1409 3.467483 TGGTCCCTCTATATGACTGGAGT 59.533 47.826 0.00 0.00 0.00 3.85
1286 1412 5.780282 TGTTATGGTCCCTCTATATGACTGG 59.220 44.000 0.00 0.00 0.00 4.00
1287 1413 6.918067 TGTTATGGTCCCTCTATATGACTG 57.082 41.667 0.00 0.00 0.00 3.51
1288 1414 7.931015 TTTGTTATGGTCCCTCTATATGACT 57.069 36.000 0.00 0.00 0.00 3.41
1289 1415 9.003658 CATTTTGTTATGGTCCCTCTATATGAC 57.996 37.037 0.00 0.00 0.00 3.06
1290 1416 7.665559 GCATTTTGTTATGGTCCCTCTATATGA 59.334 37.037 0.00 0.00 0.00 2.15
1291 1417 7.667219 AGCATTTTGTTATGGTCCCTCTATATG 59.333 37.037 0.00 0.00 30.88 1.78
1309 1435 5.704888 TGGTTGTCCGTTATTAGCATTTTG 58.295 37.500 0.00 0.00 36.30 2.44
1345 1472 7.549615 ACTACAAAACTAAACAAGAGACCAC 57.450 36.000 0.00 0.00 0.00 4.16
1349 1476 9.826574 ACATGTACTACAAAACTAAACAAGAGA 57.173 29.630 0.00 0.00 0.00 3.10
1350 1477 9.864034 CACATGTACTACAAAACTAAACAAGAG 57.136 33.333 0.00 0.00 0.00 2.85
1368 1495 9.436957 CTGGGGAAATATAATACTCACATGTAC 57.563 37.037 0.00 0.00 0.00 2.90
1369 1496 8.100791 GCTGGGGAAATATAATACTCACATGTA 58.899 37.037 0.00 0.00 0.00 2.29
1370 1497 6.942576 GCTGGGGAAATATAATACTCACATGT 59.057 38.462 0.00 0.00 0.00 3.21
1493 1620 6.039717 ACAAAACATGCACATATCCTGGATAC 59.960 38.462 18.31 6.80 0.00 2.24
1636 1763 7.935387 CTTTAGAAAGATCCGACAAATAACGGC 60.935 40.741 0.00 0.00 42.24 5.68
1680 1807 7.466746 TCTTTAGGGGACTTTTTCAATCATG 57.533 36.000 0.00 0.00 43.67 3.07
1732 1859 6.706295 AGTTCTCAACTCAGAATCCCTTTAG 58.294 40.000 0.00 0.00 37.02 1.85
1744 1871 4.753516 TCACTTCCAAGTTCTCAACTCA 57.246 40.909 0.00 0.00 41.91 3.41
1780 1991 8.566008 AAAGATCGTCAAAAACTTCAAATGAG 57.434 30.769 0.00 0.00 0.00 2.90
1794 2005 9.443323 TTCAAATATAACTGGAAAGATCGTCAA 57.557 29.630 2.43 0.00 0.00 3.18
1927 2149 5.600908 TGTTACACGAGAAATAACCTTGC 57.399 39.130 0.00 0.00 0.00 4.01
1988 2213 7.496920 CAGATTTGTCTATTTAGCATGAGACCA 59.503 37.037 0.00 0.00 38.01 4.02
2052 2302 6.633500 TTGGAAGGACAAGACAGTATTTTG 57.367 37.500 0.00 0.00 0.00 2.44
2101 2351 7.380602 GGCAACTGCAATCATGTTATATCTTTC 59.619 37.037 3.76 0.00 44.36 2.62
2320 2570 2.842496 TGAGGCCATGATCTTCTGAAGT 59.158 45.455 16.43 4.95 0.00 3.01
2367 2619 5.127682 ACATGGAAATGGGAGAATAAGTTGC 59.872 40.000 0.00 0.00 0.00 4.17
2381 2633 4.519540 AGGGTTTTTCGACATGGAAATG 57.480 40.909 0.00 0.00 35.95 2.32
2423 2675 7.284489 GTGAAACCACAAGGGCTAATAATATGA 59.716 37.037 0.00 0.00 42.05 2.15
2439 2691 5.353394 AGACTAACTTGAGTGAAACCACA 57.647 39.130 0.00 0.00 37.80 4.17
2466 2718 8.593945 AATTGTGTGAACTCCATACCATAAAT 57.406 30.769 0.00 0.00 36.22 1.40
2497 2749 4.533815 ACAATGTCATCTCTGCAATGGAT 58.466 39.130 0.00 0.00 0.00 3.41
2541 2793 8.609176 TCCGTTAGAAAATATAACAGTGCATTC 58.391 33.333 0.00 0.00 33.60 2.67
2597 2851 2.083774 GAAACTGCATGGACGGATGAA 58.916 47.619 0.00 0.00 0.00 2.57
2604 2858 2.508526 AGAAGTGGAAACTGCATGGAC 58.491 47.619 0.00 0.00 0.00 4.02
2679 2933 4.633126 GGAATGTCATGGATGTGGATATCG 59.367 45.833 0.00 0.00 0.00 2.92
2772 3026 3.883462 CGGGCAGCAACGACATTA 58.117 55.556 2.80 0.00 0.00 1.90
2922 3176 3.118112 CCTCTGACCATGGTAAATGAGCT 60.118 47.826 19.80 0.00 0.00 4.09
3049 3303 4.132336 TGCATATCAAGGTCATTCTCAGC 58.868 43.478 0.00 0.00 0.00 4.26
3097 3351 1.098050 CACCAATCCTTAGGCACAGC 58.902 55.000 0.00 0.00 0.00 4.40
3105 3359 1.200519 CCTCGACCCACCAATCCTTA 58.799 55.000 0.00 0.00 0.00 2.69
3201 3455 1.236616 TGATTGCCTCACCAACAGCG 61.237 55.000 0.00 0.00 0.00 5.18
3417 3671 0.721718 GCCGTCCAATTCTCTTCACG 59.278 55.000 0.00 0.00 0.00 4.35
3450 3704 5.044558 GGAATAAGAAGATCAGACACGGAC 58.955 45.833 0.00 0.00 0.00 4.79
3459 3713 7.255625 CCATCGACTGTAGGAATAAGAAGATCA 60.256 40.741 0.00 0.00 0.00 2.92
3669 3923 6.553100 TGATGAACTTCAAAACAGGGGTATTT 59.447 34.615 0.00 0.00 0.00 1.40
3781 4035 6.017687 GCAATGTACATGCAGATGATGAGTTA 60.018 38.462 9.63 0.00 43.29 2.24
3807 4086 9.155975 AGTATGCACAAGAAAGTGATTTAGTAG 57.844 33.333 0.00 0.00 42.05 2.57
3853 4132 6.592798 ACAAAAACAGCAACAATTCAGATG 57.407 33.333 0.00 0.00 0.00 2.90
3856 4135 7.590689 ACAAAAACAAAAACAGCAACAATTCAG 59.409 29.630 0.00 0.00 0.00 3.02
3892 4171 5.117592 CGATGACAGGAAAGAATGCAAAAAC 59.882 40.000 0.00 0.00 0.00 2.43
3893 4172 5.221880 CGATGACAGGAAAGAATGCAAAAA 58.778 37.500 0.00 0.00 0.00 1.94
3904 4183 1.974265 TTGGTTGCGATGACAGGAAA 58.026 45.000 0.00 0.00 0.00 3.13
3907 4186 3.470709 AGATATTGGTTGCGATGACAGG 58.529 45.455 0.00 0.00 0.00 4.00
4009 4296 3.572584 GTGCTCCTGCTCAAAATTTCAG 58.427 45.455 0.00 0.00 40.48 3.02
4159 4446 0.389948 CCCTTGTCTGCTCGTGGTAC 60.390 60.000 0.00 0.00 0.00 3.34
4192 4479 2.651361 CTGTCAGCTCGGACGGTT 59.349 61.111 5.11 0.00 40.72 4.44
4255 4542 1.068588 TCCCACTCGTCTTCAGTGTTG 59.931 52.381 1.15 0.00 39.84 3.33
4519 4806 1.993653 CTTGGTGCTCCTGGATGGA 59.006 57.895 6.34 0.00 43.86 3.41
4522 4809 2.679716 GGCTTGGTGCTCCTGGAT 59.320 61.111 6.34 0.00 42.39 3.41
4602 4889 2.358369 GAGACAGCAGCAGCAGCA 60.358 61.111 12.92 0.00 45.49 4.41
4603 4890 1.637478 GAAGAGACAGCAGCAGCAGC 61.637 60.000 3.17 0.46 45.49 5.25
4604 4891 0.037139 AGAAGAGACAGCAGCAGCAG 60.037 55.000 3.17 0.00 45.49 4.24
4605 4892 0.395686 AAGAAGAGACAGCAGCAGCA 59.604 50.000 3.17 0.00 45.49 4.41
4606 4893 1.077915 GAAGAAGAGACAGCAGCAGC 58.922 55.000 0.00 0.00 42.56 5.25
4607 4894 2.747396 AGAAGAAGAGACAGCAGCAG 57.253 50.000 0.00 0.00 0.00 4.24
4608 4895 3.482156 AAAGAAGAAGAGACAGCAGCA 57.518 42.857 0.00 0.00 0.00 4.41
4609 4896 5.174395 TCATAAAGAAGAAGAGACAGCAGC 58.826 41.667 0.00 0.00 0.00 5.25
4610 4897 7.333921 ACATTCATAAAGAAGAAGAGACAGCAG 59.666 37.037 0.00 0.00 40.15 4.24
4611 4898 7.164122 ACATTCATAAAGAAGAAGAGACAGCA 58.836 34.615 0.00 0.00 40.15 4.41
4612 4899 7.608308 ACATTCATAAAGAAGAAGAGACAGC 57.392 36.000 0.00 0.00 40.15 4.40
4613 4900 7.961827 GCAACATTCATAAAGAAGAAGAGACAG 59.038 37.037 0.00 0.00 40.15 3.51
4742 5033 2.222027 CACCAAAGGTCTCACAGGTTC 58.778 52.381 0.00 0.00 31.02 3.62
4765 5056 2.561478 ACGGCATAAAACCTCACAGT 57.439 45.000 0.00 0.00 0.00 3.55
4786 5077 7.406031 TTCTTATAACTACCAGGAGTGAGTG 57.594 40.000 0.00 0.00 0.00 3.51
4810 5102 0.773644 AGGTCCAAACACATCAGGCT 59.226 50.000 0.00 0.00 0.00 4.58
4815 5107 4.278419 AGCAACTTAAGGTCCAAACACATC 59.722 41.667 7.53 0.00 0.00 3.06
4847 5139 2.624316 TCTAAAATCACGTCGTCGCT 57.376 45.000 0.99 0.00 41.18 4.93
4886 5204 5.994054 GCAATTCTTAGCTCAGGATATCACA 59.006 40.000 4.83 0.00 0.00 3.58
4890 5208 6.430962 TCTGCAATTCTTAGCTCAGGATAT 57.569 37.500 0.00 0.00 0.00 1.63
4933 5251 9.668497 AGTACCTTACTGATCCTTTATTTTGTC 57.332 33.333 0.00 0.00 37.69 3.18
4961 5279 2.101783 TCGCTGGGTTCGGTTAGATTA 58.898 47.619 0.00 0.00 0.00 1.75
4988 5306 6.476243 TTTCTTAGAGTGATACGTTTTGCC 57.524 37.500 0.00 0.00 0.00 4.52
4995 5313 8.848182 ACCCTACTAATTTCTTAGAGTGATACG 58.152 37.037 0.00 0.00 38.19 3.06
5003 5321 9.498176 GTTTGACAACCCTACTAATTTCTTAGA 57.502 33.333 0.00 0.00 38.19 2.10
5014 5332 4.405116 TGTTACGTTTGACAACCCTACT 57.595 40.909 0.00 0.00 0.00 2.57
5015 5333 5.482686 TTTGTTACGTTTGACAACCCTAC 57.517 39.130 10.21 0.00 35.66 3.18
5114 5626 8.706322 ACAACTACAGGATAAAAAGTGGAATT 57.294 30.769 0.00 0.00 0.00 2.17
5116 5628 8.212312 TGTACAACTACAGGATAAAAAGTGGAA 58.788 33.333 0.00 0.00 0.00 3.53
5148 5660 9.799106 ATGATCTACCTTCTCTTTCAAGAAAAA 57.201 29.630 0.00 0.00 34.95 1.94
5149 5661 9.224267 CATGATCTACCTTCTCTTTCAAGAAAA 57.776 33.333 0.00 0.00 34.95 2.29
5150 5662 8.597167 TCATGATCTACCTTCTCTTTCAAGAAA 58.403 33.333 0.00 0.00 34.95 2.52
5151 5663 8.138928 TCATGATCTACCTTCTCTTTCAAGAA 57.861 34.615 0.00 0.00 34.03 2.52
5152 5664 7.724490 TCATGATCTACCTTCTCTTTCAAGA 57.276 36.000 0.00 0.00 0.00 3.02
5153 5665 8.423349 AGATCATGATCTACCTTCTCTTTCAAG 58.577 37.037 32.26 0.00 45.69 3.02
5154 5666 8.316497 AGATCATGATCTACCTTCTCTTTCAA 57.684 34.615 32.26 0.00 45.69 2.69
5155 5667 7.911130 AGATCATGATCTACCTTCTCTTTCA 57.089 36.000 32.26 0.00 45.69 2.69
5167 5679 9.039165 TGAATGCATAAGGTAGATCATGATCTA 57.961 33.333 32.49 32.49 45.69 1.98
5169 5681 8.557592 TTGAATGCATAAGGTAGATCATGATC 57.442 34.615 25.42 25.42 38.09 2.92
5170 5682 8.929260 TTTGAATGCATAAGGTAGATCATGAT 57.071 30.769 8.25 8.25 0.00 2.45
5171 5683 8.623903 GTTTTGAATGCATAAGGTAGATCATGA 58.376 33.333 0.00 0.00 0.00 3.07
5172 5684 7.588854 CGTTTTGAATGCATAAGGTAGATCATG 59.411 37.037 0.00 0.00 0.00 3.07
5173 5685 7.255242 CCGTTTTGAATGCATAAGGTAGATCAT 60.255 37.037 0.00 0.00 0.00 2.45
5174 5686 6.038161 CCGTTTTGAATGCATAAGGTAGATCA 59.962 38.462 0.00 0.00 0.00 2.92
5175 5687 6.430451 CCGTTTTGAATGCATAAGGTAGATC 58.570 40.000 0.00 0.00 0.00 2.75
5176 5688 5.299279 CCCGTTTTGAATGCATAAGGTAGAT 59.701 40.000 0.00 0.00 0.00 1.98
5177 5689 4.638421 CCCGTTTTGAATGCATAAGGTAGA 59.362 41.667 0.00 0.00 0.00 2.59
5178 5690 4.202010 CCCCGTTTTGAATGCATAAGGTAG 60.202 45.833 0.00 0.00 0.00 3.18
5179 5691 3.697045 CCCCGTTTTGAATGCATAAGGTA 59.303 43.478 0.00 0.00 0.00 3.08
5180 5692 2.495669 CCCCGTTTTGAATGCATAAGGT 59.504 45.455 0.00 0.00 0.00 3.50
5181 5693 2.738321 GCCCCGTTTTGAATGCATAAGG 60.738 50.000 0.00 0.00 0.00 2.69
5182 5694 2.094286 TGCCCCGTTTTGAATGCATAAG 60.094 45.455 0.00 0.00 0.00 1.73
5183 5695 1.895798 TGCCCCGTTTTGAATGCATAA 59.104 42.857 0.00 0.00 0.00 1.90
5184 5696 1.550327 TGCCCCGTTTTGAATGCATA 58.450 45.000 0.00 0.00 0.00 3.14
5185 5697 0.683973 TTGCCCCGTTTTGAATGCAT 59.316 45.000 0.00 0.00 0.00 3.96
5186 5698 0.465705 TTTGCCCCGTTTTGAATGCA 59.534 45.000 0.00 0.00 0.00 3.96
5187 5699 1.587547 TTTTGCCCCGTTTTGAATGC 58.412 45.000 0.00 0.00 0.00 3.56
5210 5722 4.770531 TGTAATATGACTCCTGGTATCCGG 59.229 45.833 0.00 0.00 0.00 5.14
5211 5723 5.977489 TGTAATATGACTCCTGGTATCCG 57.023 43.478 0.00 0.00 0.00 4.18
5212 5724 7.482169 TCATGTAATATGACTCCTGGTATCC 57.518 40.000 0.00 0.00 0.00 2.59
5213 5725 8.037758 CCTTCATGTAATATGACTCCTGGTATC 58.962 40.741 0.00 0.00 0.00 2.24
5214 5726 7.514127 ACCTTCATGTAATATGACTCCTGGTAT 59.486 37.037 0.00 0.00 0.00 2.73
5215 5727 6.844388 ACCTTCATGTAATATGACTCCTGGTA 59.156 38.462 0.00 0.00 0.00 3.25
5216 5728 5.667626 ACCTTCATGTAATATGACTCCTGGT 59.332 40.000 0.00 0.00 0.00 4.00
5217 5729 5.994054 CACCTTCATGTAATATGACTCCTGG 59.006 44.000 0.00 0.00 0.00 4.45
5218 5730 5.994054 CCACCTTCATGTAATATGACTCCTG 59.006 44.000 0.00 0.00 0.00 3.86
5219 5731 5.667626 ACCACCTTCATGTAATATGACTCCT 59.332 40.000 0.00 0.00 0.00 3.69
5220 5732 5.760253 CACCACCTTCATGTAATATGACTCC 59.240 44.000 0.00 0.00 0.00 3.85
5221 5733 6.258727 CACACCACCTTCATGTAATATGACTC 59.741 42.308 0.00 0.00 0.00 3.36
5222 5734 6.115446 CACACCACCTTCATGTAATATGACT 58.885 40.000 0.00 0.00 0.00 3.41
5223 5735 5.296780 CCACACCACCTTCATGTAATATGAC 59.703 44.000 0.00 0.00 0.00 3.06
5224 5736 5.436175 CCACACCACCTTCATGTAATATGA 58.564 41.667 0.00 0.00 0.00 2.15
5225 5737 4.580167 CCCACACCACCTTCATGTAATATG 59.420 45.833 0.00 0.00 0.00 1.78
5226 5738 4.792068 CCCACACCACCTTCATGTAATAT 58.208 43.478 0.00 0.00 0.00 1.28
5227 5739 3.623703 GCCCACACCACCTTCATGTAATA 60.624 47.826 0.00 0.00 0.00 0.98
5228 5740 2.883888 GCCCACACCACCTTCATGTAAT 60.884 50.000 0.00 0.00 0.00 1.89
5229 5741 1.546773 GCCCACACCACCTTCATGTAA 60.547 52.381 0.00 0.00 0.00 2.41
5230 5742 0.037590 GCCCACACCACCTTCATGTA 59.962 55.000 0.00 0.00 0.00 2.29
5231 5743 1.228552 GCCCACACCACCTTCATGT 60.229 57.895 0.00 0.00 0.00 3.21
5232 5744 1.228521 TGCCCACACCACCTTCATG 60.229 57.895 0.00 0.00 0.00 3.07
5233 5745 1.228552 GTGCCCACACCACCTTCAT 60.229 57.895 0.00 0.00 41.21 2.57
5234 5746 2.194597 GTGCCCACACCACCTTCA 59.805 61.111 0.00 0.00 41.21 3.02
5235 5747 1.454847 TTGTGCCCACACCACCTTC 60.455 57.895 0.00 0.00 46.86 3.46
5236 5748 1.756561 GTTGTGCCCACACCACCTT 60.757 57.895 0.00 0.00 46.86 3.50
5237 5749 2.123897 GTTGTGCCCACACCACCT 60.124 61.111 0.00 0.00 46.86 4.00
5238 5750 2.441164 TGTTGTGCCCACACCACC 60.441 61.111 0.00 0.00 46.86 4.61
5239 5751 2.804856 GTGTTGTGCCCACACCAC 59.195 61.111 12.24 12.24 45.03 4.16
5240 5752 1.752310 CTGTGTTGTGCCCACACCA 60.752 57.895 0.00 0.00 46.86 4.17
5241 5753 3.119193 CTGTGTTGTGCCCACACC 58.881 61.111 0.00 0.00 46.86 4.16
5243 5755 1.455402 ATGCTGTGTTGTGCCCACA 60.455 52.632 0.00 0.00 40.35 4.17
5244 5756 1.007038 CATGCTGTGTTGTGCCCAC 60.007 57.895 0.00 0.00 0.00 4.61
5245 5757 1.455402 ACATGCTGTGTTGTGCCCA 60.455 52.632 0.00 0.00 38.01 5.36
5246 5758 1.007038 CACATGCTGTGTTGTGCCC 60.007 57.895 7.80 0.00 43.08 5.36
5247 5759 4.639824 CACATGCTGTGTTGTGCC 57.360 55.556 7.80 0.00 43.08 5.01
5255 5767 3.371063 GCCTGCTGCACATGCTGT 61.371 61.111 11.72 0.00 42.66 4.40
5256 5768 4.129737 GGCCTGCTGCACATGCTG 62.130 66.667 0.00 5.89 43.89 4.41
5257 5769 4.671590 TGGCCTGCTGCACATGCT 62.672 61.111 3.32 0.00 43.89 3.79
5258 5770 4.430765 GTGGCCTGCTGCACATGC 62.431 66.667 3.32 1.59 43.89 4.06
5259 5771 3.755628 GGTGGCCTGCTGCACATG 61.756 66.667 3.32 0.00 43.89 3.21
5260 5772 4.289101 TGGTGGCCTGCTGCACAT 62.289 61.111 3.32 0.00 43.89 3.21
5265 5777 2.987547 CTTGGTGGTGGCCTGCTG 60.988 66.667 3.32 0.00 0.00 4.41
5266 5778 4.982701 GCTTGGTGGTGGCCTGCT 62.983 66.667 3.32 0.00 0.00 4.24
5270 5782 2.044946 CTAGGCTTGGTGGTGGCC 60.045 66.667 0.00 0.00 45.57 5.36
5271 5783 2.044946 CCTAGGCTTGGTGGTGGC 60.045 66.667 6.84 0.00 0.00 5.01
5272 5784 2.044946 GCCTAGGCTTGGTGGTGG 60.045 66.667 27.17 0.00 38.26 4.61
5273 5785 1.377725 CTGCCTAGGCTTGGTGGTG 60.378 63.158 33.07 10.05 42.51 4.17
5274 5786 2.606587 CCTGCCTAGGCTTGGTGGT 61.607 63.158 33.07 0.00 42.51 4.16
5275 5787 1.852157 TTCCTGCCTAGGCTTGGTGG 61.852 60.000 33.07 24.08 44.22 4.61
5276 5788 0.038166 TTTCCTGCCTAGGCTTGGTG 59.962 55.000 33.07 16.81 44.22 4.17
5277 5789 0.777446 TTTTCCTGCCTAGGCTTGGT 59.223 50.000 33.07 0.00 44.22 3.67
5278 5790 1.923356 TTTTTCCTGCCTAGGCTTGG 58.077 50.000 33.07 30.70 44.22 3.61
5294 5806 9.271921 AGCCTAATTCCCTCTATTTTCATTTTT 57.728 29.630 0.00 0.00 0.00 1.94
5295 5807 8.844865 AGCCTAATTCCCTCTATTTTCATTTT 57.155 30.769 0.00 0.00 0.00 1.82
5296 5808 8.844865 AAGCCTAATTCCCTCTATTTTCATTT 57.155 30.769 0.00 0.00 0.00 2.32
5297 5809 9.579932 CTAAGCCTAATTCCCTCTATTTTCATT 57.420 33.333 0.00 0.00 0.00 2.57
5298 5810 8.949421 TCTAAGCCTAATTCCCTCTATTTTCAT 58.051 33.333 0.00 0.00 0.00 2.57
5299 5811 8.331931 TCTAAGCCTAATTCCCTCTATTTTCA 57.668 34.615 0.00 0.00 0.00 2.69
5300 5812 8.652290 TCTCTAAGCCTAATTCCCTCTATTTTC 58.348 37.037 0.00 0.00 0.00 2.29
5301 5813 8.568617 TCTCTAAGCCTAATTCCCTCTATTTT 57.431 34.615 0.00 0.00 0.00 1.82
5302 5814 8.568617 TTCTCTAAGCCTAATTCCCTCTATTT 57.431 34.615 0.00 0.00 0.00 1.40
5303 5815 8.568617 TTTCTCTAAGCCTAATTCCCTCTATT 57.431 34.615 0.00 0.00 0.00 1.73
5304 5816 8.568617 TTTTCTCTAAGCCTAATTCCCTCTAT 57.431 34.615 0.00 0.00 0.00 1.98
5305 5817 7.989947 TTTTCTCTAAGCCTAATTCCCTCTA 57.010 36.000 0.00 0.00 0.00 2.43
5306 5818 6.893020 TTTTCTCTAAGCCTAATTCCCTCT 57.107 37.500 0.00 0.00 0.00 3.69
5307 5819 7.339482 TCTTTTTCTCTAAGCCTAATTCCCTC 58.661 38.462 0.00 0.00 0.00 4.30
5308 5820 7.272144 TCTTTTTCTCTAAGCCTAATTCCCT 57.728 36.000 0.00 0.00 0.00 4.20
5309 5821 6.038825 GCTCTTTTTCTCTAAGCCTAATTCCC 59.961 42.308 0.00 0.00 0.00 3.97
5310 5822 6.599638 TGCTCTTTTTCTCTAAGCCTAATTCC 59.400 38.462 0.00 0.00 31.96 3.01
5311 5823 7.617041 TGCTCTTTTTCTCTAAGCCTAATTC 57.383 36.000 0.00 0.00 31.96 2.17
5312 5824 6.094742 GCTGCTCTTTTTCTCTAAGCCTAATT 59.905 38.462 0.00 0.00 31.96 1.40
5313 5825 5.588246 GCTGCTCTTTTTCTCTAAGCCTAAT 59.412 40.000 0.00 0.00 31.96 1.73
5314 5826 4.938226 GCTGCTCTTTTTCTCTAAGCCTAA 59.062 41.667 0.00 0.00 31.96 2.69
5315 5827 4.020218 TGCTGCTCTTTTTCTCTAAGCCTA 60.020 41.667 0.00 0.00 31.96 3.93
5316 5828 3.244700 TGCTGCTCTTTTTCTCTAAGCCT 60.245 43.478 0.00 0.00 31.96 4.58
5317 5829 3.077359 TGCTGCTCTTTTTCTCTAAGCC 58.923 45.455 0.00 0.00 31.96 4.35
5318 5830 4.961435 ATGCTGCTCTTTTTCTCTAAGC 57.039 40.909 0.00 0.00 0.00 3.09
5319 5831 9.928236 GTAATTATGCTGCTCTTTTTCTCTAAG 57.072 33.333 0.00 0.00 0.00 2.18
5320 5832 9.448438 TGTAATTATGCTGCTCTTTTTCTCTAA 57.552 29.630 0.00 0.00 0.00 2.10
5321 5833 8.883731 GTGTAATTATGCTGCTCTTTTTCTCTA 58.116 33.333 0.00 0.00 0.00 2.43
5322 5834 7.391554 TGTGTAATTATGCTGCTCTTTTTCTCT 59.608 33.333 0.00 0.00 0.00 3.10
5323 5835 7.530010 TGTGTAATTATGCTGCTCTTTTTCTC 58.470 34.615 0.00 0.00 0.00 2.87
5324 5836 7.452880 TGTGTAATTATGCTGCTCTTTTTCT 57.547 32.000 0.00 0.00 0.00 2.52
5325 5837 8.519492 TTTGTGTAATTATGCTGCTCTTTTTC 57.481 30.769 0.00 0.00 0.00 2.29
5326 5838 8.143835 ACTTTGTGTAATTATGCTGCTCTTTTT 58.856 29.630 0.00 0.00 0.00 1.94
5327 5839 7.661040 ACTTTGTGTAATTATGCTGCTCTTTT 58.339 30.769 0.00 0.00 0.00 2.27
5328 5840 7.219484 ACTTTGTGTAATTATGCTGCTCTTT 57.781 32.000 0.00 0.00 0.00 2.52
5329 5841 6.824305 ACTTTGTGTAATTATGCTGCTCTT 57.176 33.333 0.00 0.00 0.00 2.85
5330 5842 6.037610 GCTACTTTGTGTAATTATGCTGCTCT 59.962 38.462 0.00 0.00 0.00 4.09
5331 5843 6.037610 AGCTACTTTGTGTAATTATGCTGCTC 59.962 38.462 0.00 0.00 29.99 4.26
5332 5844 5.882557 AGCTACTTTGTGTAATTATGCTGCT 59.117 36.000 0.00 0.00 29.99 4.24
5333 5845 6.124088 AGCTACTTTGTGTAATTATGCTGC 57.876 37.500 0.00 0.00 29.99 5.25
5342 5854 8.869897 CGATCAAGATTTAGCTACTTTGTGTAA 58.130 33.333 0.00 0.00 0.00 2.41
5343 5855 7.010183 GCGATCAAGATTTAGCTACTTTGTGTA 59.990 37.037 0.00 0.00 0.00 2.90
5344 5856 6.183360 GCGATCAAGATTTAGCTACTTTGTGT 60.183 38.462 0.00 0.00 0.00 3.72
5345 5857 6.188175 GCGATCAAGATTTAGCTACTTTGTG 58.812 40.000 0.00 0.00 0.00 3.33
5346 5858 5.005779 CGCGATCAAGATTTAGCTACTTTGT 59.994 40.000 0.00 0.00 0.00 2.83
5347 5859 5.005779 ACGCGATCAAGATTTAGCTACTTTG 59.994 40.000 15.93 0.00 0.00 2.77
5348 5860 5.109903 ACGCGATCAAGATTTAGCTACTTT 58.890 37.500 15.93 0.00 0.00 2.66
5349 5861 4.683832 ACGCGATCAAGATTTAGCTACTT 58.316 39.130 15.93 0.00 0.00 2.24
5350 5862 4.291783 GACGCGATCAAGATTTAGCTACT 58.708 43.478 15.93 0.00 0.00 2.57
5351 5863 3.118157 CGACGCGATCAAGATTTAGCTAC 59.882 47.826 15.93 0.00 0.00 3.58
5352 5864 3.297472 CGACGCGATCAAGATTTAGCTA 58.703 45.455 15.93 0.00 0.00 3.32
5353 5865 2.120232 CGACGCGATCAAGATTTAGCT 58.880 47.619 15.93 0.00 0.00 3.32
5354 5866 1.190323 CCGACGCGATCAAGATTTAGC 59.810 52.381 15.93 0.00 0.00 3.09
5355 5867 1.787155 CCCGACGCGATCAAGATTTAG 59.213 52.381 15.93 0.00 0.00 1.85
5356 5868 1.847818 CCCGACGCGATCAAGATTTA 58.152 50.000 15.93 0.00 0.00 1.40
5357 5869 1.429148 GCCCGACGCGATCAAGATTT 61.429 55.000 15.93 0.00 0.00 2.17
5358 5870 1.883084 GCCCGACGCGATCAAGATT 60.883 57.895 15.93 0.00 0.00 2.40
5359 5871 2.279517 GCCCGACGCGATCAAGAT 60.280 61.111 15.93 0.00 0.00 2.40
5360 5872 3.411418 GAGCCCGACGCGATCAAGA 62.411 63.158 15.93 0.00 44.76 3.02
5361 5873 2.060004 TAGAGCCCGACGCGATCAAG 62.060 60.000 15.93 1.94 44.76 3.02
5362 5874 1.452953 ATAGAGCCCGACGCGATCAA 61.453 55.000 15.93 0.00 44.76 2.57
5363 5875 1.897137 ATAGAGCCCGACGCGATCA 60.897 57.895 15.93 0.00 44.76 2.92
5364 5876 1.442857 CATAGAGCCCGACGCGATC 60.443 63.158 15.93 5.79 44.76 3.69
5365 5877 2.645567 CATAGAGCCCGACGCGAT 59.354 61.111 15.93 0.00 44.76 4.58
5366 5878 4.266070 GCATAGAGCCCGACGCGA 62.266 66.667 15.93 0.00 44.76 5.87
5375 5887 4.039004 TCTTCATCTCTGGAAGCATAGAGC 59.961 45.833 0.00 0.00 41.16 4.09
5376 5888 5.787953 TCTTCATCTCTGGAAGCATAGAG 57.212 43.478 0.00 0.00 41.16 2.43
5377 5889 6.159299 CTTCTTCATCTCTGGAAGCATAGA 57.841 41.667 0.00 0.00 41.16 1.98
5383 5895 4.468765 TCAGCTTCTTCATCTCTGGAAG 57.531 45.455 0.00 0.00 42.42 3.46
5384 5896 4.468868 TCATCAGCTTCTTCATCTCTGGAA 59.531 41.667 0.00 0.00 0.00 3.53
5385 5897 4.028825 TCATCAGCTTCTTCATCTCTGGA 58.971 43.478 0.00 0.00 0.00 3.86
5386 5898 4.403585 TCATCAGCTTCTTCATCTCTGG 57.596 45.455 0.00 0.00 0.00 3.86
5387 5899 6.285224 AGATTCATCAGCTTCTTCATCTCTG 58.715 40.000 0.00 0.00 0.00 3.35
5388 5900 6.098552 TGAGATTCATCAGCTTCTTCATCTCT 59.901 38.462 17.05 1.51 37.41 3.10
5389 5901 6.282167 TGAGATTCATCAGCTTCTTCATCTC 58.718 40.000 12.24 12.24 37.16 2.75
5390 5902 6.236558 TGAGATTCATCAGCTTCTTCATCT 57.763 37.500 0.00 0.00 0.00 2.90
5391 5903 7.499321 AATGAGATTCATCAGCTTCTTCATC 57.501 36.000 0.00 0.00 35.76 2.92
5392 5904 8.975663 TTAATGAGATTCATCAGCTTCTTCAT 57.024 30.769 0.00 0.00 35.76 2.57
5393 5905 8.797350 TTTAATGAGATTCATCAGCTTCTTCA 57.203 30.769 0.00 0.00 35.76 3.02
5394 5906 9.719279 CTTTTAATGAGATTCATCAGCTTCTTC 57.281 33.333 0.00 0.00 35.76 2.87
5395 5907 8.189460 GCTTTTAATGAGATTCATCAGCTTCTT 58.811 33.333 0.00 0.00 35.76 2.52
5396 5908 7.201803 GGCTTTTAATGAGATTCATCAGCTTCT 60.202 37.037 0.00 0.00 35.76 2.85
5397 5909 6.916932 GGCTTTTAATGAGATTCATCAGCTTC 59.083 38.462 0.00 0.00 35.76 3.86
5398 5910 6.183360 GGGCTTTTAATGAGATTCATCAGCTT 60.183 38.462 0.00 0.00 35.76 3.74
5399 5911 5.301298 GGGCTTTTAATGAGATTCATCAGCT 59.699 40.000 10.03 0.00 35.76 4.24
5400 5912 5.527033 GGGCTTTTAATGAGATTCATCAGC 58.473 41.667 0.00 0.00 35.76 4.26
5401 5913 5.528690 TCGGGCTTTTAATGAGATTCATCAG 59.471 40.000 0.00 0.00 35.76 2.90
5402 5914 5.436175 TCGGGCTTTTAATGAGATTCATCA 58.564 37.500 0.00 0.00 35.76 3.07
5403 5915 5.760253 TCTCGGGCTTTTAATGAGATTCATC 59.240 40.000 0.00 0.00 35.76 2.92
5404 5916 5.684704 TCTCGGGCTTTTAATGAGATTCAT 58.315 37.500 0.00 0.00 39.09 2.57
5405 5917 5.097742 TCTCGGGCTTTTAATGAGATTCA 57.902 39.130 0.00 0.00 31.14 2.57
5406 5918 5.561725 GCATCTCGGGCTTTTAATGAGATTC 60.562 44.000 0.54 0.00 42.19 2.52
5407 5919 4.276926 GCATCTCGGGCTTTTAATGAGATT 59.723 41.667 0.54 0.00 42.19 2.40
5408 5920 3.817647 GCATCTCGGGCTTTTAATGAGAT 59.182 43.478 0.00 0.00 44.85 2.75
5409 5921 3.206150 GCATCTCGGGCTTTTAATGAGA 58.794 45.455 0.00 0.00 39.75 3.27
5410 5922 2.945008 TGCATCTCGGGCTTTTAATGAG 59.055 45.455 0.00 0.00 0.00 2.90
5411 5923 2.945008 CTGCATCTCGGGCTTTTAATGA 59.055 45.455 0.00 0.00 0.00 2.57
5412 5924 2.684881 ACTGCATCTCGGGCTTTTAATG 59.315 45.455 0.00 0.00 0.00 1.90
5413 5925 2.945668 GACTGCATCTCGGGCTTTTAAT 59.054 45.455 0.00 0.00 0.00 1.40
5414 5926 2.356135 GACTGCATCTCGGGCTTTTAA 58.644 47.619 0.00 0.00 0.00 1.52
5415 5927 1.406887 GGACTGCATCTCGGGCTTTTA 60.407 52.381 0.00 0.00 0.00 1.52
5416 5928 0.678048 GGACTGCATCTCGGGCTTTT 60.678 55.000 0.00 0.00 0.00 2.27
5417 5929 1.078143 GGACTGCATCTCGGGCTTT 60.078 57.895 0.00 0.00 0.00 3.51
5418 5930 1.630126 ATGGACTGCATCTCGGGCTT 61.630 55.000 0.00 0.00 0.00 4.35
5419 5931 2.068821 ATGGACTGCATCTCGGGCT 61.069 57.895 0.00 0.00 0.00 5.19
5420 5932 1.890979 CATGGACTGCATCTCGGGC 60.891 63.158 0.00 0.00 0.00 6.13
5421 5933 0.531532 GACATGGACTGCATCTCGGG 60.532 60.000 0.00 0.00 0.00 5.14
5422 5934 0.463204 AGACATGGACTGCATCTCGG 59.537 55.000 0.00 0.00 0.00 4.63
5423 5935 1.408340 AGAGACATGGACTGCATCTCG 59.592 52.381 0.00 0.00 40.62 4.04
5424 5936 2.168106 ACAGAGACATGGACTGCATCTC 59.832 50.000 13.28 3.52 36.80 2.75
5425 5937 2.168106 GACAGAGACATGGACTGCATCT 59.832 50.000 13.28 0.00 35.38 2.90
5426 5938 2.548875 GACAGAGACATGGACTGCATC 58.451 52.381 13.28 4.41 35.38 3.91
5427 5939 1.209019 GGACAGAGACATGGACTGCAT 59.791 52.381 13.28 0.00 35.38 3.96
5428 5940 0.610174 GGACAGAGACATGGACTGCA 59.390 55.000 13.28 0.00 35.38 4.41
5429 5941 0.901124 AGGACAGAGACATGGACTGC 59.099 55.000 13.28 8.13 35.38 4.40
5430 5942 2.174360 TCAGGACAGAGACATGGACTG 58.826 52.381 12.25 12.25 37.62 3.51
5431 5943 2.612285 TCAGGACAGAGACATGGACT 57.388 50.000 0.00 0.00 0.00 3.85
5432 5944 2.828520 TCTTCAGGACAGAGACATGGAC 59.171 50.000 0.00 0.00 0.00 4.02
5433 5945 2.828520 GTCTTCAGGACAGAGACATGGA 59.171 50.000 0.00 0.00 43.94 3.41
5434 5946 3.244033 GTCTTCAGGACAGAGACATGG 57.756 52.381 0.00 0.00 43.94 3.66
5444 5956 2.535331 GATCGCTCTTGTCTTCAGGAC 58.465 52.381 0.00 0.00 44.70 3.85
5445 5957 1.478510 GGATCGCTCTTGTCTTCAGGA 59.521 52.381 0.00 0.00 0.00 3.86
5446 5958 1.800655 CGGATCGCTCTTGTCTTCAGG 60.801 57.143 0.00 0.00 0.00 3.86
5447 5959 1.554392 CGGATCGCTCTTGTCTTCAG 58.446 55.000 0.00 0.00 0.00 3.02
5448 5960 0.173481 CCGGATCGCTCTTGTCTTCA 59.827 55.000 0.00 0.00 0.00 3.02
5449 5961 0.528684 CCCGGATCGCTCTTGTCTTC 60.529 60.000 0.73 0.00 0.00 2.87
5450 5962 1.517832 CCCGGATCGCTCTTGTCTT 59.482 57.895 0.73 0.00 0.00 3.01
5451 5963 3.082579 GCCCGGATCGCTCTTGTCT 62.083 63.158 0.73 0.00 0.00 3.41
5452 5964 2.586357 GCCCGGATCGCTCTTGTC 60.586 66.667 0.73 0.00 0.00 3.18
5453 5965 3.077556 AGCCCGGATCGCTCTTGT 61.078 61.111 0.73 0.00 0.00 3.16
5454 5966 2.587194 CAGCCCGGATCGCTCTTG 60.587 66.667 0.73 0.00 33.17 3.02
5455 5967 3.077556 ACAGCCCGGATCGCTCTT 61.078 61.111 0.73 0.00 33.17 2.85
5456 5968 3.532155 GACAGCCCGGATCGCTCT 61.532 66.667 0.73 0.00 33.17 4.09
5457 5969 4.593864 GGACAGCCCGGATCGCTC 62.594 72.222 0.73 0.00 33.17 5.03
5459 5971 4.899239 CTGGACAGCCCGGATCGC 62.899 72.222 0.73 0.00 44.44 4.58
5460 5972 3.147595 TCTGGACAGCCCGGATCG 61.148 66.667 0.73 0.00 45.28 3.69
5464 5976 4.154347 GCTCTCTGGACAGCCCGG 62.154 72.222 0.00 0.00 42.96 5.73
5465 5977 2.947532 TTGCTCTCTGGACAGCCCG 61.948 63.158 0.00 0.00 37.93 6.13
5466 5978 1.376553 GTTGCTCTCTGGACAGCCC 60.377 63.158 0.00 0.00 34.47 5.19
5467 5979 0.673022 CAGTTGCTCTCTGGACAGCC 60.673 60.000 0.00 0.00 34.47 4.85
5468 5980 1.297456 GCAGTTGCTCTCTGGACAGC 61.297 60.000 0.00 0.00 38.21 4.40
5469 5981 0.034476 TGCAGTTGCTCTCTGGACAG 59.966 55.000 5.62 0.00 42.66 3.51
5470 5982 0.469494 TTGCAGTTGCTCTCTGGACA 59.531 50.000 5.62 0.00 42.66 4.02
5471 5983 1.736681 GATTGCAGTTGCTCTCTGGAC 59.263 52.381 5.62 0.00 42.66 4.02
5472 5984 1.673923 CGATTGCAGTTGCTCTCTGGA 60.674 52.381 5.62 0.00 42.66 3.86
5473 5985 0.725686 CGATTGCAGTTGCTCTCTGG 59.274 55.000 5.62 0.00 42.66 3.86
5474 5986 0.096628 GCGATTGCAGTTGCTCTCTG 59.903 55.000 13.90 0.00 42.66 3.35
5475 5987 1.023513 GGCGATTGCAGTTGCTCTCT 61.024 55.000 19.68 0.00 45.35 3.10
5476 5988 1.427020 GGCGATTGCAGTTGCTCTC 59.573 57.895 19.68 1.26 45.35 3.20
5477 5989 2.393768 CGGCGATTGCAGTTGCTCT 61.394 57.895 19.68 0.00 45.35 4.09
5478 5990 2.099062 CGGCGATTGCAGTTGCTC 59.901 61.111 19.68 9.91 45.35 4.26
5484 5996 1.999735 TCTCTTTTACGGCGATTGCAG 59.000 47.619 16.62 5.24 45.35 4.41
5485 5997 2.087501 TCTCTTTTACGGCGATTGCA 57.912 45.000 16.62 0.00 45.35 4.08
5486 5998 3.181510 ACATTCTCTTTTACGGCGATTGC 60.182 43.478 16.62 0.00 41.71 3.56
5487 5999 4.142902 ACACATTCTCTTTTACGGCGATTG 60.143 41.667 16.62 0.00 0.00 2.67
5488 6000 4.000988 ACACATTCTCTTTTACGGCGATT 58.999 39.130 16.62 0.00 0.00 3.34
5489 6001 3.596214 ACACATTCTCTTTTACGGCGAT 58.404 40.909 16.62 0.00 0.00 4.58
5490 6002 2.991190 GACACATTCTCTTTTACGGCGA 59.009 45.455 16.62 0.00 0.00 5.54
5491 6003 2.734606 TGACACATTCTCTTTTACGGCG 59.265 45.455 4.80 4.80 0.00 6.46
5492 6004 4.742438 TTGACACATTCTCTTTTACGGC 57.258 40.909 0.00 0.00 0.00 5.68
5493 6005 5.049405 AGCTTTGACACATTCTCTTTTACGG 60.049 40.000 0.00 0.00 0.00 4.02
5494 6006 5.990408 AGCTTTGACACATTCTCTTTTACG 58.010 37.500 0.00 0.00 0.00 3.18
5495 6007 6.142958 GCAAGCTTTGACACATTCTCTTTTAC 59.857 38.462 0.00 0.00 0.00 2.01
5496 6008 6.208644 GCAAGCTTTGACACATTCTCTTTTA 58.791 36.000 0.00 0.00 0.00 1.52
5497 6009 5.045872 GCAAGCTTTGACACATTCTCTTTT 58.954 37.500 0.00 0.00 0.00 2.27
5498 6010 4.500375 GGCAAGCTTTGACACATTCTCTTT 60.500 41.667 0.00 0.00 38.99 2.52
5499 6011 3.005155 GGCAAGCTTTGACACATTCTCTT 59.995 43.478 0.00 0.00 38.99 2.85
5500 6012 2.555757 GGCAAGCTTTGACACATTCTCT 59.444 45.455 0.00 0.00 38.99 3.10
5501 6013 2.666619 CGGCAAGCTTTGACACATTCTC 60.667 50.000 0.00 0.00 39.16 2.87
5502 6014 1.267806 CGGCAAGCTTTGACACATTCT 59.732 47.619 0.00 0.00 39.16 2.40
5503 6015 1.001378 ACGGCAAGCTTTGACACATTC 60.001 47.619 0.00 0.00 39.16 2.67
5504 6016 1.032014 ACGGCAAGCTTTGACACATT 58.968 45.000 0.00 0.00 39.16 2.71
5505 6017 1.535462 GTACGGCAAGCTTTGACACAT 59.465 47.619 0.00 0.00 39.16 3.21
5506 6018 0.941542 GTACGGCAAGCTTTGACACA 59.058 50.000 0.00 0.00 39.16 3.72
5507 6019 0.110823 CGTACGGCAAGCTTTGACAC 60.111 55.000 7.57 0.00 39.16 3.67
5508 6020 0.531090 ACGTACGGCAAGCTTTGACA 60.531 50.000 21.06 0.00 39.16 3.58
5509 6021 1.389106 CTACGTACGGCAAGCTTTGAC 59.611 52.381 21.06 0.00 34.51 3.18
5510 6022 1.705256 CTACGTACGGCAAGCTTTGA 58.295 50.000 21.06 0.00 0.00 2.69
5511 6023 0.094730 GCTACGTACGGCAAGCTTTG 59.905 55.000 23.77 4.99 32.18 2.77
5512 6024 1.017701 GGCTACGTACGGCAAGCTTT 61.018 55.000 27.31 7.53 35.30 3.51
5513 6025 1.447314 GGCTACGTACGGCAAGCTT 60.447 57.895 27.31 0.00 35.30 3.74
5514 6026 1.956629 ATGGCTACGTACGGCAAGCT 61.957 55.000 27.31 14.04 40.47 3.74
5515 6027 1.520787 ATGGCTACGTACGGCAAGC 60.521 57.895 23.29 23.29 40.47 4.01
5516 6028 1.151777 CCATGGCTACGTACGGCAAG 61.152 60.000 21.06 14.36 40.47 4.01
5517 6029 1.153529 CCATGGCTACGTACGGCAA 60.154 57.895 21.06 8.21 40.47 4.52
5518 6030 2.497293 CCATGGCTACGTACGGCA 59.503 61.111 21.06 18.45 41.36 5.69
5519 6031 2.965462 GCCATGGCTACGTACGGC 60.965 66.667 29.98 13.97 38.26 5.68
5520 6032 2.279918 GGCCATGGCTACGTACGG 60.280 66.667 34.70 3.45 41.60 4.02
5521 6033 1.299926 GAGGCCATGGCTACGTACG 60.300 63.158 34.70 15.01 38.98 3.67
5522 6034 1.069258 GGAGGCCATGGCTACGTAC 59.931 63.158 34.70 17.88 38.98 3.67
5523 6035 3.546009 GGAGGCCATGGCTACGTA 58.454 61.111 34.70 0.00 38.98 3.57
5526 6038 3.866582 AGCGGAGGCCATGGCTAC 61.867 66.667 34.70 26.31 38.98 3.58
5527 6039 3.865383 CAGCGGAGGCCATGGCTA 61.865 66.667 34.70 0.00 38.98 3.93
5530 6042 2.891941 TTTAGCAGCGGAGGCCATGG 62.892 60.000 7.63 7.63 41.24 3.66
5531 6043 1.031571 TTTTAGCAGCGGAGGCCATG 61.032 55.000 5.01 0.00 41.24 3.66
5532 6044 0.323360 TTTTTAGCAGCGGAGGCCAT 60.323 50.000 5.01 0.00 41.24 4.40
5533 6045 1.074072 TTTTTAGCAGCGGAGGCCA 59.926 52.632 5.01 0.00 41.24 5.36
5534 6046 3.996614 TTTTTAGCAGCGGAGGCC 58.003 55.556 0.00 0.00 41.24 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.