Multiple sequence alignment - TraesCS4A01G044400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G044400 chr4A 100.000 3221 0 0 1 3221 37006028 37009248 0.000000e+00 5949
1 TraesCS4A01G044400 chr4D 94.954 1843 59 15 470 2299 435626447 435628268 0.000000e+00 2857
2 TraesCS4A01G044400 chr4D 92.786 402 19 5 1 402 435626036 435626427 1.000000e-159 573
3 TraesCS4A01G044400 chr4D 89.753 283 19 4 2941 3221 435639298 435639572 1.420000e-93 353
4 TraesCS4A01G044400 chr4D 95.484 155 7 0 2294 2448 435628314 435628468 6.900000e-62 248
5 TraesCS4A01G044400 chr4D 89.000 100 11 0 2835 2934 435639117 435639216 1.210000e-24 124
6 TraesCS4A01G044400 chr4B 93.982 1695 58 24 624 2299 536894401 536896070 0.000000e+00 2525
7 TraesCS4A01G044400 chr4B 85.560 554 44 21 6 545 536893859 536894390 6.080000e-152 547
8 TraesCS4A01G044400 chr4B 88.608 158 11 5 2294 2448 536896112 536896265 5.490000e-43 185
9 TraesCS4A01G044400 chr2A 93.436 259 16 1 2452 2709 691653911 691654169 1.810000e-102 383
10 TraesCS4A01G044400 chr2A 92.278 259 19 1 2452 2709 10459505 10459247 1.830000e-97 366
11 TraesCS4A01G044400 chr7A 92.692 260 18 1 2452 2710 435004095 435003836 1.090000e-99 374
12 TraesCS4A01G044400 chr2D 92.692 260 18 1 2452 2710 395940453 395940194 1.090000e-99 374
13 TraesCS4A01G044400 chr2D 92.664 259 18 1 2452 2709 535240034 535240292 3.920000e-99 372
14 TraesCS4A01G044400 chr6A 92.278 259 19 1 2452 2709 24080904 24080646 1.830000e-97 366
15 TraesCS4A01G044400 chr1D 92.278 259 19 1 2452 2709 289424093 289424351 1.830000e-97 366
16 TraesCS4A01G044400 chrUn 91.923 260 18 3 2455 2712 29715030 29714772 8.490000e-96 361
17 TraesCS4A01G044400 chr6D 91.321 265 21 2 2452 2715 444471231 444470968 8.490000e-96 361


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G044400 chr4A 37006028 37009248 3220 False 5949.000000 5949 100.000000 1 3221 1 chr4A.!!$F1 3220
1 TraesCS4A01G044400 chr4D 435626036 435628468 2432 False 1226.000000 2857 94.408000 1 2448 3 chr4D.!!$F1 2447
2 TraesCS4A01G044400 chr4B 536893859 536896265 2406 False 1085.666667 2525 89.383333 6 2448 3 chr4B.!!$F1 2442

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
644 667 0.037303 CCTGCCACCACACTGATCTT 59.963 55.0 0.0 0.0 0.0 2.40 F
763 788 0.107017 AAGCCAAGACCCCATCATCG 60.107 55.0 0.0 0.0 0.0 3.84 F
849 875 0.740737 CATTTCACAATCGCCCTCCC 59.259 55.0 0.0 0.0 0.0 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1593 1640 1.153823 CGTGGTGAGGATGTCGACC 60.154 63.158 14.12 0.00 0.00 4.79 R
1845 1892 1.375523 CAGCTTGTACGTCACCCCC 60.376 63.158 0.00 0.00 0.00 5.40 R
2342 2440 1.753078 GCCGGGGAAGGAATTCACC 60.753 63.158 2.18 7.33 41.12 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 1.312371 TGCGCCCATGCTACTTTTCC 61.312 55.000 4.18 0.00 35.36 3.13
54 55 0.588252 CCCGATCATGCATCCGTTTC 59.412 55.000 0.00 0.00 0.00 2.78
138 139 1.065199 CAAGCTTAGCCAGGACCATCA 60.065 52.381 0.00 0.00 0.00 3.07
139 140 1.516110 AGCTTAGCCAGGACCATCAT 58.484 50.000 0.00 0.00 0.00 2.45
140 141 1.419387 AGCTTAGCCAGGACCATCATC 59.581 52.381 0.00 0.00 0.00 2.92
209 210 1.595382 CCCAGCCGATCGAATCCAC 60.595 63.158 18.66 0.00 0.00 4.02
214 215 0.938168 GCCGATCGAATCCACCGTAC 60.938 60.000 18.66 0.00 0.00 3.67
294 295 4.194640 TCTTCCACTTAGCATCAATCAGC 58.805 43.478 0.00 0.00 0.00 4.26
296 297 2.507058 TCCACTTAGCATCAATCAGCCT 59.493 45.455 0.00 0.00 0.00 4.58
297 298 2.877168 CCACTTAGCATCAATCAGCCTC 59.123 50.000 0.00 0.00 0.00 4.70
299 300 2.158696 ACTTAGCATCAATCAGCCTCCC 60.159 50.000 0.00 0.00 0.00 4.30
300 301 0.767375 TAGCATCAATCAGCCTCCCC 59.233 55.000 0.00 0.00 0.00 4.81
301 302 1.228228 GCATCAATCAGCCTCCCCA 59.772 57.895 0.00 0.00 0.00 4.96
431 432 9.719279 TTGTAATTGTTTACTTTCTACGTTTGG 57.281 29.630 0.00 0.00 38.81 3.28
437 438 9.934190 TTGTTTACTTTCTACGTTTGGAATTAC 57.066 29.630 0.00 0.00 0.00 1.89
438 439 9.328845 TGTTTACTTTCTACGTTTGGAATTACT 57.671 29.630 0.00 0.00 0.00 2.24
441 442 7.797038 ACTTTCTACGTTTGGAATTACTTGT 57.203 32.000 0.00 0.00 0.00 3.16
444 445 7.789273 TTCTACGTTTGGAATTACTTGTCAA 57.211 32.000 0.00 0.00 0.00 3.18
446 447 7.632721 TCTACGTTTGGAATTACTTGTCAAAC 58.367 34.615 0.00 0.00 41.89 2.93
478 479 5.652994 TTTTTGTGTGGCAAACTCTTAGT 57.347 34.783 9.62 0.00 45.70 2.24
479 480 4.630894 TTTGTGTGGCAAACTCTTAGTG 57.369 40.909 9.62 0.00 41.68 2.74
499 501 9.817809 CTTAGTGCTATAATTTAGTTGGTCAGA 57.182 33.333 0.00 0.00 0.00 3.27
558 578 3.488047 CCATACAGTATGCAAGCTTGTGC 60.488 47.826 26.55 15.65 42.53 4.57
582 602 2.551032 CTGAAATTCTCAGTGTGCAGCA 59.449 45.455 0.00 0.00 45.76 4.41
593 613 1.003652 GTGTGCAGCACAAATTTTGGC 60.004 47.619 29.84 11.12 46.28 4.52
596 616 2.733026 GTGCAGCACAAATTTTGGCTAG 59.267 45.455 21.22 14.99 36.08 3.42
605 625 5.638657 CACAAATTTTGGCTAGCTATTGCAA 59.361 36.000 15.72 0.00 36.93 4.08
632 655 2.029518 GCCTTTTGCACCTGCCAC 59.970 61.111 0.00 0.00 41.18 5.01
644 667 0.037303 CCTGCCACCACACTGATCTT 59.963 55.000 0.00 0.00 0.00 2.40
646 669 2.350522 CTGCCACCACACTGATCTTAC 58.649 52.381 0.00 0.00 0.00 2.34
664 689 1.975407 CCCAGGAGGCAAGTGCAAG 60.975 63.158 5.52 0.00 44.36 4.01
722 747 4.400567 ACAGAATATTTCAGGCCTCTTTGC 59.599 41.667 0.00 0.00 0.00 3.68
763 788 0.107017 AAGCCAAGACCCCATCATCG 60.107 55.000 0.00 0.00 0.00 3.84
789 814 4.956778 CGAAACGAAACGAAATACACAACA 59.043 37.500 0.00 0.00 0.00 3.33
791 816 6.543187 AAACGAAACGAAATACACAACAAC 57.457 33.333 0.00 0.00 0.00 3.32
842 867 4.039703 GCCATCATCACATTTCACAATCG 58.960 43.478 0.00 0.00 0.00 3.34
849 875 0.740737 CATTTCACAATCGCCCTCCC 59.259 55.000 0.00 0.00 0.00 4.30
901 927 1.138069 CAGACAAAACCCAACCCAACC 59.862 52.381 0.00 0.00 0.00 3.77
982 1029 4.394712 CCAGCTCCACGGGACACC 62.395 72.222 0.00 0.00 35.22 4.16
1020 1067 4.075793 AGGAGTGGCGGCCCTCTA 62.076 66.667 26.18 5.24 35.18 2.43
1401 1448 2.584418 CTCGACATCCCGCTGCTG 60.584 66.667 0.00 0.00 0.00 4.41
2226 2273 2.851071 CGCCGCCTTCTAGCTAGCT 61.851 63.158 23.12 23.12 0.00 3.32
2227 2274 1.516365 CGCCGCCTTCTAGCTAGCTA 61.516 60.000 22.85 22.85 0.00 3.32
2228 2275 0.242555 GCCGCCTTCTAGCTAGCTAG 59.757 60.000 36.20 36.20 45.38 3.42
2342 2440 0.107831 TGGTTTGTCGGAAGGTGAGG 59.892 55.000 0.00 0.00 0.00 3.86
2355 2453 1.636003 AGGTGAGGGTGAATTCCTTCC 59.364 52.381 2.27 3.15 34.21 3.46
2424 2527 4.583489 TGTCTTTCTCGTCCTAGTTCTTGT 59.417 41.667 0.00 0.00 0.00 3.16
2428 2531 5.373981 TTCTCGTCCTAGTTCTTGTTCTC 57.626 43.478 0.00 0.00 0.00 2.87
2454 2557 9.841295 CTAGTTCTATATGATAGTACTCCCTCC 57.159 40.741 0.00 0.00 0.00 4.30
2455 2558 7.645002 AGTTCTATATGATAGTACTCCCTCCC 58.355 42.308 0.00 0.00 0.00 4.30
2456 2559 7.466213 AGTTCTATATGATAGTACTCCCTCCCT 59.534 40.741 0.00 0.00 0.00 4.20
2457 2560 7.848821 TCTATATGATAGTACTCCCTCCCTT 57.151 40.000 0.00 0.00 0.00 3.95
2458 2561 7.874252 TCTATATGATAGTACTCCCTCCCTTC 58.126 42.308 0.00 0.00 0.00 3.46
2459 2562 3.225177 TGATAGTACTCCCTCCCTTCG 57.775 52.381 0.00 0.00 0.00 3.79
2460 2563 2.512896 TGATAGTACTCCCTCCCTTCGT 59.487 50.000 0.00 0.00 0.00 3.85
2461 2564 3.053095 TGATAGTACTCCCTCCCTTCGTT 60.053 47.826 0.00 0.00 0.00 3.85
2462 2565 2.322339 AGTACTCCCTCCCTTCGTTT 57.678 50.000 0.00 0.00 0.00 3.60
2463 2566 2.617658 AGTACTCCCTCCCTTCGTTTT 58.382 47.619 0.00 0.00 0.00 2.43
2464 2567 2.977580 AGTACTCCCTCCCTTCGTTTTT 59.022 45.455 0.00 0.00 0.00 1.94
2465 2568 4.162651 AGTACTCCCTCCCTTCGTTTTTA 58.837 43.478 0.00 0.00 0.00 1.52
2466 2569 4.781621 AGTACTCCCTCCCTTCGTTTTTAT 59.218 41.667 0.00 0.00 0.00 1.40
2467 2570 4.652679 ACTCCCTCCCTTCGTTTTTATT 57.347 40.909 0.00 0.00 0.00 1.40
2468 2571 4.994282 ACTCCCTCCCTTCGTTTTTATTT 58.006 39.130 0.00 0.00 0.00 1.40
2469 2572 6.130692 ACTCCCTCCCTTCGTTTTTATTTA 57.869 37.500 0.00 0.00 0.00 1.40
2470 2573 5.942236 ACTCCCTCCCTTCGTTTTTATTTAC 59.058 40.000 0.00 0.00 0.00 2.01
2471 2574 6.130692 TCCCTCCCTTCGTTTTTATTTACT 57.869 37.500 0.00 0.00 0.00 2.24
2472 2575 6.175471 TCCCTCCCTTCGTTTTTATTTACTC 58.825 40.000 0.00 0.00 0.00 2.59
2473 2576 6.013119 TCCCTCCCTTCGTTTTTATTTACTCT 60.013 38.462 0.00 0.00 0.00 3.24
2474 2577 6.093633 CCCTCCCTTCGTTTTTATTTACTCTG 59.906 42.308 0.00 0.00 0.00 3.35
2475 2578 6.403309 CCTCCCTTCGTTTTTATTTACTCTGC 60.403 42.308 0.00 0.00 0.00 4.26
2476 2579 5.998981 TCCCTTCGTTTTTATTTACTCTGCA 59.001 36.000 0.00 0.00 0.00 4.41
2477 2580 6.657541 TCCCTTCGTTTTTATTTACTCTGCAT 59.342 34.615 0.00 0.00 0.00 3.96
2478 2581 7.825270 TCCCTTCGTTTTTATTTACTCTGCATA 59.175 33.333 0.00 0.00 0.00 3.14
2479 2582 8.621286 CCCTTCGTTTTTATTTACTCTGCATAT 58.379 33.333 0.00 0.00 0.00 1.78
2495 2598 9.236006 ACTCTGCATATTAGTTTTGATCAAAGT 57.764 29.630 19.64 14.00 32.41 2.66
2496 2599 9.713740 CTCTGCATATTAGTTTTGATCAAAGTC 57.286 33.333 19.64 16.31 30.16 3.01
2497 2600 9.230122 TCTGCATATTAGTTTTGATCAAAGTCA 57.770 29.630 19.64 4.05 30.16 3.41
2498 2601 9.844790 CTGCATATTAGTTTTGATCAAAGTCAA 57.155 29.630 19.64 14.55 36.38 3.18
2499 2602 9.844790 TGCATATTAGTTTTGATCAAAGTCAAG 57.155 29.630 19.64 8.64 39.13 3.02
2500 2603 8.801913 GCATATTAGTTTTGATCAAAGTCAAGC 58.198 33.333 19.64 13.61 39.13 4.01
2516 2619 7.801716 AAGTCAAGCTTTGTATACTTTGACA 57.198 32.000 23.33 1.63 32.57 3.58
2517 2620 7.801716 AGTCAAGCTTTGTATACTTTGACAA 57.198 32.000 23.33 6.51 33.81 3.18
2518 2621 8.220755 AGTCAAGCTTTGTATACTTTGACAAA 57.779 30.769 23.33 0.00 41.90 2.83
2684 2787 6.503616 GACTTCAGTCAACTCTAATATGCG 57.496 41.667 1.86 0.00 44.18 4.73
2685 2788 5.352284 ACTTCAGTCAACTCTAATATGCGG 58.648 41.667 0.00 0.00 0.00 5.69
2686 2789 5.127194 ACTTCAGTCAACTCTAATATGCGGA 59.873 40.000 0.00 0.00 0.00 5.54
2687 2790 5.188327 TCAGTCAACTCTAATATGCGGAG 57.812 43.478 0.00 0.00 0.00 4.63
2688 2791 4.645136 TCAGTCAACTCTAATATGCGGAGT 59.355 41.667 0.00 0.00 41.37 3.85
2689 2792 5.826208 TCAGTCAACTCTAATATGCGGAGTA 59.174 40.000 6.10 0.00 39.09 2.59
2690 2793 6.320418 TCAGTCAACTCTAATATGCGGAGTAA 59.680 38.462 6.10 0.00 39.09 2.24
2691 2794 6.978659 CAGTCAACTCTAATATGCGGAGTAAA 59.021 38.462 6.10 0.00 39.09 2.01
2692 2795 7.653713 CAGTCAACTCTAATATGCGGAGTAAAT 59.346 37.037 6.10 0.00 39.09 1.40
2693 2796 8.857098 AGTCAACTCTAATATGCGGAGTAAATA 58.143 33.333 6.10 0.00 39.09 1.40
2694 2797 9.472361 GTCAACTCTAATATGCGGAGTAAATAA 57.528 33.333 6.10 0.00 39.09 1.40
2699 2802 9.793245 CTCTAATATGCGGAGTAAATAAAAACG 57.207 33.333 0.00 0.00 0.00 3.60
2700 2803 8.767085 TCTAATATGCGGAGTAAATAAAAACGG 58.233 33.333 0.00 0.00 0.00 4.44
2701 2804 7.556733 AATATGCGGAGTAAATAAAAACGGA 57.443 32.000 0.00 0.00 0.00 4.69
2702 2805 4.932268 TGCGGAGTAAATAAAAACGGAG 57.068 40.909 0.00 0.00 0.00 4.63
2703 2806 3.685756 TGCGGAGTAAATAAAAACGGAGG 59.314 43.478 0.00 0.00 0.00 4.30
2704 2807 3.064408 GCGGAGTAAATAAAAACGGAGGG 59.936 47.826 0.00 0.00 0.00 4.30
2705 2808 4.506758 CGGAGTAAATAAAAACGGAGGGA 58.493 43.478 0.00 0.00 0.00 4.20
2706 2809 4.569564 CGGAGTAAATAAAAACGGAGGGAG 59.430 45.833 0.00 0.00 0.00 4.30
2707 2810 5.494724 GGAGTAAATAAAAACGGAGGGAGT 58.505 41.667 0.00 0.00 0.00 3.85
2708 2811 6.627953 CGGAGTAAATAAAAACGGAGGGAGTA 60.628 42.308 0.00 0.00 0.00 2.59
2709 2812 7.278135 GGAGTAAATAAAAACGGAGGGAGTAT 58.722 38.462 0.00 0.00 0.00 2.12
2710 2813 8.424133 GGAGTAAATAAAAACGGAGGGAGTATA 58.576 37.037 0.00 0.00 0.00 1.47
2711 2814 9.993454 GAGTAAATAAAAACGGAGGGAGTATAT 57.007 33.333 0.00 0.00 0.00 0.86
2722 2825 9.543231 AACGGAGGGAGTATATAGATAAATTCA 57.457 33.333 0.00 0.00 0.00 2.57
2723 2826 9.716556 ACGGAGGGAGTATATAGATAAATTCAT 57.283 33.333 0.00 0.00 0.00 2.57
2724 2827 9.973450 CGGAGGGAGTATATAGATAAATTCATG 57.027 37.037 0.00 0.00 0.00 3.07
2738 2841 9.013229 AGATAAATTCATGTACAAGCTGTTTCA 57.987 29.630 0.00 0.00 0.00 2.69
2739 2842 8.970691 ATAAATTCATGTACAAGCTGTTTCAC 57.029 30.769 0.00 0.00 0.00 3.18
2740 2843 4.829064 TTCATGTACAAGCTGTTTCACC 57.171 40.909 0.00 0.00 0.00 4.02
2741 2844 4.085357 TCATGTACAAGCTGTTTCACCT 57.915 40.909 0.00 0.00 0.00 4.00
2742 2845 4.460263 TCATGTACAAGCTGTTTCACCTT 58.540 39.130 0.00 0.00 0.00 3.50
2743 2846 4.887071 TCATGTACAAGCTGTTTCACCTTT 59.113 37.500 0.00 0.00 0.00 3.11
2744 2847 5.359576 TCATGTACAAGCTGTTTCACCTTTT 59.640 36.000 0.00 0.00 0.00 2.27
2745 2848 5.243426 TGTACAAGCTGTTTCACCTTTTC 57.757 39.130 0.00 0.00 0.00 2.29
2746 2849 4.702612 TGTACAAGCTGTTTCACCTTTTCA 59.297 37.500 0.00 0.00 0.00 2.69
2747 2850 4.376340 ACAAGCTGTTTCACCTTTTCAG 57.624 40.909 0.00 0.00 0.00 3.02
2748 2851 3.763897 ACAAGCTGTTTCACCTTTTCAGT 59.236 39.130 0.00 0.00 0.00 3.41
2749 2852 4.220602 ACAAGCTGTTTCACCTTTTCAGTT 59.779 37.500 0.00 0.00 0.00 3.16
2750 2853 5.170748 CAAGCTGTTTCACCTTTTCAGTTT 58.829 37.500 0.00 0.00 31.81 2.66
2751 2854 4.998788 AGCTGTTTCACCTTTTCAGTTTC 58.001 39.130 0.00 0.00 0.00 2.78
2752 2855 4.706962 AGCTGTTTCACCTTTTCAGTTTCT 59.293 37.500 0.00 0.00 0.00 2.52
2753 2856 5.037385 GCTGTTTCACCTTTTCAGTTTCTC 58.963 41.667 0.00 0.00 0.00 2.87
2754 2857 5.393027 GCTGTTTCACCTTTTCAGTTTCTCA 60.393 40.000 0.00 0.00 0.00 3.27
2755 2858 6.194796 TGTTTCACCTTTTCAGTTTCTCAG 57.805 37.500 0.00 0.00 0.00 3.35
2756 2859 5.710099 TGTTTCACCTTTTCAGTTTCTCAGT 59.290 36.000 0.00 0.00 0.00 3.41
2757 2860 6.882140 TGTTTCACCTTTTCAGTTTCTCAGTA 59.118 34.615 0.00 0.00 0.00 2.74
2758 2861 7.392113 TGTTTCACCTTTTCAGTTTCTCAGTAA 59.608 33.333 0.00 0.00 0.00 2.24
2759 2862 7.931578 TTCACCTTTTCAGTTTCTCAGTAAA 57.068 32.000 0.00 0.00 0.00 2.01
2760 2863 8.519799 TTCACCTTTTCAGTTTCTCAGTAAAT 57.480 30.769 0.00 0.00 0.00 1.40
2761 2864 8.519799 TCACCTTTTCAGTTTCTCAGTAAATT 57.480 30.769 0.00 0.00 0.00 1.82
2762 2865 8.966868 TCACCTTTTCAGTTTCTCAGTAAATTT 58.033 29.630 0.00 0.00 0.00 1.82
2763 2866 9.586435 CACCTTTTCAGTTTCTCAGTAAATTTT 57.414 29.630 0.00 0.00 0.00 1.82
2766 2869 9.906111 CTTTTCAGTTTCTCAGTAAATTTTTGC 57.094 29.630 0.00 0.00 0.00 3.68
2767 2870 8.994429 TTTCAGTTTCTCAGTAAATTTTTGCA 57.006 26.923 0.00 0.00 0.00 4.08
2768 2871 7.985634 TCAGTTTCTCAGTAAATTTTTGCAC 57.014 32.000 0.00 0.00 0.00 4.57
2769 2872 6.978080 TCAGTTTCTCAGTAAATTTTTGCACC 59.022 34.615 0.00 0.00 0.00 5.01
2770 2873 6.980397 CAGTTTCTCAGTAAATTTTTGCACCT 59.020 34.615 0.00 0.00 0.00 4.00
2771 2874 8.134895 CAGTTTCTCAGTAAATTTTTGCACCTA 58.865 33.333 0.00 0.00 0.00 3.08
2772 2875 8.135529 AGTTTCTCAGTAAATTTTTGCACCTAC 58.864 33.333 0.00 0.00 0.00 3.18
2773 2876 7.817418 TTCTCAGTAAATTTTTGCACCTACT 57.183 32.000 0.00 0.00 0.00 2.57
2774 2877 7.435068 TCTCAGTAAATTTTTGCACCTACTC 57.565 36.000 0.00 0.00 0.00 2.59
2775 2878 6.147164 TCTCAGTAAATTTTTGCACCTACTCG 59.853 38.462 0.00 0.00 0.00 4.18
2776 2879 5.992829 TCAGTAAATTTTTGCACCTACTCGA 59.007 36.000 0.00 0.00 0.00 4.04
2777 2880 6.653320 TCAGTAAATTTTTGCACCTACTCGAT 59.347 34.615 0.00 0.00 0.00 3.59
2778 2881 7.174253 TCAGTAAATTTTTGCACCTACTCGATT 59.826 33.333 0.00 0.00 0.00 3.34
2779 2882 7.481798 CAGTAAATTTTTGCACCTACTCGATTC 59.518 37.037 0.00 0.00 0.00 2.52
2780 2883 6.575162 AAATTTTTGCACCTACTCGATTCT 57.425 33.333 0.00 0.00 0.00 2.40
2781 2884 5.803020 ATTTTTGCACCTACTCGATTCTC 57.197 39.130 0.00 0.00 0.00 2.87
2782 2885 2.561733 TTGCACCTACTCGATTCTCG 57.438 50.000 0.00 0.00 42.10 4.04
2783 2886 0.738975 TGCACCTACTCGATTCTCGG 59.261 55.000 0.00 0.00 40.88 4.63
2784 2887 0.739561 GCACCTACTCGATTCTCGGT 59.260 55.000 0.00 0.00 40.88 4.69
2785 2888 1.945394 GCACCTACTCGATTCTCGGTA 59.055 52.381 0.00 0.00 40.88 4.02
2786 2889 2.357009 GCACCTACTCGATTCTCGGTAA 59.643 50.000 0.00 0.00 40.88 2.85
2787 2890 3.181493 GCACCTACTCGATTCTCGGTAAA 60.181 47.826 0.00 0.00 40.88 2.01
2788 2891 4.599047 CACCTACTCGATTCTCGGTAAAG 58.401 47.826 0.00 0.00 40.88 1.85
2789 2892 4.334759 CACCTACTCGATTCTCGGTAAAGA 59.665 45.833 0.00 0.00 40.88 2.52
2790 2893 4.946157 ACCTACTCGATTCTCGGTAAAGAA 59.054 41.667 0.00 0.00 40.88 2.52
2791 2894 5.416952 ACCTACTCGATTCTCGGTAAAGAAA 59.583 40.000 0.00 0.00 40.88 2.52
2792 2895 5.742926 CCTACTCGATTCTCGGTAAAGAAAC 59.257 44.000 0.00 0.00 40.88 2.78
2793 2896 4.492611 ACTCGATTCTCGGTAAAGAAACC 58.507 43.478 0.00 0.00 40.88 3.27
2794 2897 4.021719 ACTCGATTCTCGGTAAAGAAACCA 60.022 41.667 0.00 0.00 40.88 3.67
2795 2898 4.240096 TCGATTCTCGGTAAAGAAACCAC 58.760 43.478 0.00 0.00 40.88 4.16
2796 2899 3.060363 CGATTCTCGGTAAAGAAACCACG 59.940 47.826 0.00 0.00 38.69 4.94
2797 2900 3.457610 TTCTCGGTAAAGAAACCACGT 57.542 42.857 0.00 0.00 39.71 4.49
2798 2901 4.582701 TTCTCGGTAAAGAAACCACGTA 57.417 40.909 0.00 0.00 39.71 3.57
2799 2902 4.582701 TCTCGGTAAAGAAACCACGTAA 57.417 40.909 0.00 0.00 39.71 3.18
2800 2903 4.298332 TCTCGGTAAAGAAACCACGTAAC 58.702 43.478 0.00 0.00 39.71 2.50
2801 2904 3.049206 TCGGTAAAGAAACCACGTAACG 58.951 45.455 0.00 0.00 39.71 3.18
2802 2905 3.049206 CGGTAAAGAAACCACGTAACGA 58.951 45.455 0.00 0.00 39.71 3.85
2803 2906 3.489047 CGGTAAAGAAACCACGTAACGAA 59.511 43.478 0.00 0.00 39.71 3.85
2804 2907 4.150451 CGGTAAAGAAACCACGTAACGAAT 59.850 41.667 0.00 0.00 39.71 3.34
2805 2908 5.333263 CGGTAAAGAAACCACGTAACGAATT 60.333 40.000 0.00 0.00 39.71 2.17
2806 2909 5.847515 GGTAAAGAAACCACGTAACGAATTG 59.152 40.000 0.00 0.00 39.50 2.32
2807 2910 5.488645 AAAGAAACCACGTAACGAATTGT 57.511 34.783 0.00 0.00 0.00 2.71
2808 2911 4.461992 AGAAACCACGTAACGAATTGTG 57.538 40.909 0.00 0.00 0.00 3.33
2809 2912 4.121317 AGAAACCACGTAACGAATTGTGA 58.879 39.130 0.00 0.00 34.29 3.58
2810 2913 4.571580 AGAAACCACGTAACGAATTGTGAA 59.428 37.500 0.00 0.00 34.29 3.18
2811 2914 5.237779 AGAAACCACGTAACGAATTGTGAAT 59.762 36.000 0.00 0.00 34.29 2.57
2812 2915 6.424509 AGAAACCACGTAACGAATTGTGAATA 59.575 34.615 0.00 0.00 34.29 1.75
2813 2916 6.542574 AACCACGTAACGAATTGTGAATAA 57.457 33.333 0.00 0.00 34.29 1.40
2814 2917 6.542574 ACCACGTAACGAATTGTGAATAAA 57.457 33.333 0.00 0.00 34.29 1.40
2815 2918 6.595794 ACCACGTAACGAATTGTGAATAAAG 58.404 36.000 0.00 0.00 34.29 1.85
2816 2919 6.019152 CCACGTAACGAATTGTGAATAAAGG 58.981 40.000 0.00 0.00 34.29 3.11
2817 2920 6.347888 CCACGTAACGAATTGTGAATAAAGGT 60.348 38.462 0.00 0.00 34.29 3.50
2818 2921 6.735063 CACGTAACGAATTGTGAATAAAGGTC 59.265 38.462 0.00 0.00 34.29 3.85
2819 2922 6.647895 ACGTAACGAATTGTGAATAAAGGTCT 59.352 34.615 0.00 0.00 0.00 3.85
2820 2923 7.148689 ACGTAACGAATTGTGAATAAAGGTCTC 60.149 37.037 0.00 0.00 0.00 3.36
2821 2924 6.496338 AACGAATTGTGAATAAAGGTCTCC 57.504 37.500 0.00 0.00 0.00 3.71
2822 2925 5.805728 ACGAATTGTGAATAAAGGTCTCCT 58.194 37.500 0.00 0.00 33.87 3.69
2833 2936 3.884037 AAGGTCTCCTTTGGTTCATGT 57.116 42.857 0.00 0.00 41.69 3.21
2834 2937 3.146104 AGGTCTCCTTTGGTTCATGTG 57.854 47.619 0.00 0.00 0.00 3.21
2835 2938 2.711009 AGGTCTCCTTTGGTTCATGTGA 59.289 45.455 0.00 0.00 0.00 3.58
2836 2939 3.331889 AGGTCTCCTTTGGTTCATGTGAT 59.668 43.478 0.00 0.00 0.00 3.06
2837 2940 4.536090 AGGTCTCCTTTGGTTCATGTGATA 59.464 41.667 0.00 0.00 0.00 2.15
2838 2941 4.878397 GGTCTCCTTTGGTTCATGTGATAG 59.122 45.833 0.00 0.00 0.00 2.08
2839 2942 4.878397 GTCTCCTTTGGTTCATGTGATAGG 59.122 45.833 0.00 0.00 0.00 2.57
2840 2943 4.782691 TCTCCTTTGGTTCATGTGATAGGA 59.217 41.667 0.00 0.00 0.00 2.94
2841 2944 5.250543 TCTCCTTTGGTTCATGTGATAGGAA 59.749 40.000 0.00 0.00 30.72 3.36
2842 2945 6.069440 TCTCCTTTGGTTCATGTGATAGGAAT 60.069 38.462 0.00 0.00 30.99 3.01
2843 2946 7.127186 TCTCCTTTGGTTCATGTGATAGGAATA 59.873 37.037 0.00 0.00 30.99 1.75
2844 2947 7.815383 TCCTTTGGTTCATGTGATAGGAATAT 58.185 34.615 0.00 0.00 30.99 1.28
2845 2948 7.939039 TCCTTTGGTTCATGTGATAGGAATATC 59.061 37.037 0.00 0.00 30.99 1.63
2846 2949 7.720957 CCTTTGGTTCATGTGATAGGAATATCA 59.279 37.037 0.00 0.00 30.99 2.15
2847 2950 9.293404 CTTTGGTTCATGTGATAGGAATATCAT 57.707 33.333 1.60 0.00 38.55 2.45
2878 2981 7.912056 AGAAAAATCACAGAAATCGAGATGA 57.088 32.000 0.00 0.00 0.00 2.92
2879 2982 7.746929 AGAAAAATCACAGAAATCGAGATGAC 58.253 34.615 0.00 0.00 0.00 3.06
2880 2983 7.388776 AGAAAAATCACAGAAATCGAGATGACA 59.611 33.333 0.00 0.00 0.00 3.58
2881 2984 7.621428 AAAATCACAGAAATCGAGATGACAT 57.379 32.000 0.00 0.00 0.00 3.06
2882 2985 6.600246 AATCACAGAAATCGAGATGACATG 57.400 37.500 0.00 0.00 0.00 3.21
2883 2986 5.077134 TCACAGAAATCGAGATGACATGT 57.923 39.130 0.00 0.00 0.00 3.21
2884 2987 4.866486 TCACAGAAATCGAGATGACATGTG 59.134 41.667 1.15 11.46 37.46 3.21
2885 2988 4.628766 CACAGAAATCGAGATGACATGTGT 59.371 41.667 1.15 0.00 32.82 3.72
2886 2989 4.867047 ACAGAAATCGAGATGACATGTGTC 59.133 41.667 1.15 6.21 44.97 3.67
2887 2990 5.107824 CAGAAATCGAGATGACATGTGTCT 58.892 41.667 1.15 6.56 44.99 3.41
2888 2991 5.231779 CAGAAATCGAGATGACATGTGTCTC 59.768 44.000 20.39 20.39 44.99 3.36
2889 2992 4.725790 AATCGAGATGACATGTGTCTCA 57.274 40.909 25.73 17.67 44.99 3.27
2890 2993 4.725790 ATCGAGATGACATGTGTCTCAA 57.274 40.909 25.73 15.64 44.99 3.02
2891 2994 4.519540 TCGAGATGACATGTGTCTCAAA 57.480 40.909 25.73 16.19 44.99 2.69
2892 2995 5.077134 TCGAGATGACATGTGTCTCAAAT 57.923 39.130 25.73 5.78 44.99 2.32
2893 2996 5.105063 TCGAGATGACATGTGTCTCAAATC 58.895 41.667 25.73 8.42 44.99 2.17
2894 2997 4.269603 CGAGATGACATGTGTCTCAAATCC 59.730 45.833 25.73 9.00 44.99 3.01
2895 2998 5.426504 GAGATGACATGTGTCTCAAATCCT 58.573 41.667 23.35 6.37 44.99 3.24
2896 2999 6.550938 AGATGACATGTGTCTCAAATCCTA 57.449 37.500 1.15 0.00 44.99 2.94
2897 3000 7.134362 AGATGACATGTGTCTCAAATCCTAT 57.866 36.000 1.15 0.00 44.99 2.57
2898 3001 8.255111 AGATGACATGTGTCTCAAATCCTATA 57.745 34.615 1.15 0.00 44.99 1.31
2899 3002 8.878211 AGATGACATGTGTCTCAAATCCTATAT 58.122 33.333 1.15 0.00 44.99 0.86
2900 3003 9.499479 GATGACATGTGTCTCAAATCCTATATT 57.501 33.333 1.15 0.00 44.99 1.28
2901 3004 8.893219 TGACATGTGTCTCAAATCCTATATTC 57.107 34.615 1.15 0.00 44.99 1.75
2902 3005 8.485392 TGACATGTGTCTCAAATCCTATATTCA 58.515 33.333 1.15 0.00 44.99 2.57
2903 3006 9.330063 GACATGTGTCTCAAATCCTATATTCAA 57.670 33.333 1.15 0.00 41.65 2.69
2904 3007 9.685276 ACATGTGTCTCAAATCCTATATTCAAA 57.315 29.630 0.00 0.00 0.00 2.69
2910 3013 9.922305 GTCTCAAATCCTATATTCAAAAAGACG 57.078 33.333 0.00 0.00 0.00 4.18
2911 3014 9.667107 TCTCAAATCCTATATTCAAAAAGACGT 57.333 29.630 0.00 0.00 0.00 4.34
2917 3020 8.433421 TCCTATATTCAAAAAGACGTTCATCC 57.567 34.615 0.00 0.00 0.00 3.51
2918 3021 8.265055 TCCTATATTCAAAAAGACGTTCATCCT 58.735 33.333 0.00 0.00 0.00 3.24
2919 3022 8.338259 CCTATATTCAAAAAGACGTTCATCCTG 58.662 37.037 0.00 0.00 0.00 3.86
2920 3023 3.896648 TCAAAAAGACGTTCATCCTGC 57.103 42.857 0.00 0.00 0.00 4.85
2921 3024 3.476552 TCAAAAAGACGTTCATCCTGCT 58.523 40.909 0.00 0.00 0.00 4.24
2922 3025 3.882888 TCAAAAAGACGTTCATCCTGCTT 59.117 39.130 0.00 0.00 0.00 3.91
2923 3026 4.338118 TCAAAAAGACGTTCATCCTGCTTT 59.662 37.500 0.00 0.00 0.00 3.51
2924 3027 5.529430 TCAAAAAGACGTTCATCCTGCTTTA 59.471 36.000 0.00 0.00 0.00 1.85
2925 3028 6.206634 TCAAAAAGACGTTCATCCTGCTTTAT 59.793 34.615 0.00 0.00 0.00 1.40
2926 3029 7.389330 TCAAAAAGACGTTCATCCTGCTTTATA 59.611 33.333 0.00 0.00 0.00 0.98
2927 3030 7.865706 AAAAGACGTTCATCCTGCTTTATAT 57.134 32.000 0.00 0.00 0.00 0.86
2928 3031 8.958119 AAAAGACGTTCATCCTGCTTTATATA 57.042 30.769 0.00 0.00 0.00 0.86
2929 3032 9.561069 AAAAGACGTTCATCCTGCTTTATATAT 57.439 29.630 0.00 0.00 0.00 0.86
2934 3037 9.998106 ACGTTCATCCTGCTTTATATATAAAGT 57.002 29.630 31.63 17.78 46.78 2.66
2943 3046 9.994432 CTGCTTTATATATAAAGTAATGCAGGC 57.006 33.333 31.63 21.32 46.78 4.85
2944 3047 9.513906 TGCTTTATATATAAAGTAATGCAGGCA 57.486 29.630 31.63 22.93 46.78 4.75
2950 3053 7.880160 ATATAAAGTAATGCAGGCAAACAGA 57.120 32.000 0.00 0.00 0.00 3.41
2951 3054 6.780457 ATAAAGTAATGCAGGCAAACAGAT 57.220 33.333 0.00 0.00 0.00 2.90
2952 3055 7.880160 ATAAAGTAATGCAGGCAAACAGATA 57.120 32.000 0.00 0.00 0.00 1.98
2953 3056 5.567138 AAGTAATGCAGGCAAACAGATAC 57.433 39.130 0.00 0.00 0.00 2.24
2954 3057 4.588899 AGTAATGCAGGCAAACAGATACA 58.411 39.130 0.00 0.00 0.00 2.29
2955 3058 5.195940 AGTAATGCAGGCAAACAGATACAT 58.804 37.500 0.00 0.00 0.00 2.29
2956 3059 6.356556 AGTAATGCAGGCAAACAGATACATA 58.643 36.000 0.00 0.00 0.00 2.29
2957 3060 6.828273 AGTAATGCAGGCAAACAGATACATAA 59.172 34.615 0.00 0.00 0.00 1.90
2958 3061 6.720112 AATGCAGGCAAACAGATACATAAT 57.280 33.333 0.00 0.00 0.00 1.28
2959 3062 5.503662 TGCAGGCAAACAGATACATAATG 57.496 39.130 0.00 0.00 0.00 1.90
2960 3063 5.192176 TGCAGGCAAACAGATACATAATGA 58.808 37.500 0.00 0.00 0.00 2.57
2961 3064 5.829391 TGCAGGCAAACAGATACATAATGAT 59.171 36.000 0.00 0.00 0.00 2.45
2962 3065 6.147581 GCAGGCAAACAGATACATAATGATG 58.852 40.000 0.00 0.00 39.16 3.07
2963 3066 6.016860 GCAGGCAAACAGATACATAATGATGA 60.017 38.462 0.00 0.00 36.48 2.92
2964 3067 7.582352 CAGGCAAACAGATACATAATGATGAG 58.418 38.462 0.00 0.00 36.48 2.90
2965 3068 6.713903 AGGCAAACAGATACATAATGATGAGG 59.286 38.462 0.00 0.00 36.48 3.86
2966 3069 6.712095 GGCAAACAGATACATAATGATGAGGA 59.288 38.462 0.00 0.00 36.48 3.71
2967 3070 7.094890 GGCAAACAGATACATAATGATGAGGAG 60.095 40.741 0.00 0.00 36.48 3.69
2968 3071 7.094890 GCAAACAGATACATAATGATGAGGAGG 60.095 40.741 0.00 0.00 36.48 4.30
2969 3072 6.617782 ACAGATACATAATGATGAGGAGGG 57.382 41.667 0.00 0.00 36.48 4.30
2970 3073 5.046014 ACAGATACATAATGATGAGGAGGGC 60.046 44.000 0.00 0.00 36.48 5.19
2971 3074 4.472833 AGATACATAATGATGAGGAGGGCC 59.527 45.833 0.00 0.00 36.48 5.80
2983 3086 2.776665 AGGAGGGCCTTTTATAGAGCA 58.223 47.619 7.89 0.00 43.90 4.26
2984 3087 2.708325 AGGAGGGCCTTTTATAGAGCAG 59.292 50.000 7.89 0.00 43.90 4.24
2985 3088 2.706190 GGAGGGCCTTTTATAGAGCAGA 59.294 50.000 7.89 0.00 0.00 4.26
2986 3089 3.329225 GGAGGGCCTTTTATAGAGCAGAT 59.671 47.826 7.89 0.00 0.00 2.90
2987 3090 4.322567 GAGGGCCTTTTATAGAGCAGATG 58.677 47.826 7.89 0.00 0.00 2.90
2988 3091 3.976654 AGGGCCTTTTATAGAGCAGATGA 59.023 43.478 0.00 0.00 0.00 2.92
2989 3092 4.413520 AGGGCCTTTTATAGAGCAGATGAA 59.586 41.667 0.00 0.00 0.00 2.57
2990 3093 5.103940 AGGGCCTTTTATAGAGCAGATGAAA 60.104 40.000 0.00 0.00 0.00 2.69
2991 3094 5.240403 GGGCCTTTTATAGAGCAGATGAAAG 59.760 44.000 0.84 0.00 32.47 2.62
2992 3095 5.240403 GGCCTTTTATAGAGCAGATGAAAGG 59.760 44.000 17.45 17.45 45.87 3.11
2993 3096 5.825151 GCCTTTTATAGAGCAGATGAAAGGT 59.175 40.000 20.31 0.00 45.32 3.50
2994 3097 6.992715 GCCTTTTATAGAGCAGATGAAAGGTA 59.007 38.462 20.31 0.00 45.32 3.08
2995 3098 7.499232 GCCTTTTATAGAGCAGATGAAAGGTAA 59.501 37.037 20.31 0.00 45.32 2.85
2996 3099 9.396022 CCTTTTATAGAGCAGATGAAAGGTAAA 57.604 33.333 15.18 0.00 41.64 2.01
2999 3102 9.733556 TTTATAGAGCAGATGAAAGGTAAAACA 57.266 29.630 0.00 0.00 0.00 2.83
3000 3103 9.905713 TTATAGAGCAGATGAAAGGTAAAACAT 57.094 29.630 0.00 0.00 0.00 2.71
3002 3105 9.905713 ATAGAGCAGATGAAAGGTAAAACATAA 57.094 29.630 0.00 0.00 0.00 1.90
3003 3106 8.635765 AGAGCAGATGAAAGGTAAAACATAAA 57.364 30.769 0.00 0.00 0.00 1.40
3004 3107 9.077885 AGAGCAGATGAAAGGTAAAACATAAAA 57.922 29.630 0.00 0.00 0.00 1.52
3005 3108 9.691362 GAGCAGATGAAAGGTAAAACATAAAAA 57.309 29.630 0.00 0.00 0.00 1.94
3030 3133 4.553330 GAGAATCCTCACCTACCACAAA 57.447 45.455 0.00 0.00 39.24 2.83
3031 3134 4.906618 GAGAATCCTCACCTACCACAAAA 58.093 43.478 0.00 0.00 39.24 2.44
3032 3135 4.911390 AGAATCCTCACCTACCACAAAAG 58.089 43.478 0.00 0.00 0.00 2.27
3033 3136 2.561478 TCCTCACCTACCACAAAAGC 57.439 50.000 0.00 0.00 0.00 3.51
3034 3137 1.771854 TCCTCACCTACCACAAAAGCA 59.228 47.619 0.00 0.00 0.00 3.91
3035 3138 2.173782 TCCTCACCTACCACAAAAGCAA 59.826 45.455 0.00 0.00 0.00 3.91
3036 3139 2.293399 CCTCACCTACCACAAAAGCAAC 59.707 50.000 0.00 0.00 0.00 4.17
3037 3140 2.293399 CTCACCTACCACAAAAGCAACC 59.707 50.000 0.00 0.00 0.00 3.77
3038 3141 2.092103 TCACCTACCACAAAAGCAACCT 60.092 45.455 0.00 0.00 0.00 3.50
3039 3142 3.136809 TCACCTACCACAAAAGCAACCTA 59.863 43.478 0.00 0.00 0.00 3.08
3040 3143 3.502211 CACCTACCACAAAAGCAACCTAG 59.498 47.826 0.00 0.00 0.00 3.02
3041 3144 3.081804 CCTACCACAAAAGCAACCTAGG 58.918 50.000 7.41 7.41 0.00 3.02
3042 3145 2.748209 ACCACAAAAGCAACCTAGGT 57.252 45.000 9.21 9.21 0.00 3.08
3043 3146 3.026707 ACCACAAAAGCAACCTAGGTT 57.973 42.857 21.96 21.96 39.13 3.50
3044 3147 4.173290 ACCACAAAAGCAACCTAGGTTA 57.827 40.909 26.66 0.00 36.46 2.85
3045 3148 3.887110 ACCACAAAAGCAACCTAGGTTAC 59.113 43.478 26.66 21.21 36.46 2.50
3046 3149 3.254903 CCACAAAAGCAACCTAGGTTACC 59.745 47.826 26.66 19.36 36.46 2.85
3047 3150 3.058501 CACAAAAGCAACCTAGGTTACCG 60.059 47.826 26.66 15.67 36.46 4.02
3048 3151 3.181452 ACAAAAGCAACCTAGGTTACCGA 60.181 43.478 26.66 0.00 36.46 4.69
3049 3152 3.329929 AAAGCAACCTAGGTTACCGAG 57.670 47.619 26.66 14.94 36.46 4.63
3050 3153 1.934410 AGCAACCTAGGTTACCGAGT 58.066 50.000 26.66 2.63 36.46 4.18
3051 3154 3.091633 AGCAACCTAGGTTACCGAGTA 57.908 47.619 26.66 0.00 36.46 2.59
3052 3155 3.434309 AGCAACCTAGGTTACCGAGTAA 58.566 45.455 26.66 0.00 36.46 2.24
3053 3156 3.446516 AGCAACCTAGGTTACCGAGTAAG 59.553 47.826 26.66 12.09 36.46 2.34
3054 3157 3.445096 GCAACCTAGGTTACCGAGTAAGA 59.555 47.826 26.66 0.00 36.46 2.10
3055 3158 4.082026 GCAACCTAGGTTACCGAGTAAGAA 60.082 45.833 26.66 0.00 36.46 2.52
3056 3159 5.648572 CAACCTAGGTTACCGAGTAAGAAG 58.351 45.833 26.66 6.13 36.46 2.85
3057 3160 4.276642 ACCTAGGTTACCGAGTAAGAAGG 58.723 47.826 9.21 4.67 32.89 3.46
3058 3161 4.018050 ACCTAGGTTACCGAGTAAGAAGGA 60.018 45.833 9.21 0.00 31.95 3.36
3059 3162 4.952335 CCTAGGTTACCGAGTAAGAAGGAA 59.048 45.833 10.48 0.00 30.43 3.36
3060 3163 4.797800 AGGTTACCGAGTAAGAAGGAAC 57.202 45.455 0.00 0.00 0.00 3.62
3061 3164 4.154942 AGGTTACCGAGTAAGAAGGAACA 58.845 43.478 0.00 0.00 0.00 3.18
3062 3165 4.590222 AGGTTACCGAGTAAGAAGGAACAA 59.410 41.667 0.00 0.00 0.00 2.83
3063 3166 4.687948 GGTTACCGAGTAAGAAGGAACAAC 59.312 45.833 0.00 0.00 0.00 3.32
3064 3167 5.510349 GGTTACCGAGTAAGAAGGAACAACT 60.510 44.000 0.00 0.00 0.00 3.16
3065 3168 4.254402 ACCGAGTAAGAAGGAACAACTC 57.746 45.455 0.00 0.00 34.55 3.01
3068 3171 2.994578 GAGTAAGAAGGAACAACTCGCC 59.005 50.000 0.00 0.00 0.00 5.54
3069 3172 2.633481 AGTAAGAAGGAACAACTCGCCT 59.367 45.455 0.00 0.00 0.00 5.52
3070 3173 2.171341 AAGAAGGAACAACTCGCCTC 57.829 50.000 0.00 0.00 0.00 4.70
3071 3174 0.321996 AGAAGGAACAACTCGCCTCC 59.678 55.000 0.00 0.00 0.00 4.30
3072 3175 0.034896 GAAGGAACAACTCGCCTCCA 59.965 55.000 0.00 0.00 0.00 3.86
3073 3176 0.472471 AAGGAACAACTCGCCTCCAA 59.528 50.000 0.00 0.00 0.00 3.53
3074 3177 0.035458 AGGAACAACTCGCCTCCAAG 59.965 55.000 0.00 0.00 0.00 3.61
3075 3178 0.955919 GGAACAACTCGCCTCCAAGG 60.956 60.000 0.00 0.00 38.80 3.61
3076 3179 0.034896 GAACAACTCGCCTCCAAGGA 59.965 55.000 0.00 0.00 37.67 3.36
3077 3180 0.472471 AACAACTCGCCTCCAAGGAA 59.528 50.000 0.00 0.00 37.67 3.36
3078 3181 0.472471 ACAACTCGCCTCCAAGGAAA 59.528 50.000 0.00 0.00 37.67 3.13
3079 3182 1.133915 ACAACTCGCCTCCAAGGAAAA 60.134 47.619 0.00 0.00 37.67 2.29
3080 3183 2.162681 CAACTCGCCTCCAAGGAAAAT 58.837 47.619 0.00 0.00 37.67 1.82
3081 3184 2.115343 ACTCGCCTCCAAGGAAAATC 57.885 50.000 0.00 0.00 37.67 2.17
3082 3185 1.009829 CTCGCCTCCAAGGAAAATCG 58.990 55.000 0.00 0.00 37.67 3.34
3083 3186 1.024579 TCGCCTCCAAGGAAAATCGC 61.025 55.000 0.00 0.00 37.67 4.58
3084 3187 1.809869 GCCTCCAAGGAAAATCGCC 59.190 57.895 0.00 0.00 37.67 5.54
3085 3188 1.667154 GCCTCCAAGGAAAATCGCCC 61.667 60.000 0.00 0.00 37.67 6.13
3086 3189 1.376609 CCTCCAAGGAAAATCGCCCG 61.377 60.000 0.00 0.00 37.67 6.13
3087 3190 1.376609 CTCCAAGGAAAATCGCCCGG 61.377 60.000 0.00 0.00 0.00 5.73
3088 3191 2.489751 CAAGGAAAATCGCCCGGC 59.510 61.111 0.00 0.00 0.00 6.13
3089 3192 2.754254 AAGGAAAATCGCCCGGCC 60.754 61.111 3.10 0.00 0.00 6.13
3090 3193 3.282374 AAGGAAAATCGCCCGGCCT 62.282 57.895 3.10 0.00 0.00 5.19
3091 3194 3.209812 GGAAAATCGCCCGGCCTC 61.210 66.667 3.10 0.00 0.00 4.70
3092 3195 3.573491 GAAAATCGCCCGGCCTCG 61.573 66.667 3.10 1.35 0.00 4.63
3093 3196 4.404098 AAAATCGCCCGGCCTCGT 62.404 61.111 3.10 0.00 33.95 4.18
3094 3197 3.912745 AAAATCGCCCGGCCTCGTT 62.913 57.895 3.10 0.00 33.95 3.85
3114 3217 4.980903 GCCGCGCACACCAAGTTG 62.981 66.667 8.75 0.00 0.00 3.16
3115 3218 3.582120 CCGCGCACACCAAGTTGT 61.582 61.111 8.75 0.00 0.00 3.32
3116 3219 2.407210 CGCGCACACCAAGTTGTT 59.593 55.556 8.75 0.00 0.00 2.83
3117 3220 1.644372 CGCGCACACCAAGTTGTTA 59.356 52.632 8.75 0.00 0.00 2.41
3118 3221 0.237235 CGCGCACACCAAGTTGTTAT 59.763 50.000 8.75 0.00 0.00 1.89
3119 3222 1.724654 CGCGCACACCAAGTTGTTATC 60.725 52.381 8.75 0.00 0.00 1.75
3120 3223 1.724654 GCGCACACCAAGTTGTTATCG 60.725 52.381 0.30 0.40 0.00 2.92
3121 3224 1.136085 CGCACACCAAGTTGTTATCGG 60.136 52.381 1.45 0.00 0.00 4.18
3122 3225 2.147958 GCACACCAAGTTGTTATCGGA 58.852 47.619 1.45 0.00 0.00 4.55
3123 3226 2.159627 GCACACCAAGTTGTTATCGGAG 59.840 50.000 1.45 0.00 0.00 4.63
3124 3227 3.659786 CACACCAAGTTGTTATCGGAGA 58.340 45.455 1.45 0.00 45.75 3.71
3125 3228 3.679980 CACACCAAGTTGTTATCGGAGAG 59.320 47.826 1.45 0.00 43.63 3.20
3126 3229 3.262420 CACCAAGTTGTTATCGGAGAGG 58.738 50.000 1.45 0.00 43.63 3.69
3127 3230 3.056107 CACCAAGTTGTTATCGGAGAGGA 60.056 47.826 1.45 0.00 43.63 3.71
3128 3231 3.581332 ACCAAGTTGTTATCGGAGAGGAA 59.419 43.478 1.45 0.00 43.63 3.36
3129 3232 4.225267 ACCAAGTTGTTATCGGAGAGGAAT 59.775 41.667 1.45 0.00 43.63 3.01
3130 3233 5.186198 CCAAGTTGTTATCGGAGAGGAATT 58.814 41.667 1.45 0.00 43.63 2.17
3131 3234 6.070424 ACCAAGTTGTTATCGGAGAGGAATTA 60.070 38.462 1.45 0.00 43.63 1.40
3132 3235 6.992715 CCAAGTTGTTATCGGAGAGGAATTAT 59.007 38.462 1.45 0.00 43.63 1.28
3133 3236 7.499232 CCAAGTTGTTATCGGAGAGGAATTATT 59.501 37.037 1.45 0.00 43.63 1.40
3134 3237 8.893727 CAAGTTGTTATCGGAGAGGAATTATTT 58.106 33.333 0.00 0.00 43.63 1.40
3135 3238 9.462606 AAGTTGTTATCGGAGAGGAATTATTTT 57.537 29.630 0.00 0.00 43.63 1.82
3136 3239 9.462606 AGTTGTTATCGGAGAGGAATTATTTTT 57.537 29.630 0.00 0.00 43.63 1.94
3137 3240 9.717892 GTTGTTATCGGAGAGGAATTATTTTTC 57.282 33.333 0.00 0.00 43.63 2.29
3138 3241 8.446599 TGTTATCGGAGAGGAATTATTTTTCC 57.553 34.615 0.00 0.00 43.63 3.13
3139 3242 7.501225 TGTTATCGGAGAGGAATTATTTTTCCC 59.499 37.037 0.00 0.00 45.32 3.97
3140 3243 5.710409 TCGGAGAGGAATTATTTTTCCCT 57.290 39.130 0.00 0.00 45.32 4.20
3141 3244 6.818281 TCGGAGAGGAATTATTTTTCCCTA 57.182 37.500 0.00 0.00 45.32 3.53
3142 3245 6.827727 TCGGAGAGGAATTATTTTTCCCTAG 58.172 40.000 0.00 0.00 45.32 3.02
3143 3246 6.614087 TCGGAGAGGAATTATTTTTCCCTAGA 59.386 38.462 0.00 0.00 45.32 2.43
3144 3247 6.706716 CGGAGAGGAATTATTTTTCCCTAGAC 59.293 42.308 0.00 0.00 45.32 2.59
3145 3248 6.706716 GGAGAGGAATTATTTTTCCCTAGACG 59.293 42.308 0.00 0.00 45.32 4.18
3146 3249 7.196637 AGAGGAATTATTTTTCCCTAGACGT 57.803 36.000 0.00 0.00 45.32 4.34
3147 3250 7.273712 AGAGGAATTATTTTTCCCTAGACGTC 58.726 38.462 7.70 7.70 45.32 4.34
3148 3251 7.125963 AGAGGAATTATTTTTCCCTAGACGTCT 59.874 37.037 23.66 23.66 45.32 4.18
3149 3252 7.273712 AGGAATTATTTTTCCCTAGACGTCTC 58.726 38.462 23.89 1.29 45.32 3.36
3150 3253 7.046033 GGAATTATTTTTCCCTAGACGTCTCA 58.954 38.462 23.89 7.91 39.46 3.27
3151 3254 7.551617 GGAATTATTTTTCCCTAGACGTCTCAA 59.448 37.037 23.89 4.31 39.46 3.02
3152 3255 8.857694 AATTATTTTTCCCTAGACGTCTCAAA 57.142 30.769 23.89 13.68 0.00 2.69
3153 3256 9.462606 AATTATTTTTCCCTAGACGTCTCAAAT 57.537 29.630 23.89 17.66 0.00 2.32
3154 3257 8.857694 TTATTTTTCCCTAGACGTCTCAAATT 57.142 30.769 23.89 12.26 0.00 1.82
3155 3258 6.796705 TTTTTCCCTAGACGTCTCAAATTC 57.203 37.500 23.89 0.00 0.00 2.17
3156 3259 5.740290 TTTCCCTAGACGTCTCAAATTCT 57.260 39.130 23.89 0.00 0.00 2.40
3157 3260 6.845758 TTTCCCTAGACGTCTCAAATTCTA 57.154 37.500 23.89 0.03 0.00 2.10
3158 3261 7.419711 TTTCCCTAGACGTCTCAAATTCTAT 57.580 36.000 23.89 0.00 0.00 1.98
3159 3262 8.529424 TTTCCCTAGACGTCTCAAATTCTATA 57.471 34.615 23.89 0.00 0.00 1.31
3160 3263 7.747155 TCCCTAGACGTCTCAAATTCTATAG 57.253 40.000 23.89 9.49 0.00 1.31
3161 3264 6.715718 TCCCTAGACGTCTCAAATTCTATAGG 59.284 42.308 23.89 17.94 0.00 2.57
3162 3265 6.715718 CCCTAGACGTCTCAAATTCTATAGGA 59.284 42.308 23.89 0.00 0.00 2.94
3163 3266 7.230913 CCCTAGACGTCTCAAATTCTATAGGAA 59.769 40.741 23.89 0.00 38.41 3.36
3164 3267 8.630917 CCTAGACGTCTCAAATTCTATAGGAAA 58.369 37.037 23.89 0.00 37.49 3.13
3185 3288 9.479549 AGGAAAATATATGTCATTTGGTTGTCT 57.520 29.630 0.00 0.00 0.00 3.41
3192 3295 5.782893 TGTCATTTGGTTGTCTTTTAGGG 57.217 39.130 0.00 0.00 0.00 3.53
3193 3296 5.450453 TGTCATTTGGTTGTCTTTTAGGGA 58.550 37.500 0.00 0.00 0.00 4.20
3194 3297 5.300792 TGTCATTTGGTTGTCTTTTAGGGAC 59.699 40.000 0.00 0.00 0.00 4.46
3195 3298 5.300792 GTCATTTGGTTGTCTTTTAGGGACA 59.699 40.000 0.00 0.00 41.23 4.02
3196 3299 6.015434 GTCATTTGGTTGTCTTTTAGGGACAT 60.015 38.462 0.00 0.00 42.26 3.06
3197 3300 6.553100 TCATTTGGTTGTCTTTTAGGGACATT 59.447 34.615 0.00 0.00 42.26 2.71
3198 3301 6.800072 TTTGGTTGTCTTTTAGGGACATTT 57.200 33.333 0.00 0.00 42.26 2.32
3199 3302 5.782893 TGGTTGTCTTTTAGGGACATTTG 57.217 39.130 0.00 0.00 42.26 2.32
3200 3303 5.450453 TGGTTGTCTTTTAGGGACATTTGA 58.550 37.500 0.00 0.00 42.26 2.69
3201 3304 6.074648 TGGTTGTCTTTTAGGGACATTTGAT 58.925 36.000 0.00 0.00 42.26 2.57
3202 3305 7.235079 TGGTTGTCTTTTAGGGACATTTGATA 58.765 34.615 0.00 0.00 42.26 2.15
3203 3306 7.726291 TGGTTGTCTTTTAGGGACATTTGATAA 59.274 33.333 0.00 0.00 42.26 1.75
3204 3307 8.581578 GGTTGTCTTTTAGGGACATTTGATAAA 58.418 33.333 0.00 0.00 42.26 1.40
3208 3311 9.586435 GTCTTTTAGGGACATTTGATAAATTGG 57.414 33.333 0.00 0.00 34.23 3.16
3209 3312 9.540538 TCTTTTAGGGACATTTGATAAATTGGA 57.459 29.630 0.00 0.00 0.00 3.53
3211 3314 9.936759 TTTTAGGGACATTTGATAAATTGGAAC 57.063 29.630 0.00 0.00 0.00 3.62
3212 3315 8.657387 TTAGGGACATTTGATAAATTGGAACA 57.343 30.769 0.00 0.00 0.00 3.18
3213 3316 7.174107 AGGGACATTTGATAAATTGGAACAG 57.826 36.000 0.00 0.00 42.39 3.16
3214 3317 6.725834 AGGGACATTTGATAAATTGGAACAGT 59.274 34.615 0.00 0.00 42.39 3.55
3215 3318 7.893302 AGGGACATTTGATAAATTGGAACAGTA 59.107 33.333 0.00 0.00 42.39 2.74
3216 3319 8.527810 GGGACATTTGATAAATTGGAACAGTAA 58.472 33.333 0.00 0.00 42.39 2.24
3217 3320 9.573133 GGACATTTGATAAATTGGAACAGTAAG 57.427 33.333 0.00 0.00 42.39 2.34
3218 3321 9.573133 GACATTTGATAAATTGGAACAGTAAGG 57.427 33.333 0.00 0.00 42.39 2.69
3219 3322 8.531146 ACATTTGATAAATTGGAACAGTAAGGG 58.469 33.333 0.00 0.00 42.39 3.95
3220 3323 6.524101 TTGATAAATTGGAACAGTAAGGGC 57.476 37.500 0.00 0.00 42.39 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 0.588252 GAAACGGATGCATGATCGGG 59.412 55.000 2.46 0.00 36.04 5.14
54 55 2.676016 TTCTTGTTGGCAAAGCGGCG 62.676 55.000 0.00 0.51 45.16 6.46
128 129 7.110155 TGATTATGATGATGATGATGGTCCTG 58.890 38.462 0.00 0.00 0.00 3.86
209 210 1.066502 TGGTGATGTGATGTGGTACGG 60.067 52.381 0.00 0.00 0.00 4.02
214 215 1.647545 GGCGTGGTGATGTGATGTGG 61.648 60.000 0.00 0.00 0.00 4.17
260 261 1.304052 TGGAAGATTTGGTGGCCGG 60.304 57.895 0.00 0.00 0.00 6.13
299 300 4.742201 CTCACTCGGCGGTGGTGG 62.742 72.222 22.21 12.54 37.75 4.61
300 301 2.890847 GATCTCACTCGGCGGTGGTG 62.891 65.000 22.21 19.77 37.75 4.17
301 302 2.680352 ATCTCACTCGGCGGTGGT 60.680 61.111 22.21 10.87 37.75 4.16
405 406 9.719279 CCAAACGTAGAAAGTAAACAATTACAA 57.281 29.630 0.00 0.00 43.20 2.41
406 407 9.107177 TCCAAACGTAGAAAGTAAACAATTACA 57.893 29.630 0.00 0.00 43.20 2.41
407 408 9.934190 TTCCAAACGTAGAAAGTAAACAATTAC 57.066 29.630 0.00 0.00 41.45 1.89
411 412 9.934190 GTAATTCCAAACGTAGAAAGTAAACAA 57.066 29.630 0.00 0.00 0.00 2.83
417 418 7.496591 TGACAAGTAATTCCAAACGTAGAAAGT 59.503 33.333 0.00 0.00 0.00 2.66
421 422 7.632721 GTTTGACAAGTAATTCCAAACGTAGA 58.367 34.615 11.93 0.00 37.77 2.59
422 423 7.831750 GTTTGACAAGTAATTCCAAACGTAG 57.168 36.000 11.93 0.00 37.77 3.51
427 428 5.591067 ACTCCGTTTGACAAGTAATTCCAAA 59.409 36.000 0.00 0.00 0.00 3.28
431 432 7.417496 AACTACTCCGTTTGACAAGTAATTC 57.583 36.000 0.00 0.00 0.00 2.17
461 462 2.222027 AGCACTAAGAGTTTGCCACAC 58.778 47.619 0.00 0.00 36.91 3.82
463 464 6.927294 ATTATAGCACTAAGAGTTTGCCAC 57.073 37.500 0.00 0.00 36.91 5.01
464 465 7.938140 AAATTATAGCACTAAGAGTTTGCCA 57.062 32.000 0.00 0.00 36.91 4.92
465 466 9.110502 ACTAAATTATAGCACTAAGAGTTTGCC 57.889 33.333 0.00 0.00 36.91 4.52
470 471 9.819267 GACCAACTAAATTATAGCACTAAGAGT 57.181 33.333 0.00 0.00 0.00 3.24
471 472 9.817809 TGACCAACTAAATTATAGCACTAAGAG 57.182 33.333 0.00 0.00 0.00 2.85
473 474 9.817809 TCTGACCAACTAAATTATAGCACTAAG 57.182 33.333 0.00 0.00 0.00 2.18
476 477 9.686683 AAATCTGACCAACTAAATTATAGCACT 57.313 29.630 0.00 0.00 0.00 4.40
477 478 9.722056 CAAATCTGACCAACTAAATTATAGCAC 57.278 33.333 0.00 0.00 0.00 4.40
478 479 9.679661 TCAAATCTGACCAACTAAATTATAGCA 57.320 29.630 0.00 0.00 0.00 3.49
499 501 8.874744 TGAAGAAGAATCTGAAAGGATCAAAT 57.125 30.769 0.00 0.00 37.67 2.32
563 583 2.926165 GTGCTGCACACTGAGAATTTC 58.074 47.619 26.70 0.00 46.41 2.17
582 602 5.404466 TGCAATAGCTAGCCAAAATTTGT 57.596 34.783 12.13 0.00 42.74 2.83
605 625 3.826637 GCAAAAGGCATGCAGTGAT 57.173 47.368 21.36 0.00 43.29 3.06
615 635 2.029518 GTGGCAGGTGCAAAAGGC 59.970 61.111 4.01 0.00 44.36 4.35
616 636 2.132996 TGGTGGCAGGTGCAAAAGG 61.133 57.895 4.01 0.00 44.36 3.11
617 637 1.067916 GTGGTGGCAGGTGCAAAAG 59.932 57.895 4.01 0.00 44.36 2.27
618 638 1.683707 TGTGGTGGCAGGTGCAAAA 60.684 52.632 4.01 0.00 44.36 2.44
619 639 2.043551 TGTGGTGGCAGGTGCAAA 60.044 55.556 4.01 0.00 44.36 3.68
620 640 2.832661 GTGTGGTGGCAGGTGCAA 60.833 61.111 4.01 0.00 44.36 4.08
621 641 3.807839 AGTGTGGTGGCAGGTGCA 61.808 61.111 4.01 0.00 44.36 4.57
622 642 3.289834 CAGTGTGGTGGCAGGTGC 61.290 66.667 0.00 0.00 41.14 5.01
628 648 1.679032 GGGTAAGATCAGTGTGGTGGC 60.679 57.143 0.00 0.00 0.00 5.01
632 655 2.169352 CTCCTGGGTAAGATCAGTGTGG 59.831 54.545 0.00 0.00 0.00 4.17
644 667 1.422977 TTGCACTTGCCTCCTGGGTA 61.423 55.000 0.00 0.00 41.18 3.69
646 669 1.975407 CTTGCACTTGCCTCCTGGG 60.975 63.158 0.00 0.00 41.18 4.45
664 689 3.712287 CCAACTTTGGCCCCATCC 58.288 61.111 0.00 0.00 42.21 3.51
763 788 4.136678 GTGTATTTCGTTTCGTTTCGGAC 58.863 43.478 0.00 0.00 0.00 4.79
789 814 2.193536 GTGCTGCTCCCGTTTGGTT 61.194 57.895 0.00 0.00 34.77 3.67
791 816 2.594303 TGTGCTGCTCCCGTTTGG 60.594 61.111 0.00 0.00 0.00 3.28
849 875 0.315886 GGGTTTTAGTGGGGCGTTTG 59.684 55.000 0.00 0.00 0.00 2.93
1020 1067 0.534873 GCACCACCAACAAACCAACT 59.465 50.000 0.00 0.00 0.00 3.16
1206 1253 1.298713 CGACGGCGAGATGAAGGAG 60.299 63.158 16.62 0.00 40.82 3.69
1593 1640 1.153823 CGTGGTGAGGATGTCGACC 60.154 63.158 14.12 0.00 0.00 4.79
1845 1892 1.375523 CAGCTTGTACGTCACCCCC 60.376 63.158 0.00 0.00 0.00 5.40
2342 2440 1.753078 GCCGGGGAAGGAATTCACC 60.753 63.158 2.18 7.33 41.12 4.02
2370 2468 3.427528 ACAAATAGTACAACGAGCACACG 59.572 43.478 0.00 0.00 39.31 4.49
2428 2531 9.841295 GGAGGGAGTACTATCATATAGAACTAG 57.159 40.741 0.00 0.00 0.00 2.57
2439 2542 2.512896 ACGAAGGGAGGGAGTACTATCA 59.487 50.000 0.00 0.00 0.00 2.15
2448 2551 6.013119 AGAGTAAATAAAAACGAAGGGAGGGA 60.013 38.462 0.00 0.00 0.00 4.20
2449 2552 6.093633 CAGAGTAAATAAAAACGAAGGGAGGG 59.906 42.308 0.00 0.00 0.00 4.30
2450 2553 6.403309 GCAGAGTAAATAAAAACGAAGGGAGG 60.403 42.308 0.00 0.00 0.00 4.30
2451 2554 6.148811 TGCAGAGTAAATAAAAACGAAGGGAG 59.851 38.462 0.00 0.00 0.00 4.30
2452 2555 5.998981 TGCAGAGTAAATAAAAACGAAGGGA 59.001 36.000 0.00 0.00 0.00 4.20
2453 2556 6.249035 TGCAGAGTAAATAAAAACGAAGGG 57.751 37.500 0.00 0.00 0.00 3.95
2469 2572 9.236006 ACTTTGATCAAAACTAATATGCAGAGT 57.764 29.630 20.82 7.90 0.00 3.24
2470 2573 9.713740 GACTTTGATCAAAACTAATATGCAGAG 57.286 33.333 20.82 7.30 0.00 3.35
2471 2574 9.230122 TGACTTTGATCAAAACTAATATGCAGA 57.770 29.630 20.82 0.00 0.00 4.26
2472 2575 9.844790 TTGACTTTGATCAAAACTAATATGCAG 57.155 29.630 20.82 7.89 35.65 4.41
2473 2576 9.844790 CTTGACTTTGATCAAAACTAATATGCA 57.155 29.630 20.82 7.34 38.12 3.96
2474 2577 8.801913 GCTTGACTTTGATCAAAACTAATATGC 58.198 33.333 20.82 13.38 38.12 3.14
2492 2595 7.801716 TGTCAAAGTATACAAAGCTTGACTT 57.198 32.000 21.82 2.58 41.70 3.01
2493 2596 7.801716 TTGTCAAAGTATACAAAGCTTGACT 57.198 32.000 21.82 0.00 32.86 3.41
2632 2735 9.328845 ACTTCGTAAAGTTTGACCAAGTTTATA 57.671 29.630 0.00 0.00 43.28 0.98
2633 2736 8.217131 ACTTCGTAAAGTTTGACCAAGTTTAT 57.783 30.769 0.00 0.00 43.28 1.40
2634 2737 7.614124 ACTTCGTAAAGTTTGACCAAGTTTA 57.386 32.000 0.00 0.00 43.28 2.01
2635 2738 6.505044 ACTTCGTAAAGTTTGACCAAGTTT 57.495 33.333 0.00 0.00 43.28 2.66
2661 2764 5.460419 CCGCATATTAGAGTTGACTGAAGTC 59.540 44.000 3.41 3.41 44.97 3.01
2662 2765 5.127194 TCCGCATATTAGAGTTGACTGAAGT 59.873 40.000 0.00 0.00 0.00 3.01
2663 2766 5.592054 TCCGCATATTAGAGTTGACTGAAG 58.408 41.667 0.00 0.00 0.00 3.02
2664 2767 5.127194 ACTCCGCATATTAGAGTTGACTGAA 59.873 40.000 0.00 0.00 37.60 3.02
2665 2768 4.645136 ACTCCGCATATTAGAGTTGACTGA 59.355 41.667 0.00 0.00 37.60 3.41
2666 2769 4.938080 ACTCCGCATATTAGAGTTGACTG 58.062 43.478 0.00 0.00 37.60 3.51
2667 2770 6.710597 TTACTCCGCATATTAGAGTTGACT 57.289 37.500 4.78 0.00 41.09 3.41
2668 2771 7.948278 ATTTACTCCGCATATTAGAGTTGAC 57.052 36.000 4.78 0.00 41.09 3.18
2673 2776 9.793245 CGTTTTTATTTACTCCGCATATTAGAG 57.207 33.333 0.00 0.00 0.00 2.43
2674 2777 8.767085 CCGTTTTTATTTACTCCGCATATTAGA 58.233 33.333 0.00 0.00 0.00 2.10
2675 2778 8.767085 TCCGTTTTTATTTACTCCGCATATTAG 58.233 33.333 0.00 0.00 0.00 1.73
2676 2779 8.659925 TCCGTTTTTATTTACTCCGCATATTA 57.340 30.769 0.00 0.00 0.00 0.98
2677 2780 7.255001 CCTCCGTTTTTATTTACTCCGCATATT 60.255 37.037 0.00 0.00 0.00 1.28
2678 2781 6.204108 CCTCCGTTTTTATTTACTCCGCATAT 59.796 38.462 0.00 0.00 0.00 1.78
2679 2782 5.524646 CCTCCGTTTTTATTTACTCCGCATA 59.475 40.000 0.00 0.00 0.00 3.14
2680 2783 4.334481 CCTCCGTTTTTATTTACTCCGCAT 59.666 41.667 0.00 0.00 0.00 4.73
2681 2784 3.685756 CCTCCGTTTTTATTTACTCCGCA 59.314 43.478 0.00 0.00 0.00 5.69
2682 2785 3.064408 CCCTCCGTTTTTATTTACTCCGC 59.936 47.826 0.00 0.00 0.00 5.54
2683 2786 4.506758 TCCCTCCGTTTTTATTTACTCCG 58.493 43.478 0.00 0.00 0.00 4.63
2684 2787 5.494724 ACTCCCTCCGTTTTTATTTACTCC 58.505 41.667 0.00 0.00 0.00 3.85
2685 2788 9.993454 ATATACTCCCTCCGTTTTTATTTACTC 57.007 33.333 0.00 0.00 0.00 2.59
2696 2799 9.543231 TGAATTTATCTATATACTCCCTCCGTT 57.457 33.333 0.00 0.00 0.00 4.44
2697 2800 9.716556 ATGAATTTATCTATATACTCCCTCCGT 57.283 33.333 0.00 0.00 0.00 4.69
2698 2801 9.973450 CATGAATTTATCTATATACTCCCTCCG 57.027 37.037 0.00 0.00 0.00 4.63
2712 2815 9.013229 TGAAACAGCTTGTACATGAATTTATCT 57.987 29.630 12.65 0.00 0.00 1.98
2713 2816 9.065871 GTGAAACAGCTTGTACATGAATTTATC 57.934 33.333 12.65 4.13 36.32 1.75
2714 2817 8.028938 GGTGAAACAGCTTGTACATGAATTTAT 58.971 33.333 12.65 0.00 39.98 1.40
2715 2818 7.230510 AGGTGAAACAGCTTGTACATGAATTTA 59.769 33.333 12.65 0.00 39.27 1.40
2716 2819 6.040842 AGGTGAAACAGCTTGTACATGAATTT 59.959 34.615 12.65 8.48 39.27 1.82
2717 2820 5.536161 AGGTGAAACAGCTTGTACATGAATT 59.464 36.000 12.65 2.49 39.27 2.17
2718 2821 5.072741 AGGTGAAACAGCTTGTACATGAAT 58.927 37.500 12.65 0.00 39.27 2.57
2719 2822 4.460263 AGGTGAAACAGCTTGTACATGAA 58.540 39.130 12.65 0.00 39.27 2.57
2720 2823 4.085357 AGGTGAAACAGCTTGTACATGA 57.915 40.909 12.65 0.00 39.27 3.07
2729 2832 4.706962 AGAAACTGAAAAGGTGAAACAGCT 59.293 37.500 0.00 0.00 44.48 4.24
2730 2833 4.998788 AGAAACTGAAAAGGTGAAACAGC 58.001 39.130 0.00 0.00 39.98 4.40
2731 2834 6.127897 ACTGAGAAACTGAAAAGGTGAAACAG 60.128 38.462 0.00 0.00 39.98 3.16
2732 2835 5.710099 ACTGAGAAACTGAAAAGGTGAAACA 59.290 36.000 0.00 0.00 39.98 2.83
2733 2836 6.196079 ACTGAGAAACTGAAAAGGTGAAAC 57.804 37.500 0.00 0.00 0.00 2.78
2734 2837 7.931578 TTACTGAGAAACTGAAAAGGTGAAA 57.068 32.000 0.00 0.00 0.00 2.69
2735 2838 7.931578 TTTACTGAGAAACTGAAAAGGTGAA 57.068 32.000 0.00 0.00 0.00 3.18
2736 2839 8.519799 AATTTACTGAGAAACTGAAAAGGTGA 57.480 30.769 0.00 0.00 0.00 4.02
2737 2840 9.586435 AAAATTTACTGAGAAACTGAAAAGGTG 57.414 29.630 0.00 0.00 0.00 4.00
2740 2843 9.906111 GCAAAAATTTACTGAGAAACTGAAAAG 57.094 29.630 4.74 0.00 0.00 2.27
2741 2844 9.429359 TGCAAAAATTTACTGAGAAACTGAAAA 57.571 25.926 4.74 0.00 0.00 2.29
2742 2845 8.868916 GTGCAAAAATTTACTGAGAAACTGAAA 58.131 29.630 0.00 0.00 0.00 2.69
2743 2846 7.491048 GGTGCAAAAATTTACTGAGAAACTGAA 59.509 33.333 0.00 0.00 0.00 3.02
2744 2847 6.978080 GGTGCAAAAATTTACTGAGAAACTGA 59.022 34.615 0.00 0.00 0.00 3.41
2745 2848 6.980397 AGGTGCAAAAATTTACTGAGAAACTG 59.020 34.615 0.00 0.00 0.00 3.16
2746 2849 7.112452 AGGTGCAAAAATTTACTGAGAAACT 57.888 32.000 0.00 0.00 0.00 2.66
2747 2850 8.135529 AGTAGGTGCAAAAATTTACTGAGAAAC 58.864 33.333 0.00 0.00 0.00 2.78
2748 2851 8.232913 AGTAGGTGCAAAAATTTACTGAGAAA 57.767 30.769 0.00 0.00 0.00 2.52
2749 2852 7.307751 CGAGTAGGTGCAAAAATTTACTGAGAA 60.308 37.037 0.00 0.00 0.00 2.87
2750 2853 6.147164 CGAGTAGGTGCAAAAATTTACTGAGA 59.853 38.462 0.00 0.00 0.00 3.27
2751 2854 6.147164 TCGAGTAGGTGCAAAAATTTACTGAG 59.853 38.462 0.00 0.00 0.00 3.35
2752 2855 5.992829 TCGAGTAGGTGCAAAAATTTACTGA 59.007 36.000 0.00 0.00 0.00 3.41
2753 2856 6.236017 TCGAGTAGGTGCAAAAATTTACTG 57.764 37.500 0.00 0.00 0.00 2.74
2754 2857 7.390718 AGAATCGAGTAGGTGCAAAAATTTACT 59.609 33.333 0.00 0.00 0.00 2.24
2755 2858 7.527457 AGAATCGAGTAGGTGCAAAAATTTAC 58.473 34.615 0.00 0.00 0.00 2.01
2756 2859 7.681939 AGAATCGAGTAGGTGCAAAAATTTA 57.318 32.000 0.00 0.00 0.00 1.40
2757 2860 6.575162 AGAATCGAGTAGGTGCAAAAATTT 57.425 33.333 0.00 0.00 0.00 1.82
2758 2861 6.183309 GAGAATCGAGTAGGTGCAAAAATT 57.817 37.500 0.00 0.00 0.00 1.82
2759 2862 5.803020 GAGAATCGAGTAGGTGCAAAAAT 57.197 39.130 0.00 0.00 0.00 1.82
2775 2878 3.992427 ACGTGGTTTCTTTACCGAGAATC 59.008 43.478 0.00 0.00 41.28 2.52
2776 2879 3.999046 ACGTGGTTTCTTTACCGAGAAT 58.001 40.909 0.00 0.00 41.28 2.40
2777 2880 3.457610 ACGTGGTTTCTTTACCGAGAA 57.542 42.857 0.00 0.00 41.28 2.87
2778 2881 4.298332 GTTACGTGGTTTCTTTACCGAGA 58.702 43.478 0.00 0.00 41.28 4.04
2779 2882 3.120121 CGTTACGTGGTTTCTTTACCGAG 59.880 47.826 0.00 0.00 41.28 4.63
2780 2883 3.049206 CGTTACGTGGTTTCTTTACCGA 58.951 45.455 0.00 0.00 41.28 4.69
2781 2884 3.049206 TCGTTACGTGGTTTCTTTACCG 58.951 45.455 4.24 0.00 41.28 4.02
2782 2885 5.596268 ATTCGTTACGTGGTTTCTTTACC 57.404 39.130 4.24 0.00 38.73 2.85
2783 2886 6.355144 CACAATTCGTTACGTGGTTTCTTTAC 59.645 38.462 4.24 0.00 0.00 2.01
2784 2887 6.257411 TCACAATTCGTTACGTGGTTTCTTTA 59.743 34.615 4.24 0.00 0.00 1.85
2785 2888 5.064962 TCACAATTCGTTACGTGGTTTCTTT 59.935 36.000 4.24 0.00 0.00 2.52
2786 2889 4.571580 TCACAATTCGTTACGTGGTTTCTT 59.428 37.500 4.24 0.00 0.00 2.52
2787 2890 4.121317 TCACAATTCGTTACGTGGTTTCT 58.879 39.130 4.24 0.00 0.00 2.52
2788 2891 4.455917 TCACAATTCGTTACGTGGTTTC 57.544 40.909 4.24 0.00 0.00 2.78
2789 2892 4.879104 TTCACAATTCGTTACGTGGTTT 57.121 36.364 4.24 0.00 0.00 3.27
2790 2893 6.542574 TTATTCACAATTCGTTACGTGGTT 57.457 33.333 4.24 0.00 0.00 3.67
2791 2894 6.347888 CCTTTATTCACAATTCGTTACGTGGT 60.348 38.462 4.24 0.00 0.00 4.16
2792 2895 6.019152 CCTTTATTCACAATTCGTTACGTGG 58.981 40.000 4.24 0.00 0.00 4.94
2793 2896 6.595794 ACCTTTATTCACAATTCGTTACGTG 58.404 36.000 4.24 0.00 0.00 4.49
2794 2897 6.647895 AGACCTTTATTCACAATTCGTTACGT 59.352 34.615 4.24 0.00 0.00 3.57
2795 2898 7.057149 AGACCTTTATTCACAATTCGTTACG 57.943 36.000 0.00 0.00 0.00 3.18
2796 2899 7.333672 AGGAGACCTTTATTCACAATTCGTTAC 59.666 37.037 0.00 0.00 0.00 2.50
2797 2900 7.391620 AGGAGACCTTTATTCACAATTCGTTA 58.608 34.615 0.00 0.00 0.00 3.18
2798 2901 6.238648 AGGAGACCTTTATTCACAATTCGTT 58.761 36.000 0.00 0.00 0.00 3.85
2799 2902 5.805728 AGGAGACCTTTATTCACAATTCGT 58.194 37.500 0.00 0.00 0.00 3.85
2800 2903 6.743575 AAGGAGACCTTTATTCACAATTCG 57.256 37.500 0.00 0.00 41.69 3.34
2814 2917 2.711009 TCACATGAACCAAAGGAGACCT 59.289 45.455 0.00 0.00 33.87 3.85
2815 2918 3.140325 TCACATGAACCAAAGGAGACC 57.860 47.619 0.00 0.00 0.00 3.85
2816 2919 4.878397 CCTATCACATGAACCAAAGGAGAC 59.122 45.833 0.00 0.00 0.00 3.36
2817 2920 4.782691 TCCTATCACATGAACCAAAGGAGA 59.217 41.667 0.00 0.00 0.00 3.71
2818 2921 5.102953 TCCTATCACATGAACCAAAGGAG 57.897 43.478 0.00 0.00 0.00 3.69
2819 2922 5.512942 TTCCTATCACATGAACCAAAGGA 57.487 39.130 0.00 0.95 0.00 3.36
2820 2923 7.720957 TGATATTCCTATCACATGAACCAAAGG 59.279 37.037 0.00 0.00 39.03 3.11
2821 2924 8.681486 TGATATTCCTATCACATGAACCAAAG 57.319 34.615 0.00 0.00 39.03 2.77
2852 2955 9.605275 TCATCTCGATTTCTGTGATTTTTCTAT 57.395 29.630 0.00 0.00 0.00 1.98
2853 2956 8.873830 GTCATCTCGATTTCTGTGATTTTTCTA 58.126 33.333 0.00 0.00 0.00 2.10
2854 2957 7.388776 TGTCATCTCGATTTCTGTGATTTTTCT 59.611 33.333 0.00 0.00 0.00 2.52
2855 2958 7.521529 TGTCATCTCGATTTCTGTGATTTTTC 58.478 34.615 0.00 0.00 0.00 2.29
2856 2959 7.439157 TGTCATCTCGATTTCTGTGATTTTT 57.561 32.000 0.00 0.00 0.00 1.94
2857 2960 7.120285 ACATGTCATCTCGATTTCTGTGATTTT 59.880 33.333 0.00 0.00 0.00 1.82
2858 2961 6.596888 ACATGTCATCTCGATTTCTGTGATTT 59.403 34.615 0.00 0.00 0.00 2.17
2859 2962 6.036844 CACATGTCATCTCGATTTCTGTGATT 59.963 38.462 0.00 0.00 34.81 2.57
2860 2963 5.522824 CACATGTCATCTCGATTTCTGTGAT 59.477 40.000 0.00 0.00 34.81 3.06
2861 2964 4.866486 CACATGTCATCTCGATTTCTGTGA 59.134 41.667 0.00 0.00 34.81 3.58
2862 2965 4.628766 ACACATGTCATCTCGATTTCTGTG 59.371 41.667 0.00 0.00 37.92 3.66
2863 2966 4.825422 ACACATGTCATCTCGATTTCTGT 58.175 39.130 0.00 0.00 0.00 3.41
2864 2967 5.386810 GACACATGTCATCTCGATTTCTG 57.613 43.478 7.15 0.00 44.18 3.02
2877 2980 8.893219 TGAATATAGGATTTGAGACACATGTC 57.107 34.615 3.72 3.72 45.08 3.06
2878 2981 9.685276 TTTGAATATAGGATTTGAGACACATGT 57.315 29.630 0.00 0.00 0.00 3.21
2884 2987 9.922305 CGTCTTTTTGAATATAGGATTTGAGAC 57.078 33.333 0.00 0.00 0.00 3.36
2885 2988 9.667107 ACGTCTTTTTGAATATAGGATTTGAGA 57.333 29.630 0.00 0.00 0.00 3.27
2891 2994 9.057089 GGATGAACGTCTTTTTGAATATAGGAT 57.943 33.333 0.00 0.00 0.00 3.24
2892 2995 8.265055 AGGATGAACGTCTTTTTGAATATAGGA 58.735 33.333 0.00 0.00 0.00 2.94
2893 2996 8.338259 CAGGATGAACGTCTTTTTGAATATAGG 58.662 37.037 0.00 0.00 39.69 2.57
2894 2997 7.852945 GCAGGATGAACGTCTTTTTGAATATAG 59.147 37.037 0.00 0.00 39.69 1.31
2895 2998 7.552687 AGCAGGATGAACGTCTTTTTGAATATA 59.447 33.333 0.00 0.00 39.69 0.86
2896 2999 6.375455 AGCAGGATGAACGTCTTTTTGAATAT 59.625 34.615 0.00 0.00 39.69 1.28
2897 3000 5.705441 AGCAGGATGAACGTCTTTTTGAATA 59.295 36.000 0.00 0.00 39.69 1.75
2898 3001 4.520492 AGCAGGATGAACGTCTTTTTGAAT 59.480 37.500 0.00 0.00 39.69 2.57
2899 3002 3.882888 AGCAGGATGAACGTCTTTTTGAA 59.117 39.130 0.00 0.00 39.69 2.69
2900 3003 3.476552 AGCAGGATGAACGTCTTTTTGA 58.523 40.909 0.00 0.00 39.69 2.69
2901 3004 3.904136 AGCAGGATGAACGTCTTTTTG 57.096 42.857 0.00 0.00 39.69 2.44
2902 3005 4.918810 AAAGCAGGATGAACGTCTTTTT 57.081 36.364 0.00 0.00 39.69 1.94
2903 3006 7.865706 ATATAAAGCAGGATGAACGTCTTTT 57.134 32.000 0.00 0.00 39.69 2.27
2924 3027 9.573166 TCTGTTTGCCTGCATTACTTTATATAT 57.427 29.630 0.00 0.00 0.00 0.86
2925 3028 8.972458 TCTGTTTGCCTGCATTACTTTATATA 57.028 30.769 0.00 0.00 0.00 0.86
2926 3029 7.880160 TCTGTTTGCCTGCATTACTTTATAT 57.120 32.000 0.00 0.00 0.00 0.86
2927 3030 7.880160 ATCTGTTTGCCTGCATTACTTTATA 57.120 32.000 0.00 0.00 0.00 0.98
2928 3031 6.780457 ATCTGTTTGCCTGCATTACTTTAT 57.220 33.333 0.00 0.00 0.00 1.40
2929 3032 6.657117 TGTATCTGTTTGCCTGCATTACTTTA 59.343 34.615 0.00 0.00 0.00 1.85
2930 3033 5.476599 TGTATCTGTTTGCCTGCATTACTTT 59.523 36.000 0.00 0.00 0.00 2.66
2931 3034 5.009631 TGTATCTGTTTGCCTGCATTACTT 58.990 37.500 0.00 0.00 0.00 2.24
2932 3035 4.588899 TGTATCTGTTTGCCTGCATTACT 58.411 39.130 0.00 0.00 0.00 2.24
2933 3036 4.963276 TGTATCTGTTTGCCTGCATTAC 57.037 40.909 0.00 0.00 0.00 1.89
2934 3037 7.501892 TCATTATGTATCTGTTTGCCTGCATTA 59.498 33.333 0.00 0.00 0.00 1.90
2935 3038 6.321945 TCATTATGTATCTGTTTGCCTGCATT 59.678 34.615 0.00 0.00 0.00 3.56
2936 3039 5.829391 TCATTATGTATCTGTTTGCCTGCAT 59.171 36.000 0.00 0.00 0.00 3.96
2937 3040 5.192176 TCATTATGTATCTGTTTGCCTGCA 58.808 37.500 0.00 0.00 0.00 4.41
2938 3041 5.756195 TCATTATGTATCTGTTTGCCTGC 57.244 39.130 0.00 0.00 0.00 4.85
2939 3042 7.308408 CCTCATCATTATGTATCTGTTTGCCTG 60.308 40.741 0.00 0.00 34.50 4.85
2940 3043 6.713903 CCTCATCATTATGTATCTGTTTGCCT 59.286 38.462 0.00 0.00 34.50 4.75
2941 3044 6.712095 TCCTCATCATTATGTATCTGTTTGCC 59.288 38.462 0.00 0.00 34.50 4.52
2942 3045 7.094890 CCTCCTCATCATTATGTATCTGTTTGC 60.095 40.741 0.00 0.00 34.50 3.68
2943 3046 7.389884 CCCTCCTCATCATTATGTATCTGTTTG 59.610 40.741 0.00 0.00 34.50 2.93
2944 3047 7.456725 CCCTCCTCATCATTATGTATCTGTTT 58.543 38.462 0.00 0.00 34.50 2.83
2945 3048 6.521427 GCCCTCCTCATCATTATGTATCTGTT 60.521 42.308 0.00 0.00 34.50 3.16
2946 3049 5.046014 GCCCTCCTCATCATTATGTATCTGT 60.046 44.000 0.00 0.00 34.50 3.41
2947 3050 5.426504 GCCCTCCTCATCATTATGTATCTG 58.573 45.833 0.00 0.00 34.50 2.90
2948 3051 4.472833 GGCCCTCCTCATCATTATGTATCT 59.527 45.833 0.00 0.00 34.50 1.98
2949 3052 4.472833 AGGCCCTCCTCATCATTATGTATC 59.527 45.833 0.00 0.00 38.72 2.24
2950 3053 4.442707 AGGCCCTCCTCATCATTATGTAT 58.557 43.478 0.00 0.00 38.72 2.29
2951 3054 3.874316 AGGCCCTCCTCATCATTATGTA 58.126 45.455 0.00 0.00 38.72 2.29
2952 3055 2.711174 AGGCCCTCCTCATCATTATGT 58.289 47.619 0.00 0.00 38.72 2.29
2953 3056 3.803186 AAGGCCCTCCTCATCATTATG 57.197 47.619 0.00 0.00 43.40 1.90
2954 3057 4.821532 AAAAGGCCCTCCTCATCATTAT 57.178 40.909 0.00 0.00 43.40 1.28
2955 3058 5.930209 ATAAAAGGCCCTCCTCATCATTA 57.070 39.130 0.00 0.00 43.40 1.90
2956 3059 4.821532 ATAAAAGGCCCTCCTCATCATT 57.178 40.909 0.00 0.00 43.40 2.57
2957 3060 5.165652 TCTATAAAAGGCCCTCCTCATCAT 58.834 41.667 0.00 0.00 43.40 2.45
2958 3061 4.566837 TCTATAAAAGGCCCTCCTCATCA 58.433 43.478 0.00 0.00 43.40 3.07
2959 3062 4.564613 GCTCTATAAAAGGCCCTCCTCATC 60.565 50.000 0.00 0.00 43.40 2.92
2960 3063 3.329225 GCTCTATAAAAGGCCCTCCTCAT 59.671 47.826 0.00 0.00 43.40 2.90
2961 3064 2.706190 GCTCTATAAAAGGCCCTCCTCA 59.294 50.000 0.00 0.00 43.40 3.86
2962 3065 2.706190 TGCTCTATAAAAGGCCCTCCTC 59.294 50.000 0.00 0.00 43.40 3.71
2964 3067 2.706190 TCTGCTCTATAAAAGGCCCTCC 59.294 50.000 0.00 0.00 0.00 4.30
2965 3068 4.040952 TCATCTGCTCTATAAAAGGCCCTC 59.959 45.833 0.00 0.00 0.00 4.30
2966 3069 3.976654 TCATCTGCTCTATAAAAGGCCCT 59.023 43.478 0.00 0.00 0.00 5.19
2967 3070 4.357918 TCATCTGCTCTATAAAAGGCCC 57.642 45.455 0.00 0.00 0.00 5.80
2968 3071 5.240403 CCTTTCATCTGCTCTATAAAAGGCC 59.760 44.000 0.00 0.00 36.09 5.19
2969 3072 5.825151 ACCTTTCATCTGCTCTATAAAAGGC 59.175 40.000 10.13 0.00 43.14 4.35
2970 3073 8.964476 TTACCTTTCATCTGCTCTATAAAAGG 57.036 34.615 8.93 8.93 44.29 3.11
2973 3076 9.733556 TGTTTTACCTTTCATCTGCTCTATAAA 57.266 29.630 0.00 0.00 0.00 1.40
2974 3077 9.905713 ATGTTTTACCTTTCATCTGCTCTATAA 57.094 29.630 0.00 0.00 0.00 0.98
2976 3079 9.905713 TTATGTTTTACCTTTCATCTGCTCTAT 57.094 29.630 0.00 0.00 0.00 1.98
2977 3080 9.733556 TTTATGTTTTACCTTTCATCTGCTCTA 57.266 29.630 0.00 0.00 0.00 2.43
2978 3081 8.635765 TTTATGTTTTACCTTTCATCTGCTCT 57.364 30.769 0.00 0.00 0.00 4.09
2979 3082 9.691362 TTTTTATGTTTTACCTTTCATCTGCTC 57.309 29.630 0.00 0.00 0.00 4.26
3008 3111 2.467880 TGTGGTAGGTGAGGATTCTCC 58.532 52.381 0.00 0.00 39.23 3.71
3009 3112 4.553330 TTTGTGGTAGGTGAGGATTCTC 57.447 45.455 0.00 0.00 40.36 2.87
3010 3113 4.807643 GCTTTTGTGGTAGGTGAGGATTCT 60.808 45.833 0.00 0.00 0.00 2.40
3011 3114 3.440522 GCTTTTGTGGTAGGTGAGGATTC 59.559 47.826 0.00 0.00 0.00 2.52
3012 3115 3.181434 TGCTTTTGTGGTAGGTGAGGATT 60.181 43.478 0.00 0.00 0.00 3.01
3013 3116 2.375174 TGCTTTTGTGGTAGGTGAGGAT 59.625 45.455 0.00 0.00 0.00 3.24
3014 3117 1.771854 TGCTTTTGTGGTAGGTGAGGA 59.228 47.619 0.00 0.00 0.00 3.71
3015 3118 2.270352 TGCTTTTGTGGTAGGTGAGG 57.730 50.000 0.00 0.00 0.00 3.86
3016 3119 2.293399 GGTTGCTTTTGTGGTAGGTGAG 59.707 50.000 0.00 0.00 0.00 3.51
3017 3120 2.092103 AGGTTGCTTTTGTGGTAGGTGA 60.092 45.455 0.00 0.00 0.00 4.02
3018 3121 2.306847 AGGTTGCTTTTGTGGTAGGTG 58.693 47.619 0.00 0.00 0.00 4.00
3019 3122 2.748209 AGGTTGCTTTTGTGGTAGGT 57.252 45.000 0.00 0.00 0.00 3.08
3020 3123 3.081804 CCTAGGTTGCTTTTGTGGTAGG 58.918 50.000 0.00 0.00 0.00 3.18
3021 3124 3.751518 ACCTAGGTTGCTTTTGTGGTAG 58.248 45.455 9.21 0.00 0.00 3.18
3022 3125 3.868619 ACCTAGGTTGCTTTTGTGGTA 57.131 42.857 9.21 0.00 0.00 3.25
3023 3126 2.748209 ACCTAGGTTGCTTTTGTGGT 57.252 45.000 9.21 0.00 0.00 4.16
3024 3127 3.254903 GGTAACCTAGGTTGCTTTTGTGG 59.745 47.826 33.12 0.00 39.93 4.17
3025 3128 3.058501 CGGTAACCTAGGTTGCTTTTGTG 60.059 47.826 33.12 17.17 39.93 3.33
3026 3129 3.143728 CGGTAACCTAGGTTGCTTTTGT 58.856 45.455 33.12 12.36 39.93 2.83
3027 3130 3.404899 TCGGTAACCTAGGTTGCTTTTG 58.595 45.455 33.12 22.76 39.93 2.44
3028 3131 3.072038 ACTCGGTAACCTAGGTTGCTTTT 59.928 43.478 33.12 17.62 39.93 2.27
3029 3132 2.636403 ACTCGGTAACCTAGGTTGCTTT 59.364 45.455 33.12 17.33 39.93 3.51
3030 3133 2.254508 ACTCGGTAACCTAGGTTGCTT 58.745 47.619 33.12 17.62 39.93 3.91
3031 3134 1.934410 ACTCGGTAACCTAGGTTGCT 58.066 50.000 33.12 17.05 39.93 3.91
3032 3135 3.445096 TCTTACTCGGTAACCTAGGTTGC 59.555 47.826 33.19 31.01 38.92 4.17
3033 3136 5.393896 CCTTCTTACTCGGTAACCTAGGTTG 60.394 48.000 33.19 20.00 38.92 3.77
3034 3137 4.708909 CCTTCTTACTCGGTAACCTAGGTT 59.291 45.833 29.46 29.46 41.65 3.50
3035 3138 4.018050 TCCTTCTTACTCGGTAACCTAGGT 60.018 45.833 9.21 9.21 0.00 3.08
3036 3139 4.530875 TCCTTCTTACTCGGTAACCTAGG 58.469 47.826 7.41 7.41 0.00 3.02
3037 3140 5.416952 TGTTCCTTCTTACTCGGTAACCTAG 59.583 44.000 0.00 0.00 0.00 3.02
3038 3141 5.324409 TGTTCCTTCTTACTCGGTAACCTA 58.676 41.667 0.00 0.00 0.00 3.08
3039 3142 4.154942 TGTTCCTTCTTACTCGGTAACCT 58.845 43.478 0.00 0.00 0.00 3.50
3040 3143 4.525912 TGTTCCTTCTTACTCGGTAACC 57.474 45.455 0.00 0.00 0.00 2.85
3041 3144 5.536260 AGTTGTTCCTTCTTACTCGGTAAC 58.464 41.667 0.00 0.00 0.00 2.50
3042 3145 5.776744 GAGTTGTTCCTTCTTACTCGGTAA 58.223 41.667 0.00 0.00 0.00 2.85
3043 3146 5.382618 GAGTTGTTCCTTCTTACTCGGTA 57.617 43.478 0.00 0.00 0.00 4.02
3044 3147 4.254402 GAGTTGTTCCTTCTTACTCGGT 57.746 45.455 0.00 0.00 0.00 4.69
3047 3150 2.994578 GGCGAGTTGTTCCTTCTTACTC 59.005 50.000 0.00 0.00 33.58 2.59
3048 3151 2.633481 AGGCGAGTTGTTCCTTCTTACT 59.367 45.455 0.00 0.00 0.00 2.24
3049 3152 2.994578 GAGGCGAGTTGTTCCTTCTTAC 59.005 50.000 0.00 0.00 0.00 2.34
3050 3153 2.028385 GGAGGCGAGTTGTTCCTTCTTA 60.028 50.000 0.00 0.00 0.00 2.10
3051 3154 1.270893 GGAGGCGAGTTGTTCCTTCTT 60.271 52.381 0.00 0.00 0.00 2.52
3052 3155 0.321996 GGAGGCGAGTTGTTCCTTCT 59.678 55.000 0.00 0.00 0.00 2.85
3053 3156 0.034896 TGGAGGCGAGTTGTTCCTTC 59.965 55.000 0.00 0.00 0.00 3.46
3054 3157 0.472471 TTGGAGGCGAGTTGTTCCTT 59.528 50.000 0.00 0.00 0.00 3.36
3055 3158 0.035458 CTTGGAGGCGAGTTGTTCCT 59.965 55.000 0.00 0.00 0.00 3.36
3056 3159 0.955919 CCTTGGAGGCGAGTTGTTCC 60.956 60.000 0.00 0.00 0.00 3.62
3057 3160 0.034896 TCCTTGGAGGCGAGTTGTTC 59.965 55.000 0.00 0.00 34.61 3.18
3058 3161 0.472471 TTCCTTGGAGGCGAGTTGTT 59.528 50.000 0.00 0.00 34.61 2.83
3059 3162 0.472471 TTTCCTTGGAGGCGAGTTGT 59.528 50.000 0.00 0.00 34.61 3.32
3060 3163 1.604604 TTTTCCTTGGAGGCGAGTTG 58.395 50.000 0.00 0.00 34.61 3.16
3061 3164 2.437413 GATTTTCCTTGGAGGCGAGTT 58.563 47.619 0.00 0.00 34.61 3.01
3062 3165 1.676014 CGATTTTCCTTGGAGGCGAGT 60.676 52.381 0.00 0.00 34.61 4.18
3063 3166 1.009829 CGATTTTCCTTGGAGGCGAG 58.990 55.000 0.00 0.00 34.61 5.03
3064 3167 1.024579 GCGATTTTCCTTGGAGGCGA 61.025 55.000 0.00 0.00 34.61 5.54
3065 3168 1.429423 GCGATTTTCCTTGGAGGCG 59.571 57.895 0.00 0.00 34.61 5.52
3066 3169 1.667154 GGGCGATTTTCCTTGGAGGC 61.667 60.000 0.00 0.00 34.61 4.70
3067 3170 1.376609 CGGGCGATTTTCCTTGGAGG 61.377 60.000 0.00 0.00 36.46 4.30
3068 3171 1.376609 CCGGGCGATTTTCCTTGGAG 61.377 60.000 0.00 0.00 0.00 3.86
3069 3172 1.377987 CCGGGCGATTTTCCTTGGA 60.378 57.895 0.00 0.00 0.00 3.53
3070 3173 3.063743 GCCGGGCGATTTTCCTTGG 62.064 63.158 1.81 0.00 0.00 3.61
3071 3174 2.489751 GCCGGGCGATTTTCCTTG 59.510 61.111 1.81 0.00 0.00 3.61
3072 3175 2.754254 GGCCGGGCGATTTTCCTT 60.754 61.111 14.21 0.00 0.00 3.36
3073 3176 3.699134 GAGGCCGGGCGATTTTCCT 62.699 63.158 23.81 7.63 0.00 3.36
3074 3177 3.209812 GAGGCCGGGCGATTTTCC 61.210 66.667 23.81 1.78 0.00 3.13
3075 3178 3.573491 CGAGGCCGGGCGATTTTC 61.573 66.667 23.81 13.28 0.00 2.29
3076 3179 3.912745 AACGAGGCCGGGCGATTTT 62.913 57.895 23.81 11.67 40.78 1.82
3077 3180 4.404098 AACGAGGCCGGGCGATTT 62.404 61.111 23.81 13.56 40.78 2.17
3097 3200 4.980903 CAACTTGGTGTGCGCGGC 62.981 66.667 8.83 0.00 0.00 6.53
3098 3201 1.777030 TAACAACTTGGTGTGCGCGG 61.777 55.000 8.83 0.00 0.00 6.46
3099 3202 0.237235 ATAACAACTTGGTGTGCGCG 59.763 50.000 0.00 0.00 0.00 6.86
3100 3203 1.724654 CGATAACAACTTGGTGTGCGC 60.725 52.381 0.00 0.00 0.00 6.09
3101 3204 1.136085 CCGATAACAACTTGGTGTGCG 60.136 52.381 0.00 0.00 0.00 5.34
3102 3205 2.147958 TCCGATAACAACTTGGTGTGC 58.852 47.619 0.00 0.00 0.00 4.57
3103 3206 3.659786 TCTCCGATAACAACTTGGTGTG 58.340 45.455 0.00 0.00 0.00 3.82
3104 3207 3.306780 CCTCTCCGATAACAACTTGGTGT 60.307 47.826 0.00 0.00 0.00 4.16
3105 3208 3.056107 TCCTCTCCGATAACAACTTGGTG 60.056 47.826 0.00 0.00 0.00 4.17
3106 3209 3.170717 TCCTCTCCGATAACAACTTGGT 58.829 45.455 0.00 0.00 0.00 3.67
3107 3210 3.887621 TCCTCTCCGATAACAACTTGG 57.112 47.619 0.00 0.00 0.00 3.61
3108 3211 8.438676 AATAATTCCTCTCCGATAACAACTTG 57.561 34.615 0.00 0.00 0.00 3.16
3109 3212 9.462606 AAAATAATTCCTCTCCGATAACAACTT 57.537 29.630 0.00 0.00 0.00 2.66
3110 3213 9.462606 AAAAATAATTCCTCTCCGATAACAACT 57.537 29.630 0.00 0.00 0.00 3.16
3111 3214 9.717892 GAAAAATAATTCCTCTCCGATAACAAC 57.282 33.333 0.00 0.00 0.00 3.32
3112 3215 8.899771 GGAAAAATAATTCCTCTCCGATAACAA 58.100 33.333 0.00 0.00 44.54 2.83
3113 3216 7.501225 GGGAAAAATAATTCCTCTCCGATAACA 59.499 37.037 6.08 0.00 46.66 2.41
3114 3217 7.720074 AGGGAAAAATAATTCCTCTCCGATAAC 59.280 37.037 6.08 0.00 46.66 1.89
3115 3218 7.812306 AGGGAAAAATAATTCCTCTCCGATAA 58.188 34.615 6.08 0.00 46.66 1.75
3116 3219 7.388638 AGGGAAAAATAATTCCTCTCCGATA 57.611 36.000 6.08 0.00 46.66 2.92
3117 3220 6.267492 AGGGAAAAATAATTCCTCTCCGAT 57.733 37.500 6.08 0.00 46.66 4.18
3118 3221 5.710409 AGGGAAAAATAATTCCTCTCCGA 57.290 39.130 6.08 0.00 46.66 4.55
3119 3222 6.706716 GTCTAGGGAAAAATAATTCCTCTCCG 59.293 42.308 6.08 0.00 46.66 4.63
3120 3223 6.706716 CGTCTAGGGAAAAATAATTCCTCTCC 59.293 42.308 6.08 0.00 46.66 3.71
3121 3224 7.273712 ACGTCTAGGGAAAAATAATTCCTCTC 58.726 38.462 6.08 0.00 46.66 3.20
3122 3225 7.125963 AGACGTCTAGGGAAAAATAATTCCTCT 59.874 37.037 18.46 4.70 46.66 3.69
3123 3226 7.273712 AGACGTCTAGGGAAAAATAATTCCTC 58.726 38.462 18.46 0.00 46.66 3.71
3124 3227 7.093024 TGAGACGTCTAGGGAAAAATAATTCCT 60.093 37.037 20.09 0.00 46.66 3.36
3125 3228 7.046033 TGAGACGTCTAGGGAAAAATAATTCC 58.954 38.462 20.09 0.00 46.74 3.01
3126 3229 8.488651 TTGAGACGTCTAGGGAAAAATAATTC 57.511 34.615 20.09 0.47 0.00 2.17
3127 3230 8.857694 TTTGAGACGTCTAGGGAAAAATAATT 57.142 30.769 20.09 0.00 0.00 1.40
3128 3231 9.462606 AATTTGAGACGTCTAGGGAAAAATAAT 57.537 29.630 20.09 3.67 0.00 1.28
3129 3232 8.857694 AATTTGAGACGTCTAGGGAAAAATAA 57.142 30.769 20.09 1.51 0.00 1.40
3130 3233 8.319146 AGAATTTGAGACGTCTAGGGAAAAATA 58.681 33.333 20.09 0.00 0.00 1.40
3131 3234 7.168905 AGAATTTGAGACGTCTAGGGAAAAAT 58.831 34.615 20.09 13.78 0.00 1.82
3132 3235 6.531021 AGAATTTGAGACGTCTAGGGAAAAA 58.469 36.000 20.09 12.22 0.00 1.94
3133 3236 6.110411 AGAATTTGAGACGTCTAGGGAAAA 57.890 37.500 20.09 13.88 0.00 2.29
3134 3237 5.740290 AGAATTTGAGACGTCTAGGGAAA 57.260 39.130 20.09 14.75 0.00 3.13
3135 3238 7.230913 CCTATAGAATTTGAGACGTCTAGGGAA 59.769 40.741 20.09 11.05 0.00 3.97
3136 3239 6.715718 CCTATAGAATTTGAGACGTCTAGGGA 59.284 42.308 20.09 5.45 0.00 4.20
3137 3240 6.715718 TCCTATAGAATTTGAGACGTCTAGGG 59.284 42.308 20.09 7.05 0.00 3.53
3138 3241 7.747155 TCCTATAGAATTTGAGACGTCTAGG 57.253 40.000 20.09 16.82 0.00 3.02
3159 3262 9.479549 AGACAACCAAATGACATATATTTTCCT 57.520 29.630 0.00 0.00 0.00 3.36
3166 3269 9.184523 CCCTAAAAGACAACCAAATGACATATA 57.815 33.333 0.00 0.00 0.00 0.86
3167 3270 7.893302 TCCCTAAAAGACAACCAAATGACATAT 59.107 33.333 0.00 0.00 0.00 1.78
3168 3271 7.175990 GTCCCTAAAAGACAACCAAATGACATA 59.824 37.037 0.00 0.00 34.27 2.29
3169 3272 6.015434 GTCCCTAAAAGACAACCAAATGACAT 60.015 38.462 0.00 0.00 34.27 3.06
3170 3273 5.300792 GTCCCTAAAAGACAACCAAATGACA 59.699 40.000 0.00 0.00 34.27 3.58
3171 3274 5.300792 TGTCCCTAAAAGACAACCAAATGAC 59.699 40.000 0.00 0.00 41.17 3.06
3172 3275 5.450453 TGTCCCTAAAAGACAACCAAATGA 58.550 37.500 0.00 0.00 41.17 2.57
3173 3276 5.782893 TGTCCCTAAAAGACAACCAAATG 57.217 39.130 0.00 0.00 41.17 2.32
3174 3277 6.994421 AATGTCCCTAAAAGACAACCAAAT 57.006 33.333 0.00 0.00 46.67 2.32
3175 3278 6.381420 TCAAATGTCCCTAAAAGACAACCAAA 59.619 34.615 0.00 0.00 46.67 3.28
3176 3279 5.894393 TCAAATGTCCCTAAAAGACAACCAA 59.106 36.000 0.00 0.00 46.67 3.67
3177 3280 5.450453 TCAAATGTCCCTAAAAGACAACCA 58.550 37.500 0.00 0.00 46.67 3.67
3178 3281 6.590234 ATCAAATGTCCCTAAAAGACAACC 57.410 37.500 0.00 0.00 46.67 3.77
3182 3285 9.586435 CCAATTTATCAAATGTCCCTAAAAGAC 57.414 33.333 0.00 0.00 34.72 3.01
3183 3286 9.540538 TCCAATTTATCAAATGTCCCTAAAAGA 57.459 29.630 0.00 0.00 0.00 2.52
3185 3288 9.936759 GTTCCAATTTATCAAATGTCCCTAAAA 57.063 29.630 0.00 0.00 0.00 1.52
3186 3289 9.094578 TGTTCCAATTTATCAAATGTCCCTAAA 57.905 29.630 0.00 0.00 0.00 1.85
3187 3290 8.657387 TGTTCCAATTTATCAAATGTCCCTAA 57.343 30.769 0.00 0.00 0.00 2.69
3188 3291 7.893302 ACTGTTCCAATTTATCAAATGTCCCTA 59.107 33.333 0.00 0.00 0.00 3.53
3189 3292 6.725834 ACTGTTCCAATTTATCAAATGTCCCT 59.274 34.615 0.00 0.00 0.00 4.20
3190 3293 6.935167 ACTGTTCCAATTTATCAAATGTCCC 58.065 36.000 0.00 0.00 0.00 4.46
3191 3294 9.573133 CTTACTGTTCCAATTTATCAAATGTCC 57.427 33.333 0.00 0.00 0.00 4.02
3192 3295 9.573133 CCTTACTGTTCCAATTTATCAAATGTC 57.427 33.333 0.00 0.00 0.00 3.06
3193 3296 8.531146 CCCTTACTGTTCCAATTTATCAAATGT 58.469 33.333 0.00 0.00 0.00 2.71
3194 3297 7.492344 GCCCTTACTGTTCCAATTTATCAAATG 59.508 37.037 0.00 0.00 0.00 2.32
3195 3298 7.555965 GCCCTTACTGTTCCAATTTATCAAAT 58.444 34.615 0.00 0.00 0.00 2.32
3196 3299 6.930731 GCCCTTACTGTTCCAATTTATCAAA 58.069 36.000 0.00 0.00 0.00 2.69
3197 3300 6.524101 GCCCTTACTGTTCCAATTTATCAA 57.476 37.500 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.