Multiple sequence alignment - TraesCS4A01G045700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G045700 chr4A 100.000 9678 0 0 1 9678 37774904 37784581 0.000000e+00 17872.0
1 TraesCS4A01G045700 chr4A 95.789 95 4 0 6758 6852 42254272 42254366 4.680000e-33 154.0
2 TraesCS4A01G045700 chr4A 94.643 56 2 1 4533 4587 37779386 37779441 1.730000e-12 86.1
3 TraesCS4A01G045700 chr4A 94.643 56 2 1 4483 4538 37779436 37779490 1.730000e-12 86.1
4 TraesCS4A01G045700 chr4D 95.726 5732 164 39 1 5697 428728582 428722897 0.000000e+00 9153.0
5 TraesCS4A01G045700 chr4D 92.385 801 37 8 8874 9672 428718732 428717954 0.000000e+00 1120.0
6 TraesCS4A01G045700 chr4D 91.203 557 26 5 6843 7397 428720234 428719699 0.000000e+00 736.0
7 TraesCS4A01G045700 chr4D 92.569 471 30 4 5689 6157 428721847 428721380 0.000000e+00 671.0
8 TraesCS4A01G045700 chr4D 92.562 363 25 2 8073 8434 428719702 428719341 4.010000e-143 520.0
9 TraesCS4A01G045700 chr4D 90.968 310 20 2 6451 6760 428720534 428720233 2.520000e-110 411.0
10 TraesCS4A01G045700 chr4D 86.943 314 25 9 8400 8700 428719343 428719033 1.200000e-88 339.0
11 TraesCS4A01G045700 chr4D 92.544 228 14 3 6157 6382 428720769 428720543 3.370000e-84 324.0
12 TraesCS4A01G045700 chr4D 80.132 151 30 0 6917 7067 76026388 76026238 7.940000e-21 113.0
13 TraesCS4A01G045700 chr4D 94.643 56 2 1 4483 4538 428724065 428724011 1.730000e-12 86.1
14 TraesCS4A01G045700 chr4B 93.443 3660 134 50 1 3623 526725429 526729019 0.000000e+00 5332.0
15 TraesCS4A01G045700 chr4B 91.667 852 24 9 3625 4435 526729136 526729981 0.000000e+00 1136.0
16 TraesCS4A01G045700 chr4B 91.194 829 39 13 8836 9663 526735659 526736454 0.000000e+00 1096.0
17 TraesCS4A01G045700 chr4B 86.086 769 63 10 6846 7611 526733653 526734380 0.000000e+00 787.0
18 TraesCS4A01G045700 chr4B 88.660 485 39 9 7929 8402 526734652 526735131 2.340000e-160 577.0
19 TraesCS4A01G045700 chr4B 81.329 632 57 19 6157 6757 526733047 526733648 3.190000e-124 457.0
20 TraesCS4A01G045700 chr4B 85.078 449 49 11 8390 8822 526735153 526735599 8.920000e-120 442.0
21 TraesCS4A01G045700 chr4B 92.958 213 8 6 4634 4844 291854254 291854461 4.390000e-78 303.0
22 TraesCS4A01G045700 chr4B 90.000 180 17 1 5975 6154 526732258 526732436 2.100000e-56 231.0
23 TraesCS4A01G045700 chr4B 94.444 144 7 1 4825 4968 526731525 526731667 4.550000e-53 220.0
24 TraesCS4A01G045700 chr4B 74.204 628 105 36 6168 6758 526733505 526732898 9.850000e-50 209.0
25 TraesCS4A01G045700 chr4B 96.460 113 3 1 4533 4645 526731427 526731538 1.660000e-42 185.0
26 TraesCS4A01G045700 chr4B 96.739 92 3 0 6754 6845 631442108 631442199 4.680000e-33 154.0
27 TraesCS4A01G045700 chr4B 92.308 104 7 1 6755 6857 159918518 159918621 7.830000e-31 147.0
28 TraesCS4A01G045700 chr4B 96.721 61 1 1 4478 4538 526731422 526731481 6.180000e-17 100.0
29 TraesCS4A01G045700 chr4B 98.148 54 1 0 4440 4493 526730739 526730792 2.880000e-15 95.3
30 TraesCS4A01G045700 chr2A 95.000 200 7 3 4645 4843 722747257 722747060 2.620000e-80 311.0
31 TraesCS4A01G045700 chr2A 73.146 391 75 16 6376 6760 125222290 125222656 7.940000e-21 113.0
32 TraesCS4A01G045700 chr5B 95.833 192 6 2 4642 4832 163273368 163273178 9.440000e-80 309.0
33 TraesCS4A01G045700 chr5B 86.755 151 17 2 8000 8149 68901362 68901214 2.160000e-36 165.0
34 TraesCS4A01G045700 chr5B 84.868 152 20 2 7999 8149 359485467 359485616 6.050000e-32 150.0
35 TraesCS4A01G045700 chr5B 90.265 113 9 2 6748 6859 344333103 344332992 7.830000e-31 147.0
36 TraesCS4A01G045700 chr5B 82.353 136 17 7 6376 6509 98291034 98290904 2.860000e-20 111.0
37 TraesCS4A01G045700 chr5B 79.121 182 22 14 6376 6551 222460652 222460481 2.860000e-20 111.0
38 TraesCS4A01G045700 chr5B 81.295 139 18 6 6376 6513 222455660 222455529 1.330000e-18 106.0
39 TraesCS4A01G045700 chr7A 92.523 214 10 5 4645 4853 554383312 554383100 1.580000e-77 302.0
40 TraesCS4A01G045700 chr7A 82.836 134 15 6 6376 6508 223673751 223673625 7.940000e-21 113.0
41 TraesCS4A01G045700 chr1B 93.269 208 9 5 4645 4852 309519067 309518865 1.580000e-77 302.0
42 TraesCS4A01G045700 chr7B 92.788 208 13 2 4645 4852 699828078 699827873 5.680000e-77 300.0
43 TraesCS4A01G045700 chr7B 83.333 144 13 11 6373 6513 74643758 74643893 1.320000e-23 122.0
44 TraesCS4A01G045700 chr2B 93.627 204 7 6 4649 4850 426779356 426779157 5.680000e-77 300.0
45 TraesCS4A01G045700 chr2B 93.846 195 9 3 4635 4827 421714174 421714367 3.420000e-74 291.0
46 TraesCS4A01G045700 chr2B 78.736 174 26 9 6376 6548 656509946 656510109 1.330000e-18 106.0
47 TraesCS4A01G045700 chr6A 89.916 238 15 9 4622 4854 94207274 94207507 2.040000e-76 298.0
48 TraesCS4A01G045700 chr3D 87.417 151 16 2 8000 8149 322435444 322435296 4.650000e-38 171.0
49 TraesCS4A01G045700 chr3B 87.417 151 16 2 8000 8149 396272031 396271883 4.650000e-38 171.0
50 TraesCS4A01G045700 chr3B 100.000 28 0 0 6699 6726 807880701 807880728 1.800000e-02 52.8
51 TraesCS4A01G045700 chr5D 80.617 227 34 6 6857 7076 234020106 234019883 6.010000e-37 167.0
52 TraesCS4A01G045700 chr5D 86.093 151 18 2 8000 8149 61713920 61714068 1.010000e-34 159.0
53 TraesCS4A01G045700 chr5D 87.050 139 13 3 7999 8134 328514058 328513922 1.680000e-32 152.0
54 TraesCS4A01G045700 chr3A 86.755 151 17 2 8000 8149 582283367 582283219 2.160000e-36 165.0
55 TraesCS4A01G045700 chr3A 92.308 104 6 2 6742 6845 36229737 36229838 7.830000e-31 147.0
56 TraesCS4A01G045700 chr5A 86.093 151 18 2 8000 8149 51688976 51689124 1.010000e-34 159.0
57 TraesCS4A01G045700 chr5A 81.429 140 16 9 6376 6513 684937756 684937887 1.330000e-18 106.0
58 TraesCS4A01G045700 chr5A 100.000 29 0 0 5705 5733 674256785 674256813 5.000000e-03 54.7
59 TraesCS4A01G045700 chr7D 95.918 98 3 1 6759 6856 169446011 169445915 3.620000e-34 158.0
60 TraesCS4A01G045700 chr7D 93.333 105 6 1 6741 6844 264138565 264138461 4.680000e-33 154.0
61 TraesCS4A01G045700 chr7D 76.562 320 51 16 6376 6689 568049532 568049231 4.680000e-33 154.0
62 TraesCS4A01G045700 chr2D 95.745 94 4 0 6756 6849 28843708 28843801 1.680000e-32 152.0
63 TraesCS4A01G045700 chr2D 92.308 52 2 2 6695 6745 86490957 86490907 1.350000e-08 73.1
64 TraesCS4A01G045700 chr1D 92.381 105 6 2 6757 6860 107173679 107173576 2.180000e-31 148.0
65 TraesCS4A01G045700 chr1D 79.661 177 21 11 6376 6548 172054212 172054377 7.940000e-21 113.0
66 TraesCS4A01G045700 chr6D 80.233 86 13 3 5705 5788 8886808 8886725 2.920000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G045700 chr4A 37774904 37784581 9677 False 17872.000000 17872 100.0000 1 9678 1 chr4A.!!$F1 9677
1 TraesCS4A01G045700 chr4D 428717954 428728582 10628 True 1659.250000 9153 91.8625 1 9672 8 chr4D.!!$R3 9671
2 TraesCS4A01G045700 chr4B 526725429 526736454 11025 False 888.191667 5332 91.1025 1 9663 12 chr4B.!!$F4 9662
3 TraesCS4A01G045700 chr4B 526732898 526733505 607 True 209.000000 209 74.2040 6168 6758 1 chr4B.!!$R1 590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
842 866 1.066286 CAGAGGAACAGGAGAAGCTGG 60.066 57.143 0.00 0.0 0.00 4.85 F
1046 1086 0.609662 TCGCGCTAGGGTTTTAAGGT 59.390 50.000 5.56 0.0 0.00 3.50 F
1983 2026 1.334869 GCTAATGCCACACTGTATGCC 59.665 52.381 1.53 0.0 0.00 4.40 F
1984 2027 2.923121 CTAATGCCACACTGTATGCCT 58.077 47.619 1.53 0.0 0.00 4.75 F
2348 2395 3.584848 ACTTCAGTAGCTTTGGGTCATCT 59.415 43.478 0.00 0.0 0.00 2.90 F
4062 4231 1.075536 TCACAGTGCTAGAGTGAGGGA 59.924 52.381 0.00 0.0 37.36 4.20 F
5204 6761 0.539901 TAGATCCCTCGGTAGGCTGC 60.540 60.000 0.00 0.0 42.14 5.25 F
5874 8498 0.035820 AACCCCGCGCAGATTTTCTA 60.036 50.000 8.75 0.0 0.00 2.10 F
7477 10765 0.040646 TACGTGACCCTCCTCCATGT 59.959 55.000 0.00 0.0 34.74 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2381 2428 2.858644 TCCAGATGGGGGTAAAGTGAT 58.141 47.619 0.00 0.0 37.22 3.06 R
2488 2535 4.514816 TCGATCACAAAGAATGCAAAGACA 59.485 37.500 0.00 0.0 0.00 3.41 R
3641 3810 2.341257 TCTTCGTCAATTCAGCTCAGC 58.659 47.619 0.00 0.0 0.00 4.26 R
4008 4177 7.283807 ACATCTGTGATCAGCATAAGCAATAAA 59.716 33.333 0.00 0.0 45.49 1.40 R
4289 4458 6.406093 TCAAAACAGTGCAAACAAATTGAG 57.594 33.333 0.00 0.0 41.85 3.02 R
5451 7011 0.191064 TGAGGACTCTCCAACCACCT 59.809 55.000 0.56 0.0 39.61 4.00 R
6668 9950 0.034380 CTGGACCTACTCCCGAGTCA 60.034 60.000 0.00 0.0 42.54 3.41 R
7566 10854 0.109272 CGCGGTATGCTATCATCCGT 60.109 55.000 0.00 0.0 41.31 4.69 R
9341 12974 0.108615 GCTACGTCATGTGCCTCACT 60.109 55.000 0.00 0.0 35.11 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 4.572909 CGATGCTGGAAGAATATGATCCA 58.427 43.478 4.77 4.77 40.84 3.41
254 256 7.894376 AACAAATATTTTTCATGTGCTCCAG 57.106 32.000 0.00 0.00 0.00 3.86
260 262 4.589216 TTTTCATGTGCTCCAGAAAAGG 57.411 40.909 9.84 0.00 35.68 3.11
316 319 9.128107 CGAAAATAGCAACAGACAATTTATGTT 57.872 29.630 0.00 0.00 44.12 2.71
452 475 8.167605 ACAGACAATATACTACTATCGCAAGT 57.832 34.615 0.00 0.00 39.48 3.16
453 476 9.281371 ACAGACAATATACTACTATCGCAAGTA 57.719 33.333 0.00 0.00 39.48 2.24
514 538 8.887717 CAGATAATTTATATAGCAAGTCCCAGC 58.112 37.037 0.00 0.00 0.00 4.85
525 549 3.193267 GCAAGTCCCAGCAATCATGTTAA 59.807 43.478 0.00 0.00 0.00 2.01
683 707 2.869801 CGCAGAGACGAAGAGAGATACT 59.130 50.000 0.00 0.00 34.06 2.12
775 799 2.203126 CCTGCATCTTCCCCGCTC 60.203 66.667 0.00 0.00 0.00 5.03
776 800 2.739996 CCTGCATCTTCCCCGCTCT 61.740 63.158 0.00 0.00 0.00 4.09
838 862 1.135141 CGAGCAGAGGAACAGGAGAAG 60.135 57.143 0.00 0.00 0.00 2.85
842 866 1.066286 CAGAGGAACAGGAGAAGCTGG 60.066 57.143 0.00 0.00 0.00 4.85
862 890 1.909986 GGCTTAAGAACAGGGAGGAGT 59.090 52.381 6.67 0.00 0.00 3.85
955 993 2.994995 TTCCGGGAGCTCTGCGAA 60.995 61.111 14.64 9.46 0.00 4.70
965 1004 1.994507 GCTCTGCGAAGTCCGAGCTA 61.995 60.000 0.00 0.00 44.04 3.32
1046 1086 0.609662 TCGCGCTAGGGTTTTAAGGT 59.390 50.000 5.56 0.00 0.00 3.50
1059 1099 4.338964 GGTTTTAAGGTTTTGAGTCGGGAA 59.661 41.667 0.00 0.00 0.00 3.97
1379 1419 1.600916 GTGCAGGGGACTTGTGGTC 60.601 63.158 0.00 0.00 40.21 4.02
1394 1434 2.025418 GGTCGTGGCGTTTGATCGT 61.025 57.895 0.00 0.00 0.00 3.73
1803 1843 2.487934 GAAGTCAGCAGCAACAAGAGA 58.512 47.619 0.00 0.00 0.00 3.10
1841 1881 4.642437 TGCTCAACAAACAAAGACACCATA 59.358 37.500 0.00 0.00 0.00 2.74
1983 2026 1.334869 GCTAATGCCACACTGTATGCC 59.665 52.381 1.53 0.00 0.00 4.40
1984 2027 2.923121 CTAATGCCACACTGTATGCCT 58.077 47.619 1.53 0.00 0.00 4.75
2146 2190 4.218417 CCCTAAAGATGAAACTGGGTTGTG 59.782 45.833 0.00 0.00 0.00 3.33
2348 2395 3.584848 ACTTCAGTAGCTTTGGGTCATCT 59.415 43.478 0.00 0.00 0.00 2.90
2488 2535 8.856103 ACTGTTTATATTGTGTAAAGCAAACCT 58.144 29.630 0.00 0.00 0.00 3.50
2703 2750 4.776837 TCCCATTTGTGCTCATGGTAAAAT 59.223 37.500 7.45 0.00 32.48 1.82
2858 2909 5.481473 AGGATATTTTGAGCAACACACCAAT 59.519 36.000 0.00 0.00 0.00 3.16
3215 3266 3.826157 TGGTAAAGCTCTTGGTCATTTGG 59.174 43.478 0.00 0.00 0.00 3.28
3489 3540 6.379417 TGGTTATGAATTGTGATATGTTGGCA 59.621 34.615 0.00 0.00 0.00 4.92
3527 3578 6.484643 TCAATCTTGAGTTGTCAGAAAAGGAG 59.515 38.462 0.00 0.00 32.98 3.69
3599 3652 9.479549 ACTCATAAAATGGAGTTATTGACCAAT 57.520 29.630 0.00 0.64 41.40 3.16
3610 3663 8.258708 GGAGTTATTGACCAATAGTTAGTGTCT 58.741 37.037 3.11 0.00 35.02 3.41
3614 3667 5.401531 TGACCAATAGTTAGTGTCTGTCC 57.598 43.478 0.00 0.00 0.00 4.02
4008 4177 6.542821 TGTTGTTATTGGTCTTCTCCATTCT 58.457 36.000 0.00 0.00 37.33 2.40
4062 4231 1.075536 TCACAGTGCTAGAGTGAGGGA 59.924 52.381 0.00 0.00 37.36 4.20
4063 4232 1.476085 CACAGTGCTAGAGTGAGGGAG 59.524 57.143 0.00 0.00 35.33 4.30
4064 4233 1.076350 ACAGTGCTAGAGTGAGGGAGT 59.924 52.381 0.00 0.00 0.00 3.85
4289 4458 0.586802 GGAAGCTGTTGACACGTTCC 59.413 55.000 0.00 4.73 0.00 3.62
4496 5458 4.764308 TGTCACCAAGCAACATAAGCAATA 59.236 37.500 0.00 0.00 0.00 1.90
4573 6130 5.036236 AGCCCCCAAACCAAAACATATTAT 58.964 37.500 0.00 0.00 0.00 1.28
4625 6182 5.836024 ACATCCCAAGGTAGTGTAAAAGA 57.164 39.130 0.00 0.00 0.00 2.52
4678 6235 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
4681 6238 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
4794 6351 1.067295 ACCTCATGGTCAGAAGGCAA 58.933 50.000 0.00 0.00 44.78 4.52
4997 6554 0.976641 TTCACCGTGGAAGAGCTCAT 59.023 50.000 17.77 2.97 0.00 2.90
4998 6555 0.976641 TCACCGTGGAAGAGCTCATT 59.023 50.000 17.77 7.31 0.00 2.57
5113 6670 4.509616 TCTTGAAGTTTTTGTCCGTGAGA 58.490 39.130 0.00 0.00 0.00 3.27
5204 6761 0.539901 TAGATCCCTCGGTAGGCTGC 60.540 60.000 0.00 0.00 42.14 5.25
5230 6787 2.573462 ACTAGCCAGAAAGCTCAATGGA 59.427 45.455 13.64 0.00 43.67 3.41
5255 6815 1.339342 CGAGTGAAATTACCCGGGGTT 60.339 52.381 26.48 13.98 37.09 4.11
5256 6816 2.089201 GAGTGAAATTACCCGGGGTTG 58.911 52.381 26.48 0.00 37.09 3.77
5324 6884 2.610873 TGATGGGGTGTACACTGTACA 58.389 47.619 24.55 16.61 0.00 2.90
5334 6894 6.151648 GGGTGTACACTGTACATAGTACAAGA 59.848 42.308 28.01 13.46 45.65 3.02
5426 6986 6.241645 GCTTATAAAGGATGTTGAGGCCTAT 58.758 40.000 4.42 0.00 0.00 2.57
5451 7011 5.221382 GGTTACATGAATCCTAGTCGGCTAA 60.221 44.000 0.00 0.00 0.00 3.09
5469 7029 1.353091 AAGGTGGTTGGAGAGTCCTC 58.647 55.000 0.00 0.00 37.46 3.71
5470 7030 0.191064 AGGTGGTTGGAGAGTCCTCA 59.809 55.000 0.00 0.00 41.20 3.86
5479 7039 1.470890 GGAGAGTCCTCACAGAGTTCG 59.529 57.143 0.00 0.00 41.20 3.95
5527 7091 3.403322 TGTTTCCTTATAGAGGGCCCAT 58.597 45.455 27.56 15.35 46.31 4.00
5528 7092 3.138283 TGTTTCCTTATAGAGGGCCCATG 59.862 47.826 27.56 4.63 46.31 3.66
5545 7109 0.321919 ATGGGCCGGATTGATGATCG 60.322 55.000 5.05 0.00 35.49 3.69
5598 7162 1.987855 CCTAGTGGGCCGACTTCCA 60.988 63.158 26.43 7.23 0.00 3.53
5624 7189 3.553095 GAAGCACCGCCCTTGACCT 62.553 63.158 0.00 0.00 0.00 3.85
5726 8350 4.200092 ACCTGGATCCGAAATAAGAAAGC 58.800 43.478 7.39 0.00 0.00 3.51
5727 8351 4.199310 CCTGGATCCGAAATAAGAAAGCA 58.801 43.478 7.39 0.00 0.00 3.91
5734 8358 3.484229 CCGAAATAAGAAAGCACGCTCTG 60.484 47.826 0.00 0.00 0.00 3.35
5759 8383 2.492484 GTTCCTTCGTGAGAGCTAGGAA 59.508 50.000 7.64 7.64 46.79 3.36
5764 8388 4.938226 CCTTCGTGAGAGCTAGGAAATTTT 59.062 41.667 0.00 0.00 43.69 1.82
5817 8441 1.948834 CAATGGAACTCACTGCACACA 59.051 47.619 0.00 0.00 0.00 3.72
5820 8444 1.166531 GGAACTCACTGCACACACCC 61.167 60.000 0.00 0.00 0.00 4.61
5861 8485 1.000717 CAACCAGTAAAGCAAACCCCG 60.001 52.381 0.00 0.00 0.00 5.73
5873 8497 0.893727 AAACCCCGCGCAGATTTTCT 60.894 50.000 8.75 0.00 0.00 2.52
5874 8498 0.035820 AACCCCGCGCAGATTTTCTA 60.036 50.000 8.75 0.00 0.00 2.10
5883 8507 3.871594 GCGCAGATTTTCTAAGCCTAAGA 59.128 43.478 0.30 0.00 0.00 2.10
5964 8589 2.559668 ACGACCCAGAAGACGTTAATCA 59.440 45.455 0.00 0.00 35.47 2.57
5965 8590 3.194968 ACGACCCAGAAGACGTTAATCAT 59.805 43.478 0.00 0.00 35.47 2.45
5967 8592 4.032900 CGACCCAGAAGACGTTAATCATTG 59.967 45.833 0.00 0.00 0.00 2.82
5968 8593 4.261801 ACCCAGAAGACGTTAATCATTGG 58.738 43.478 0.00 0.00 0.00 3.16
5973 8598 5.063944 CAGAAGACGTTAATCATTGGTGAGG 59.936 44.000 0.00 0.00 37.87 3.86
5996 8629 1.886542 CAAGGTAGTTTTGGTCTGCCC 59.113 52.381 0.00 0.00 38.21 5.36
5998 8631 1.710809 AGGTAGTTTTGGTCTGCCCAT 59.289 47.619 0.00 0.00 44.74 4.00
6014 8647 4.085733 TGCCCATGCTTAAAATGTGTACT 58.914 39.130 0.00 0.00 38.71 2.73
6044 8677 3.530535 GGTTTGGTTTCATTGTTGCAGT 58.469 40.909 0.00 0.00 0.00 4.40
6097 8730 5.221702 ACCTTTGGTTTTTGGATTGATGGAG 60.222 40.000 0.00 0.00 27.29 3.86
6112 8745 8.037166 GGATTGATGGAGAAGTTAGCAATTTTT 58.963 33.333 0.00 0.00 0.00 1.94
6209 9459 2.418609 CGCACCATGACATAGGTCTGAA 60.419 50.000 9.22 0.00 44.61 3.02
6295 9545 3.959991 GAGGAGTGCGCAGGAACCC 62.960 68.421 12.22 7.90 0.00 4.11
6362 9612 2.284995 GGCTCTCCACACCCCTCT 60.285 66.667 0.00 0.00 0.00 3.69
6409 9679 2.301296 CTCATGAGTGGAGGAGTGTTGT 59.699 50.000 14.95 0.00 0.00 3.32
6436 9706 9.369672 GACCTCTTTATAAGGGATTCTCTTCTA 57.630 37.037 1.02 0.00 38.29 2.10
6603 9885 7.570161 CCGGTCAGGAACGAATAATTAATTAC 58.430 38.462 8.54 0.00 45.97 1.89
6604 9886 7.440255 CCGGTCAGGAACGAATAATTAATTACT 59.560 37.037 8.54 0.00 45.97 2.24
6654 9936 4.220572 GCTATGAATCTAAGACGTCGGAC 58.779 47.826 10.46 0.00 0.00 4.79
6668 9950 1.603455 CGGACCATGGGTTGTTGCT 60.603 57.895 18.09 0.00 35.25 3.91
6759 10042 3.755378 GTCGGAACTCTAGTTGTCACCTA 59.245 47.826 0.00 0.00 38.56 3.08
6760 10043 3.755378 TCGGAACTCTAGTTGTCACCTAC 59.245 47.826 0.00 0.00 38.56 3.18
6761 10044 3.757493 CGGAACTCTAGTTGTCACCTACT 59.243 47.826 0.00 0.00 38.56 2.57
6762 10045 4.142643 CGGAACTCTAGTTGTCACCTACTC 60.143 50.000 0.00 0.00 38.56 2.59
6763 10046 4.158209 GGAACTCTAGTTGTCACCTACTCC 59.842 50.000 0.00 0.00 38.56 3.85
6764 10047 3.699413 ACTCTAGTTGTCACCTACTCCC 58.301 50.000 0.00 0.00 0.00 4.30
6765 10048 3.334280 ACTCTAGTTGTCACCTACTCCCT 59.666 47.826 0.00 0.00 0.00 4.20
6766 10049 3.949113 CTCTAGTTGTCACCTACTCCCTC 59.051 52.174 0.00 0.00 0.00 4.30
6767 10050 1.939980 AGTTGTCACCTACTCCCTCC 58.060 55.000 0.00 0.00 0.00 4.30
6768 10051 0.531200 GTTGTCACCTACTCCCTCCG 59.469 60.000 0.00 0.00 0.00 4.63
6769 10052 0.113776 TTGTCACCTACTCCCTCCGT 59.886 55.000 0.00 0.00 0.00 4.69
6770 10053 0.113776 TGTCACCTACTCCCTCCGTT 59.886 55.000 0.00 0.00 0.00 4.44
6771 10054 0.816373 GTCACCTACTCCCTCCGTTC 59.184 60.000 0.00 0.00 0.00 3.95
6772 10055 0.324091 TCACCTACTCCCTCCGTTCC 60.324 60.000 0.00 0.00 0.00 3.62
6773 10056 0.613853 CACCTACTCCCTCCGTTCCA 60.614 60.000 0.00 0.00 0.00 3.53
6774 10057 0.115745 ACCTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 0.00 3.53
6775 10058 1.272807 CCTACTCCCTCCGTTCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
6776 10059 1.626825 CCTACTCCCTCCGTTCCAAAA 59.373 52.381 0.00 0.00 0.00 2.44
6777 10060 2.238898 CCTACTCCCTCCGTTCCAAAAT 59.761 50.000 0.00 0.00 0.00 1.82
6778 10061 3.453353 CCTACTCCCTCCGTTCCAAAATA 59.547 47.826 0.00 0.00 0.00 1.40
6779 10062 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
6780 10063 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
6781 10064 3.055312 ACTCCCTCCGTTCCAAAATAGAC 60.055 47.826 0.00 0.00 0.00 2.59
6782 10065 2.093869 TCCCTCCGTTCCAAAATAGACG 60.094 50.000 0.00 0.00 35.44 4.18
6783 10066 2.093869 CCCTCCGTTCCAAAATAGACGA 60.094 50.000 0.00 0.00 37.69 4.20
6784 10067 2.928116 CCTCCGTTCCAAAATAGACGAC 59.072 50.000 0.00 0.00 37.69 4.34
6785 10068 3.368116 CCTCCGTTCCAAAATAGACGACT 60.368 47.826 0.00 0.00 37.69 4.18
6786 10069 3.841643 TCCGTTCCAAAATAGACGACTC 58.158 45.455 0.00 0.00 37.69 3.36
6787 10070 3.256383 TCCGTTCCAAAATAGACGACTCA 59.744 43.478 0.00 0.00 37.69 3.41
6788 10071 3.991773 CCGTTCCAAAATAGACGACTCAA 59.008 43.478 0.00 0.00 37.69 3.02
6789 10072 4.143179 CCGTTCCAAAATAGACGACTCAAC 60.143 45.833 0.00 0.00 37.69 3.18
6790 10073 4.684703 CGTTCCAAAATAGACGACTCAACT 59.315 41.667 0.00 0.00 37.69 3.16
6791 10074 5.176958 CGTTCCAAAATAGACGACTCAACTT 59.823 40.000 0.00 0.00 37.69 2.66
6792 10075 6.292703 CGTTCCAAAATAGACGACTCAACTTT 60.293 38.462 0.00 0.00 37.69 2.66
6793 10076 6.539649 TCCAAAATAGACGACTCAACTTTG 57.460 37.500 0.00 0.00 0.00 2.77
6794 10077 6.053005 TCCAAAATAGACGACTCAACTTTGT 58.947 36.000 0.00 0.00 0.00 2.83
6795 10078 7.211573 TCCAAAATAGACGACTCAACTTTGTA 58.788 34.615 0.00 0.00 0.00 2.41
6796 10079 7.170320 TCCAAAATAGACGACTCAACTTTGTAC 59.830 37.037 0.00 0.00 0.00 2.90
6797 10080 7.170998 CCAAAATAGACGACTCAACTTTGTACT 59.829 37.037 0.00 0.00 0.00 2.73
6798 10081 9.188588 CAAAATAGACGACTCAACTTTGTACTA 57.811 33.333 0.00 0.00 0.00 1.82
6799 10082 9.754382 AAAATAGACGACTCAACTTTGTACTAA 57.246 29.630 0.00 0.00 0.00 2.24
6800 10083 8.739649 AATAGACGACTCAACTTTGTACTAAC 57.260 34.615 0.00 0.00 0.00 2.34
6801 10084 6.388435 AGACGACTCAACTTTGTACTAACT 57.612 37.500 0.00 0.00 0.00 2.24
6802 10085 6.803642 AGACGACTCAACTTTGTACTAACTT 58.196 36.000 0.00 0.00 0.00 2.66
6803 10086 7.263496 AGACGACTCAACTTTGTACTAACTTT 58.737 34.615 0.00 0.00 0.00 2.66
6804 10087 8.408601 AGACGACTCAACTTTGTACTAACTTTA 58.591 33.333 0.00 0.00 0.00 1.85
6805 10088 8.931385 ACGACTCAACTTTGTACTAACTTTAA 57.069 30.769 0.00 0.00 0.00 1.52
6806 10089 9.538508 ACGACTCAACTTTGTACTAACTTTAAT 57.461 29.630 0.00 0.00 0.00 1.40
6831 10114 9.739276 ATACAAAGTTGAGTCATCTATTTTGGA 57.261 29.630 14.35 9.09 40.00 3.53
6832 10115 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
6833 10116 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
6834 10117 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
6835 10118 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
6836 10119 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
6837 10120 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
6838 10121 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
6839 10122 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
6840 10123 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
6841 10124 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
6842 10125 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
6892 10175 2.765699 ACAACCCACTGTCATTTTGCTT 59.234 40.909 0.00 0.00 0.00 3.91
6959 10242 0.685097 TGTACGAAAGAGCAGGCCTT 59.315 50.000 0.00 0.00 0.00 4.35
6970 10253 3.182996 AGGCCTTTGGAACCCCGT 61.183 61.111 0.00 0.00 34.29 5.28
7076 10359 4.260702 CGTTCTCTACTTCGACTATGTCCC 60.261 50.000 0.00 0.00 0.00 4.46
7087 10370 0.106167 CTATGTCCCCGACCTCTCCA 60.106 60.000 0.00 0.00 0.00 3.86
7114 10397 4.637574 GACATGTGTCAGAACTTCGAAG 57.362 45.455 23.43 23.43 44.18 3.79
7115 10398 2.802816 ACATGTGTCAGAACTTCGAAGC 59.197 45.455 24.86 9.80 0.00 3.86
7116 10399 1.865865 TGTGTCAGAACTTCGAAGCC 58.134 50.000 24.86 16.38 0.00 4.35
7117 10400 1.138069 TGTGTCAGAACTTCGAAGCCA 59.862 47.619 24.86 9.20 0.00 4.75
7147 10430 4.615901 CTACCGAGCATGTTGCCA 57.384 55.556 0.00 0.00 46.52 4.92
7153 10436 4.972733 AGCATGTTGCCACCGCCA 62.973 61.111 0.00 0.00 46.52 5.69
7194 10479 4.529377 TGGAGGGTATAATACGTTCATCCC 59.471 45.833 0.00 0.00 0.00 3.85
7195 10480 4.776308 GGAGGGTATAATACGTTCATCCCT 59.224 45.833 12.97 12.97 45.47 4.20
7196 10481 5.997384 AGGGTATAATACGTTCATCCCTC 57.003 43.478 0.00 0.00 39.68 4.30
7197 10482 4.776308 AGGGTATAATACGTTCATCCCTCC 59.224 45.833 0.00 0.00 39.68 4.30
7222 10507 5.437060 TCTCCTGTTTATTCCTATGTTGGC 58.563 41.667 0.00 0.00 0.00 4.52
7376 10664 0.882474 TAATTTTTCCACCACCGGCG 59.118 50.000 0.00 0.00 0.00 6.46
7411 10699 4.051922 CTCCAACATTAGACCAGATACGC 58.948 47.826 0.00 0.00 0.00 4.42
7413 10701 4.891168 TCCAACATTAGACCAGATACGCTA 59.109 41.667 0.00 0.00 0.00 4.26
7420 10708 6.947644 TTAGACCAGATACGCTATGTGTTA 57.052 37.500 0.00 0.00 0.00 2.41
7436 10724 5.808366 TGTGTTACAGATCCTCTTCAACT 57.192 39.130 0.00 0.00 0.00 3.16
7437 10725 5.541845 TGTGTTACAGATCCTCTTCAACTG 58.458 41.667 0.00 0.00 35.14 3.16
7438 10726 5.304357 TGTGTTACAGATCCTCTTCAACTGA 59.696 40.000 0.00 0.00 33.53 3.41
7439 10727 5.635700 GTGTTACAGATCCTCTTCAACTGAC 59.364 44.000 0.00 0.00 33.53 3.51
7440 10728 5.540337 TGTTACAGATCCTCTTCAACTGACT 59.460 40.000 0.00 0.00 33.53 3.41
7441 10729 6.042093 TGTTACAGATCCTCTTCAACTGACTT 59.958 38.462 0.00 0.00 33.53 3.01
7449 10737 4.260375 CCTCTTCAACTGACTTCAACAACG 60.260 45.833 0.00 0.00 0.00 4.10
7477 10765 0.040646 TACGTGACCCTCCTCCATGT 59.959 55.000 0.00 0.00 34.74 3.21
7566 10854 4.978099 AGAACTTTGAAGCAAGAGATCCA 58.022 39.130 0.00 0.00 0.00 3.41
7607 10895 3.206374 GGTTTGCCGGCTTATGGG 58.794 61.111 29.70 0.00 0.00 4.00
7608 10896 1.680989 GGTTTGCCGGCTTATGGGT 60.681 57.895 29.70 0.00 0.00 4.51
7609 10897 1.663379 GGTTTGCCGGCTTATGGGTC 61.663 60.000 29.70 8.94 0.00 4.46
7610 10898 0.963355 GTTTGCCGGCTTATGGGTCA 60.963 55.000 29.70 0.00 0.00 4.02
7611 10899 0.963355 TTTGCCGGCTTATGGGTCAC 60.963 55.000 29.70 0.00 0.00 3.67
7612 10900 1.847798 TTGCCGGCTTATGGGTCACT 61.848 55.000 29.70 0.00 0.00 3.41
7613 10901 1.077716 GCCGGCTTATGGGTCACTT 60.078 57.895 22.15 0.00 0.00 3.16
7614 10902 0.679960 GCCGGCTTATGGGTCACTTT 60.680 55.000 22.15 0.00 0.00 2.66
7615 10903 1.094785 CCGGCTTATGGGTCACTTTG 58.905 55.000 0.00 0.00 0.00 2.77
7616 10904 1.339631 CCGGCTTATGGGTCACTTTGA 60.340 52.381 0.00 0.00 0.00 2.69
7617 10905 1.737793 CGGCTTATGGGTCACTTTGAC 59.262 52.381 0.00 0.00 46.23 3.18
7628 10916 3.476552 GTCACTTTGACAAGGTCATCCA 58.523 45.455 0.00 0.00 46.22 3.41
7636 10924 3.519107 TGACAAGGTCATCCAGCTTATGA 59.481 43.478 4.69 4.69 41.09 2.15
7669 10958 6.389906 AGTTTTTGATTCCTATGGCTTTTCG 58.610 36.000 0.00 0.00 0.00 3.46
7672 10961 7.639113 TTTTGATTCCTATGGCTTTTCGTAT 57.361 32.000 0.00 0.00 0.00 3.06
7679 10968 3.715628 ATGGCTTTTCGTATTCCATGC 57.284 42.857 0.00 0.00 36.29 4.06
7690 10979 2.645838 ATTCCATGCGCTAAGGTCAT 57.354 45.000 9.73 2.39 0.00 3.06
7696 10985 1.725641 TGCGCTAAGGTCATGTCTTG 58.274 50.000 9.73 5.88 0.00 3.02
7697 10986 0.375106 GCGCTAAGGTCATGTCTTGC 59.625 55.000 0.00 11.80 0.00 4.01
7699 10988 1.009829 GCTAAGGTCATGTCTTGCGG 58.990 55.000 12.13 5.90 0.00 5.69
7700 10989 1.676014 GCTAAGGTCATGTCTTGCGGT 60.676 52.381 12.13 0.00 0.00 5.68
7701 10990 2.271800 CTAAGGTCATGTCTTGCGGTC 58.728 52.381 12.13 0.00 0.00 4.79
7713 11002 1.514678 TTGCGGTCAACATGTGCTCC 61.515 55.000 0.00 1.08 0.00 4.70
7723 11012 2.042464 ACATGTGCTCCGATACCATCT 58.958 47.619 0.00 0.00 0.00 2.90
7743 11032 3.892588 TCTTTTAACACCCCAACACATCC 59.107 43.478 0.00 0.00 0.00 3.51
7770 11059 7.713764 AGTGTTTGCATAAAAAGAATGTTCC 57.286 32.000 0.00 0.00 0.00 3.62
7791 11080 3.574826 CCAAATTAGAACCAACCGGGAAA 59.425 43.478 6.32 0.00 41.15 3.13
7793 11082 5.227152 CAAATTAGAACCAACCGGGAAAAG 58.773 41.667 6.32 0.00 41.15 2.27
7795 11084 0.106419 AGAACCAACCGGGAAAAGCA 60.106 50.000 6.32 0.00 41.15 3.91
7796 11085 0.966179 GAACCAACCGGGAAAAGCAT 59.034 50.000 6.32 0.00 41.15 3.79
7804 11118 4.296621 ACCGGGAAAAGCATAACTAACT 57.703 40.909 6.32 0.00 0.00 2.24
7812 11126 7.013369 GGGAAAAGCATAACTAACTTCCCTATG 59.987 40.741 9.29 0.00 42.95 2.23
7839 11161 7.478520 AATCTTCATATTTTCTACGGGTTCG 57.521 36.000 0.00 0.00 43.02 3.95
7860 11182 7.201548 GGTTCGTGTGTTTGAACTTAAGACTTA 60.202 37.037 10.09 0.00 43.10 2.24
7879 11201 6.379133 AGACTTATGTTGATGTTACTACGGGA 59.621 38.462 0.00 0.00 0.00 5.14
7880 11202 6.570692 ACTTATGTTGATGTTACTACGGGAG 58.429 40.000 0.00 0.00 0.00 4.30
7881 11203 6.379133 ACTTATGTTGATGTTACTACGGGAGA 59.621 38.462 0.00 0.00 0.00 3.71
7882 11204 4.713824 TGTTGATGTTACTACGGGAGAG 57.286 45.455 0.00 0.00 0.00 3.20
7883 11205 4.338012 TGTTGATGTTACTACGGGAGAGA 58.662 43.478 0.00 0.00 0.00 3.10
7884 11206 4.768448 TGTTGATGTTACTACGGGAGAGAA 59.232 41.667 0.00 0.00 0.00 2.87
7885 11207 4.978083 TGATGTTACTACGGGAGAGAAC 57.022 45.455 0.00 0.00 0.00 3.01
7886 11208 4.338012 TGATGTTACTACGGGAGAGAACA 58.662 43.478 12.59 12.59 38.23 3.18
7887 11209 4.954202 TGATGTTACTACGGGAGAGAACAT 59.046 41.667 18.70 18.70 42.65 2.71
7888 11210 5.421056 TGATGTTACTACGGGAGAGAACATT 59.579 40.000 19.27 9.07 41.34 2.71
7889 11211 5.068234 TGTTACTACGGGAGAGAACATTG 57.932 43.478 7.94 0.00 32.89 2.82
7890 11212 4.525487 TGTTACTACGGGAGAGAACATTGT 59.475 41.667 7.94 0.00 32.89 2.71
7891 11213 5.711506 TGTTACTACGGGAGAGAACATTGTA 59.288 40.000 7.94 0.00 32.89 2.41
7892 11214 4.985538 ACTACGGGAGAGAACATTGTAG 57.014 45.455 0.00 0.00 35.23 2.74
7893 11215 4.597004 ACTACGGGAGAGAACATTGTAGA 58.403 43.478 0.00 0.00 33.75 2.59
7894 11216 4.641094 ACTACGGGAGAGAACATTGTAGAG 59.359 45.833 0.00 0.00 33.75 2.43
7895 11217 2.166664 ACGGGAGAGAACATTGTAGAGC 59.833 50.000 0.00 0.00 0.00 4.09
7896 11218 2.166459 CGGGAGAGAACATTGTAGAGCA 59.834 50.000 0.00 0.00 0.00 4.26
7897 11219 3.368427 CGGGAGAGAACATTGTAGAGCAA 60.368 47.826 0.00 0.00 41.89 3.91
7899 11221 5.451937 CGGGAGAGAACATTGTAGAGCAATA 60.452 44.000 0.00 0.00 45.33 1.90
7900 11222 6.349300 GGGAGAGAACATTGTAGAGCAATAA 58.651 40.000 0.00 0.00 45.33 1.40
7901 11223 6.481644 GGGAGAGAACATTGTAGAGCAATAAG 59.518 42.308 0.00 0.00 45.33 1.73
7902 11224 6.481644 GGAGAGAACATTGTAGAGCAATAAGG 59.518 42.308 0.00 0.00 45.33 2.69
7903 11225 6.951971 AGAGAACATTGTAGAGCAATAAGGT 58.048 36.000 0.00 0.00 45.33 3.50
7904 11226 8.079211 AGAGAACATTGTAGAGCAATAAGGTA 57.921 34.615 0.00 0.00 45.33 3.08
7905 11227 7.982354 AGAGAACATTGTAGAGCAATAAGGTAC 59.018 37.037 0.00 0.00 45.33 3.34
7906 11228 7.852263 AGAACATTGTAGAGCAATAAGGTACT 58.148 34.615 0.00 0.00 45.33 2.73
7907 11229 7.982354 AGAACATTGTAGAGCAATAAGGTACTC 59.018 37.037 0.00 0.00 45.33 2.59
7908 11230 6.273825 ACATTGTAGAGCAATAAGGTACTCG 58.726 40.000 0.00 0.00 45.33 4.18
7909 11231 5.909621 TTGTAGAGCAATAAGGTACTCGT 57.090 39.130 0.00 0.00 30.78 4.18
7910 11232 5.496133 TGTAGAGCAATAAGGTACTCGTC 57.504 43.478 0.00 0.00 38.49 4.20
7911 11233 3.694535 AGAGCAATAAGGTACTCGTCG 57.305 47.619 0.00 0.00 38.49 5.12
7912 11234 3.276857 AGAGCAATAAGGTACTCGTCGA 58.723 45.455 0.00 0.00 38.49 4.20
7913 11235 3.312973 AGAGCAATAAGGTACTCGTCGAG 59.687 47.826 20.57 20.57 38.49 4.04
7914 11236 3.015327 AGCAATAAGGTACTCGTCGAGT 58.985 45.455 29.25 29.25 45.54 4.18
7915 11237 4.194640 AGCAATAAGGTACTCGTCGAGTA 58.805 43.478 27.15 27.15 41.51 2.59
7916 11238 4.820716 AGCAATAAGGTACTCGTCGAGTAT 59.179 41.667 31.68 21.01 45.21 2.12
7917 11239 4.910456 GCAATAAGGTACTCGTCGAGTATG 59.090 45.833 31.68 25.17 45.21 2.39
7918 11240 5.450171 CAATAAGGTACTCGTCGAGTATGG 58.550 45.833 31.68 14.88 45.21 2.74
7919 11241 1.307097 AGGTACTCGTCGAGTATGGC 58.693 55.000 31.68 21.06 45.21 4.40
7920 11242 1.134159 AGGTACTCGTCGAGTATGGCT 60.134 52.381 31.68 11.51 45.21 4.75
7921 11243 1.674962 GGTACTCGTCGAGTATGGCTT 59.325 52.381 31.68 10.83 45.21 4.35
7922 11244 2.098770 GGTACTCGTCGAGTATGGCTTT 59.901 50.000 31.68 10.15 45.21 3.51
7923 11245 3.428589 GGTACTCGTCGAGTATGGCTTTT 60.429 47.826 31.68 9.48 45.21 2.27
7924 11246 4.201950 GGTACTCGTCGAGTATGGCTTTTA 60.202 45.833 31.68 10.92 45.21 1.52
7925 11247 4.650754 ACTCGTCGAGTATGGCTTTTAT 57.349 40.909 25.94 0.00 41.51 1.40
7926 11248 4.608951 ACTCGTCGAGTATGGCTTTTATC 58.391 43.478 25.94 0.00 41.51 1.75
7927 11249 4.097437 ACTCGTCGAGTATGGCTTTTATCA 59.903 41.667 25.94 0.00 41.51 2.15
7950 11272 9.793259 ATCAAGTAGTTGTCATAAAAGGAGAAA 57.207 29.630 10.08 0.00 34.98 2.52
7983 11305 0.961753 AGTCAGTCTCGCATGTGTGA 59.038 50.000 6.09 6.54 0.00 3.58
7997 11319 7.441836 TCGCATGTGTGAAGGTAATTAGATAT 58.558 34.615 6.09 0.00 0.00 1.63
8069 11397 5.842907 TGGACTACATACGGATTGAATGAG 58.157 41.667 0.00 0.00 0.00 2.90
8089 11417 6.811253 TGAGTGAACAAACACACTAAAACT 57.189 33.333 0.00 0.00 45.54 2.66
8102 11430 8.361592 ACACACTAAAACTTGTCTACATACAC 57.638 34.615 0.00 0.00 0.00 2.90
8150 11479 7.569111 ACATCTTATAATAGTGAACAGAGGGGT 59.431 37.037 0.00 0.00 0.00 4.95
8219 11552 2.036256 GCCCACATCAACCAGGCT 59.964 61.111 0.00 0.00 40.57 4.58
8240 11573 7.928167 CAGGCTTTTAGTTCCATTTTTCTCTTT 59.072 33.333 0.00 0.00 0.00 2.52
8296 11630 3.454371 TCTTTACTTAGATGGGCGCTC 57.546 47.619 7.64 2.47 0.00 5.03
8311 11645 4.642437 TGGGCGCTCATGTAAAAATAATCA 59.358 37.500 5.44 0.00 0.00 2.57
8365 11699 2.539750 GCGAAAATTCTTGGAGGCGATC 60.540 50.000 0.00 0.00 0.00 3.69
8427 11794 6.806739 GGTTGAACAATTTAAGCACCTGTATC 59.193 38.462 0.00 0.00 0.00 2.24
8534 11933 3.460857 AGCATATCGAGTGAAAGGTCC 57.539 47.619 4.90 0.00 0.00 4.46
8535 11934 2.103263 AGCATATCGAGTGAAAGGTCCC 59.897 50.000 4.90 0.00 0.00 4.46
8537 11936 2.241281 TATCGAGTGAAAGGTCCCCA 57.759 50.000 0.00 0.00 0.00 4.96
8538 11937 1.358152 ATCGAGTGAAAGGTCCCCAA 58.642 50.000 0.00 0.00 0.00 4.12
8539 11938 1.358152 TCGAGTGAAAGGTCCCCAAT 58.642 50.000 0.00 0.00 0.00 3.16
8540 11939 1.702957 TCGAGTGAAAGGTCCCCAATT 59.297 47.619 0.00 0.00 0.00 2.32
8541 11940 1.812571 CGAGTGAAAGGTCCCCAATTG 59.187 52.381 0.00 0.00 0.00 2.32
8542 11941 1.546029 GAGTGAAAGGTCCCCAATTGC 59.454 52.381 0.00 0.00 0.00 3.56
8543 11942 0.243636 GTGAAAGGTCCCCAATTGCG 59.756 55.000 0.00 0.00 0.00 4.85
8544 11943 0.111446 TGAAAGGTCCCCAATTGCGA 59.889 50.000 0.00 0.00 0.00 5.10
8545 11944 1.272425 TGAAAGGTCCCCAATTGCGAT 60.272 47.619 0.00 0.00 0.00 4.58
8546 11945 1.824852 GAAAGGTCCCCAATTGCGATT 59.175 47.619 0.00 0.00 0.00 3.34
8547 11946 1.937191 AAGGTCCCCAATTGCGATTT 58.063 45.000 0.00 0.00 0.00 2.17
8551 11963 2.494073 GGTCCCCAATTGCGATTTTGTA 59.506 45.455 0.00 0.00 0.00 2.41
8552 11964 3.428862 GGTCCCCAATTGCGATTTTGTAG 60.429 47.826 0.00 0.00 0.00 2.74
8558 11970 6.361899 CCCAATTGCGATTTTGTAGTTTTTG 58.638 36.000 0.00 0.00 0.00 2.44
8700 12117 5.293324 CGTATTTGTTTGCTGGATGCTACTA 59.707 40.000 0.00 0.00 43.37 1.82
8708 12125 1.609555 CTGGATGCTACTACCTCCGTC 59.390 57.143 0.00 0.00 0.00 4.79
8710 12127 0.592148 GATGCTACTACCTCCGTCCG 59.408 60.000 0.00 0.00 0.00 4.79
8711 12128 0.822532 ATGCTACTACCTCCGTCCGG 60.823 60.000 0.00 0.00 0.00 5.14
8714 12131 1.978454 CTACTACCTCCGTCCGGAAT 58.022 55.000 5.23 3.83 44.66 3.01
8716 12133 0.822164 ACTACCTCCGTCCGGAATTG 59.178 55.000 5.23 0.00 44.66 2.32
8717 12134 0.529992 CTACCTCCGTCCGGAATTGC 60.530 60.000 5.23 0.00 44.66 3.56
8718 12135 0.974010 TACCTCCGTCCGGAATTGCT 60.974 55.000 5.23 0.00 44.66 3.91
8720 12137 0.177141 CCTCCGTCCGGAATTGCTTA 59.823 55.000 5.23 0.00 44.66 3.09
8721 12138 1.287425 CTCCGTCCGGAATTGCTTAC 58.713 55.000 5.23 0.00 44.66 2.34
8722 12139 0.458889 TCCGTCCGGAATTGCTTACG 60.459 55.000 5.23 2.84 42.05 3.18
8723 12140 1.347221 CGTCCGGAATTGCTTACGC 59.653 57.895 5.23 0.00 37.38 4.42
8724 12141 1.082117 CGTCCGGAATTGCTTACGCT 61.082 55.000 5.23 0.00 37.38 5.07
8725 12142 0.373716 GTCCGGAATTGCTTACGCTG 59.626 55.000 5.23 0.00 37.38 5.18
8727 12144 1.083489 CCGGAATTGCTTACGCTGAA 58.917 50.000 0.00 0.00 37.38 3.02
8728 12145 1.466950 CCGGAATTGCTTACGCTGAAA 59.533 47.619 0.00 0.00 37.38 2.69
8730 12147 3.311322 CCGGAATTGCTTACGCTGAAATA 59.689 43.478 0.00 0.00 37.38 1.40
8732 12149 4.270084 CGGAATTGCTTACGCTGAAATAGA 59.730 41.667 0.00 0.00 30.64 1.98
8733 12150 5.050091 CGGAATTGCTTACGCTGAAATAGAT 60.050 40.000 0.00 0.00 30.64 1.98
8734 12151 6.138761 GGAATTGCTTACGCTGAAATAGATG 58.861 40.000 0.00 0.00 36.97 2.90
8737 12154 7.969536 ATTGCTTACGCTGAAATAGATGTAT 57.030 32.000 0.00 0.00 36.97 2.29
8738 12155 7.408132 TTGCTTACGCTGAAATAGATGTATC 57.592 36.000 0.00 0.00 36.97 2.24
8739 12156 6.749139 TGCTTACGCTGAAATAGATGTATCT 58.251 36.000 0.00 0.00 37.73 1.98
8740 12157 7.882179 TGCTTACGCTGAAATAGATGTATCTA 58.118 34.615 4.22 4.22 39.18 1.98
8745 12162 8.582657 ACGCTGAAATAGATGTATCTATACCT 57.417 34.615 13.27 3.71 46.49 3.08
8746 12163 8.679100 ACGCTGAAATAGATGTATCTATACCTC 58.321 37.037 13.27 11.03 46.49 3.85
8747 12164 8.132362 CGCTGAAATAGATGTATCTATACCTCC 58.868 40.741 13.27 4.27 46.49 4.30
8761 12186 7.241042 TCTATACCTCCTCAAATAATTCCGG 57.759 40.000 0.00 0.00 0.00 5.14
8769 12194 2.767394 TCAAATAATTCCGGACGGAGGA 59.233 45.455 13.64 0.22 46.06 3.71
8774 12199 2.877975 TTCCGGACGGAGGAAGTAG 58.122 57.895 13.64 0.00 46.06 2.57
8841 12312 7.606456 AGCCTTCTGTTTCATTTTACTATCGAA 59.394 33.333 0.00 0.00 0.00 3.71
8854 12325 9.778741 ATTTTACTATCGAAGATGGCAGAAATA 57.221 29.630 0.00 0.00 45.12 1.40
8857 12328 6.821388 ACTATCGAAGATGGCAGAAATAACT 58.179 36.000 0.00 0.00 45.12 2.24
8867 12338 5.049167 TGGCAGAAATAACTTGCAAACTTG 58.951 37.500 0.00 0.00 0.00 3.16
8869 12340 6.183360 TGGCAGAAATAACTTGCAAACTTGTA 60.183 34.615 0.00 0.00 0.00 2.41
8872 12505 9.573133 GCAGAAATAACTTGCAAACTTGTATAT 57.427 29.630 0.00 0.00 0.00 0.86
8904 12537 8.355913 AGAACAAATCAAACTTCTCCTTGATTC 58.644 33.333 9.72 0.80 46.52 2.52
8908 12541 9.485206 CAAATCAAACTTCTCCTTGATTCAATT 57.515 29.630 9.72 0.00 46.52 2.32
8909 12542 9.485206 AAATCAAACTTCTCCTTGATTCAATTG 57.515 29.630 9.72 0.00 46.52 2.32
8910 12543 7.822161 TCAAACTTCTCCTTGATTCAATTGA 57.178 32.000 3.38 3.38 0.00 2.57
8911 12544 8.413309 TCAAACTTCTCCTTGATTCAATTGAT 57.587 30.769 9.40 0.00 0.00 2.57
8978 12611 3.282157 CAATCTCATGGGCGGGCG 61.282 66.667 0.00 0.00 0.00 6.13
8993 12626 0.890996 GGGCGCCTATGAAATCCCAG 60.891 60.000 28.56 0.00 34.01 4.45
9035 12668 1.903860 ACAACAATCAATGGCAGGCAT 59.096 42.857 2.93 2.93 0.00 4.40
9036 12669 3.098377 ACAACAATCAATGGCAGGCATA 58.902 40.909 10.42 0.00 0.00 3.14
9037 12670 3.707611 ACAACAATCAATGGCAGGCATAT 59.292 39.130 10.42 0.00 0.00 1.78
9038 12671 4.202182 ACAACAATCAATGGCAGGCATATC 60.202 41.667 10.42 0.00 0.00 1.63
9039 12672 3.840991 ACAATCAATGGCAGGCATATCT 58.159 40.909 10.42 0.00 0.00 1.98
9040 12673 3.572682 ACAATCAATGGCAGGCATATCTG 59.427 43.478 10.42 5.33 37.79 2.90
9041 12674 3.801307 ATCAATGGCAGGCATATCTGA 57.199 42.857 10.42 10.88 36.93 3.27
9042 12675 3.581265 TCAATGGCAGGCATATCTGAA 57.419 42.857 10.42 0.00 36.93 3.02
9043 12676 3.900971 TCAATGGCAGGCATATCTGAAA 58.099 40.909 10.42 0.00 36.93 2.69
9044 12677 4.476297 TCAATGGCAGGCATATCTGAAAT 58.524 39.130 10.42 0.00 36.93 2.17
9045 12678 4.521639 TCAATGGCAGGCATATCTGAAATC 59.478 41.667 10.42 0.00 36.93 2.17
9046 12679 3.581265 TGGCAGGCATATCTGAAATCA 57.419 42.857 0.00 0.00 36.93 2.57
9047 12680 3.216800 TGGCAGGCATATCTGAAATCAC 58.783 45.455 0.00 0.00 36.93 3.06
9048 12681 2.555757 GGCAGGCATATCTGAAATCACC 59.444 50.000 0.00 0.00 36.93 4.02
9049 12682 2.225019 GCAGGCATATCTGAAATCACCG 59.775 50.000 0.00 0.00 36.93 4.94
9050 12683 3.470709 CAGGCATATCTGAAATCACCGT 58.529 45.455 0.00 0.00 36.93 4.83
9051 12684 4.631131 CAGGCATATCTGAAATCACCGTA 58.369 43.478 0.00 0.00 36.93 4.02
9082 12715 1.080705 CCGTATGGGCGCTAGCTAC 60.081 63.158 13.93 7.06 44.37 3.58
9092 12725 0.387367 CGCTAGCTACACGCCTATGG 60.387 60.000 13.93 0.00 40.39 2.74
9106 12739 5.585445 CACGCCTATGGATACTAGTACTAGG 59.415 48.000 29.05 14.92 37.49 3.02
9341 12974 2.933906 GAGGTTGTTGAAGTTGTCGTCA 59.066 45.455 0.00 0.00 0.00 4.35
9366 12999 2.167219 CACATGACGTAGCAGCCCG 61.167 63.158 0.00 0.69 0.00 6.13
9367 13000 2.184322 CATGACGTAGCAGCCCGT 59.816 61.111 7.40 7.40 40.54 5.28
9428 13061 1.511768 GTGCGAGTACACCTCCCTC 59.488 63.158 0.00 0.00 36.82 4.30
9656 13289 0.250727 TGTTGAGGTACTTGCTGGGC 60.251 55.000 0.00 0.00 41.55 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 4.827304 TCATGTCGTGAAAGCAATTGAA 57.173 36.364 10.34 0.00 32.78 2.69
14 15 5.396484 CAAGATCATGTCGTGAAAGCAATT 58.604 37.500 0.00 0.00 40.97 2.32
60 61 4.081406 TCACACAAAATAGAAGCCAGCAT 58.919 39.130 0.00 0.00 0.00 3.79
186 188 6.765989 TGTGAAATCCTCATTCGGGTTAATAG 59.234 38.462 0.00 0.00 36.14 1.73
254 256 4.275936 TGCTGCTTACTGAAGTTCCTTTTC 59.724 41.667 0.00 0.00 34.90 2.29
260 262 2.146342 TGCTGCTGCTTACTGAAGTTC 58.854 47.619 17.00 0.00 40.48 3.01
473 496 7.452880 AAATTATCTGTTGTTCTGCAAGCTA 57.547 32.000 0.00 0.00 37.83 3.32
569 593 4.468510 TCCCATGGTACTGAGTTCGTATTT 59.531 41.667 11.73 0.00 0.00 1.40
604 628 3.366273 CGCTTGCCAAGAAATTTGCTAGA 60.366 43.478 9.04 0.00 0.00 2.43
645 669 2.613506 CGGTTCCTGTCCGTTTGCC 61.614 63.158 0.00 0.00 42.62 4.52
683 707 2.351244 CCGCTGGCTCAGAGGTACA 61.351 63.158 14.11 0.00 44.47 2.90
775 799 2.666317 GAGAGGAGGGAAGAAGAGGAG 58.334 57.143 0.00 0.00 0.00 3.69
776 800 1.064314 CGAGAGGAGGGAAGAAGAGGA 60.064 57.143 0.00 0.00 0.00 3.71
838 862 0.328258 TCCCTGTTCTTAAGCCCAGC 59.672 55.000 13.00 0.00 0.00 4.85
842 866 1.909986 ACTCCTCCCTGTTCTTAAGCC 59.090 52.381 0.00 0.00 0.00 4.35
847 871 3.544698 TGACTACTCCTCCCTGTTCTT 57.455 47.619 0.00 0.00 0.00 2.52
884 922 0.036875 CTCGGAGTGCCTTCCCTTTT 59.963 55.000 0.00 0.00 33.46 2.27
885 923 1.128188 ACTCGGAGTGCCTTCCCTTT 61.128 55.000 10.41 0.00 33.46 3.11
887 925 1.985116 GACTCGGAGTGCCTTCCCT 60.985 63.158 16.72 0.00 33.46 4.20
955 993 1.454847 CAGCCCTCTAGCTCGGACT 60.455 63.158 0.00 0.00 42.61 3.85
965 1004 3.302347 CTTCGCGGAACAGCCCTCT 62.302 63.158 6.13 0.00 0.00 3.69
1041 1081 2.774687 GCTTCCCGACTCAAAACCTTA 58.225 47.619 0.00 0.00 0.00 2.69
1046 1086 1.964373 GGCGCTTCCCGACTCAAAA 60.964 57.895 7.64 0.00 43.29 2.44
1309 1349 1.806623 GCGTCATTATCCAGCCGAAGT 60.807 52.381 0.00 0.00 0.00 3.01
1311 1351 0.874175 CGCGTCATTATCCAGCCGAA 60.874 55.000 0.00 0.00 0.00 4.30
1379 1419 1.343821 GCTACGATCAAACGCCACG 59.656 57.895 0.00 0.00 36.70 4.94
1394 1434 0.906775 CCAGGTAAACTTCCGGGCTA 59.093 55.000 0.00 0.00 34.00 3.93
1816 1856 3.366883 GGTGTCTTTGTTTGTTGAGCACA 60.367 43.478 0.00 0.00 0.00 4.57
1817 1857 3.179048 GGTGTCTTTGTTTGTTGAGCAC 58.821 45.455 0.00 0.00 0.00 4.40
1841 1881 5.253330 TCCTTCACACTTCTGAAAGTTGTT 58.747 37.500 0.00 0.00 43.28 2.83
1983 2026 4.272489 TCCTTCAAACCCTGATATGCAAG 58.728 43.478 0.00 0.00 32.78 4.01
1984 2027 4.018506 TCTCCTTCAAACCCTGATATGCAA 60.019 41.667 0.00 0.00 32.78 4.08
2146 2190 3.735746 GCCAGAGTTGCAATTAACACAAC 59.264 43.478 0.59 8.36 43.12 3.32
2221 2268 3.696051 GCCAGTTCCATAAGCATCAAGAA 59.304 43.478 0.00 0.00 0.00 2.52
2324 2371 4.164843 TGACCCAAAGCTACTGAAGTTT 57.835 40.909 0.00 0.00 0.00 2.66
2348 2395 7.773489 TTGATACCTTTGATTGATTGTTCCA 57.227 32.000 0.00 0.00 0.00 3.53
2381 2428 2.858644 TCCAGATGGGGGTAAAGTGAT 58.141 47.619 0.00 0.00 37.22 3.06
2488 2535 4.514816 TCGATCACAAAGAATGCAAAGACA 59.485 37.500 0.00 0.00 0.00 3.41
2681 2728 4.533919 TTTTACCATGAGCACAAATGGG 57.466 40.909 8.39 1.80 46.45 4.00
2703 2750 6.270156 TGCTGAATTTCAATTGCATCTACA 57.730 33.333 0.00 0.00 0.00 2.74
3215 3266 5.842907 AGAATAACTTGAAGTTTTGCCCAC 58.157 37.500 16.49 2.25 39.51 4.61
3489 3540 5.888161 ACTCAAGATTGAACTGAACCTGTTT 59.112 36.000 0.00 0.00 36.64 2.83
3527 3578 2.629656 ATTTGCCCTGTCACTGCGC 61.630 57.895 0.00 0.00 0.00 6.09
3641 3810 2.341257 TCTTCGTCAATTCAGCTCAGC 58.659 47.619 0.00 0.00 0.00 4.26
4008 4177 7.283807 ACATCTGTGATCAGCATAAGCAATAAA 59.716 33.333 0.00 0.00 45.49 1.40
4062 4231 8.788325 AAAACAACAACAGAAGACTTACTACT 57.212 30.769 0.00 0.00 0.00 2.57
4063 4232 8.662141 TGAAAACAACAACAGAAGACTTACTAC 58.338 33.333 0.00 0.00 0.00 2.73
4064 4233 8.780846 TGAAAACAACAACAGAAGACTTACTA 57.219 30.769 0.00 0.00 0.00 1.82
4213 4382 6.904626 AGTGCCAACTCCTAAGATGAAATAT 58.095 36.000 0.00 0.00 26.77 1.28
4289 4458 6.406093 TCAAAACAGTGCAAACAAATTGAG 57.594 33.333 0.00 0.00 41.85 3.02
4496 5458 1.764454 GTTGGTTTGGGGGCTTGGT 60.764 57.895 0.00 0.00 0.00 3.67
4573 6130 3.071479 GACGGCCTTGTTCAGTAATCAA 58.929 45.455 0.00 0.00 0.00 2.57
4638 6195 0.102844 CCGGGCTGCCATTTATGTTG 59.897 55.000 22.05 0.00 0.00 3.33
4678 6235 3.732849 CCCTTCCCCAGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
4681 6238 3.015753 GGACCCTTCCCCAGACCC 61.016 72.222 0.00 0.00 35.57 4.46
4686 6243 4.257810 TGGTCGGACCCTTCCCCA 62.258 66.667 23.81 0.69 38.99 4.96
4766 6323 4.617875 CCATGAGGTCACGGGTTC 57.382 61.111 0.00 0.00 0.00 3.62
4787 6344 2.030805 CAGTGGTAAAGCTGTTGCCTTC 60.031 50.000 13.72 8.90 40.80 3.46
4794 6351 1.966451 GGCGCAGTGGTAAAGCTGT 60.966 57.895 10.83 0.00 35.33 4.40
4968 6525 5.172934 TCTTCCACGGTGAATACAATACAC 58.827 41.667 10.28 0.00 0.00 2.90
4997 6554 1.069978 TGACAATGGCGTCACTGAGAA 59.930 47.619 5.06 0.00 40.94 2.87
4998 6555 0.678950 TGACAATGGCGTCACTGAGA 59.321 50.000 5.06 0.00 40.94 3.27
5113 6670 1.192146 AGGGGTGCTACGTCATGTGT 61.192 55.000 0.00 0.00 0.00 3.72
5204 6761 2.028658 TGAGCTTTCTGGCTAGTCACAG 60.029 50.000 0.00 0.00 43.20 3.66
5230 6787 3.332034 CCGGGTAATTTCACTCGTTTCT 58.668 45.455 0.00 0.00 40.89 2.52
5255 6815 2.209809 TCCAAAGGGGAGGGCTCA 59.790 61.111 0.00 0.00 42.15 4.26
5360 6920 3.584733 GGCACCTTATCATCTTCCCTT 57.415 47.619 0.00 0.00 0.00 3.95
5404 6964 6.102615 ACCATAGGCCTCAACATCCTTTATAA 59.897 38.462 9.68 0.00 0.00 0.98
5426 6986 3.181469 GCCGACTAGGATTCATGTAACCA 60.181 47.826 1.54 0.00 45.00 3.67
5451 7011 0.191064 TGAGGACTCTCCAACCACCT 59.809 55.000 0.56 0.00 39.61 4.00
5469 7029 1.000283 AGACAAGCTCCGAACTCTGTG 60.000 52.381 0.00 0.00 0.00 3.66
5470 7030 1.333177 AGACAAGCTCCGAACTCTGT 58.667 50.000 0.00 0.00 0.00 3.41
5527 7091 1.071299 CGATCATCAATCCGGCCCA 59.929 57.895 0.00 0.00 0.00 5.36
5528 7092 1.672356 CCGATCATCAATCCGGCCC 60.672 63.158 0.00 0.00 0.00 5.80
5598 7162 1.598130 GGCGGTGCTTCAAGTCACT 60.598 57.895 10.54 0.00 33.91 3.41
5624 7189 1.379916 CTGGCAAGTCCATGGACCA 59.620 57.895 36.09 26.75 45.50 4.02
5678 7243 1.403647 CCGACCTCGTCATGCTAACAA 60.404 52.381 0.00 0.00 37.74 2.83
5734 8358 1.073768 GCTCTCACGAAGGAACTCGC 61.074 60.000 0.00 0.00 38.49 5.03
5759 8383 3.673052 CGGATGATTGCCACGTGAAAATT 60.673 43.478 19.30 2.27 0.00 1.82
5764 8388 0.739462 GTCGGATGATTGCCACGTGA 60.739 55.000 19.30 0.00 0.00 4.35
5817 8441 7.080353 TGGAATCTAGGTTAGCTATTTAGGGT 58.920 38.462 0.00 0.00 0.00 4.34
5820 8444 8.429641 TGGTTGGAATCTAGGTTAGCTATTTAG 58.570 37.037 0.00 0.00 0.00 1.85
5861 8485 3.871594 TCTTAGGCTTAGAAAATCTGCGC 59.128 43.478 0.00 0.00 0.00 6.09
5883 8507 4.457496 CCTCACCATCGCGTGCCT 62.457 66.667 5.77 0.00 33.57 4.75
5926 8551 3.923461 GGTCGTTGACTTCTCTGATGAAG 59.077 47.826 12.35 12.35 46.33 3.02
5964 8589 1.705186 ACTACCTTGTGCCTCACCAAT 59.295 47.619 0.00 0.00 32.73 3.16
5965 8590 1.136828 ACTACCTTGTGCCTCACCAA 58.863 50.000 0.00 0.00 32.73 3.67
5967 8592 2.271944 AAACTACCTTGTGCCTCACC 57.728 50.000 0.00 0.00 32.73 4.02
5968 8593 2.293399 CCAAAACTACCTTGTGCCTCAC 59.707 50.000 0.00 0.00 34.56 3.51
5973 8598 2.287608 GCAGACCAAAACTACCTTGTGC 60.288 50.000 0.00 0.00 0.00 4.57
5996 8629 7.850982 GGATTACGAGTACACATTTTAAGCATG 59.149 37.037 0.00 0.00 0.00 4.06
5998 8631 7.298507 GGATTACGAGTACACATTTTAAGCA 57.701 36.000 0.00 0.00 0.00 3.91
6044 8677 4.439974 GGCAATTGTCGATTCATGGCTTTA 60.440 41.667 7.40 0.00 0.00 1.85
6174 9422 1.069204 TGGTGCGCTTAATTTTTGCCA 59.931 42.857 9.73 0.00 0.00 4.92
6209 9459 1.134521 TGTGAACGAGACAAGCCAAGT 60.135 47.619 0.00 0.00 0.00 3.16
6295 9545 3.623906 TTGGAGCTTCAGATGAGAAGG 57.376 47.619 0.00 0.00 44.03 3.46
6407 9677 6.903534 AGAGAATCCCTTATAAAGAGGTCACA 59.096 38.462 0.00 0.00 33.66 3.58
6409 9679 7.846823 AGAAGAGAATCCCTTATAAAGAGGTCA 59.153 37.037 0.00 0.00 33.66 4.02
6473 9743 3.300667 GAGGAGCAACGCAGCAACG 62.301 63.158 2.40 0.00 36.85 4.10
6474 9744 1.963338 AGAGGAGCAACGCAGCAAC 60.963 57.895 2.40 0.00 36.85 4.17
6475 9745 1.962822 CAGAGGAGCAACGCAGCAA 60.963 57.895 2.40 0.00 36.85 3.91
6476 9746 2.357881 CAGAGGAGCAACGCAGCA 60.358 61.111 2.40 0.00 36.85 4.41
6477 9747 3.797546 GCAGAGGAGCAACGCAGC 61.798 66.667 0.00 0.00 0.00 5.25
6478 9748 3.123620 GGCAGAGGAGCAACGCAG 61.124 66.667 0.00 0.00 35.83 5.18
6552 9834 4.439305 AATTAAGCGCACACATGACATT 57.561 36.364 11.47 0.00 0.00 2.71
6654 9936 0.883833 GAGTCAGCAACAACCCATGG 59.116 55.000 4.14 4.14 0.00 3.66
6668 9950 0.034380 CTGGACCTACTCCCGAGTCA 60.034 60.000 0.00 0.00 42.54 3.41
6759 10042 3.055312 GTCTATTTTGGAACGGAGGGAGT 60.055 47.826 0.00 0.00 0.00 3.85
6760 10043 3.532542 GTCTATTTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
6761 10044 2.093869 CGTCTATTTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
6762 10045 2.093869 TCGTCTATTTTGGAACGGAGGG 60.094 50.000 0.00 0.00 0.00 4.30
6763 10046 2.928116 GTCGTCTATTTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
6764 10047 3.846360 AGTCGTCTATTTTGGAACGGAG 58.154 45.455 0.00 0.00 0.00 4.63
6765 10048 3.256383 TGAGTCGTCTATTTTGGAACGGA 59.744 43.478 0.00 0.00 0.00 4.69
6766 10049 3.581755 TGAGTCGTCTATTTTGGAACGG 58.418 45.455 0.00 0.00 0.00 4.44
6767 10050 4.684703 AGTTGAGTCGTCTATTTTGGAACG 59.315 41.667 0.00 0.00 0.00 3.95
6768 10051 6.541111 AAGTTGAGTCGTCTATTTTGGAAC 57.459 37.500 0.00 0.00 0.00 3.62
6769 10052 6.540914 ACAAAGTTGAGTCGTCTATTTTGGAA 59.459 34.615 0.00 0.00 38.53 3.53
6770 10053 6.053005 ACAAAGTTGAGTCGTCTATTTTGGA 58.947 36.000 0.00 0.00 38.53 3.53
6771 10054 6.300354 ACAAAGTTGAGTCGTCTATTTTGG 57.700 37.500 0.00 0.00 38.53 3.28
6772 10055 8.073355 AGTACAAAGTTGAGTCGTCTATTTTG 57.927 34.615 0.00 4.77 39.42 2.44
6773 10056 9.754382 TTAGTACAAAGTTGAGTCGTCTATTTT 57.246 29.630 0.00 0.00 0.00 1.82
6774 10057 9.189723 GTTAGTACAAAGTTGAGTCGTCTATTT 57.810 33.333 0.00 0.00 0.00 1.40
6775 10058 8.574737 AGTTAGTACAAAGTTGAGTCGTCTATT 58.425 33.333 0.00 0.00 0.00 1.73
6776 10059 8.108551 AGTTAGTACAAAGTTGAGTCGTCTAT 57.891 34.615 0.00 0.00 0.00 1.98
6777 10060 7.502120 AGTTAGTACAAAGTTGAGTCGTCTA 57.498 36.000 0.00 0.00 0.00 2.59
6778 10061 6.388435 AGTTAGTACAAAGTTGAGTCGTCT 57.612 37.500 0.00 0.00 0.00 4.18
6779 10062 7.460751 AAAGTTAGTACAAAGTTGAGTCGTC 57.539 36.000 0.00 0.00 0.00 4.20
6780 10063 8.931385 TTAAAGTTAGTACAAAGTTGAGTCGT 57.069 30.769 0.00 0.00 0.00 4.34
6805 10088 9.739276 TCCAAAATAGATGACTCAACTTTGTAT 57.261 29.630 0.00 0.00 0.00 2.29
6806 10089 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
6807 10090 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
6808 10091 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
6809 10092 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
6810 10093 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
6811 10094 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
6812 10095 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
6813 10096 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
6814 10097 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
6815 10098 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
6816 10099 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
6817 10100 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
6818 10101 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
6819 10102 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
6820 10103 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
6821 10104 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
6822 10105 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
6823 10106 4.355549 TCTACTCCCTCCGTTCCAAAATA 58.644 43.478 0.00 0.00 0.00 1.40
6824 10107 3.178865 TCTACTCCCTCCGTTCCAAAAT 58.821 45.455 0.00 0.00 0.00 1.82
6825 10108 2.612000 TCTACTCCCTCCGTTCCAAAA 58.388 47.619 0.00 0.00 0.00 2.44
6826 10109 2.314071 TCTACTCCCTCCGTTCCAAA 57.686 50.000 0.00 0.00 0.00 3.28
6827 10110 2.385803 GATCTACTCCCTCCGTTCCAA 58.614 52.381 0.00 0.00 0.00 3.53
6828 10111 1.749635 CGATCTACTCCCTCCGTTCCA 60.750 57.143 0.00 0.00 0.00 3.53
6829 10112 0.953003 CGATCTACTCCCTCCGTTCC 59.047 60.000 0.00 0.00 0.00 3.62
6830 10113 0.311477 GCGATCTACTCCCTCCGTTC 59.689 60.000 0.00 0.00 0.00 3.95
6831 10114 0.395311 TGCGATCTACTCCCTCCGTT 60.395 55.000 0.00 0.00 0.00 4.44
6832 10115 0.178987 ATGCGATCTACTCCCTCCGT 60.179 55.000 0.00 0.00 0.00 4.69
6833 10116 0.523966 GATGCGATCTACTCCCTCCG 59.476 60.000 0.00 0.00 0.00 4.63
6834 10117 1.543802 CAGATGCGATCTACTCCCTCC 59.456 57.143 0.00 0.00 37.58 4.30
6835 10118 1.067915 GCAGATGCGATCTACTCCCTC 60.068 57.143 0.00 0.00 37.58 4.30
6836 10119 0.965439 GCAGATGCGATCTACTCCCT 59.035 55.000 0.00 0.00 37.58 4.20
6837 10120 1.067915 GAGCAGATGCGATCTACTCCC 60.068 57.143 12.08 0.00 41.78 4.30
6838 10121 1.885887 AGAGCAGATGCGATCTACTCC 59.114 52.381 16.45 5.79 46.45 3.85
6839 10122 3.119990 GGTAGAGCAGATGCGATCTACTC 60.120 52.174 22.89 13.27 45.90 2.59
6840 10123 2.817258 GGTAGAGCAGATGCGATCTACT 59.183 50.000 22.89 6.64 43.04 2.57
6947 10230 0.540597 GGTTCCAAAGGCCTGCTCTT 60.541 55.000 5.69 0.00 0.00 2.85
6959 10242 1.529713 GCAAAGGACGGGGTTCCAA 60.530 57.895 0.00 0.00 38.25 3.53
6970 10253 1.377202 GGTGCAGGATCGCAAAGGA 60.377 57.895 0.00 0.00 45.14 3.36
7076 10359 1.070134 TGTCAAAGTTGGAGAGGTCGG 59.930 52.381 0.00 0.00 0.00 4.79
7110 10393 1.466558 GCCTTCTTCTTTCTGGCTTCG 59.533 52.381 0.00 0.00 40.36 3.79
7114 10397 2.360844 GGTAGCCTTCTTCTTTCTGGC 58.639 52.381 0.00 0.00 43.52 4.85
7115 10398 2.233922 TCGGTAGCCTTCTTCTTTCTGG 59.766 50.000 0.00 0.00 0.00 3.86
7116 10399 3.516615 CTCGGTAGCCTTCTTCTTTCTG 58.483 50.000 0.00 0.00 0.00 3.02
7117 10400 2.093921 GCTCGGTAGCCTTCTTCTTTCT 60.094 50.000 0.00 0.00 43.40 2.52
7147 10430 3.991051 CAGGTCAGTCGTGGCGGT 61.991 66.667 0.00 0.00 0.00 5.68
7153 10436 2.140792 AGTTGGCCAGGTCAGTCGT 61.141 57.895 5.11 0.00 0.00 4.34
7194 10479 5.604650 ACATAGGAATAAACAGGAGAGGGAG 59.395 44.000 0.00 0.00 0.00 4.30
7195 10480 5.538877 ACATAGGAATAAACAGGAGAGGGA 58.461 41.667 0.00 0.00 0.00 4.20
7196 10481 5.896073 ACATAGGAATAAACAGGAGAGGG 57.104 43.478 0.00 0.00 0.00 4.30
7197 10482 6.058183 CCAACATAGGAATAAACAGGAGAGG 58.942 44.000 0.00 0.00 0.00 3.69
7376 10664 1.270625 TGTTGGAGACATTGGGACGAC 60.271 52.381 0.00 0.00 42.32 4.34
7436 10724 1.135053 TCGACCACGTTGTTGAAGTCA 60.135 47.619 7.23 0.00 40.69 3.41
7437 10725 1.563111 TCGACCACGTTGTTGAAGTC 58.437 50.000 7.23 0.00 40.69 3.01
7438 10726 2.012937 TTCGACCACGTTGTTGAAGT 57.987 45.000 16.37 0.00 40.69 3.01
7439 10727 3.421312 CGTATTCGACCACGTTGTTGAAG 60.421 47.826 22.56 9.78 40.90 3.02
7440 10728 2.472115 CGTATTCGACCACGTTGTTGAA 59.528 45.455 21.05 21.05 41.60 2.69
7441 10729 2.052891 CGTATTCGACCACGTTGTTGA 58.947 47.619 5.63 5.63 40.69 3.18
7462 10750 1.547675 GCAAAACATGGAGGAGGGTCA 60.548 52.381 0.00 0.00 0.00 4.02
7467 10755 3.592059 CCAAATGCAAAACATGGAGGAG 58.408 45.455 0.00 0.00 39.60 3.69
7477 10765 1.976404 TGGAGATGGCCAAATGCAAAA 59.024 42.857 10.96 0.00 43.89 2.44
7566 10854 0.109272 CGCGGTATGCTATCATCCGT 60.109 55.000 0.00 0.00 41.31 4.69
7594 10882 1.847798 AAGTGACCCATAAGCCGGCA 61.848 55.000 31.54 9.64 0.00 5.69
7595 10883 0.679960 AAAGTGACCCATAAGCCGGC 60.680 55.000 21.89 21.89 0.00 6.13
7596 10884 1.094785 CAAAGTGACCCATAAGCCGG 58.905 55.000 0.00 0.00 0.00 6.13
7597 10885 1.737793 GTCAAAGTGACCCATAAGCCG 59.262 52.381 0.00 0.00 41.37 5.52
7598 10886 2.790433 TGTCAAAGTGACCCATAAGCC 58.210 47.619 5.96 0.00 46.40 4.35
7599 10887 3.191371 CCTTGTCAAAGTGACCCATAAGC 59.809 47.826 5.96 0.00 46.40 3.09
7600 10888 4.398319 ACCTTGTCAAAGTGACCCATAAG 58.602 43.478 5.96 3.28 46.40 1.73
7601 10889 4.141367 TGACCTTGTCAAAGTGACCCATAA 60.141 41.667 5.96 0.00 46.40 1.90
7602 10890 3.392947 TGACCTTGTCAAAGTGACCCATA 59.607 43.478 5.96 0.00 46.40 2.74
7603 10891 2.174639 TGACCTTGTCAAAGTGACCCAT 59.825 45.455 5.96 0.00 46.40 4.00
7604 10892 1.562008 TGACCTTGTCAAAGTGACCCA 59.438 47.619 5.96 0.00 46.40 4.51
7605 10893 2.341846 TGACCTTGTCAAAGTGACCC 57.658 50.000 5.96 0.00 46.40 4.46
7606 10894 2.814336 GGATGACCTTGTCAAAGTGACC 59.186 50.000 5.96 0.00 46.40 4.02
7607 10895 3.476552 TGGATGACCTTGTCAAAGTGAC 58.523 45.455 0.46 1.34 45.96 3.67
7608 10896 3.743521 CTGGATGACCTTGTCAAAGTGA 58.256 45.455 0.46 0.00 45.96 3.41
7609 10897 2.227388 GCTGGATGACCTTGTCAAAGTG 59.773 50.000 0.46 0.00 45.96 3.16
7610 10898 2.107204 AGCTGGATGACCTTGTCAAAGT 59.893 45.455 0.46 0.00 45.96 2.66
7611 10899 2.787994 AGCTGGATGACCTTGTCAAAG 58.212 47.619 0.46 1.65 45.96 2.77
7612 10900 2.957402 AGCTGGATGACCTTGTCAAA 57.043 45.000 0.46 0.00 45.96 2.69
7613 10901 2.957402 AAGCTGGATGACCTTGTCAA 57.043 45.000 0.46 0.00 45.96 3.18
7614 10902 3.519107 TCATAAGCTGGATGACCTTGTCA 59.481 43.478 7.35 0.00 46.90 3.58
7615 10903 4.142609 TCATAAGCTGGATGACCTTGTC 57.857 45.455 7.35 0.00 37.04 3.18
7616 10904 4.574674 TTCATAAGCTGGATGACCTTGT 57.425 40.909 10.38 0.00 33.06 3.16
7617 10905 5.128205 TGATTCATAAGCTGGATGACCTTG 58.872 41.667 10.38 0.00 33.06 3.61
7618 10906 5.378230 TGATTCATAAGCTGGATGACCTT 57.622 39.130 10.38 1.02 33.06 3.50
7619 10907 5.378230 TTGATTCATAAGCTGGATGACCT 57.622 39.130 10.38 2.94 33.06 3.85
7620 10908 6.455360 TTTTGATTCATAAGCTGGATGACC 57.545 37.500 10.38 7.10 33.06 4.02
7621 10909 8.844244 ACTATTTTGATTCATAAGCTGGATGAC 58.156 33.333 10.38 2.85 33.06 3.06
7622 10910 8.985315 ACTATTTTGATTCATAAGCTGGATGA 57.015 30.769 7.35 7.35 0.00 2.92
7652 10940 5.763204 TGGAATACGAAAAGCCATAGGAATC 59.237 40.000 0.00 0.00 0.00 2.52
7667 10956 1.411246 ACCTTAGCGCATGGAATACGA 59.589 47.619 11.47 0.00 34.24 3.43
7669 10958 2.833794 TGACCTTAGCGCATGGAATAC 58.166 47.619 11.47 4.37 0.00 1.89
7672 10961 1.065491 ACATGACCTTAGCGCATGGAA 60.065 47.619 11.47 3.26 42.70 3.53
7679 10968 0.647410 CGCAAGACATGACCTTAGCG 59.353 55.000 20.78 20.78 43.02 4.26
7690 10979 0.943673 CACATGTTGACCGCAAGACA 59.056 50.000 0.00 0.00 43.02 3.41
7696 10985 2.870372 GGAGCACATGTTGACCGC 59.130 61.111 0.00 0.00 0.00 5.68
7697 10986 0.740868 ATCGGAGCACATGTTGACCG 60.741 55.000 20.98 20.98 43.47 4.79
7699 10988 1.933853 GGTATCGGAGCACATGTTGAC 59.066 52.381 0.00 0.00 0.00 3.18
7700 10989 1.552792 TGGTATCGGAGCACATGTTGA 59.447 47.619 0.00 0.00 0.00 3.18
7701 10990 2.022764 TGGTATCGGAGCACATGTTG 57.977 50.000 0.00 0.00 0.00 3.33
7713 11002 4.519213 TGGGGTGTTAAAAGATGGTATCG 58.481 43.478 0.00 0.00 0.00 2.92
7723 11012 3.643237 TGGATGTGTTGGGGTGTTAAAA 58.357 40.909 0.00 0.00 0.00 1.52
7770 11059 4.857509 TTTCCCGGTTGGTTCTAATTTG 57.142 40.909 0.00 0.00 34.77 2.32
7791 11080 9.700831 ATTTTCATAGGGAAGTTAGTTATGCTT 57.299 29.630 0.00 0.00 36.72 3.91
7793 11082 9.343539 AGATTTTCATAGGGAAGTTAGTTATGC 57.656 33.333 0.00 0.00 36.72 3.14
7833 11147 4.333372 TCTTAAGTTCAAACACACGAACCC 59.667 41.667 1.63 0.00 42.00 4.11
7834 11148 5.064325 AGTCTTAAGTTCAAACACACGAACC 59.936 40.000 1.63 0.00 42.00 3.62
7839 11161 9.221775 CAACATAAGTCTTAAGTTCAAACACAC 57.778 33.333 9.68 0.00 0.00 3.82
7860 11182 4.954202 TCTCTCCCGTAGTAACATCAACAT 59.046 41.667 0.00 0.00 0.00 2.71
7875 11197 2.166459 TGCTCTACAATGTTCTCTCCCG 59.834 50.000 0.00 0.00 0.00 5.14
7887 11209 5.448225 CGACGAGTACCTTATTGCTCTACAA 60.448 44.000 0.00 0.00 44.01 2.41
7888 11210 4.034858 CGACGAGTACCTTATTGCTCTACA 59.965 45.833 0.00 0.00 0.00 2.74
7889 11211 4.272018 TCGACGAGTACCTTATTGCTCTAC 59.728 45.833 0.00 0.00 0.00 2.59
7890 11212 4.445453 TCGACGAGTACCTTATTGCTCTA 58.555 43.478 0.00 0.00 0.00 2.43
7891 11213 3.276857 TCGACGAGTACCTTATTGCTCT 58.723 45.455 0.00 0.00 0.00 4.09
7892 11214 3.065095 ACTCGACGAGTACCTTATTGCTC 59.935 47.826 28.28 0.00 41.51 4.26
7893 11215 3.015327 ACTCGACGAGTACCTTATTGCT 58.985 45.455 28.28 0.00 41.51 3.91
7894 11216 3.417690 ACTCGACGAGTACCTTATTGC 57.582 47.619 28.28 0.00 41.51 3.56
7895 11217 5.450171 CCATACTCGACGAGTACCTTATTG 58.550 45.833 33.61 25.94 46.06 1.90
7896 11218 4.023365 GCCATACTCGACGAGTACCTTATT 60.023 45.833 33.61 17.95 46.06 1.40
7897 11219 3.501445 GCCATACTCGACGAGTACCTTAT 59.499 47.826 33.61 19.53 46.06 1.73
7898 11220 2.874701 GCCATACTCGACGAGTACCTTA 59.125 50.000 33.61 18.20 46.06 2.69
7899 11221 1.674962 GCCATACTCGACGAGTACCTT 59.325 52.381 33.61 19.27 46.06 3.50
7900 11222 1.134159 AGCCATACTCGACGAGTACCT 60.134 52.381 33.61 26.03 46.06 3.08
7901 11223 1.307097 AGCCATACTCGACGAGTACC 58.693 55.000 33.61 24.61 46.06 3.34
7902 11224 3.417690 AAAGCCATACTCGACGAGTAC 57.582 47.619 33.61 22.98 46.06 2.73
7904 11226 4.097437 TGATAAAAGCCATACTCGACGAGT 59.903 41.667 31.23 31.23 45.54 4.18
7905 11227 4.607955 TGATAAAAGCCATACTCGACGAG 58.392 43.478 22.97 22.97 35.52 4.18
7906 11228 4.642445 TGATAAAAGCCATACTCGACGA 57.358 40.909 0.00 0.00 0.00 4.20
7907 11229 4.804139 ACTTGATAAAAGCCATACTCGACG 59.196 41.667 0.00 0.00 0.00 5.12
7908 11230 6.979238 ACTACTTGATAAAAGCCATACTCGAC 59.021 38.462 0.00 0.00 0.00 4.20
7909 11231 7.108841 ACTACTTGATAAAAGCCATACTCGA 57.891 36.000 0.00 0.00 0.00 4.04
7910 11232 7.277981 ACAACTACTTGATAAAAGCCATACTCG 59.722 37.037 0.00 0.00 0.00 4.18
7911 11233 8.494016 ACAACTACTTGATAAAAGCCATACTC 57.506 34.615 0.00 0.00 0.00 2.59
7912 11234 8.100791 TGACAACTACTTGATAAAAGCCATACT 58.899 33.333 0.00 0.00 0.00 2.12
7913 11235 8.263940 TGACAACTACTTGATAAAAGCCATAC 57.736 34.615 0.00 0.00 0.00 2.39
7915 11237 7.944729 ATGACAACTACTTGATAAAAGCCAT 57.055 32.000 0.00 0.00 0.00 4.40
7916 11238 8.856153 TTATGACAACTACTTGATAAAAGCCA 57.144 30.769 0.00 0.00 0.00 4.75
7924 11246 9.793259 TTTCTCCTTTTATGACAACTACTTGAT 57.207 29.630 0.00 0.00 0.00 2.57
7925 11247 9.621629 TTTTCTCCTTTTATGACAACTACTTGA 57.378 29.630 0.00 0.00 0.00 3.02
7972 11294 5.079689 TCTAATTACCTTCACACATGCGA 57.920 39.130 0.00 0.00 0.00 5.10
7973 11295 5.991328 ATCTAATTACCTTCACACATGCG 57.009 39.130 0.00 0.00 0.00 4.73
7997 11319 9.887629 CTTATAATAGTGGACGGAGAGAGTATA 57.112 37.037 0.00 0.00 0.00 1.47
8007 11335 7.041372 CCCAAAACATCTTATAATAGTGGACGG 60.041 40.741 0.00 0.00 0.00 4.79
8053 11381 6.421377 TTGTTCACTCATTCAATCCGTATG 57.579 37.500 0.00 0.00 0.00 2.39
8054 11382 6.429692 TGTTTGTTCACTCATTCAATCCGTAT 59.570 34.615 0.00 0.00 0.00 3.06
8058 11386 5.687285 GTGTGTTTGTTCACTCATTCAATCC 59.313 40.000 0.00 0.00 38.90 3.01
8069 11397 7.081976 AGACAAGTTTTAGTGTGTTTGTTCAC 58.918 34.615 0.00 0.00 38.63 3.18
8089 11417 6.778834 TCTAAATCGGGTGTATGTAGACAA 57.221 37.500 0.00 0.00 0.00 3.18
8121 11450 9.186323 CCTCTGTTCACTATTATAAGATGTTCG 57.814 37.037 0.00 0.00 0.00 3.95
8150 11479 6.434028 AGAGCTTGTAAATCACCAAATGCTAA 59.566 34.615 0.00 0.00 0.00 3.09
8214 11547 6.986250 AGAGAAAAATGGAACTAAAAGCCTG 58.014 36.000 0.00 0.00 0.00 4.85
8245 11578 8.477709 GTTACATGCTCATAGTATACAAACGAC 58.522 37.037 5.50 0.00 0.00 4.34
8281 11614 0.833287 ACATGAGCGCCCATCTAAGT 59.167 50.000 0.00 0.00 0.00 2.24
8502 11901 3.638484 TCGATATGCTACCATCAACACG 58.362 45.455 0.00 0.00 32.85 4.49
8534 11933 6.018343 ACAAAAACTACAAAATCGCAATTGGG 60.018 34.615 15.98 15.98 0.00 4.12
8535 11934 6.942891 ACAAAAACTACAAAATCGCAATTGG 58.057 32.000 7.72 0.00 0.00 3.16
8537 11936 9.909043 GTAAACAAAAACTACAAAATCGCAATT 57.091 25.926 0.00 0.00 0.00 2.32
8538 11937 8.263269 CGTAAACAAAAACTACAAAATCGCAAT 58.737 29.630 0.00 0.00 0.00 3.56
8539 11938 7.272948 ACGTAAACAAAAACTACAAAATCGCAA 59.727 29.630 0.00 0.00 0.00 4.85
8540 11939 6.746364 ACGTAAACAAAAACTACAAAATCGCA 59.254 30.769 0.00 0.00 0.00 5.10
8541 11940 7.046653 CACGTAAACAAAAACTACAAAATCGC 58.953 34.615 0.00 0.00 0.00 4.58
8542 11941 7.428761 TCCACGTAAACAAAAACTACAAAATCG 59.571 33.333 0.00 0.00 0.00 3.34
8543 11942 8.617761 TCCACGTAAACAAAAACTACAAAATC 57.382 30.769 0.00 0.00 0.00 2.17
8544 11943 9.026074 CATCCACGTAAACAAAAACTACAAAAT 57.974 29.630 0.00 0.00 0.00 1.82
8545 11944 8.242053 TCATCCACGTAAACAAAAACTACAAAA 58.758 29.630 0.00 0.00 0.00 2.44
8546 11945 7.759465 TCATCCACGTAAACAAAAACTACAAA 58.241 30.769 0.00 0.00 0.00 2.83
8547 11946 7.317842 TCATCCACGTAAACAAAAACTACAA 57.682 32.000 0.00 0.00 0.00 2.41
8551 11963 5.689961 GCATTCATCCACGTAAACAAAAACT 59.310 36.000 0.00 0.00 0.00 2.66
8552 11964 5.689961 AGCATTCATCCACGTAAACAAAAAC 59.310 36.000 0.00 0.00 0.00 2.43
8558 11970 2.477863 GCCAGCATTCATCCACGTAAAC 60.478 50.000 0.00 0.00 0.00 2.01
8658 12070 1.794222 GCAATTAGACGCGCCTGTT 59.206 52.632 5.73 0.00 0.00 3.16
8700 12117 1.838073 AAGCAATTCCGGACGGAGGT 61.838 55.000 13.64 5.52 46.06 3.85
8720 12137 8.582657 AGGTATAGATACATCTATTTCAGCGT 57.417 34.615 15.15 3.44 45.32 5.07
8721 12138 8.132362 GGAGGTATAGATACATCTATTTCAGCG 58.868 40.741 15.15 0.00 45.32 5.18
8722 12139 9.196139 AGGAGGTATAGATACATCTATTTCAGC 57.804 37.037 15.15 8.61 45.32 4.26
8734 12151 9.804758 CGGAATTATTTGAGGAGGTATAGATAC 57.195 37.037 0.00 0.00 0.00 2.24
8737 12154 7.014449 TCCGGAATTATTTGAGGAGGTATAGA 58.986 38.462 0.00 0.00 0.00 1.98
8738 12155 7.097834 GTCCGGAATTATTTGAGGAGGTATAG 58.902 42.308 5.23 0.00 0.00 1.31
8739 12156 6.294899 CGTCCGGAATTATTTGAGGAGGTATA 60.295 42.308 5.23 0.00 0.00 1.47
8740 12157 5.510861 CGTCCGGAATTATTTGAGGAGGTAT 60.511 44.000 5.23 0.00 0.00 2.73
8743 12160 3.131396 CGTCCGGAATTATTTGAGGAGG 58.869 50.000 5.23 1.68 0.00 4.30
8744 12161 3.131396 CCGTCCGGAATTATTTGAGGAG 58.869 50.000 5.23 0.00 37.50 3.69
8745 12162 2.767394 TCCGTCCGGAATTATTTGAGGA 59.233 45.455 5.23 1.22 42.05 3.71
8746 12163 3.131396 CTCCGTCCGGAATTATTTGAGG 58.869 50.000 5.23 0.00 44.66 3.86
8747 12164 3.131396 CCTCCGTCCGGAATTATTTGAG 58.869 50.000 5.23 4.50 44.66 3.02
8751 12176 2.770232 ACTTCCTCCGTCCGGAATTATT 59.230 45.455 5.23 0.00 44.66 1.40
8752 12177 2.395619 ACTTCCTCCGTCCGGAATTAT 58.604 47.619 5.23 0.00 44.66 1.28
8755 12180 1.341778 ACTACTTCCTCCGTCCGGAAT 60.342 52.381 5.23 0.00 44.66 3.01
8758 12183 0.455005 GAACTACTTCCTCCGTCCGG 59.545 60.000 0.00 0.00 0.00 5.14
8759 12184 1.132643 CAGAACTACTTCCTCCGTCCG 59.867 57.143 0.00 0.00 0.00 4.79
8761 12186 3.255149 TCAACAGAACTACTTCCTCCGTC 59.745 47.826 0.00 0.00 0.00 4.79
8774 12199 8.524870 AGCAATCAAACATTAATCAACAGAAC 57.475 30.769 0.00 0.00 0.00 3.01
8822 12247 7.335673 TGCCATCTTCGATAGTAAAATGAAACA 59.664 33.333 0.00 0.00 37.40 2.83
8841 12312 5.244626 AGTTTGCAAGTTATTTCTGCCATCT 59.755 36.000 0.00 0.00 0.00 2.90
8872 12505 9.408648 AGGAGAAGTTTGATTTGTTCTTCTTAA 57.591 29.630 7.08 0.00 42.85 1.85
8913 12546 9.017509 GGTGGATCATGTGTTCATTATTATCAT 57.982 33.333 0.00 0.00 31.15 2.45
8915 12548 7.521529 CGGTGGATCATGTGTTCATTATTATC 58.478 38.462 0.00 0.00 31.15 1.75
8920 12553 2.942376 GCGGTGGATCATGTGTTCATTA 59.058 45.455 0.00 0.00 31.15 1.90
8921 12554 1.745087 GCGGTGGATCATGTGTTCATT 59.255 47.619 0.00 0.00 31.15 2.57
8922 12555 1.382522 GCGGTGGATCATGTGTTCAT 58.617 50.000 0.00 0.00 34.21 2.57
8978 12611 2.378038 TGTTGCTGGGATTTCATAGGC 58.622 47.619 0.00 0.00 0.00 3.93
9036 12669 9.429359 GATTTCAGATATACGGTGATTTCAGAT 57.571 33.333 0.00 0.00 0.00 2.90
9037 12670 8.421002 TGATTTCAGATATACGGTGATTTCAGA 58.579 33.333 0.00 0.00 0.00 3.27
9038 12671 8.491152 GTGATTTCAGATATACGGTGATTTCAG 58.509 37.037 0.00 0.00 0.00 3.02
9039 12672 7.441157 GGTGATTTCAGATATACGGTGATTTCA 59.559 37.037 0.00 0.00 0.00 2.69
9040 12673 7.359264 CGGTGATTTCAGATATACGGTGATTTC 60.359 40.741 0.00 0.00 0.00 2.17
9041 12674 6.423905 CGGTGATTTCAGATATACGGTGATTT 59.576 38.462 0.00 0.00 0.00 2.17
9042 12675 5.926542 CGGTGATTTCAGATATACGGTGATT 59.073 40.000 0.00 0.00 0.00 2.57
9043 12676 5.010719 ACGGTGATTTCAGATATACGGTGAT 59.989 40.000 0.00 0.00 0.00 3.06
9044 12677 4.340097 ACGGTGATTTCAGATATACGGTGA 59.660 41.667 0.00 0.00 0.00 4.02
9045 12678 4.617959 ACGGTGATTTCAGATATACGGTG 58.382 43.478 0.00 0.00 0.00 4.94
9046 12679 4.931661 ACGGTGATTTCAGATATACGGT 57.068 40.909 0.00 0.00 0.00 4.83
9047 12680 5.805486 CCATACGGTGATTTCAGATATACGG 59.195 44.000 0.00 0.00 0.00 4.02
9048 12681 5.805486 CCCATACGGTGATTTCAGATATACG 59.195 44.000 0.00 0.00 0.00 3.06
9049 12682 5.581085 GCCCATACGGTGATTTCAGATATAC 59.419 44.000 0.00 0.00 0.00 1.47
9050 12683 5.623596 CGCCCATACGGTGATTTCAGATATA 60.624 44.000 0.00 0.00 45.94 0.86
9051 12684 4.579869 GCCCATACGGTGATTTCAGATAT 58.420 43.478 0.00 0.00 0.00 1.63
9082 12715 5.585445 CCTAGTACTAGTATCCATAGGCGTG 59.415 48.000 24.84 4.34 0.00 5.34
9092 12725 6.454795 ACACGTCTAGCCTAGTACTAGTATC 58.545 44.000 24.84 14.90 38.60 2.24
9106 12739 3.545624 CGAGTACACCATACACGTCTAGC 60.546 52.174 0.00 0.00 0.00 3.42
9194 12827 0.178970 ACTACCAGGTCACCGTCACT 60.179 55.000 0.00 0.00 0.00 3.41
9273 12906 2.267681 ATCGCGGAGTGGAAGACGAC 62.268 60.000 6.13 0.00 39.32 4.34
9341 12974 0.108615 GCTACGTCATGTGCCTCACT 60.109 55.000 0.00 0.00 35.11 3.41
9466 13099 2.261671 CGGAGGTGGACGTGAAGG 59.738 66.667 0.00 0.00 0.00 3.46
9476 13109 1.219124 CATCTGGGTCACGGAGGTG 59.781 63.158 0.00 0.00 45.78 4.00
9478 13111 2.903357 CCATCTGGGTCACGGAGG 59.097 66.667 0.00 0.00 38.03 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.