Multiple sequence alignment - TraesCS4A01G042500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G042500 chr4A 100.000 4928 0 0 1 4928 35624154 35629081 0.000000e+00 9101
1 TraesCS4A01G042500 chr4A 88.957 163 15 2 4477 4636 469242894 469243056 1.080000e-46 198
2 TraesCS4A01G042500 chr4D 97.098 1585 44 2 1850 3434 434273899 434275481 0.000000e+00 2671
3 TraesCS4A01G042500 chr4D 92.512 1055 59 8 3431 4483 434275517 434276553 0.000000e+00 1493
4 TraesCS4A01G042500 chr4D 93.767 722 35 5 1 721 434272124 434272836 0.000000e+00 1075
5 TraesCS4A01G042500 chr4D 87.000 700 48 21 849 1527 434272998 434273675 0.000000e+00 749
6 TraesCS4A01G042500 chr4D 89.441 161 12 4 4481 4636 21147893 21147733 1.080000e-46 198
7 TraesCS4A01G042500 chr4D 94.318 88 4 1 4752 4839 434277132 434277218 3.090000e-27 134
8 TraesCS4A01G042500 chr4B 94.926 1143 44 6 2302 3434 533499464 533500602 0.000000e+00 1777
9 TraesCS4A01G042500 chr4B 93.785 724 39 3 1 721 533495796 533496516 0.000000e+00 1083
10 TraesCS4A01G042500 chr4B 91.483 681 40 6 3431 4111 533500638 533501300 0.000000e+00 920
11 TraesCS4A01G042500 chr4B 83.834 866 74 38 757 1589 533497833 533498665 0.000000e+00 763
12 TraesCS4A01G042500 chr3B 89.474 171 12 5 4481 4646 68913478 68913647 1.390000e-50 211
13 TraesCS4A01G042500 chr5D 89.157 166 13 3 4480 4640 461072601 461072766 8.360000e-48 202
14 TraesCS4A01G042500 chr2D 89.506 162 11 5 4480 4636 617215187 617215347 3.010000e-47 200
15 TraesCS4A01G042500 chr2D 87.209 172 18 4 4478 4645 153795000 153795171 5.030000e-45 193
16 TraesCS4A01G042500 chr2D 87.209 172 18 4 4478 4645 153800656 153800827 5.030000e-45 193
17 TraesCS4A01G042500 chr2A 87.931 174 15 5 4481 4649 676177807 676177979 3.010000e-47 200
18 TraesCS4A01G042500 chr1D 88.957 163 13 4 4479 4636 103408716 103408878 3.890000e-46 196
19 TraesCS4A01G042500 chr1D 94.059 101 5 1 1627 1727 41575114 41575213 8.540000e-33 152
20 TraesCS4A01G042500 chr5A 95.238 105 1 4 1638 1740 674574366 674574264 3.950000e-36 163
21 TraesCS4A01G042500 chr7A 93.396 106 4 3 1617 1722 634931347 634931245 2.380000e-33 154
22 TraesCS4A01G042500 chr6B 94.949 99 4 1 1627 1725 12465753 12465850 2.380000e-33 154
23 TraesCS4A01G042500 chr7D 92.523 107 5 3 1626 1731 4013506 4013610 3.070000e-32 150
24 TraesCS4A01G042500 chr7D 88.889 117 11 2 1637 1751 104453563 104453447 5.140000e-30 143
25 TraesCS4A01G042500 chr7D 90.179 112 8 3 1613 1724 343751906 343752014 5.140000e-30 143
26 TraesCS4A01G042500 chr7B 92.308 104 8 0 1621 1724 616099864 616099761 1.110000e-31 148
27 TraesCS4A01G042500 chr1A 92.233 103 8 0 1637 1739 540345734 540345836 3.980000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G042500 chr4A 35624154 35629081 4927 False 9101.00 9101 100.000 1 4928 1 chr4A.!!$F1 4927
1 TraesCS4A01G042500 chr4D 434272124 434277218 5094 False 1224.40 2671 92.939 1 4839 5 chr4D.!!$F1 4838
2 TraesCS4A01G042500 chr4B 533495796 533501300 5504 False 1135.75 1777 91.007 1 4111 4 chr4B.!!$F1 4110

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
819 2105 0.036164 GCCATGGTTTCCCCCAAAAC 59.964 55.0 14.67 0.00 38.2 2.43 F
846 2132 0.180406 AGCCGGACAACTGTTGAAGT 59.820 50.0 26.00 4.65 42.6 3.01 F
1547 2888 0.250901 ACGCATTGCCTCCTTGTCTT 60.251 50.0 2.41 0.00 0.0 3.01 F
1782 3123 0.320073 TCGTGGGTTCTTGGTTAGCG 60.320 55.0 0.00 0.00 0.0 4.26 F
3043 4778 0.729116 AATTGCAGATCGTCTTGGCG 59.271 50.0 0.00 0.00 0.0 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1765 3106 0.887387 TGCGCTAACCAAGAACCCAC 60.887 55.000 9.73 0.0 0.00 4.61 R
1766 3107 0.887387 GTGCGCTAACCAAGAACCCA 60.887 55.000 9.73 0.0 0.00 4.51 R
2523 4258 1.596954 GCACCAAACAGTAACTGCACG 60.597 52.381 0.00 0.0 34.37 5.34 R
3457 5269 2.589014 GCCAGAAGCATGAAAACTTCG 58.411 47.619 0.00 0.0 45.56 3.79 R
4894 7174 0.249489 GGGCTGCGAGGTGTATGTAG 60.249 60.000 0.00 0.0 0.00 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 2.275380 GGGTTGGCAGCCGAATGTT 61.275 57.895 14.54 0.00 0.00 2.71
332 333 4.385405 GTGAGACGCAGCTGGGCT 62.385 66.667 28.90 24.75 40.77 5.19
361 362 2.281484 TTTCTGTCTGGGCGTGGC 60.281 61.111 0.00 0.00 0.00 5.01
629 632 2.147436 TTGGCGTGCCTTTCAATTTC 57.853 45.000 12.84 0.00 36.94 2.17
641 645 5.481105 CCTTTCAATTTCTTGCATTGCCTA 58.519 37.500 6.12 0.00 32.49 3.93
692 697 4.022329 ACCCATTTTGAACACGGAGATTTC 60.022 41.667 0.00 0.00 0.00 2.17
721 726 7.069344 TGGATCTTCCAGTAGTTGATCATCTA 58.931 38.462 9.07 9.07 42.67 1.98
727 732 9.689976 CTTCCAGTAGTTGATCATCTAATACAG 57.310 37.037 13.82 6.96 28.14 2.74
728 733 8.996651 TCCAGTAGTTGATCATCTAATACAGA 57.003 34.615 13.82 8.62 37.79 3.41
729 734 9.072375 TCCAGTAGTTGATCATCTAATACAGAG 57.928 37.037 13.82 2.87 36.48 3.35
730 735 9.072375 CCAGTAGTTGATCATCTAATACAGAGA 57.928 37.037 13.82 0.00 36.48 3.10
735 740 9.270640 AGTTGATCATCTAATACAGAGATTTGC 57.729 33.333 4.42 0.00 36.48 3.68
736 741 8.502387 GTTGATCATCTAATACAGAGATTTGCC 58.498 37.037 0.00 0.00 36.48 4.52
737 742 7.971201 TGATCATCTAATACAGAGATTTGCCT 58.029 34.615 0.00 0.00 36.48 4.75
738 743 8.093307 TGATCATCTAATACAGAGATTTGCCTC 58.907 37.037 0.00 0.00 36.48 4.70
740 745 7.971201 TCATCTAATACAGAGATTTGCCTCAT 58.029 34.615 0.00 0.00 36.48 2.90
742 747 9.064706 CATCTAATACAGAGATTTGCCTCATTT 57.935 33.333 0.00 0.00 36.48 2.32
773 2059 5.220710 AGTACAGAGATGCAGTTGAGTTT 57.779 39.130 0.00 0.00 0.00 2.66
782 2068 3.016031 TGCAGTTGAGTTTCAAGCAGAA 58.984 40.909 2.72 0.00 37.00 3.02
810 2096 2.993220 GGTGAAAAATCGCCATGGTTTC 59.007 45.455 14.67 14.73 39.90 2.78
811 2097 2.993220 GTGAAAAATCGCCATGGTTTCC 59.007 45.455 14.67 5.73 0.00 3.13
814 2100 0.975556 AAATCGCCATGGTTTCCCCC 60.976 55.000 14.67 0.00 0.00 5.40
815 2101 2.161713 AATCGCCATGGTTTCCCCCA 62.162 55.000 14.67 0.00 39.27 4.96
816 2102 2.161713 ATCGCCATGGTTTCCCCCAA 62.162 55.000 14.67 0.00 38.20 4.12
817 2103 1.910772 CGCCATGGTTTCCCCCAAA 60.911 57.895 14.67 0.00 38.20 3.28
818 2104 1.476007 CGCCATGGTTTCCCCCAAAA 61.476 55.000 14.67 0.00 38.20 2.44
819 2105 0.036164 GCCATGGTTTCCCCCAAAAC 59.964 55.000 14.67 0.00 38.20 2.43
820 2106 1.428869 CCATGGTTTCCCCCAAAACA 58.571 50.000 2.57 0.00 46.01 2.83
823 2109 0.761802 TGGTTTCCCCCAAAACATGC 59.238 50.000 0.00 0.00 36.72 4.06
824 2110 1.055849 GGTTTCCCCCAAAACATGCT 58.944 50.000 0.00 0.00 40.22 3.79
825 2111 2.252714 GGTTTCCCCCAAAACATGCTA 58.747 47.619 0.00 0.00 40.22 3.49
826 2112 2.635427 GGTTTCCCCCAAAACATGCTAA 59.365 45.455 0.00 0.00 40.22 3.09
827 2113 3.071747 GGTTTCCCCCAAAACATGCTAAA 59.928 43.478 0.00 0.00 40.22 1.85
828 2114 4.314961 GTTTCCCCCAAAACATGCTAAAG 58.685 43.478 0.00 0.00 38.68 1.85
829 2115 1.899142 TCCCCCAAAACATGCTAAAGC 59.101 47.619 0.00 0.00 42.50 3.51
830 2116 1.066215 CCCCCAAAACATGCTAAAGCC 60.066 52.381 0.00 0.00 41.18 4.35
831 2117 1.404047 CCCCAAAACATGCTAAAGCCG 60.404 52.381 0.00 0.00 41.18 5.52
843 2129 2.489971 CTAAAGCCGGACAACTGTTGA 58.510 47.619 26.00 0.35 0.00 3.18
844 2130 1.757682 AAAGCCGGACAACTGTTGAA 58.242 45.000 26.00 0.00 0.00 2.69
846 2132 0.180406 AGCCGGACAACTGTTGAAGT 59.820 50.000 26.00 4.65 42.60 3.01
847 2133 0.307760 GCCGGACAACTGTTGAAGTG 59.692 55.000 26.00 12.56 39.81 3.16
850 2157 3.199677 CCGGACAACTGTTGAAGTGTAA 58.800 45.455 26.00 0.00 39.81 2.41
861 2168 7.202526 ACTGTTGAAGTGTAAATCACAATTGG 58.797 34.615 10.83 0.00 45.02 3.16
875 2182 5.609423 TCACAATTGGACAAATTTGAAGGG 58.391 37.500 24.64 9.18 36.28 3.95
880 2187 1.696884 GGACAAATTTGAAGGGCCCAA 59.303 47.619 27.56 10.13 0.00 4.12
948 2255 4.035102 GGCCTTCCAACGCCTCCT 62.035 66.667 0.00 0.00 42.21 3.69
949 2256 2.436824 GCCTTCCAACGCCTCCTC 60.437 66.667 0.00 0.00 0.00 3.71
950 2257 2.269241 CCTTCCAACGCCTCCTCC 59.731 66.667 0.00 0.00 0.00 4.30
951 2258 2.294078 CCTTCCAACGCCTCCTCCT 61.294 63.158 0.00 0.00 0.00 3.69
1021 2334 2.603473 CCGTCTCCACCTCCACCA 60.603 66.667 0.00 0.00 0.00 4.17
1093 2406 4.214327 CGCTCTCCTTCGCCTCCC 62.214 72.222 0.00 0.00 0.00 4.30
1164 2483 4.415150 ACCCTCGCCGACGACCTA 62.415 66.667 0.00 0.00 45.12 3.08
1205 2524 0.298707 CGTGATACGTGAGCATGTGC 59.701 55.000 0.00 0.00 36.74 4.57
1206 2525 2.063659 CGTGATACGTGAGCATGTGCT 61.064 52.381 7.31 7.31 45.31 4.40
1207 2526 3.554277 CGTGATACGTGAGCATGTGCTT 61.554 50.000 9.14 0.00 43.77 3.91
1217 2549 2.949714 GCATGTGCTTTCGCGTATAT 57.050 45.000 5.77 0.00 39.65 0.86
1224 2556 2.997303 TGCTTTCGCGTATATGTGTTGT 59.003 40.909 5.77 0.00 39.65 3.32
1235 2567 6.953743 GCGTATATGTGTTGTGAAACTTGTAG 59.046 38.462 0.00 0.00 38.04 2.74
1237 2569 8.869897 CGTATATGTGTTGTGAAACTTGTAGAT 58.130 33.333 0.00 0.00 38.04 1.98
1250 2582 7.443879 TGAAACTTGTAGATTGCATTGTAGACA 59.556 33.333 0.00 0.00 0.00 3.41
1262 2595 5.347635 TGCATTGTAGACATGTTCTCGTTAC 59.652 40.000 0.00 0.00 35.55 2.50
1298 2636 1.338674 TGGAGGCATTGGTACAGTTCG 60.339 52.381 0.00 0.00 42.39 3.95
1300 2638 2.093869 GGAGGCATTGGTACAGTTCGTA 60.094 50.000 0.00 0.00 42.39 3.43
1301 2639 3.431766 GGAGGCATTGGTACAGTTCGTAT 60.432 47.826 0.00 0.00 42.39 3.06
1302 2640 4.202182 GGAGGCATTGGTACAGTTCGTATA 60.202 45.833 0.00 0.00 42.39 1.47
1303 2641 5.510861 GGAGGCATTGGTACAGTTCGTATAT 60.511 44.000 0.00 0.00 42.39 0.86
1304 2642 5.539048 AGGCATTGGTACAGTTCGTATATC 58.461 41.667 0.00 0.00 42.39 1.63
1314 2653 6.525578 ACAGTTCGTATATCTCTGTTGGAA 57.474 37.500 0.00 0.00 36.17 3.53
1351 2691 5.806654 AGTGATTGTAAATTTGTTGCCCT 57.193 34.783 0.00 0.00 0.00 5.19
1352 2692 5.783111 AGTGATTGTAAATTTGTTGCCCTC 58.217 37.500 0.00 0.00 0.00 4.30
1354 2694 4.279671 TGATTGTAAATTTGTTGCCCTCGT 59.720 37.500 0.00 0.00 0.00 4.18
1356 2696 3.971150 TGTAAATTTGTTGCCCTCGTTG 58.029 40.909 0.00 0.00 0.00 4.10
1445 2786 4.820894 ACCTTATCCACGAGCTTAAACT 57.179 40.909 0.00 0.00 0.00 2.66
1449 2790 6.489022 ACCTTATCCACGAGCTTAAACTTTTT 59.511 34.615 0.00 0.00 0.00 1.94
1450 2791 7.021790 CCTTATCCACGAGCTTAAACTTTTTC 58.978 38.462 0.00 0.00 0.00 2.29
1451 2792 7.308348 CCTTATCCACGAGCTTAAACTTTTTCA 60.308 37.037 0.00 0.00 0.00 2.69
1452 2793 6.575162 ATCCACGAGCTTAAACTTTTTCAT 57.425 33.333 0.00 0.00 0.00 2.57
1453 2794 5.997385 TCCACGAGCTTAAACTTTTTCATC 58.003 37.500 0.00 0.00 0.00 2.92
1454 2795 5.529430 TCCACGAGCTTAAACTTTTTCATCA 59.471 36.000 0.00 0.00 0.00 3.07
1456 2797 6.306356 CCACGAGCTTAAACTTTTTCATCATG 59.694 38.462 0.00 0.00 0.00 3.07
1457 2798 6.306356 CACGAGCTTAAACTTTTTCATCATGG 59.694 38.462 0.00 0.00 0.00 3.66
1459 2800 6.863126 CGAGCTTAAACTTTTTCATCATGGTT 59.137 34.615 0.00 0.00 0.00 3.67
1460 2801 7.148918 CGAGCTTAAACTTTTTCATCATGGTTG 60.149 37.037 0.00 0.00 0.00 3.77
1485 2826 4.412796 TGTTGGCAAATGTTTCCATTCA 57.587 36.364 0.00 0.00 40.42 2.57
1486 2827 4.125703 TGTTGGCAAATGTTTCCATTCAC 58.874 39.130 0.00 0.00 40.42 3.18
1489 2830 3.244976 GGCAAATGTTTCCATTCACGAG 58.755 45.455 0.00 0.00 40.42 4.18
1502 2843 4.333649 CCATTCACGAGCTGTTATTGATGT 59.666 41.667 0.00 0.00 0.00 3.06
1527 2868 4.927425 ACTGCATTGCAAGATTTCATGTTC 59.073 37.500 13.18 0.00 38.41 3.18
1528 2869 4.884247 TGCATTGCAAGATTTCATGTTCA 58.116 34.783 9.33 0.00 34.76 3.18
1530 2871 4.201551 GCATTGCAAGATTTCATGTTCACG 60.202 41.667 4.94 0.00 0.00 4.35
1541 2882 0.322816 ATGTTCACGCATTGCCTCCT 60.323 50.000 2.41 0.00 0.00 3.69
1547 2888 0.250901 ACGCATTGCCTCCTTGTCTT 60.251 50.000 2.41 0.00 0.00 3.01
1552 2893 1.967319 TTGCCTCCTTGTCTTGTGAC 58.033 50.000 0.00 0.00 43.20 3.67
1563 2904 2.037641 TGTCTTGTGACTGCTGCATACT 59.962 45.455 1.31 0.00 43.29 2.12
1589 2930 9.887629 TTTGCATATAACCATGTCAAATGAAAT 57.112 25.926 0.00 0.00 32.28 2.17
1590 2931 8.874744 TGCATATAACCATGTCAAATGAAATG 57.125 30.769 6.60 6.60 39.05 2.32
1597 2938 4.885413 CATGTCAAATGAAATGGGTGTGT 58.115 39.130 5.78 0.00 36.38 3.72
1598 2939 5.299148 CATGTCAAATGAAATGGGTGTGTT 58.701 37.500 5.78 0.00 36.38 3.32
1599 2940 4.691175 TGTCAAATGAAATGGGTGTGTTG 58.309 39.130 0.00 0.00 0.00 3.33
1600 2941 4.403752 TGTCAAATGAAATGGGTGTGTTGA 59.596 37.500 0.00 0.00 0.00 3.18
1601 2942 5.070180 TGTCAAATGAAATGGGTGTGTTGAT 59.930 36.000 0.00 0.00 0.00 2.57
1602 2943 6.266330 TGTCAAATGAAATGGGTGTGTTGATA 59.734 34.615 0.00 0.00 0.00 2.15
1603 2944 7.151308 GTCAAATGAAATGGGTGTGTTGATAA 58.849 34.615 0.00 0.00 0.00 1.75
1604 2945 7.329226 GTCAAATGAAATGGGTGTGTTGATAAG 59.671 37.037 0.00 0.00 0.00 1.73
1605 2946 4.782019 TGAAATGGGTGTGTTGATAAGC 57.218 40.909 0.00 0.00 0.00 3.09
1606 2947 4.406456 TGAAATGGGTGTGTTGATAAGCT 58.594 39.130 0.00 0.00 0.00 3.74
1607 2948 4.218200 TGAAATGGGTGTGTTGATAAGCTG 59.782 41.667 0.00 0.00 0.00 4.24
1608 2949 3.719268 ATGGGTGTGTTGATAAGCTGA 57.281 42.857 0.00 0.00 0.00 4.26
1609 2950 3.057969 TGGGTGTGTTGATAAGCTGAG 57.942 47.619 0.00 0.00 0.00 3.35
1610 2951 1.740025 GGGTGTGTTGATAAGCTGAGC 59.260 52.381 0.00 0.00 0.00 4.26
1611 2952 2.616510 GGGTGTGTTGATAAGCTGAGCT 60.617 50.000 0.00 0.00 42.56 4.09
1612 2953 3.369471 GGGTGTGTTGATAAGCTGAGCTA 60.369 47.826 7.68 0.00 38.25 3.32
1613 2954 4.253685 GGTGTGTTGATAAGCTGAGCTAA 58.746 43.478 7.68 0.00 38.25 3.09
1614 2955 4.695455 GGTGTGTTGATAAGCTGAGCTAAA 59.305 41.667 7.68 0.00 38.25 1.85
1615 2956 5.181245 GGTGTGTTGATAAGCTGAGCTAAAA 59.819 40.000 7.68 0.00 38.25 1.52
1616 2957 6.293955 GGTGTGTTGATAAGCTGAGCTAAAAA 60.294 38.462 7.68 0.00 38.25 1.94
1617 2958 7.308435 GTGTGTTGATAAGCTGAGCTAAAAAT 58.692 34.615 7.68 0.00 38.25 1.82
1618 2959 7.809806 GTGTGTTGATAAGCTGAGCTAAAAATT 59.190 33.333 7.68 0.00 38.25 1.82
1619 2960 7.809331 TGTGTTGATAAGCTGAGCTAAAAATTG 59.191 33.333 7.68 0.00 38.25 2.32
1620 2961 8.023128 GTGTTGATAAGCTGAGCTAAAAATTGA 58.977 33.333 7.68 0.00 38.25 2.57
1621 2962 8.742777 TGTTGATAAGCTGAGCTAAAAATTGAT 58.257 29.630 7.68 0.00 38.25 2.57
1624 2965 9.618890 TGATAAGCTGAGCTAAAAATTGATAGT 57.381 29.630 7.68 0.00 38.25 2.12
1628 2969 7.924940 AGCTGAGCTAAAAATTGATAGTAAGC 58.075 34.615 4.49 10.29 36.99 3.09
1629 2970 7.554118 AGCTGAGCTAAAAATTGATAGTAAGCA 59.446 33.333 4.49 0.00 36.99 3.91
1630 2971 8.348507 GCTGAGCTAAAAATTGATAGTAAGCAT 58.651 33.333 0.00 0.00 0.00 3.79
1640 2981 9.595823 AAATTGATAGTAAGCATACAACGTACT 57.404 29.630 1.44 0.00 36.50 2.73
1641 2982 8.798748 ATTGATAGTAAGCATACAACGTACTC 57.201 34.615 1.44 0.00 34.73 2.59
1642 2983 6.732154 TGATAGTAAGCATACAACGTACTCC 58.268 40.000 1.44 0.00 34.73 3.85
1643 2984 4.382345 AGTAAGCATACAACGTACTCCC 57.618 45.455 1.44 0.00 34.29 4.30
1644 2985 4.021916 AGTAAGCATACAACGTACTCCCT 58.978 43.478 1.44 0.00 34.29 4.20
1645 2986 3.521947 AAGCATACAACGTACTCCCTC 57.478 47.619 0.00 0.00 0.00 4.30
1646 2987 2.736347 AGCATACAACGTACTCCCTCT 58.264 47.619 0.00 0.00 0.00 3.69
1647 2988 2.427453 AGCATACAACGTACTCCCTCTG 59.573 50.000 0.00 0.00 0.00 3.35
1648 2989 2.165845 GCATACAACGTACTCCCTCTGT 59.834 50.000 0.00 0.00 0.00 3.41
1649 2990 3.379372 GCATACAACGTACTCCCTCTGTA 59.621 47.826 0.00 0.00 0.00 2.74
1650 2991 4.142315 GCATACAACGTACTCCCTCTGTAA 60.142 45.833 0.00 0.00 0.00 2.41
1651 2992 5.622914 GCATACAACGTACTCCCTCTGTAAA 60.623 44.000 0.00 0.00 0.00 2.01
1652 2993 6.570692 CATACAACGTACTCCCTCTGTAAAT 58.429 40.000 0.00 0.00 0.00 1.40
1653 2994 5.479124 ACAACGTACTCCCTCTGTAAATT 57.521 39.130 0.00 0.00 0.00 1.82
1654 2995 6.594788 ACAACGTACTCCCTCTGTAAATTA 57.405 37.500 0.00 0.00 0.00 1.40
1655 2996 6.996509 ACAACGTACTCCCTCTGTAAATTAA 58.003 36.000 0.00 0.00 0.00 1.40
1656 2997 7.618137 ACAACGTACTCCCTCTGTAAATTAAT 58.382 34.615 0.00 0.00 0.00 1.40
1657 2998 8.752187 ACAACGTACTCCCTCTGTAAATTAATA 58.248 33.333 0.00 0.00 0.00 0.98
1658 2999 9.760077 CAACGTACTCCCTCTGTAAATTAATAT 57.240 33.333 0.00 0.00 0.00 1.28
1665 3006 9.360093 CTCCCTCTGTAAATTAATATAAGAGCG 57.640 37.037 9.98 4.77 0.00 5.03
1666 3007 8.867097 TCCCTCTGTAAATTAATATAAGAGCGT 58.133 33.333 9.98 0.00 0.00 5.07
1667 3008 9.490379 CCCTCTGTAAATTAATATAAGAGCGTT 57.510 33.333 9.98 0.00 0.00 4.84
1685 3026 9.570488 AAGAGCGTTTAGATTACTAAAGTAGTG 57.430 33.333 0.00 0.00 45.42 2.74
1686 3027 8.954350 AGAGCGTTTAGATTACTAAAGTAGTGA 58.046 33.333 0.00 0.00 45.42 3.41
1687 3028 9.733219 GAGCGTTTAGATTACTAAAGTAGTGAT 57.267 33.333 0.00 0.00 45.42 3.06
1688 3029 9.733219 AGCGTTTAGATTACTAAAGTAGTGATC 57.267 33.333 10.62 10.62 46.38 2.92
1696 3037 9.733219 GATTACTAAAGTAGTGATCTAAACGCT 57.267 33.333 11.11 0.00 44.10 5.07
1697 3038 9.733219 ATTACTAAAGTAGTGATCTAAACGCTC 57.267 33.333 0.00 0.00 39.81 5.03
1698 3039 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
1699 3040 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
1700 3041 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
1701 3042 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
1713 3054 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
1714 3055 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
1715 3056 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
1716 3057 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
1717 3058 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
1718 3059 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
1719 3060 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
1720 3061 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
1721 3062 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
1722 3063 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
1730 3071 3.589951 ACGGAGGGAGTACTAAGCATA 57.410 47.619 0.00 0.00 0.00 3.14
1741 3082 6.766944 GGAGTACTAAGCATAGTGACTAGTGA 59.233 42.308 11.79 0.00 42.37 3.41
1742 3083 7.254863 GGAGTACTAAGCATAGTGACTAGTGAC 60.255 44.444 11.79 4.04 42.37 3.67
1749 3090 7.353414 AGCATAGTGACTAGTGACATTATGT 57.647 36.000 15.13 0.00 39.09 2.29
1752 3093 5.344743 AGTGACTAGTGACATTATGTGGG 57.655 43.478 15.13 0.00 0.00 4.61
1758 3099 6.650120 ACTAGTGACATTATGTGGGGTAAAG 58.350 40.000 1.24 0.00 0.00 1.85
1765 3106 5.646360 ACATTATGTGGGGTAAAGTTCTTCG 59.354 40.000 0.00 0.00 0.00 3.79
1766 3107 3.782656 ATGTGGGGTAAAGTTCTTCGT 57.217 42.857 0.00 0.00 0.00 3.85
1781 3122 1.804748 CTTCGTGGGTTCTTGGTTAGC 59.195 52.381 0.00 0.00 0.00 3.09
1782 3123 0.320073 TCGTGGGTTCTTGGTTAGCG 60.320 55.000 0.00 0.00 0.00 4.26
1783 3124 1.873863 GTGGGTTCTTGGTTAGCGC 59.126 57.895 0.00 0.00 0.00 5.92
1788 3153 0.941542 GTTCTTGGTTAGCGCACACA 59.058 50.000 11.47 0.00 0.00 3.72
1791 3156 1.535028 TCTTGGTTAGCGCACACATTG 59.465 47.619 11.47 0.00 0.00 2.82
1803 3168 3.240069 GCACACATTGAGCATTTGACTC 58.760 45.455 0.00 0.00 34.08 3.36
1806 3171 3.058708 ACACATTGAGCATTTGACTCGTG 60.059 43.478 0.00 0.00 36.94 4.35
1808 3173 4.005650 ACATTGAGCATTTGACTCGTGAT 58.994 39.130 0.00 0.00 36.94 3.06
1826 3199 4.475944 GTGATAAATGTTGCTGGTGTGAC 58.524 43.478 0.00 0.00 0.00 3.67
1828 3201 4.455533 TGATAAATGTTGCTGGTGTGACTC 59.544 41.667 0.00 0.00 0.00 3.36
1838 3211 2.614057 CTGGTGTGACTCTGTTTTGGAC 59.386 50.000 0.00 0.00 0.00 4.02
1851 3224 2.674563 TTTGGACGTGGGACTGCTGG 62.675 60.000 0.00 0.00 0.00 4.85
1892 3459 6.149973 TCAACTGAATGCTAAAATGGTCTCTG 59.850 38.462 0.00 0.00 0.00 3.35
1900 3467 6.009589 TGCTAAAATGGTCTCTGGATGAAAA 58.990 36.000 0.00 0.00 0.00 2.29
1913 3480 6.721318 TCTGGATGAAAAGGCTAACTGTATT 58.279 36.000 0.00 0.00 0.00 1.89
1915 3482 8.325787 TCTGGATGAAAAGGCTAACTGTATTTA 58.674 33.333 0.00 0.00 0.00 1.40
1946 3513 8.981659 TGACTCCATCTCATGTATCTTTCTTAA 58.018 33.333 0.00 0.00 0.00 1.85
1983 3550 7.266922 TGTGGTTTCGAAGCTTAGTTTAAAT 57.733 32.000 11.94 0.00 0.00 1.40
1985 3552 9.005777 TGTGGTTTCGAAGCTTAGTTTAAATAT 57.994 29.630 11.94 0.00 0.00 1.28
2019 3586 2.483188 CCCTTAACCTGTCTATCACCGC 60.483 54.545 0.00 0.00 0.00 5.68
2069 3636 3.524095 TGTGGGTTTCTCCATGTCAAT 57.476 42.857 0.00 0.00 39.26 2.57
2071 3638 3.181435 TGTGGGTTTCTCCATGTCAATGA 60.181 43.478 0.00 0.00 39.26 2.57
2098 3665 5.003804 TCTGAATTTTCTCTAACCACCTGC 58.996 41.667 0.00 0.00 0.00 4.85
2210 3784 5.824904 ATAACACCAACAGCATCATTCTC 57.175 39.130 0.00 0.00 0.00 2.87
2254 3828 5.221521 GCCTTTTCTTTCTTGGGACTGATTT 60.222 40.000 0.00 0.00 0.00 2.17
2264 3838 4.919774 TGGGACTGATTTGCTAGGTTTA 57.080 40.909 0.00 0.00 0.00 2.01
2283 3857 5.710567 GGTTTATGGGCTGAGAAAAAGTAGT 59.289 40.000 0.00 0.00 0.00 2.73
2310 4035 5.745227 TCACCAAAACTGATTATCCCTCTC 58.255 41.667 0.00 0.00 0.00 3.20
2400 4125 7.040755 TGACTTCTAATATTGTTGGTGTTGGTG 60.041 37.037 0.00 0.00 0.00 4.17
2422 4147 8.908903 TGGTGAAGTAGATTTTGTGTTACATTT 58.091 29.630 0.00 0.00 0.00 2.32
2523 4258 2.293677 TGTCCATCGTACATGTCTGC 57.706 50.000 0.00 0.00 0.00 4.26
2580 4315 2.051345 GTTTCAAGGGCACGTGCG 60.051 61.111 32.35 19.55 43.26 5.34
2640 4375 7.775053 ATCTCAAGAGAGGATAGTGATAACC 57.225 40.000 5.93 0.00 42.34 2.85
2873 4608 9.288576 CTATAAAGAGGTGGATGATTTGCATAA 57.711 33.333 0.00 0.00 37.34 1.90
2988 4723 7.447238 TCCATGTATCAAGATGTATCTCGTGTA 59.553 37.037 0.00 0.00 35.76 2.90
3043 4778 0.729116 AATTGCAGATCGTCTTGGCG 59.271 50.000 0.00 0.00 0.00 5.69
3150 4885 1.751924 AGTCTGATGGACCGTCTTAGC 59.248 52.381 14.84 3.25 45.54 3.09
3331 5066 1.945387 TTCATCTCATCGGCTTGAGC 58.055 50.000 8.88 0.00 42.37 4.26
3417 5152 1.889545 TGACGATGCATGTTTGACCA 58.110 45.000 2.46 0.00 0.00 4.02
3457 5269 6.036470 GCCCTATCAAATTTAGTTGAAGTGC 58.964 40.000 0.00 0.00 40.76 4.40
3463 5275 6.791303 TCAAATTTAGTTGAAGTGCGAAGTT 58.209 32.000 0.00 0.00 34.59 2.66
3599 5411 9.038072 TGTAGAACTAACACTATTGGGTATCAA 57.962 33.333 0.00 0.00 40.01 2.57
3600 5412 9.310716 GTAGAACTAACACTATTGGGTATCAAC 57.689 37.037 0.00 0.00 38.31 3.18
3696 5508 2.211806 GACTCCTGCAAGCAGATCATC 58.788 52.381 22.76 10.79 46.30 2.92
3813 5625 5.523369 CACAAAGATTCAAGGTTCCACTTC 58.477 41.667 0.00 0.00 0.00 3.01
3858 5670 6.223852 GTTGATTGATATCATGTACCCGACT 58.776 40.000 6.17 0.00 40.37 4.18
3867 5679 2.118732 TACCCGACTGCCCAGACA 59.881 61.111 1.69 0.00 0.00 3.41
3873 5685 0.179100 CGACTGCCCAGACAATCGAT 60.179 55.000 1.69 0.00 0.00 3.59
3984 5796 4.397103 TCATGTTATGCTCTTTTCTGCAGG 59.603 41.667 15.13 0.00 42.74 4.85
3996 5808 1.644509 TCTGCAGGCTTCCTAGTTGA 58.355 50.000 15.13 0.00 29.64 3.18
3997 5809 1.276421 TCTGCAGGCTTCCTAGTTGAC 59.724 52.381 15.13 0.00 29.64 3.18
4003 5815 1.757699 GGCTTCCTAGTTGACCGATCT 59.242 52.381 0.00 0.00 0.00 2.75
4004 5816 2.168728 GGCTTCCTAGTTGACCGATCTT 59.831 50.000 0.00 0.00 0.00 2.40
4050 5862 2.961526 ATGTAGAGCCTGTAACACGG 57.038 50.000 0.00 0.00 0.00 4.94
4138 5951 7.503521 TGTGCTATGTTGATGTCTTGTTTAA 57.496 32.000 0.00 0.00 0.00 1.52
4140 5953 8.575589 TGTGCTATGTTGATGTCTTGTTTAAAT 58.424 29.630 0.00 0.00 0.00 1.40
4141 5954 9.065871 GTGCTATGTTGATGTCTTGTTTAAATC 57.934 33.333 0.00 0.00 0.00 2.17
4164 5977 3.425162 AGTTTCTTGAAGGAGCGGAAT 57.575 42.857 0.00 0.00 0.00 3.01
4168 5981 2.699954 TCTTGAAGGAGCGGAATTGTC 58.300 47.619 0.00 0.00 0.00 3.18
4171 5984 1.623311 TGAAGGAGCGGAATTGTCTGA 59.377 47.619 0.00 0.00 30.94 3.27
4175 5988 1.339151 GGAGCGGAATTGTCTGACCTT 60.339 52.381 5.17 0.00 30.94 3.50
4184 5997 5.292101 GGAATTGTCTGACCTTGATCGTTAG 59.708 44.000 5.17 0.00 0.00 2.34
4186 5999 5.970317 TTGTCTGACCTTGATCGTTAGTA 57.030 39.130 5.17 0.00 0.00 1.82
4187 6000 5.970317 TGTCTGACCTTGATCGTTAGTAA 57.030 39.130 5.17 0.00 0.00 2.24
4211 6024 2.720688 CAGCAGCTGCAAATTGTCG 58.279 52.632 38.24 13.19 45.16 4.35
4247 6060 1.217916 TGGTTTCCTGTCCCAGAACA 58.782 50.000 0.00 0.00 32.44 3.18
4292 6105 4.558226 TCATACTGGTTGCACTGATTCT 57.442 40.909 0.00 0.00 0.00 2.40
4293 6106 4.910195 TCATACTGGTTGCACTGATTCTT 58.090 39.130 0.00 0.00 0.00 2.52
4294 6107 4.696877 TCATACTGGTTGCACTGATTCTTG 59.303 41.667 0.00 0.00 0.00 3.02
4295 6108 1.610522 ACTGGTTGCACTGATTCTTGC 59.389 47.619 0.00 4.43 39.33 4.01
4296 6109 0.592637 TGGTTGCACTGATTCTTGCG 59.407 50.000 0.00 0.00 41.96 4.85
4297 6110 0.730494 GGTTGCACTGATTCTTGCGC 60.730 55.000 0.00 0.00 41.96 6.09
4298 6111 0.239347 GTTGCACTGATTCTTGCGCT 59.761 50.000 9.73 0.00 41.96 5.92
4299 6112 0.239082 TTGCACTGATTCTTGCGCTG 59.761 50.000 9.73 1.08 41.96 5.18
4300 6113 0.603439 TGCACTGATTCTTGCGCTGA 60.603 50.000 9.73 3.98 41.96 4.26
4301 6114 0.731417 GCACTGATTCTTGCGCTGAT 59.269 50.000 9.73 0.00 0.00 2.90
4302 6115 1.131883 GCACTGATTCTTGCGCTGATT 59.868 47.619 9.73 3.50 0.00 2.57
4303 6116 2.790468 GCACTGATTCTTGCGCTGATTC 60.790 50.000 9.73 12.88 0.00 2.52
4310 6123 4.340894 TTCTTGCGCTGATTCAACATAC 57.659 40.909 9.73 0.00 0.00 2.39
4356 6169 9.490379 TTTCTCCTGAAAATAGTAGAAGTTCAC 57.510 33.333 5.50 1.76 39.02 3.18
4382 6195 5.426833 AGCTAGTTTGATCAGGGTATGTTCT 59.573 40.000 0.00 0.00 0.00 3.01
4384 6197 7.125811 AGCTAGTTTGATCAGGGTATGTTCTAA 59.874 37.037 0.00 0.00 0.00 2.10
4385 6198 7.769044 GCTAGTTTGATCAGGGTATGTTCTAAA 59.231 37.037 0.00 0.00 28.58 1.85
4407 6220 0.320946 TTCGACCTAAAAGCCACGGG 60.321 55.000 0.00 0.00 0.00 5.28
4420 6233 1.237285 CCACGGGAAGCTCTGTTTGG 61.237 60.000 0.00 0.00 0.00 3.28
4426 6239 2.488347 GGGAAGCTCTGTTTGGTTGGTA 60.488 50.000 0.00 0.00 0.00 3.25
4440 6253 5.290493 TGGTTGGTATGTAGCCAATCTAG 57.710 43.478 8.53 0.00 46.25 2.43
4443 6256 5.308825 GTTGGTATGTAGCCAATCTAGCAT 58.691 41.667 0.00 0.00 46.25 3.79
4451 6264 3.276857 AGCCAATCTAGCATCACTTGTG 58.723 45.455 0.00 0.00 0.00 3.33
4474 6287 3.006859 GGAAAAGCTGTTGTGGGCTAAAT 59.993 43.478 0.00 0.00 37.87 1.40
4480 6293 2.821969 CTGTTGTGGGCTAAATTCAGCT 59.178 45.455 0.00 0.00 41.50 4.24
4481 6294 4.009675 CTGTTGTGGGCTAAATTCAGCTA 58.990 43.478 0.00 0.00 41.50 3.32
4482 6295 3.756434 TGTTGTGGGCTAAATTCAGCTAC 59.244 43.478 0.00 1.39 41.50 3.58
4483 6296 4.010349 GTTGTGGGCTAAATTCAGCTACT 58.990 43.478 0.00 0.00 41.50 2.57
4484 6297 3.873910 TGTGGGCTAAATTCAGCTACTC 58.126 45.455 0.00 0.00 41.50 2.59
4485 6298 3.206964 GTGGGCTAAATTCAGCTACTCC 58.793 50.000 0.00 0.00 41.50 3.85
4486 6299 2.172717 TGGGCTAAATTCAGCTACTCCC 59.827 50.000 0.00 0.00 41.50 4.30
4487 6300 2.439880 GGGCTAAATTCAGCTACTCCCT 59.560 50.000 0.00 0.00 41.50 4.20
4488 6301 3.495276 GGGCTAAATTCAGCTACTCCCTC 60.495 52.174 0.00 0.00 41.50 4.30
4489 6302 3.495276 GGCTAAATTCAGCTACTCCCTCC 60.495 52.174 0.00 0.00 41.50 4.30
4490 6303 2.990066 AAATTCAGCTACTCCCTCCG 57.010 50.000 0.00 0.00 0.00 4.63
4491 6304 1.867363 AATTCAGCTACTCCCTCCGT 58.133 50.000 0.00 0.00 0.00 4.69
4492 6305 1.867363 ATTCAGCTACTCCCTCCGTT 58.133 50.000 0.00 0.00 0.00 4.44
4493 6306 1.183549 TTCAGCTACTCCCTCCGTTC 58.816 55.000 0.00 0.00 0.00 3.95
4494 6307 0.683504 TCAGCTACTCCCTCCGTTCC 60.684 60.000 0.00 0.00 0.00 3.62
4495 6308 0.684805 CAGCTACTCCCTCCGTTCCT 60.685 60.000 0.00 0.00 0.00 3.36
4496 6309 0.924823 AGCTACTCCCTCCGTTCCTA 59.075 55.000 0.00 0.00 0.00 2.94
4497 6310 1.287146 AGCTACTCCCTCCGTTCCTAA 59.713 52.381 0.00 0.00 0.00 2.69
4498 6311 2.105766 GCTACTCCCTCCGTTCCTAAA 58.894 52.381 0.00 0.00 0.00 1.85
4499 6312 2.699321 GCTACTCCCTCCGTTCCTAAAT 59.301 50.000 0.00 0.00 0.00 1.40
4500 6313 3.893813 GCTACTCCCTCCGTTCCTAAATA 59.106 47.826 0.00 0.00 0.00 1.40
4501 6314 4.527427 GCTACTCCCTCCGTTCCTAAATAT 59.473 45.833 0.00 0.00 0.00 1.28
4502 6315 5.713861 GCTACTCCCTCCGTTCCTAAATATA 59.286 44.000 0.00 0.00 0.00 0.86
4503 6316 6.210185 GCTACTCCCTCCGTTCCTAAATATAA 59.790 42.308 0.00 0.00 0.00 0.98
4504 6317 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
4505 6318 6.379579 ACTCCCTCCGTTCCTAAATATAAGA 58.620 40.000 0.00 0.00 0.00 2.10
4506 6319 6.267242 ACTCCCTCCGTTCCTAAATATAAGAC 59.733 42.308 0.00 0.00 0.00 3.01
4507 6320 6.138263 TCCCTCCGTTCCTAAATATAAGACA 58.862 40.000 0.00 0.00 0.00 3.41
4508 6321 6.785963 TCCCTCCGTTCCTAAATATAAGACAT 59.214 38.462 0.00 0.00 0.00 3.06
4509 6322 7.291651 TCCCTCCGTTCCTAAATATAAGACATT 59.708 37.037 0.00 0.00 0.00 2.71
4510 6323 7.937394 CCCTCCGTTCCTAAATATAAGACATTT 59.063 37.037 0.00 0.00 0.00 2.32
4511 6324 8.774586 CCTCCGTTCCTAAATATAAGACATTTG 58.225 37.037 0.00 0.00 0.00 2.32
4512 6325 9.542462 CTCCGTTCCTAAATATAAGACATTTGA 57.458 33.333 0.00 0.00 0.00 2.69
4513 6326 9.542462 TCCGTTCCTAAATATAAGACATTTGAG 57.458 33.333 0.00 0.00 0.00 3.02
4514 6327 9.542462 CCGTTCCTAAATATAAGACATTTGAGA 57.458 33.333 0.00 0.00 0.00 3.27
4539 6352 9.798885 GATTTCAATATTGACTACATACGAAGC 57.201 33.333 17.76 5.57 36.83 3.86
4540 6353 8.710835 TTTCAATATTGACTACATACGAAGCA 57.289 30.769 17.76 0.00 36.83 3.91
4541 6354 8.710835 TTCAATATTGACTACATACGAAGCAA 57.289 30.769 17.76 0.00 36.83 3.91
4542 6355 8.710835 TCAATATTGACTACATACGAAGCAAA 57.289 30.769 14.23 0.00 31.01 3.68
4543 6356 9.157104 TCAATATTGACTACATACGAAGCAAAA 57.843 29.630 14.23 0.00 31.01 2.44
4544 6357 9.935682 CAATATTGACTACATACGAAGCAAAAT 57.064 29.630 10.04 0.00 0.00 1.82
4545 6358 9.935682 AATATTGACTACATACGAAGCAAAATG 57.064 29.630 0.00 0.00 0.00 2.32
4546 6359 6.795098 TTGACTACATACGAAGCAAAATGT 57.205 33.333 0.00 0.00 36.56 2.71
4547 6360 6.164408 TGACTACATACGAAGCAAAATGTG 57.836 37.500 0.00 0.00 34.54 3.21
4548 6361 5.699001 TGACTACATACGAAGCAAAATGTGT 59.301 36.000 0.00 0.00 34.54 3.72
4549 6362 5.927030 ACTACATACGAAGCAAAATGTGTG 58.073 37.500 0.00 0.00 34.54 3.82
4550 6363 5.699001 ACTACATACGAAGCAAAATGTGTGA 59.301 36.000 0.00 0.00 34.54 3.58
4551 6364 5.431420 ACATACGAAGCAAAATGTGTGAA 57.569 34.783 0.00 0.00 31.56 3.18
4552 6365 6.012658 ACATACGAAGCAAAATGTGTGAAT 57.987 33.333 0.00 0.00 31.56 2.57
4553 6366 6.086222 ACATACGAAGCAAAATGTGTGAATC 58.914 36.000 0.00 0.00 31.56 2.52
4554 6367 4.836125 ACGAAGCAAAATGTGTGAATCT 57.164 36.364 0.00 0.00 0.00 2.40
4555 6368 5.940192 ACGAAGCAAAATGTGTGAATCTA 57.060 34.783 0.00 0.00 0.00 1.98
4556 6369 5.689819 ACGAAGCAAAATGTGTGAATCTAC 58.310 37.500 0.00 0.00 0.00 2.59
4557 6370 5.238432 ACGAAGCAAAATGTGTGAATCTACA 59.762 36.000 0.00 0.00 0.00 2.74
4613 6426 9.785982 AGTCTATATTGAAATCTCTAAAAGGGC 57.214 33.333 0.00 0.00 0.00 5.19
4614 6427 9.785982 GTCTATATTGAAATCTCTAAAAGGGCT 57.214 33.333 0.00 0.00 0.00 5.19
4632 6445 8.753497 AAAGGGCTTATATTTAGAAACAGAGG 57.247 34.615 0.00 0.00 0.00 3.69
4633 6446 7.691993 AGGGCTTATATTTAGAAACAGAGGA 57.308 36.000 0.00 0.00 0.00 3.71
4634 6447 7.740805 AGGGCTTATATTTAGAAACAGAGGAG 58.259 38.462 0.00 0.00 0.00 3.69
4635 6448 7.348537 AGGGCTTATATTTAGAAACAGAGGAGT 59.651 37.037 0.00 0.00 0.00 3.85
4636 6449 7.442666 GGGCTTATATTTAGAAACAGAGGAGTG 59.557 40.741 0.00 0.00 0.00 3.51
4648 6461 3.144506 CAGAGGAGTGCAAAACAGACAT 58.855 45.455 0.00 0.00 0.00 3.06
4678 6491 4.201753 GCATGTGTCAGTAGCAATACAGTG 60.202 45.833 0.00 0.00 0.00 3.66
4697 6510 2.012237 CAGTAGCTGCAGATTGCCG 58.988 57.895 20.43 0.00 44.23 5.69
4710 6523 0.611618 ATTGCCGGCCAATTCAGTGA 60.612 50.000 26.77 0.00 41.29 3.41
4719 6532 2.159421 GCCAATTCAGTGAGCATCTGTG 60.159 50.000 0.00 0.00 34.92 3.66
4723 6536 5.332707 CAATTCAGTGAGCATCTGTGATTG 58.667 41.667 0.00 13.47 34.75 2.67
4728 6541 3.504906 AGTGAGCATCTGTGATTGGTTTG 59.495 43.478 0.00 0.00 34.92 2.93
4730 6543 3.503363 TGAGCATCTGTGATTGGTTTGTC 59.497 43.478 0.00 0.00 34.92 3.18
4812 7092 2.777692 ACTGGTCTTCCTGGTTGAGAAA 59.222 45.455 0.00 0.00 37.05 2.52
4846 7126 4.736126 AAAAAGTTGGTCTTCCTGGTTG 57.264 40.909 0.00 0.00 35.02 3.77
4847 7127 3.662759 AAAGTTGGTCTTCCTGGTTGA 57.337 42.857 0.00 0.00 35.02 3.18
4848 7128 2.938956 AGTTGGTCTTCCTGGTTGAG 57.061 50.000 0.00 0.00 34.23 3.02
4849 7129 2.408565 AGTTGGTCTTCCTGGTTGAGA 58.591 47.619 0.00 0.00 34.23 3.27
4850 7130 2.777692 AGTTGGTCTTCCTGGTTGAGAA 59.222 45.455 0.00 0.00 34.23 2.87
4851 7131 3.202151 AGTTGGTCTTCCTGGTTGAGAAA 59.798 43.478 0.00 0.00 34.23 2.52
4852 7132 3.943671 TGGTCTTCCTGGTTGAGAAAA 57.056 42.857 0.00 0.00 34.23 2.29
4853 7133 4.243793 TGGTCTTCCTGGTTGAGAAAAA 57.756 40.909 0.00 0.00 34.23 1.94
4888 7168 7.875327 AAAAAGTTGGTCTTTACTCTTAGCA 57.125 32.000 0.00 0.00 44.50 3.49
4889 7169 7.497925 AAAAGTTGGTCTTTACTCTTAGCAG 57.502 36.000 0.00 0.00 44.50 4.24
4890 7170 4.570930 AGTTGGTCTTTACTCTTAGCAGC 58.429 43.478 0.00 0.00 0.00 5.25
4891 7171 3.611766 TGGTCTTTACTCTTAGCAGCC 57.388 47.619 0.00 0.00 0.00 4.85
4892 7172 3.173965 TGGTCTTTACTCTTAGCAGCCT 58.826 45.455 0.00 0.00 0.00 4.58
4893 7173 4.350245 TGGTCTTTACTCTTAGCAGCCTA 58.650 43.478 0.00 0.00 0.00 3.93
4894 7174 4.159879 TGGTCTTTACTCTTAGCAGCCTAC 59.840 45.833 0.00 0.00 0.00 3.18
4895 7175 4.403113 GGTCTTTACTCTTAGCAGCCTACT 59.597 45.833 0.00 0.00 0.00 2.57
4896 7176 5.593502 GGTCTTTACTCTTAGCAGCCTACTA 59.406 44.000 0.00 0.00 0.00 1.82
4897 7177 6.459985 GGTCTTTACTCTTAGCAGCCTACTAC 60.460 46.154 0.00 0.00 0.00 2.73
4898 7178 6.095160 GTCTTTACTCTTAGCAGCCTACTACA 59.905 42.308 0.00 0.00 0.00 2.74
4899 7179 6.834451 TCTTTACTCTTAGCAGCCTACTACAT 59.166 38.462 0.00 0.00 0.00 2.29
4900 7180 7.997223 TCTTTACTCTTAGCAGCCTACTACATA 59.003 37.037 0.00 0.00 0.00 2.29
4901 7181 7.507733 TTACTCTTAGCAGCCTACTACATAC 57.492 40.000 0.00 0.00 0.00 2.39
4902 7182 5.446860 ACTCTTAGCAGCCTACTACATACA 58.553 41.667 0.00 0.00 0.00 2.29
4903 7183 5.299782 ACTCTTAGCAGCCTACTACATACAC 59.700 44.000 0.00 0.00 0.00 2.90
4904 7184 4.583489 TCTTAGCAGCCTACTACATACACC 59.417 45.833 0.00 0.00 0.00 4.16
4905 7185 3.033659 AGCAGCCTACTACATACACCT 57.966 47.619 0.00 0.00 0.00 4.00
4906 7186 2.959707 AGCAGCCTACTACATACACCTC 59.040 50.000 0.00 0.00 0.00 3.85
4907 7187 2.287668 GCAGCCTACTACATACACCTCG 60.288 54.545 0.00 0.00 0.00 4.63
4908 7188 1.955080 AGCCTACTACATACACCTCGC 59.045 52.381 0.00 0.00 0.00 5.03
4909 7189 1.679680 GCCTACTACATACACCTCGCA 59.320 52.381 0.00 0.00 0.00 5.10
4910 7190 2.287668 GCCTACTACATACACCTCGCAG 60.288 54.545 0.00 0.00 0.00 5.18
4911 7191 2.287668 CCTACTACATACACCTCGCAGC 60.288 54.545 0.00 0.00 0.00 5.25
4912 7192 0.460311 ACTACATACACCTCGCAGCC 59.540 55.000 0.00 0.00 0.00 4.85
4913 7193 0.249489 CTACATACACCTCGCAGCCC 60.249 60.000 0.00 0.00 0.00 5.19
4914 7194 1.682451 TACATACACCTCGCAGCCCC 61.682 60.000 0.00 0.00 0.00 5.80
4915 7195 3.480133 ATACACCTCGCAGCCCCC 61.480 66.667 0.00 0.00 0.00 5.40
4918 7198 2.882403 TACACCTCGCAGCCCCCATA 62.882 60.000 0.00 0.00 0.00 2.74
4919 7199 2.690881 ACCTCGCAGCCCCCATAA 60.691 61.111 0.00 0.00 0.00 1.90
4920 7200 2.203209 CCTCGCAGCCCCCATAAC 60.203 66.667 0.00 0.00 0.00 1.89
4921 7201 2.746375 CCTCGCAGCCCCCATAACT 61.746 63.158 0.00 0.00 0.00 2.24
4922 7202 1.227674 CTCGCAGCCCCCATAACTC 60.228 63.158 0.00 0.00 0.00 3.01
4923 7203 1.971505 CTCGCAGCCCCCATAACTCA 61.972 60.000 0.00 0.00 0.00 3.41
4924 7204 1.149174 CGCAGCCCCCATAACTCAT 59.851 57.895 0.00 0.00 0.00 2.90
4925 7205 0.886490 CGCAGCCCCCATAACTCATC 60.886 60.000 0.00 0.00 0.00 2.92
4926 7206 0.475906 GCAGCCCCCATAACTCATCT 59.524 55.000 0.00 0.00 0.00 2.90
4927 7207 1.816961 GCAGCCCCCATAACTCATCTG 60.817 57.143 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.610379 ATGCTTTGAAGGGGGCCAC 60.610 57.895 4.39 0.00 0.00 5.01
16 17 1.325476 GGGGCTCATGCTTTGAAGGG 61.325 60.000 0.00 0.00 39.59 3.95
55 56 1.228398 TGGAACATTCGGCTGCCAA 60.228 52.632 20.29 12.33 0.00 4.52
70 71 0.035598 TTGGAGACGCCGAAAATGGA 59.964 50.000 0.00 0.00 40.66 3.41
287 288 0.319641 GGATAAGACGATGACCCGGC 60.320 60.000 0.00 0.00 37.97 6.13
298 299 2.286872 TCACGACTCCTCGGATAAGAC 58.713 52.381 0.00 0.00 44.80 3.01
332 333 1.909700 GACAGAAAGTCCATGCCCAA 58.090 50.000 0.00 0.00 41.56 4.12
361 362 3.995506 ATCCCCGGCGCTCCTTTTG 62.996 63.158 7.64 0.00 0.00 2.44
629 632 4.395854 TGTAGATTGTGTAGGCAATGCAAG 59.604 41.667 7.79 0.00 38.98 4.01
641 645 5.221048 GCTGTTTTCTTGGTGTAGATTGTGT 60.221 40.000 0.00 0.00 0.00 3.72
717 722 9.638176 AAAATGAGGCAAATCTCTGTATTAGAT 57.362 29.630 0.00 0.00 35.17 1.98
745 750 6.993079 TCAACTGCATCTCTGTACTAGAAAA 58.007 36.000 0.00 0.00 34.32 2.29
746 751 6.209589 ACTCAACTGCATCTCTGTACTAGAAA 59.790 38.462 0.00 0.00 34.32 2.52
748 753 5.257262 ACTCAACTGCATCTCTGTACTAGA 58.743 41.667 0.00 0.00 0.00 2.43
749 754 5.574891 ACTCAACTGCATCTCTGTACTAG 57.425 43.478 0.00 0.00 0.00 2.57
750 755 5.984695 AACTCAACTGCATCTCTGTACTA 57.015 39.130 0.00 0.00 0.00 1.82
751 756 4.881019 AACTCAACTGCATCTCTGTACT 57.119 40.909 0.00 0.00 0.00 2.73
752 757 4.991056 TGAAACTCAACTGCATCTCTGTAC 59.009 41.667 0.00 0.00 0.00 2.90
753 758 5.213891 TGAAACTCAACTGCATCTCTGTA 57.786 39.130 0.00 0.00 0.00 2.74
754 759 4.077300 TGAAACTCAACTGCATCTCTGT 57.923 40.909 0.00 0.00 0.00 3.41
756 761 3.501445 GCTTGAAACTCAACTGCATCTCT 59.499 43.478 0.00 0.00 32.21 3.10
757 762 3.251729 TGCTTGAAACTCAACTGCATCTC 59.748 43.478 0.00 0.00 34.15 2.75
758 763 3.216800 TGCTTGAAACTCAACTGCATCT 58.783 40.909 0.00 0.00 34.15 2.90
760 765 3.216800 TCTGCTTGAAACTCAACTGCAT 58.783 40.909 4.41 0.00 37.08 3.96
762 767 3.698029 TTCTGCTTGAAACTCAACTGC 57.302 42.857 0.00 0.00 32.21 4.40
763 768 6.358030 CGTATTTTCTGCTTGAAACTCAACTG 59.642 38.462 5.24 0.00 43.55 3.16
764 769 6.430451 CGTATTTTCTGCTTGAAACTCAACT 58.570 36.000 5.24 0.00 43.55 3.16
773 2059 3.410631 TCACCCGTATTTTCTGCTTGA 57.589 42.857 0.00 0.00 0.00 3.02
782 2068 2.820787 TGGCGATTTTTCACCCGTATTT 59.179 40.909 0.00 0.00 0.00 1.40
788 2074 0.894835 ACCATGGCGATTTTTCACCC 59.105 50.000 13.04 0.00 0.00 4.61
791 2077 3.311486 GGAAACCATGGCGATTTTTCA 57.689 42.857 20.37 0.00 0.00 2.69
810 2096 1.066215 GGCTTTAGCATGTTTTGGGGG 60.066 52.381 3.88 0.00 44.36 5.40
811 2097 1.404047 CGGCTTTAGCATGTTTTGGGG 60.404 52.381 3.88 0.00 44.36 4.96
814 2100 2.030363 TGTCCGGCTTTAGCATGTTTTG 60.030 45.455 0.00 0.00 44.36 2.44
815 2101 2.235016 TGTCCGGCTTTAGCATGTTTT 58.765 42.857 0.00 0.00 44.36 2.43
816 2102 1.904287 TGTCCGGCTTTAGCATGTTT 58.096 45.000 0.00 0.00 44.36 2.83
817 2103 1.539827 GTTGTCCGGCTTTAGCATGTT 59.460 47.619 0.00 0.00 44.36 2.71
818 2104 1.165270 GTTGTCCGGCTTTAGCATGT 58.835 50.000 0.00 0.00 44.36 3.21
819 2105 1.131126 CAGTTGTCCGGCTTTAGCATG 59.869 52.381 0.00 0.00 44.36 4.06
820 2106 1.271379 ACAGTTGTCCGGCTTTAGCAT 60.271 47.619 0.00 0.00 44.36 3.79
821 2107 0.107831 ACAGTTGTCCGGCTTTAGCA 59.892 50.000 0.00 0.00 44.36 3.49
822 2108 1.069227 CAACAGTTGTCCGGCTTTAGC 60.069 52.381 4.99 0.00 41.14 3.09
823 2109 2.489971 TCAACAGTTGTCCGGCTTTAG 58.510 47.619 13.14 0.00 0.00 1.85
824 2110 2.623878 TCAACAGTTGTCCGGCTTTA 57.376 45.000 13.14 0.00 0.00 1.85
825 2111 1.676006 CTTCAACAGTTGTCCGGCTTT 59.324 47.619 13.14 0.00 0.00 3.51
826 2112 1.308998 CTTCAACAGTTGTCCGGCTT 58.691 50.000 13.14 0.00 0.00 4.35
827 2113 0.180406 ACTTCAACAGTTGTCCGGCT 59.820 50.000 13.14 0.00 27.32 5.52
828 2114 0.307760 CACTTCAACAGTTGTCCGGC 59.692 55.000 13.14 0.00 30.92 6.13
829 2115 1.663695 ACACTTCAACAGTTGTCCGG 58.336 50.000 13.14 0.00 30.92 5.14
830 2116 4.868450 TTTACACTTCAACAGTTGTCCG 57.132 40.909 13.14 5.61 30.92 4.79
831 2117 6.199393 GTGATTTACACTTCAACAGTTGTCC 58.801 40.000 13.14 0.00 45.13 4.02
846 2132 9.605275 TTCAAATTTGTCCAATTGTGATTTACA 57.395 25.926 17.47 0.00 35.09 2.41
850 2157 6.711645 CCCTTCAAATTTGTCCAATTGTGATT 59.288 34.615 17.47 0.00 35.09 2.57
857 2164 2.305635 GGGCCCTTCAAATTTGTCCAAT 59.694 45.455 17.04 0.00 0.00 3.16
861 2168 3.138304 GTTTGGGCCCTTCAAATTTGTC 58.862 45.455 25.70 0.00 36.64 3.18
875 2182 2.623718 GCGTTTTTGCGTTTGGGC 59.376 55.556 0.00 0.00 0.00 5.36
948 2255 4.761058 AGAGCGGCGAGGGAAGGA 62.761 66.667 12.98 0.00 0.00 3.36
949 2256 4.214327 GAGAGCGGCGAGGGAAGG 62.214 72.222 12.98 0.00 0.00 3.46
950 2257 4.214327 GGAGAGCGGCGAGGGAAG 62.214 72.222 12.98 0.00 0.00 3.46
1032 2345 2.726351 GCGGTGGAGGAAGAGGAGG 61.726 68.421 0.00 0.00 0.00 4.30
1204 2523 7.838812 GTTTCACAACACATATACGCGAAAGC 61.839 42.308 15.93 0.00 42.74 3.51
1205 2524 4.833469 TCACAACACATATACGCGAAAG 57.167 40.909 15.93 0.00 0.00 2.62
1206 2525 5.177881 AGTTTCACAACACATATACGCGAAA 59.822 36.000 15.93 0.00 35.05 3.46
1207 2526 4.687018 AGTTTCACAACACATATACGCGAA 59.313 37.500 15.93 0.00 35.05 4.70
1217 2549 5.124617 TGCAATCTACAAGTTTCACAACACA 59.875 36.000 0.00 0.00 35.05 3.72
1224 2556 7.443879 TGTCTACAATGCAATCTACAAGTTTCA 59.556 33.333 0.00 0.00 0.00 2.69
1235 2567 5.063944 ACGAGAACATGTCTACAATGCAATC 59.936 40.000 0.00 0.00 36.41 2.67
1237 2569 4.314961 ACGAGAACATGTCTACAATGCAA 58.685 39.130 0.00 0.00 36.41 4.08
1250 2582 1.000506 ACACGCCAGTAACGAGAACAT 59.999 47.619 0.00 0.00 0.00 2.71
1277 2610 2.359900 GAACTGTACCAATGCCTCCAG 58.640 52.381 0.00 0.00 0.00 3.86
1324 2664 7.173047 GGGCAACAAATTTACAATCACTTGAAT 59.827 33.333 0.00 0.00 35.43 2.57
1325 2665 6.481644 GGGCAACAAATTTACAATCACTTGAA 59.518 34.615 0.00 0.00 35.43 2.69
1326 2666 5.988561 GGGCAACAAATTTACAATCACTTGA 59.011 36.000 0.00 0.00 35.43 3.02
1327 2667 5.990996 AGGGCAACAAATTTACAATCACTTG 59.009 36.000 0.00 0.00 36.94 3.16
1328 2668 6.173427 AGGGCAACAAATTTACAATCACTT 57.827 33.333 0.00 0.00 39.74 3.16
1331 2671 4.279671 ACGAGGGCAACAAATTTACAATCA 59.720 37.500 0.00 0.00 39.74 2.57
1340 2680 3.535280 AAAACAACGAGGGCAACAAAT 57.465 38.095 0.00 0.00 39.74 2.32
1342 2682 2.231478 TGAAAAACAACGAGGGCAACAA 59.769 40.909 0.00 0.00 39.74 2.83
1344 2684 2.459934 CTGAAAAACAACGAGGGCAAC 58.540 47.619 0.00 0.00 0.00 4.17
1345 2685 1.407258 CCTGAAAAACAACGAGGGCAA 59.593 47.619 0.00 0.00 0.00 4.52
1351 2691 3.082548 TCACCAACCTGAAAAACAACGA 58.917 40.909 0.00 0.00 0.00 3.85
1352 2692 3.434637 CTCACCAACCTGAAAAACAACG 58.565 45.455 0.00 0.00 0.00 4.10
1354 2694 2.763448 CCCTCACCAACCTGAAAAACAA 59.237 45.455 0.00 0.00 0.00 2.83
1356 2696 1.686587 CCCCTCACCAACCTGAAAAAC 59.313 52.381 0.00 0.00 0.00 2.43
1445 2786 6.426328 GCCAACATAACAACCATGATGAAAAA 59.574 34.615 0.00 0.00 30.15 1.94
1449 2790 4.085009 TGCCAACATAACAACCATGATGA 58.915 39.130 0.00 0.00 30.15 2.92
1450 2791 4.453177 TGCCAACATAACAACCATGATG 57.547 40.909 0.00 0.00 0.00 3.07
1451 2792 5.480642 TTTGCCAACATAACAACCATGAT 57.519 34.783 0.00 0.00 0.00 2.45
1452 2793 4.944619 TTTGCCAACATAACAACCATGA 57.055 36.364 0.00 0.00 0.00 3.07
1453 2794 4.996122 ACATTTGCCAACATAACAACCATG 59.004 37.500 0.00 0.00 0.00 3.66
1454 2795 5.226194 ACATTTGCCAACATAACAACCAT 57.774 34.783 0.00 0.00 0.00 3.55
1456 2797 5.049749 GGAAACATTTGCCAACATAACAACC 60.050 40.000 0.00 0.00 0.00 3.77
1457 2798 5.525378 TGGAAACATTTGCCAACATAACAAC 59.475 36.000 0.00 0.00 33.40 3.32
1459 2800 5.282055 TGGAAACATTTGCCAACATAACA 57.718 34.783 0.00 0.00 33.40 2.41
1485 2826 3.928992 CAGTCACATCAATAACAGCTCGT 59.071 43.478 0.00 0.00 0.00 4.18
1486 2827 3.242220 GCAGTCACATCAATAACAGCTCG 60.242 47.826 0.00 0.00 0.00 5.03
1489 2830 4.627611 ATGCAGTCACATCAATAACAGC 57.372 40.909 0.00 0.00 0.00 4.40
1502 2843 4.021807 ACATGAAATCTTGCAATGCAGTCA 60.022 37.500 8.31 8.76 40.61 3.41
1527 2868 0.957395 AGACAAGGAGGCAATGCGTG 60.957 55.000 4.75 0.00 34.92 5.34
1528 2869 0.250901 AAGACAAGGAGGCAATGCGT 60.251 50.000 0.00 0.00 0.00 5.24
1530 2871 1.068055 CACAAGACAAGGAGGCAATGC 60.068 52.381 0.00 0.00 0.00 3.56
1563 2904 9.887629 ATTTCATTTGACATGGTTATATGCAAA 57.112 25.926 0.00 0.00 37.87 3.68
1571 2912 5.541868 ACACCCATTTCATTTGACATGGTTA 59.458 36.000 19.35 0.00 46.05 2.85
1589 2930 2.875672 GCTCAGCTTATCAACACACCCA 60.876 50.000 0.00 0.00 0.00 4.51
1590 2931 1.740025 GCTCAGCTTATCAACACACCC 59.260 52.381 0.00 0.00 0.00 4.61
1591 2932 2.704572 AGCTCAGCTTATCAACACACC 58.295 47.619 0.00 0.00 33.89 4.16
1593 2934 6.875948 TTTTTAGCTCAGCTTATCAACACA 57.124 33.333 3.31 0.00 40.44 3.72
1594 2935 8.023128 TCAATTTTTAGCTCAGCTTATCAACAC 58.977 33.333 3.31 0.00 40.44 3.32
1595 2936 8.109705 TCAATTTTTAGCTCAGCTTATCAACA 57.890 30.769 3.31 0.00 40.44 3.33
1598 2939 9.618890 ACTATCAATTTTTAGCTCAGCTTATCA 57.381 29.630 3.31 0.00 40.44 2.15
1602 2943 8.401709 GCTTACTATCAATTTTTAGCTCAGCTT 58.598 33.333 3.31 0.00 40.44 3.74
1603 2944 7.554118 TGCTTACTATCAATTTTTAGCTCAGCT 59.446 33.333 3.60 3.60 43.41 4.24
1604 2945 7.697691 TGCTTACTATCAATTTTTAGCTCAGC 58.302 34.615 0.00 0.00 0.00 4.26
1614 2955 9.595823 AGTACGTTGTATGCTTACTATCAATTT 57.404 29.630 10.74 0.00 0.00 1.82
1615 2956 9.245962 GAGTACGTTGTATGCTTACTATCAATT 57.754 33.333 10.74 0.00 0.00 2.32
1616 2957 7.866393 GGAGTACGTTGTATGCTTACTATCAAT 59.134 37.037 10.74 0.00 0.00 2.57
1617 2958 7.198390 GGAGTACGTTGTATGCTTACTATCAA 58.802 38.462 10.74 0.00 0.00 2.57
1618 2959 6.238842 GGGAGTACGTTGTATGCTTACTATCA 60.239 42.308 10.74 0.00 0.00 2.15
1619 2960 6.016443 AGGGAGTACGTTGTATGCTTACTATC 60.016 42.308 10.74 0.00 0.00 2.08
1620 2961 5.832060 AGGGAGTACGTTGTATGCTTACTAT 59.168 40.000 10.74 0.00 0.00 2.12
1621 2962 5.195940 AGGGAGTACGTTGTATGCTTACTA 58.804 41.667 10.74 0.93 0.00 1.82
1622 2963 4.021916 AGGGAGTACGTTGTATGCTTACT 58.978 43.478 10.74 0.00 0.00 2.24
1623 2964 4.097589 AGAGGGAGTACGTTGTATGCTTAC 59.902 45.833 0.00 2.86 0.00 2.34
1624 2965 4.097437 CAGAGGGAGTACGTTGTATGCTTA 59.903 45.833 0.00 0.00 0.00 3.09
1625 2966 3.097614 AGAGGGAGTACGTTGTATGCTT 58.902 45.455 0.00 0.00 0.00 3.91
1626 2967 2.427453 CAGAGGGAGTACGTTGTATGCT 59.573 50.000 0.00 0.00 0.00 3.79
1627 2968 2.165845 ACAGAGGGAGTACGTTGTATGC 59.834 50.000 0.00 0.00 0.00 3.14
1628 2969 5.571784 TTACAGAGGGAGTACGTTGTATG 57.428 43.478 0.00 0.00 0.00 2.39
1629 2970 6.786967 ATTTACAGAGGGAGTACGTTGTAT 57.213 37.500 0.00 0.00 0.00 2.29
1630 2971 6.594788 AATTTACAGAGGGAGTACGTTGTA 57.405 37.500 0.00 0.00 0.00 2.41
1631 2972 5.479124 AATTTACAGAGGGAGTACGTTGT 57.521 39.130 0.00 0.00 0.00 3.32
1632 2973 9.760077 ATATTAATTTACAGAGGGAGTACGTTG 57.240 33.333 0.00 0.00 0.00 4.10
1639 2980 9.360093 CGCTCTTATATTAATTTACAGAGGGAG 57.640 37.037 20.74 5.24 40.49 4.30
1640 2981 8.867097 ACGCTCTTATATTAATTTACAGAGGGA 58.133 33.333 25.54 1.67 40.49 4.20
1641 2982 9.490379 AACGCTCTTATATTAATTTACAGAGGG 57.510 33.333 21.96 21.96 42.53 4.30
1659 3000 9.570488 CACTACTTTAGTAATCTAAACGCTCTT 57.430 33.333 0.00 0.00 40.05 2.85
1660 3001 8.954350 TCACTACTTTAGTAATCTAAACGCTCT 58.046 33.333 0.00 0.00 40.05 4.09
1661 3002 9.733219 ATCACTACTTTAGTAATCTAAACGCTC 57.267 33.333 0.00 0.00 40.05 5.03
1662 3003 9.733219 GATCACTACTTTAGTAATCTAAACGCT 57.267 33.333 0.00 0.00 40.05 5.07
1663 3004 9.733219 AGATCACTACTTTAGTAATCTAAACGC 57.267 33.333 0.00 0.00 40.05 4.84
1669 3010 9.733219 GCGTTTAGATCACTACTTTAGTAATCT 57.267 33.333 4.72 4.72 37.23 2.40
1670 3011 9.733219 AGCGTTTAGATCACTACTTTAGTAATC 57.267 33.333 0.00 0.00 37.23 1.75
1671 3012 9.733219 GAGCGTTTAGATCACTACTTTAGTAAT 57.267 33.333 0.00 0.00 37.23 1.89
1672 3013 8.954350 AGAGCGTTTAGATCACTACTTTAGTAA 58.046 33.333 0.00 0.00 37.82 2.24
1673 3014 8.503458 AGAGCGTTTAGATCACTACTTTAGTA 57.497 34.615 0.00 0.00 37.82 1.82
1674 3015 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
1675 3016 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
1687 3028 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
1688 3029 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
1689 3030 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
1690 3031 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
1691 3032 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
1692 3033 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
1693 3034 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
1694 3035 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
1695 3036 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
1696 3037 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
1697 3038 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
1700 3041 9.294614 CTTAGTACTCCCTCCGTAAACTAATAT 57.705 37.037 0.00 0.00 0.00 1.28
1701 3042 7.229506 GCTTAGTACTCCCTCCGTAAACTAATA 59.770 40.741 0.00 0.00 0.00 0.98
1702 3043 6.040278 GCTTAGTACTCCCTCCGTAAACTAAT 59.960 42.308 0.00 0.00 0.00 1.73
1703 3044 5.358160 GCTTAGTACTCCCTCCGTAAACTAA 59.642 44.000 0.00 0.00 0.00 2.24
1704 3045 4.884164 GCTTAGTACTCCCTCCGTAAACTA 59.116 45.833 0.00 0.00 0.00 2.24
1705 3046 3.698539 GCTTAGTACTCCCTCCGTAAACT 59.301 47.826 0.00 0.00 0.00 2.66
1706 3047 3.445096 TGCTTAGTACTCCCTCCGTAAAC 59.555 47.826 0.00 0.00 0.00 2.01
1707 3048 3.700538 TGCTTAGTACTCCCTCCGTAAA 58.299 45.455 0.00 0.00 0.00 2.01
1708 3049 3.370840 TGCTTAGTACTCCCTCCGTAA 57.629 47.619 0.00 0.00 0.00 3.18
1709 3050 3.589951 ATGCTTAGTACTCCCTCCGTA 57.410 47.619 0.00 0.00 0.00 4.02
1710 3051 2.456073 ATGCTTAGTACTCCCTCCGT 57.544 50.000 0.00 0.00 0.00 4.69
1711 3052 3.253677 CACTATGCTTAGTACTCCCTCCG 59.746 52.174 11.60 0.00 36.50 4.63
1712 3053 4.278919 GTCACTATGCTTAGTACTCCCTCC 59.721 50.000 11.60 0.00 36.50 4.30
1713 3054 5.134661 AGTCACTATGCTTAGTACTCCCTC 58.865 45.833 11.60 0.00 36.50 4.30
1714 3055 5.132043 AGTCACTATGCTTAGTACTCCCT 57.868 43.478 11.60 2.19 36.50 4.20
1715 3056 6.016943 CACTAGTCACTATGCTTAGTACTCCC 60.017 46.154 11.60 0.00 36.50 4.30
1716 3057 6.766944 TCACTAGTCACTATGCTTAGTACTCC 59.233 42.308 11.60 1.71 36.50 3.85
1717 3058 7.280428 TGTCACTAGTCACTATGCTTAGTACTC 59.720 40.741 11.60 6.09 36.50 2.59
1718 3059 7.110810 TGTCACTAGTCACTATGCTTAGTACT 58.889 38.462 11.60 15.42 36.50 2.73
1719 3060 7.317842 TGTCACTAGTCACTATGCTTAGTAC 57.682 40.000 11.60 10.28 36.50 2.73
1720 3061 8.521170 AATGTCACTAGTCACTATGCTTAGTA 57.479 34.615 11.60 0.00 36.50 1.82
1721 3062 7.411486 AATGTCACTAGTCACTATGCTTAGT 57.589 36.000 6.46 6.46 39.30 2.24
1722 3063 9.404348 CATAATGTCACTAGTCACTATGCTTAG 57.596 37.037 0.00 5.13 0.00 2.18
1730 3071 4.162320 CCCCACATAATGTCACTAGTCACT 59.838 45.833 0.00 0.00 0.00 3.41
1741 3082 5.646360 CGAAGAACTTTACCCCACATAATGT 59.354 40.000 0.00 0.00 0.00 2.71
1742 3083 5.646360 ACGAAGAACTTTACCCCACATAATG 59.354 40.000 0.00 0.00 0.00 1.90
1749 3090 1.072648 CCCACGAAGAACTTTACCCCA 59.927 52.381 0.00 0.00 0.00 4.96
1752 3093 3.736720 AGAACCCACGAAGAACTTTACC 58.263 45.455 0.00 0.00 0.00 2.85
1758 3099 1.963172 ACCAAGAACCCACGAAGAAC 58.037 50.000 0.00 0.00 0.00 3.01
1765 3106 0.887387 TGCGCTAACCAAGAACCCAC 60.887 55.000 9.73 0.00 0.00 4.61
1766 3107 0.887387 GTGCGCTAACCAAGAACCCA 60.887 55.000 9.73 0.00 0.00 4.51
1781 3122 1.980844 GTCAAATGCTCAATGTGTGCG 59.019 47.619 0.00 0.00 39.51 5.34
1782 3123 3.240069 GAGTCAAATGCTCAATGTGTGC 58.760 45.455 0.00 0.00 37.38 4.57
1783 3124 3.058708 ACGAGTCAAATGCTCAATGTGTG 60.059 43.478 0.00 0.00 33.45 3.82
1788 3153 6.741992 TTTATCACGAGTCAAATGCTCAAT 57.258 33.333 0.00 0.00 33.45 2.57
1791 3156 6.111768 ACATTTATCACGAGTCAAATGCTC 57.888 37.500 15.76 0.00 40.43 4.26
1803 3168 3.188254 TCACACCAGCAACATTTATCACG 59.812 43.478 0.00 0.00 0.00 4.35
1806 3171 4.697352 AGAGTCACACCAGCAACATTTATC 59.303 41.667 0.00 0.00 0.00 1.75
1808 3173 3.814842 CAGAGTCACACCAGCAACATTTA 59.185 43.478 0.00 0.00 0.00 1.40
1826 3199 1.202651 AGTCCCACGTCCAAAACAGAG 60.203 52.381 0.00 0.00 0.00 3.35
1828 3201 0.944386 CAGTCCCACGTCCAAAACAG 59.056 55.000 0.00 0.00 0.00 3.16
1838 3211 1.669115 CTTCACCAGCAGTCCCACG 60.669 63.158 0.00 0.00 0.00 4.94
1851 3224 4.816385 TCAGTTGAACATGGAAGACTTCAC 59.184 41.667 16.85 7.06 0.00 3.18
1892 3459 8.188799 GGTTAAATACAGTTAGCCTTTTCATCC 58.811 37.037 0.00 0.00 32.99 3.51
1900 3467 6.958767 AGTCATGGTTAAATACAGTTAGCCT 58.041 36.000 4.37 0.00 35.84 4.58
1946 3513 2.579410 AACCACAAGGCCGACTATTT 57.421 45.000 0.00 0.00 39.06 1.40
1983 3550 5.007682 GGTTAAGGGCACAACTGAAGAATA 58.992 41.667 0.00 0.00 0.00 1.75
1985 3552 3.117663 AGGTTAAGGGCACAACTGAAGAA 60.118 43.478 0.00 0.00 0.00 2.52
1987 3554 2.554032 CAGGTTAAGGGCACAACTGAAG 59.446 50.000 0.00 0.00 0.00 3.02
2069 3636 7.607991 GGTGGTTAGAGAAAATTCAGAAGATCA 59.392 37.037 0.00 0.00 0.00 2.92
2071 3638 7.609532 CAGGTGGTTAGAGAAAATTCAGAAGAT 59.390 37.037 0.00 0.00 0.00 2.40
2210 3784 2.541762 GCAATAAGAGCTAACCGCAGAG 59.458 50.000 0.00 0.00 42.61 3.35
2254 3828 2.477245 TCTCAGCCCATAAACCTAGCA 58.523 47.619 0.00 0.00 0.00 3.49
2264 3838 4.917906 AGACTACTTTTTCTCAGCCCAT 57.082 40.909 0.00 0.00 0.00 4.00
2283 3857 7.348274 AGAGGGATAATCAGTTTTGGTGATAGA 59.652 37.037 0.00 0.00 33.34 1.98
2310 4035 6.243900 AGCAACCATCCATAGATTATTCCTG 58.756 40.000 0.00 0.00 0.00 3.86
2400 4125 9.744468 AACCAAATGTAACACAAAATCTACTTC 57.256 29.630 0.00 0.00 0.00 3.01
2422 4147 5.435686 AATCACTGGCAGATTACTAACCA 57.564 39.130 23.66 0.00 34.14 3.67
2523 4258 1.596954 GCACCAAACAGTAACTGCACG 60.597 52.381 0.00 0.00 34.37 5.34
2580 4315 2.049063 AAGGACGAGTGCGACTGC 60.049 61.111 0.00 0.00 41.64 4.40
2640 4375 4.697514 TGAGTTTCTCTCCAGAACTGTTG 58.302 43.478 0.00 0.00 42.12 3.33
2873 4608 7.178274 TGTGTTCCTTAAAATGCTGGATTACAT 59.822 33.333 0.00 0.00 0.00 2.29
2988 4723 5.132502 TCAAATCTGCCCGATATGTTGATT 58.867 37.500 0.00 0.00 27.11 2.57
3043 4778 9.793259 TTGATTTATCCTTTCCATATAGTCACC 57.207 33.333 0.00 0.00 0.00 4.02
3237 4972 8.443176 TATTTATGAAATTCCAGAGCATCCTCT 58.557 33.333 0.00 0.00 39.33 3.69
3331 5066 8.761575 ACAAATTTCATTACAATGTTAGCCAG 57.238 30.769 0.00 0.00 37.65 4.85
3365 5100 3.181470 TGTTCCAACATCGTTCTGTCAGA 60.181 43.478 0.00 0.00 33.17 3.27
3417 5152 6.767456 TGATAGGGCAATCACAAAAACATTT 58.233 32.000 0.00 0.00 30.92 2.32
3457 5269 2.589014 GCCAGAAGCATGAAAACTTCG 58.411 47.619 0.00 0.00 45.56 3.79
3481 5293 5.957132 AGGTATGATGGAAATACAGCCAAT 58.043 37.500 0.00 0.00 37.78 3.16
3485 5297 7.217200 TGACTAAGGTATGATGGAAATACAGC 58.783 38.462 0.00 0.00 33.05 4.40
3486 5298 9.046296 GTTGACTAAGGTATGATGGAAATACAG 57.954 37.037 0.00 0.00 33.05 2.74
3599 5411 3.328505 GCCAGCTGCAAACATAAAATGT 58.671 40.909 8.66 0.00 42.44 2.71
3624 5436 5.816258 CAGCTTGATTCTGATCTTCTGCTTA 59.184 40.000 0.00 0.00 33.54 3.09
3696 5508 3.878086 TTAGTTGTCTTTGCAGCTTCG 57.122 42.857 0.00 0.00 32.33 3.79
3813 5625 1.139734 CTGGTGTGTCCGGATCTCG 59.860 63.158 7.81 0.00 45.09 4.04
3858 5670 2.684374 CAATGAATCGATTGTCTGGGCA 59.316 45.455 16.96 5.62 0.00 5.36
3867 5679 3.252701 GGAGCTGCATCAATGAATCGATT 59.747 43.478 11.20 11.20 0.00 3.34
3873 5685 1.100510 GCTGGAGCTGCATCAATGAA 58.899 50.000 8.91 0.00 38.21 2.57
3912 5724 4.298626 AGTGGGATCATAGCTTAACCTCA 58.701 43.478 0.00 0.00 0.00 3.86
3967 5779 2.795231 AGCCTGCAGAAAAGAGCATA 57.205 45.000 17.39 0.00 40.42 3.14
3984 5796 3.528597 AAGATCGGTCAACTAGGAAGC 57.471 47.619 0.00 0.00 0.00 3.86
4138 5951 4.938226 CCGCTCCTTCAAGAAACTTAGATT 59.062 41.667 0.00 0.00 0.00 2.40
4140 5953 3.576982 TCCGCTCCTTCAAGAAACTTAGA 59.423 43.478 0.00 0.00 0.00 2.10
4141 5954 3.926616 TCCGCTCCTTCAAGAAACTTAG 58.073 45.455 0.00 0.00 0.00 2.18
4143 5956 2.930826 TCCGCTCCTTCAAGAAACTT 57.069 45.000 0.00 0.00 0.00 2.66
4164 5977 4.866508 ACTAACGATCAAGGTCAGACAA 57.133 40.909 2.17 0.00 0.00 3.18
4168 5981 5.573282 CACTGTTACTAACGATCAAGGTCAG 59.427 44.000 0.00 0.00 0.00 3.51
4171 5984 4.243270 GCACTGTTACTAACGATCAAGGT 58.757 43.478 0.00 0.00 0.00 3.50
4175 5988 3.250744 GCTGCACTGTTACTAACGATCA 58.749 45.455 0.00 0.00 0.00 2.92
4247 6060 5.393068 TGGGGCAATTTCTAGATGAATCT 57.607 39.130 0.00 0.00 40.86 2.40
4257 6070 3.962718 CCAGTATGAATGGGGCAATTTCT 59.037 43.478 0.00 0.00 39.69 2.52
4292 6105 4.329801 CAGTAGTATGTTGAATCAGCGCAA 59.670 41.667 11.47 0.00 0.00 4.85
4293 6106 3.865164 CAGTAGTATGTTGAATCAGCGCA 59.135 43.478 11.47 0.00 0.00 6.09
4294 6107 3.246226 CCAGTAGTATGTTGAATCAGCGC 59.754 47.826 0.00 0.00 0.00 5.92
4295 6108 3.246226 GCCAGTAGTATGTTGAATCAGCG 59.754 47.826 0.00 0.00 0.00 5.18
4296 6109 4.191544 TGCCAGTAGTATGTTGAATCAGC 58.808 43.478 0.00 0.00 0.00 4.26
4297 6110 6.676456 GCTTTGCCAGTAGTATGTTGAATCAG 60.676 42.308 0.00 0.00 0.00 2.90
4298 6111 5.123820 GCTTTGCCAGTAGTATGTTGAATCA 59.876 40.000 0.00 0.00 0.00 2.57
4299 6112 5.355350 AGCTTTGCCAGTAGTATGTTGAATC 59.645 40.000 0.00 0.00 0.00 2.52
4300 6113 5.256474 AGCTTTGCCAGTAGTATGTTGAAT 58.744 37.500 0.00 0.00 0.00 2.57
4301 6114 4.651778 AGCTTTGCCAGTAGTATGTTGAA 58.348 39.130 0.00 0.00 0.00 2.69
4302 6115 4.286297 AGCTTTGCCAGTAGTATGTTGA 57.714 40.909 0.00 0.00 0.00 3.18
4303 6116 5.182001 AGAAAGCTTTGCCAGTAGTATGTTG 59.818 40.000 18.30 0.00 0.00 3.33
4310 6123 5.182760 AGAAATCAGAAAGCTTTGCCAGTAG 59.817 40.000 18.30 0.00 0.00 2.57
4354 6167 3.679389 ACCCTGATCAAACTAGCTTGTG 58.321 45.455 0.36 0.00 0.00 3.33
4355 6168 5.045578 ACATACCCTGATCAAACTAGCTTGT 60.046 40.000 5.80 0.00 0.00 3.16
4356 6169 5.431765 ACATACCCTGATCAAACTAGCTTG 58.568 41.667 0.00 0.00 0.00 4.01
4382 6195 4.211794 CGTGGCTTTTAGGTCGAAACTTTA 59.788 41.667 0.00 0.00 0.00 1.85
4384 6197 2.546789 CGTGGCTTTTAGGTCGAAACTT 59.453 45.455 0.00 0.00 0.00 2.66
4385 6198 2.140717 CGTGGCTTTTAGGTCGAAACT 58.859 47.619 0.00 0.00 0.00 2.66
4407 6220 3.821033 ACATACCAACCAAACAGAGCTTC 59.179 43.478 0.00 0.00 0.00 3.86
4426 6239 4.970860 AGTGATGCTAGATTGGCTACAT 57.029 40.909 0.00 0.00 0.00 2.29
4440 6253 1.615392 AGCTTTTCCCACAAGTGATGC 59.385 47.619 0.94 0.00 0.00 3.91
4443 6256 2.426738 CAACAGCTTTTCCCACAAGTGA 59.573 45.455 0.94 0.00 0.00 3.41
4451 6264 1.115326 AGCCCACAACAGCTTTTCCC 61.115 55.000 0.00 0.00 35.22 3.97
4474 6287 1.183549 GAACGGAGGGAGTAGCTGAA 58.816 55.000 0.00 0.00 0.00 3.02
4480 6293 7.449704 GTCTTATATTTAGGAACGGAGGGAGTA 59.550 40.741 0.00 0.00 0.00 2.59
4481 6294 6.267242 GTCTTATATTTAGGAACGGAGGGAGT 59.733 42.308 0.00 0.00 0.00 3.85
4482 6295 6.267014 TGTCTTATATTTAGGAACGGAGGGAG 59.733 42.308 0.00 0.00 0.00 4.30
4483 6296 6.138263 TGTCTTATATTTAGGAACGGAGGGA 58.862 40.000 0.00 0.00 0.00 4.20
4484 6297 6.415206 TGTCTTATATTTAGGAACGGAGGG 57.585 41.667 0.00 0.00 0.00 4.30
4485 6298 8.774586 CAAATGTCTTATATTTAGGAACGGAGG 58.225 37.037 0.00 0.00 0.00 4.30
4486 6299 9.542462 TCAAATGTCTTATATTTAGGAACGGAG 57.458 33.333 0.00 0.00 0.00 4.63
4487 6300 9.542462 CTCAAATGTCTTATATTTAGGAACGGA 57.458 33.333 0.00 0.00 0.00 4.69
4488 6301 9.542462 TCTCAAATGTCTTATATTTAGGAACGG 57.458 33.333 0.00 0.00 0.00 4.44
4513 6326 9.798885 GCTTCGTATGTAGTCAATATTGAAATC 57.201 33.333 19.55 12.42 39.21 2.17
4514 6327 9.325198 TGCTTCGTATGTAGTCAATATTGAAAT 57.675 29.630 19.55 13.50 39.21 2.17
4515 6328 8.710835 TGCTTCGTATGTAGTCAATATTGAAA 57.289 30.769 19.55 8.52 39.21 2.69
4516 6329 8.710835 TTGCTTCGTATGTAGTCAATATTGAA 57.289 30.769 19.55 4.90 39.21 2.69
4517 6330 8.710835 TTTGCTTCGTATGTAGTCAATATTGA 57.289 30.769 14.23 14.23 34.20 2.57
4518 6331 9.935682 ATTTTGCTTCGTATGTAGTCAATATTG 57.064 29.630 9.29 9.29 0.00 1.90
4519 6332 9.935682 CATTTTGCTTCGTATGTAGTCAATATT 57.064 29.630 0.00 0.00 0.00 1.28
4520 6333 9.109393 ACATTTTGCTTCGTATGTAGTCAATAT 57.891 29.630 0.00 0.00 29.93 1.28
4521 6334 8.387354 CACATTTTGCTTCGTATGTAGTCAATA 58.613 33.333 0.00 0.00 30.53 1.90
4522 6335 7.094805 ACACATTTTGCTTCGTATGTAGTCAAT 60.095 33.333 0.00 0.00 30.53 2.57
4523 6336 6.203915 ACACATTTTGCTTCGTATGTAGTCAA 59.796 34.615 0.00 0.00 30.53 3.18
4524 6337 5.699001 ACACATTTTGCTTCGTATGTAGTCA 59.301 36.000 0.00 0.00 30.53 3.41
4525 6338 6.015504 CACACATTTTGCTTCGTATGTAGTC 58.984 40.000 0.00 0.00 30.53 2.59
4526 6339 5.699001 TCACACATTTTGCTTCGTATGTAGT 59.301 36.000 0.00 0.00 30.53 2.73
4527 6340 6.164408 TCACACATTTTGCTTCGTATGTAG 57.836 37.500 0.00 0.00 30.53 2.74
4528 6341 6.546972 TTCACACATTTTGCTTCGTATGTA 57.453 33.333 0.00 0.00 30.53 2.29
4529 6342 5.431420 TTCACACATTTTGCTTCGTATGT 57.569 34.783 0.00 0.00 0.00 2.29
4530 6343 6.317088 AGATTCACACATTTTGCTTCGTATG 58.683 36.000 0.00 0.00 0.00 2.39
4531 6344 6.500684 AGATTCACACATTTTGCTTCGTAT 57.499 33.333 0.00 0.00 0.00 3.06
4532 6345 5.940192 AGATTCACACATTTTGCTTCGTA 57.060 34.783 0.00 0.00 0.00 3.43
4533 6346 4.836125 AGATTCACACATTTTGCTTCGT 57.164 36.364 0.00 0.00 0.00 3.85
4534 6347 5.565259 GTGTAGATTCACACATTTTGCTTCG 59.435 40.000 11.87 0.00 46.55 3.79
4535 6348 6.918043 GTGTAGATTCACACATTTTGCTTC 57.082 37.500 11.87 0.00 46.55 3.86
4587 6400 9.785982 GCCCTTTTAGAGATTTCAATATAGACT 57.214 33.333 0.00 0.00 0.00 3.24
4588 6401 9.785982 AGCCCTTTTAGAGATTTCAATATAGAC 57.214 33.333 0.00 0.00 0.00 2.59
4606 6419 9.190317 CCTCTGTTTCTAAATATAAGCCCTTTT 57.810 33.333 0.00 0.00 0.00 2.27
4607 6420 8.557450 TCCTCTGTTTCTAAATATAAGCCCTTT 58.443 33.333 0.00 0.00 0.00 3.11
4608 6421 8.102484 TCCTCTGTTTCTAAATATAAGCCCTT 57.898 34.615 0.00 0.00 0.00 3.95
4609 6422 7.348537 ACTCCTCTGTTTCTAAATATAAGCCCT 59.651 37.037 0.00 0.00 0.00 5.19
4610 6423 7.442666 CACTCCTCTGTTTCTAAATATAAGCCC 59.557 40.741 0.00 0.00 0.00 5.19
4611 6424 7.041712 GCACTCCTCTGTTTCTAAATATAAGCC 60.042 40.741 0.00 0.00 0.00 4.35
4612 6425 7.495934 TGCACTCCTCTGTTTCTAAATATAAGC 59.504 37.037 0.00 0.00 0.00 3.09
4613 6426 8.948631 TGCACTCCTCTGTTTCTAAATATAAG 57.051 34.615 0.00 0.00 0.00 1.73
4614 6427 9.733556 TTTGCACTCCTCTGTTTCTAAATATAA 57.266 29.630 0.00 0.00 0.00 0.98
4615 6428 9.733556 TTTTGCACTCCTCTGTTTCTAAATATA 57.266 29.630 0.00 0.00 0.00 0.86
4616 6429 8.515414 GTTTTGCACTCCTCTGTTTCTAAATAT 58.485 33.333 0.00 0.00 0.00 1.28
4617 6430 7.500892 TGTTTTGCACTCCTCTGTTTCTAAATA 59.499 33.333 0.00 0.00 0.00 1.40
4618 6431 6.321181 TGTTTTGCACTCCTCTGTTTCTAAAT 59.679 34.615 0.00 0.00 0.00 1.40
4619 6432 5.650266 TGTTTTGCACTCCTCTGTTTCTAAA 59.350 36.000 0.00 0.00 0.00 1.85
4620 6433 5.189928 TGTTTTGCACTCCTCTGTTTCTAA 58.810 37.500 0.00 0.00 0.00 2.10
4621 6434 4.776349 TGTTTTGCACTCCTCTGTTTCTA 58.224 39.130 0.00 0.00 0.00 2.10
4622 6435 3.620488 TGTTTTGCACTCCTCTGTTTCT 58.380 40.909 0.00 0.00 0.00 2.52
4623 6436 3.627577 TCTGTTTTGCACTCCTCTGTTTC 59.372 43.478 0.00 0.00 0.00 2.78
4624 6437 3.378427 GTCTGTTTTGCACTCCTCTGTTT 59.622 43.478 0.00 0.00 0.00 2.83
4625 6438 2.945668 GTCTGTTTTGCACTCCTCTGTT 59.054 45.455 0.00 0.00 0.00 3.16
4626 6439 2.092968 TGTCTGTTTTGCACTCCTCTGT 60.093 45.455 0.00 0.00 0.00 3.41
4627 6440 2.564771 TGTCTGTTTTGCACTCCTCTG 58.435 47.619 0.00 0.00 0.00 3.35
4628 6441 3.498774 ATGTCTGTTTTGCACTCCTCT 57.501 42.857 0.00 0.00 0.00 3.69
4629 6442 3.565482 TGAATGTCTGTTTTGCACTCCTC 59.435 43.478 0.00 0.00 0.00 3.71
4630 6443 3.316308 GTGAATGTCTGTTTTGCACTCCT 59.684 43.478 0.00 0.00 0.00 3.69
4631 6444 3.066621 TGTGAATGTCTGTTTTGCACTCC 59.933 43.478 0.00 0.00 0.00 3.85
4632 6445 4.285292 CTGTGAATGTCTGTTTTGCACTC 58.715 43.478 0.00 0.00 0.00 3.51
4633 6446 3.067180 CCTGTGAATGTCTGTTTTGCACT 59.933 43.478 0.00 0.00 0.00 4.40
4634 6447 3.374745 CCTGTGAATGTCTGTTTTGCAC 58.625 45.455 0.00 0.00 0.00 4.57
4635 6448 2.223782 GCCTGTGAATGTCTGTTTTGCA 60.224 45.455 0.00 0.00 0.00 4.08
4636 6449 2.223782 TGCCTGTGAATGTCTGTTTTGC 60.224 45.455 0.00 0.00 0.00 3.68
4687 6500 1.227060 GAATTGGCCGGCAATCTGC 60.227 57.895 30.85 10.31 44.08 4.26
4697 6510 1.404391 CAGATGCTCACTGAATTGGCC 59.596 52.381 0.00 0.00 37.54 5.36
4700 6513 5.332707 CAATCACAGATGCTCACTGAATTG 58.667 41.667 11.04 13.49 38.55 2.32
4710 6523 2.821969 GGACAAACCAATCACAGATGCT 59.178 45.455 0.00 0.00 38.79 3.79
4739 6552 4.813161 CCGTGAGATCAAATAACAGATGCT 59.187 41.667 0.00 0.00 0.00 3.79
4829 7109 2.408565 TCTCAACCAGGAAGACCAACT 58.591 47.619 0.00 0.00 38.94 3.16
4830 7110 2.930826 TCTCAACCAGGAAGACCAAC 57.069 50.000 0.00 0.00 38.94 3.77
4832 7112 3.943671 TTTTCTCAACCAGGAAGACCA 57.056 42.857 0.00 0.00 38.94 4.02
4864 7144 7.468768 GCTGCTAAGAGTAAAGACCAACTTTTT 60.469 37.037 0.00 0.00 45.22 1.94
4865 7145 6.017026 GCTGCTAAGAGTAAAGACCAACTTTT 60.017 38.462 0.00 0.00 45.22 2.27
4867 7147 4.998033 GCTGCTAAGAGTAAAGACCAACTT 59.002 41.667 0.00 0.00 40.98 2.66
4868 7148 4.563786 GGCTGCTAAGAGTAAAGACCAACT 60.564 45.833 0.00 0.00 0.00 3.16
4869 7149 3.685272 GGCTGCTAAGAGTAAAGACCAAC 59.315 47.826 0.00 0.00 0.00 3.77
4870 7150 3.583086 AGGCTGCTAAGAGTAAAGACCAA 59.417 43.478 0.00 0.00 0.00 3.67
4871 7151 3.173965 AGGCTGCTAAGAGTAAAGACCA 58.826 45.455 0.00 0.00 0.00 4.02
4872 7152 3.897141 AGGCTGCTAAGAGTAAAGACC 57.103 47.619 0.00 0.00 0.00 3.85
4873 7153 5.585820 AGTAGGCTGCTAAGAGTAAAGAC 57.414 43.478 2.25 0.00 0.00 3.01
4874 7154 6.185511 TGTAGTAGGCTGCTAAGAGTAAAGA 58.814 40.000 14.12 0.00 0.00 2.52
4875 7155 6.452494 TGTAGTAGGCTGCTAAGAGTAAAG 57.548 41.667 14.12 0.00 0.00 1.85
4876 7156 7.558807 TGTATGTAGTAGGCTGCTAAGAGTAAA 59.441 37.037 14.12 0.00 0.00 2.01
4877 7157 7.013083 GTGTATGTAGTAGGCTGCTAAGAGTAA 59.987 40.741 14.12 0.00 0.00 2.24
4878 7158 6.485984 GTGTATGTAGTAGGCTGCTAAGAGTA 59.514 42.308 14.12 2.83 0.00 2.59
4879 7159 5.299782 GTGTATGTAGTAGGCTGCTAAGAGT 59.700 44.000 14.12 3.71 0.00 3.24
4880 7160 5.278561 GGTGTATGTAGTAGGCTGCTAAGAG 60.279 48.000 14.12 0.00 0.00 2.85
4881 7161 4.583489 GGTGTATGTAGTAGGCTGCTAAGA 59.417 45.833 14.12 4.61 0.00 2.10
4882 7162 4.585162 AGGTGTATGTAGTAGGCTGCTAAG 59.415 45.833 14.12 0.00 0.00 2.18
4883 7163 4.543689 AGGTGTATGTAGTAGGCTGCTAA 58.456 43.478 14.12 5.57 0.00 3.09
4884 7164 4.142790 GAGGTGTATGTAGTAGGCTGCTA 58.857 47.826 8.34 8.34 0.00 3.49
4885 7165 2.959707 GAGGTGTATGTAGTAGGCTGCT 59.040 50.000 10.69 10.69 0.00 4.24
4886 7166 2.287668 CGAGGTGTATGTAGTAGGCTGC 60.288 54.545 0.00 0.00 0.00 5.25
4887 7167 2.287668 GCGAGGTGTATGTAGTAGGCTG 60.288 54.545 0.00 0.00 0.00 4.85
4888 7168 1.955080 GCGAGGTGTATGTAGTAGGCT 59.045 52.381 0.00 0.00 0.00 4.58
4889 7169 1.679680 TGCGAGGTGTATGTAGTAGGC 59.320 52.381 0.00 0.00 0.00 3.93
4890 7170 2.287668 GCTGCGAGGTGTATGTAGTAGG 60.288 54.545 0.00 0.00 0.00 3.18
4891 7171 2.287668 GGCTGCGAGGTGTATGTAGTAG 60.288 54.545 0.00 0.00 0.00 2.57
4892 7172 1.679680 GGCTGCGAGGTGTATGTAGTA 59.320 52.381 0.00 0.00 0.00 1.82
4893 7173 0.460311 GGCTGCGAGGTGTATGTAGT 59.540 55.000 0.00 0.00 0.00 2.73
4894 7174 0.249489 GGGCTGCGAGGTGTATGTAG 60.249 60.000 0.00 0.00 0.00 2.74
4895 7175 1.682451 GGGGCTGCGAGGTGTATGTA 61.682 60.000 0.00 0.00 0.00 2.29
4896 7176 2.584608 GGGCTGCGAGGTGTATGT 59.415 61.111 0.00 0.00 0.00 2.29
4897 7177 2.203070 GGGGCTGCGAGGTGTATG 60.203 66.667 0.00 0.00 0.00 2.39
4898 7178 3.480133 GGGGGCTGCGAGGTGTAT 61.480 66.667 0.00 0.00 0.00 2.29
4899 7179 2.882403 TATGGGGGCTGCGAGGTGTA 62.882 60.000 0.00 0.00 0.00 2.90
4901 7181 3.042733 TTATGGGGGCTGCGAGGTG 62.043 63.158 0.00 0.00 0.00 4.00
4902 7182 2.690881 TTATGGGGGCTGCGAGGT 60.691 61.111 0.00 0.00 0.00 3.85
4903 7183 2.203209 GTTATGGGGGCTGCGAGG 60.203 66.667 0.00 0.00 0.00 4.63
4904 7184 1.227674 GAGTTATGGGGGCTGCGAG 60.228 63.158 0.00 0.00 0.00 5.03
4905 7185 1.344953 ATGAGTTATGGGGGCTGCGA 61.345 55.000 0.00 0.00 0.00 5.10
4906 7186 0.886490 GATGAGTTATGGGGGCTGCG 60.886 60.000 0.00 0.00 0.00 5.18
4907 7187 0.475906 AGATGAGTTATGGGGGCTGC 59.524 55.000 0.00 0.00 0.00 5.25
4908 7188 2.267174 CAGATGAGTTATGGGGGCTG 57.733 55.000 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.