Multiple sequence alignment - TraesCS4A01G042400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G042400 chr4A 100.000 7613 0 0 1 7613 35617957 35625569 0.000000e+00 14059.0
1 TraesCS4A01G042400 chr4A 85.008 607 65 12 3542 4128 35620101 35620701 1.830000e-165 593.0
2 TraesCS4A01G042400 chr4A 85.008 607 65 12 2145 2745 35621498 35622084 1.830000e-165 593.0
3 TraesCS4A01G042400 chr4A 90.169 356 25 8 2767 3114 35619727 35620080 9.010000e-124 455.0
4 TraesCS4A01G042400 chr4A 90.169 356 25 8 1771 2124 35620723 35621070 9.010000e-124 455.0
5 TraesCS4A01G042400 chr4A 97.500 40 1 0 5426 5465 719682588 719682627 1.370000e-07 69.4
6 TraesCS4A01G042400 chr4D 93.665 2052 74 25 720 2744 434268047 434270069 0.000000e+00 3018.0
7 TraesCS4A01G042400 chr4D 93.617 1457 80 6 5463 6918 434271392 434272836 0.000000e+00 2163.0
8 TraesCS4A01G042400 chr4D 85.924 1023 92 22 3542 4519 434269456 434270471 0.000000e+00 1044.0
9 TraesCS4A01G042400 chr4D 88.488 886 65 12 4512 5374 434270516 434271387 0.000000e+00 1037.0
10 TraesCS4A01G042400 chr4D 88.285 589 38 18 7046 7613 434272998 434273576 0.000000e+00 676.0
11 TraesCS4A01G042400 chr4D 94.895 333 11 2 1 330 434267470 434267799 4.070000e-142 516.0
12 TraesCS4A01G042400 chr4D 89.859 355 28 6 2767 3114 434269082 434269435 4.190000e-122 449.0
13 TraesCS4A01G042400 chr4B 95.650 1724 55 7 1025 2744 533492014 533493721 0.000000e+00 2750.0
14 TraesCS4A01G042400 chr4B 93.831 1459 81 5 5463 6918 533495064 533496516 0.000000e+00 2187.0
15 TraesCS4A01G042400 chr4B 86.086 999 100 20 3542 4510 533493124 533494113 0.000000e+00 1038.0
16 TraesCS4A01G042400 chr4B 87.726 774 54 11 4512 5263 533494161 533494915 0.000000e+00 865.0
17 TraesCS4A01G042400 chr4B 100.000 365 0 0 3128 3492 37693483 37693119 0.000000e+00 675.0
18 TraesCS4A01G042400 chr4B 99.200 375 1 1 3127 3499 609476412 609476038 0.000000e+00 675.0
19 TraesCS4A01G042400 chr4B 99.727 366 1 0 3128 3493 306604318 306604683 0.000000e+00 671.0
20 TraesCS4A01G042400 chr4B 84.271 693 58 28 6954 7613 533497833 533498507 5.010000e-176 628.0
21 TraesCS4A01G042400 chr4B 94.395 339 10 3 1 330 533491003 533491341 5.270000e-141 512.0
22 TraesCS4A01G042400 chr4B 88.701 354 28 7 2767 3114 533492756 533493103 9.130000e-114 422.0
23 TraesCS4A01G042400 chr4B 97.500 40 1 0 5426 5465 345463504 345463465 1.370000e-07 69.4
24 TraesCS4A01G042400 chr5A 99.728 367 1 0 3127 3493 603008080 603008446 0.000000e+00 673.0
25 TraesCS4A01G042400 chr3B 99.458 369 2 0 3129 3497 81529076 81528708 0.000000e+00 671.0
26 TraesCS4A01G042400 chr3B 92.188 64 5 0 5401 5464 263784945 263785008 2.930000e-14 91.6
27 TraesCS4A01G042400 chr3A 99.727 366 1 0 3127 3492 319968446 319968811 0.000000e+00 671.0
28 TraesCS4A01G042400 chr1A 99.727 366 1 0 3127 3492 487492103 487491738 0.000000e+00 671.0
29 TraesCS4A01G042400 chr1A 99.726 365 1 0 3128 3492 45800211 45799847 0.000000e+00 669.0
30 TraesCS4A01G042400 chr6B 99.726 365 1 0 3128 3492 27061997 27062361 0.000000e+00 669.0
31 TraesCS4A01G042400 chr6B 95.455 44 2 0 2157 2200 42397825 42397782 3.810000e-08 71.3
32 TraesCS4A01G042400 chr6B 95.000 40 2 0 5426 5465 216569644 216569605 6.380000e-06 63.9
33 TraesCS4A01G042400 chr7D 90.805 87 8 0 5378 5464 242790577 242790663 4.830000e-22 117.0
34 TraesCS4A01G042400 chr7A 90.698 86 8 0 5379 5464 571702623 571702538 1.740000e-21 115.0
35 TraesCS4A01G042400 chr6D 89.888 89 9 0 5379 5467 17299488 17299400 1.740000e-21 115.0
36 TraesCS4A01G042400 chr6D 95.455 44 2 0 2157 2200 25929193 25929150 3.810000e-08 71.3
37 TraesCS4A01G042400 chr2D 93.651 63 3 1 2149 2210 523616960 523617022 8.130000e-15 93.5
38 TraesCS4A01G042400 chr1D 96.296 54 2 0 2157 2210 439195386 439195333 1.050000e-13 89.8
39 TraesCS4A01G042400 chr5D 83.333 96 15 1 5373 5468 481255900 481255994 3.780000e-13 87.9
40 TraesCS4A01G042400 chr2A 92.063 63 4 1 2149 2210 669421668 669421730 3.780000e-13 87.9
41 TraesCS4A01G042400 chr2B 90.741 54 5 0 2157 2210 617870626 617870679 1.060000e-08 73.1
42 TraesCS4A01G042400 chr7B 97.500 40 1 0 5426 5465 72328237 72328276 1.370000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G042400 chr4A 35617957 35625569 7612 False 14059.000000 14059 100.000000 1 7613 1 chr4A.!!$F1 7612
1 TraesCS4A01G042400 chr4A 35619727 35622084 2357 False 524.000000 593 87.588500 1771 4128 4 chr4A.!!$F3 2357
2 TraesCS4A01G042400 chr4D 434267470 434273576 6106 False 1271.857143 3018 90.676143 1 7613 7 chr4D.!!$F1 7612
3 TraesCS4A01G042400 chr4B 533491003 533498507 7504 False 1200.285714 2750 90.094286 1 7613 7 chr4B.!!$F2 7612

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
711 866 0.752009 CCCGACTAGCTCTGCCAGTA 60.752 60.000 0.00 0.00 0.00 2.74 F
1006 1187 0.320374 TTCGTGTGAGGTGATGACCC 59.680 55.000 0.00 0.00 44.40 4.46 F
1008 1189 0.670546 CGTGTGAGGTGATGACCCAC 60.671 60.000 13.45 13.45 44.40 4.61 F
1015 1196 1.002134 GTGATGACCCACCCCACTG 60.002 63.158 0.00 0.00 0.00 3.66 F
1016 1197 2.044946 GATGACCCACCCCACTGC 60.045 66.667 0.00 0.00 0.00 4.40 F
1017 1198 3.645268 GATGACCCACCCCACTGCC 62.645 68.421 0.00 0.00 0.00 4.85 F
1019 1200 4.035102 GACCCACCCCACTGCCTC 62.035 72.222 0.00 0.00 0.00 4.70 F
4170 4372 6.363626 GTCGTATGTATGTATCAAGCCAGAAG 59.636 42.308 0.00 0.00 0.00 2.85 F
4666 4938 0.029681 ACCACCAGGGATGGAGCTAT 60.030 55.000 2.98 0.00 39.87 2.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1518 1699 3.458163 TCGACGGAGACCATGGGC 61.458 66.667 18.09 14.76 0.00 5.36 R
4128 4330 7.919690 ACATACGACCAACATATTTTGATCTG 58.080 34.615 3.10 0.00 0.00 2.90 R
4132 4334 8.725405 ACATACATACGACCAACATATTTTGA 57.275 30.769 3.10 0.00 0.00 2.69 R
4160 4362 3.525268 ACAAAACAACCTTCTGGCTTG 57.475 42.857 0.00 0.00 36.63 4.01 R
4170 4372 7.732664 AGACGAACGTAATATACAAAACAACC 58.267 34.615 0.00 0.00 0.00 3.77 R
4191 4393 5.173312 CGAGCACCATTTAATACAGTAGACG 59.827 44.000 0.00 0.00 0.00 4.18 R
4197 4399 4.634004 TGTTCCGAGCACCATTTAATACAG 59.366 41.667 0.00 0.00 0.00 2.74 R
6267 6585 0.035598 TTGGAGACGCCGAAAATGGA 59.964 50.000 0.00 0.00 40.66 3.41 R
7018 8621 0.107831 ACAGTTGTCCGGCTTTAGCA 59.892 50.000 0.00 0.00 44.36 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 31 3.257469 TCAGGTAAATGAGAGCTGCTG 57.743 47.619 7.01 0.00 41.25 4.41
78 82 3.748568 GTGTAGAAAAGCACTCCTGGAAG 59.251 47.826 0.00 0.00 33.22 3.46
101 105 3.509575 TGGAAGCTTGACAACTGTTTTGT 59.490 39.130 2.10 0.00 34.97 2.83
105 109 4.986622 AGCTTGACAACTGTTTTGTCTTC 58.013 39.130 16.01 7.05 46.53 2.87
114 118 4.007659 ACTGTTTTGTCTTCCTGTTCGTT 58.992 39.130 0.00 0.00 0.00 3.85
260 268 5.824624 TCATGAAGATTAATGAACCTGCTCC 59.175 40.000 0.00 0.00 29.97 4.70
314 330 2.156102 TATGCACCCAAATCATGCCA 57.844 45.000 0.00 0.00 38.63 4.92
330 346 3.902881 TGCCAATCTTTTTGGTTGTGT 57.097 38.095 6.27 0.00 41.53 3.72
331 347 4.213564 TGCCAATCTTTTTGGTTGTGTT 57.786 36.364 6.27 0.00 41.53 3.32
383 488 2.368439 TCTCCATTGTTGCTGGTATGC 58.632 47.619 0.00 0.00 35.19 3.14
384 489 2.093890 CTCCATTGTTGCTGGTATGCA 58.906 47.619 0.00 0.00 41.65 3.96
385 490 2.093890 TCCATTGTTGCTGGTATGCAG 58.906 47.619 0.00 0.00 44.27 4.41
416 527 3.486383 TCAGTCATTCCTTGTGGTTTCC 58.514 45.455 0.00 0.00 34.23 3.13
455 566 6.969366 TCTGTTTCATATGTTCCTTTGTGTG 58.031 36.000 1.90 0.00 0.00 3.82
470 584 5.971202 CCTTTGTGTGTCTAACATGTTCAAC 59.029 40.000 15.85 14.47 41.97 3.18
491 605 3.134804 ACCGATAGCTTTGCTACTCCATT 59.865 43.478 0.00 0.00 44.24 3.16
493 607 4.576463 CCGATAGCTTTGCTACTCCATTTT 59.424 41.667 0.00 0.00 44.24 1.82
496 610 3.160269 AGCTTTGCTACTCCATTTTGCT 58.840 40.909 0.00 0.00 36.99 3.91
508 622 9.276590 CTACTCCATTTTGCTTGATATACATGA 57.723 33.333 0.00 0.00 0.00 3.07
510 624 9.797642 ACTCCATTTTGCTTGATATACATGATA 57.202 29.630 0.00 0.00 0.00 2.15
538 652 9.930693 AAATATTTATAGACGATCAGAGGGTTC 57.069 33.333 0.00 0.00 0.00 3.62
539 653 8.887264 ATATTTATAGACGATCAGAGGGTTCT 57.113 34.615 0.00 0.00 0.00 3.01
540 654 9.976776 ATATTTATAGACGATCAGAGGGTTCTA 57.023 33.333 0.00 0.00 30.73 2.10
541 655 8.707796 ATTTATAGACGATCAGAGGGTTCTAA 57.292 34.615 0.00 0.00 30.73 2.10
542 656 8.529424 TTTATAGACGATCAGAGGGTTCTAAA 57.471 34.615 0.00 0.00 30.73 1.85
543 657 8.529424 TTATAGACGATCAGAGGGTTCTAAAA 57.471 34.615 0.00 0.00 30.73 1.52
544 658 5.941555 AGACGATCAGAGGGTTCTAAAAT 57.058 39.130 0.00 0.00 30.73 1.82
545 659 8.707796 ATAGACGATCAGAGGGTTCTAAAATA 57.292 34.615 0.00 0.00 30.73 1.40
546 660 7.045126 AGACGATCAGAGGGTTCTAAAATAG 57.955 40.000 0.00 0.00 30.73 1.73
547 661 5.602628 ACGATCAGAGGGTTCTAAAATAGC 58.397 41.667 0.00 0.00 30.73 2.97
548 662 4.991687 CGATCAGAGGGTTCTAAAATAGCC 59.008 45.833 0.00 0.00 30.73 3.93
549 663 5.453339 CGATCAGAGGGTTCTAAAATAGCCA 60.453 44.000 0.00 0.00 34.38 4.75
550 664 5.359194 TCAGAGGGTTCTAAAATAGCCAG 57.641 43.478 0.00 0.00 34.38 4.85
551 665 5.030147 TCAGAGGGTTCTAAAATAGCCAGA 58.970 41.667 0.00 0.00 34.38 3.86
552 666 5.104900 TCAGAGGGTTCTAAAATAGCCAGAC 60.105 44.000 0.00 0.00 34.38 3.51
553 667 4.783227 AGAGGGTTCTAAAATAGCCAGACA 59.217 41.667 0.00 0.00 34.38 3.41
554 668 5.104259 AGGGTTCTAAAATAGCCAGACAG 57.896 43.478 0.00 0.00 34.38 3.51
555 669 4.783227 AGGGTTCTAAAATAGCCAGACAGA 59.217 41.667 0.00 0.00 34.38 3.41
556 670 4.876679 GGGTTCTAAAATAGCCAGACAGAC 59.123 45.833 0.00 0.00 32.24 3.51
557 671 5.338463 GGGTTCTAAAATAGCCAGACAGACT 60.338 44.000 0.00 0.00 32.24 3.24
558 672 6.174049 GGTTCTAAAATAGCCAGACAGACTT 58.826 40.000 0.00 0.00 0.00 3.01
559 673 6.314152 GGTTCTAAAATAGCCAGACAGACTTC 59.686 42.308 0.00 0.00 0.00 3.01
560 674 6.605471 TCTAAAATAGCCAGACAGACTTCA 57.395 37.500 0.00 0.00 0.00 3.02
561 675 7.004555 TCTAAAATAGCCAGACAGACTTCAA 57.995 36.000 0.00 0.00 0.00 2.69
562 676 7.450074 TCTAAAATAGCCAGACAGACTTCAAA 58.550 34.615 0.00 0.00 0.00 2.69
563 677 6.566197 AAAATAGCCAGACAGACTTCAAAG 57.434 37.500 0.00 0.00 0.00 2.77
564 678 5.489792 AATAGCCAGACAGACTTCAAAGA 57.510 39.130 0.00 0.00 0.00 2.52
571 685 5.221422 CCAGACAGACTTCAAAGACTCTCTT 60.221 44.000 0.00 0.00 38.59 2.85
572 686 6.279882 CAGACAGACTTCAAAGACTCTCTTT 58.720 40.000 0.00 0.00 46.75 2.52
586 700 1.536766 TCTCTTTGCTGTTTGGCATCG 59.463 47.619 0.00 0.00 42.09 3.84
597 711 2.746277 GGCATCGCCGTTCTTGGT 60.746 61.111 0.00 0.00 39.62 3.67
598 712 2.332654 GGCATCGCCGTTCTTGGTT 61.333 57.895 0.00 0.00 39.62 3.67
599 713 1.134694 GCATCGCCGTTCTTGGTTC 59.865 57.895 0.00 0.00 0.00 3.62
600 714 1.573829 GCATCGCCGTTCTTGGTTCA 61.574 55.000 0.00 0.00 0.00 3.18
618 735 9.350357 CTTGGTTCATGTTTCATTTCTCTAATG 57.650 33.333 0.00 0.00 44.14 1.90
623 740 8.114331 TCATGTTTCATTTCTCTAATGTTGCT 57.886 30.769 0.00 0.00 43.41 3.91
631 748 7.879677 TCATTTCTCTAATGTTGCTTCTTCTCA 59.120 33.333 0.00 0.00 43.41 3.27
632 749 8.509690 CATTTCTCTAATGTTGCTTCTTCTCAA 58.490 33.333 0.00 0.00 39.05 3.02
636 753 8.099537 TCTCTAATGTTGCTTCTTCTCAATTCT 58.900 33.333 0.00 0.00 0.00 2.40
637 754 8.627208 TCTAATGTTGCTTCTTCTCAATTCTT 57.373 30.769 0.00 0.00 0.00 2.52
638 755 8.509690 TCTAATGTTGCTTCTTCTCAATTCTTG 58.490 33.333 0.00 0.00 0.00 3.02
639 756 6.889301 ATGTTGCTTCTTCTCAATTCTTGA 57.111 33.333 0.00 0.00 38.17 3.02
640 757 6.698008 TGTTGCTTCTTCTCAATTCTTGAA 57.302 33.333 0.00 0.00 39.58 2.69
641 758 7.099266 TGTTGCTTCTTCTCAATTCTTGAAA 57.901 32.000 0.00 0.00 39.58 2.69
642 759 7.719483 TGTTGCTTCTTCTCAATTCTTGAAAT 58.281 30.769 0.00 0.00 39.58 2.17
645 762 7.149973 TGCTTCTTCTCAATTCTTGAAATTGG 58.850 34.615 9.83 2.94 39.58 3.16
648 765 4.439305 TCTCAATTCTTGAAATTGGCGG 57.561 40.909 9.83 3.13 39.58 6.13
649 766 3.193267 TCTCAATTCTTGAAATTGGCGGG 59.807 43.478 9.83 1.28 39.58 6.13
650 767 3.161067 TCAATTCTTGAAATTGGCGGGA 58.839 40.909 9.83 0.00 38.00 5.14
651 768 3.768757 TCAATTCTTGAAATTGGCGGGAT 59.231 39.130 9.83 0.00 38.00 3.85
653 770 2.505650 TCTTGAAATTGGCGGGATCA 57.494 45.000 0.00 0.00 0.00 2.92
654 771 2.368439 TCTTGAAATTGGCGGGATCAG 58.632 47.619 0.00 0.00 0.00 2.90
655 772 2.094675 CTTGAAATTGGCGGGATCAGT 58.905 47.619 0.00 0.00 0.00 3.41
667 820 4.439057 GCGGGATCAGTACATAGTTTCAA 58.561 43.478 0.00 0.00 0.00 2.69
669 824 5.050490 CGGGATCAGTACATAGTTTCAAGG 58.950 45.833 0.00 0.00 0.00 3.61
690 845 7.947890 TCAAGGAAACAAGGGTCTAATGTTTAT 59.052 33.333 3.38 0.00 44.72 1.40
692 847 8.349568 AGGAAACAAGGGTCTAATGTTTATTC 57.650 34.615 3.38 0.00 44.72 1.75
693 848 7.396339 AGGAAACAAGGGTCTAATGTTTATTCC 59.604 37.037 3.38 2.01 44.72 3.01
698 853 4.720273 AGGGTCTAATGTTTATTCCCGACT 59.280 41.667 0.00 0.00 34.55 4.18
705 860 4.386867 TGTTTATTCCCGACTAGCTCTG 57.613 45.455 0.00 0.00 0.00 3.35
707 862 1.329256 TATTCCCGACTAGCTCTGCC 58.671 55.000 0.00 0.00 0.00 4.85
711 866 0.752009 CCCGACTAGCTCTGCCAGTA 60.752 60.000 0.00 0.00 0.00 2.74
774 929 5.229921 TGTTTGTCTTCGGAACAAGAAAG 57.770 39.130 0.00 0.00 34.11 2.62
829 987 5.942961 TCAGGTGTTTAGGGATGTGTTTAA 58.057 37.500 0.00 0.00 0.00 1.52
847 1005 6.474427 GTGTTTAAAAAGGGTTGTACTGAAGC 59.526 38.462 0.00 0.00 0.00 3.86
848 1006 6.153000 TGTTTAAAAAGGGTTGTACTGAAGCA 59.847 34.615 0.00 0.00 0.00 3.91
849 1007 4.918810 AAAAAGGGTTGTACTGAAGCAG 57.081 40.909 0.00 0.00 37.52 4.24
851 1009 3.857157 AAGGGTTGTACTGAAGCAGAA 57.143 42.857 0.82 0.00 35.18 3.02
852 1010 3.409026 AGGGTTGTACTGAAGCAGAAG 57.591 47.619 0.82 0.00 35.18 2.85
853 1011 2.706190 AGGGTTGTACTGAAGCAGAAGT 59.294 45.455 0.82 0.00 35.18 3.01
854 1012 2.808543 GGGTTGTACTGAAGCAGAAGTG 59.191 50.000 0.82 0.00 35.18 3.16
855 1013 3.494398 GGGTTGTACTGAAGCAGAAGTGA 60.494 47.826 0.82 0.00 35.18 3.41
856 1014 4.319177 GGTTGTACTGAAGCAGAAGTGAT 58.681 43.478 0.82 0.00 35.18 3.06
860 1018 7.119846 GGTTGTACTGAAGCAGAAGTGATTATT 59.880 37.037 0.82 0.00 30.57 1.40
861 1019 9.151471 GTTGTACTGAAGCAGAAGTGATTATTA 57.849 33.333 0.82 0.00 30.57 0.98
862 1020 9.890629 TTGTACTGAAGCAGAAGTGATTATTAT 57.109 29.630 0.82 0.00 30.57 1.28
863 1021 9.317936 TGTACTGAAGCAGAAGTGATTATTATG 57.682 33.333 0.82 0.00 30.57 1.90
864 1022 9.319143 GTACTGAAGCAGAAGTGATTATTATGT 57.681 33.333 0.82 0.00 30.57 2.29
866 1024 9.319143 ACTGAAGCAGAAGTGATTATTATGTAC 57.681 33.333 0.82 0.00 30.57 2.90
867 1025 9.317936 CTGAAGCAGAAGTGATTATTATGTACA 57.682 33.333 0.00 0.00 30.57 2.90
868 1026 9.098355 TGAAGCAGAAGTGATTATTATGTACAC 57.902 33.333 0.00 0.00 30.57 2.90
869 1027 7.700322 AGCAGAAGTGATTATTATGTACACG 57.300 36.000 0.00 0.00 36.71 4.49
870 1028 7.489160 AGCAGAAGTGATTATTATGTACACGA 58.511 34.615 0.00 0.00 36.71 4.35
871 1029 8.144478 AGCAGAAGTGATTATTATGTACACGAT 58.856 33.333 0.00 0.00 36.71 3.73
872 1030 8.217115 GCAGAAGTGATTATTATGTACACGATG 58.783 37.037 0.00 0.00 36.71 3.84
887 1045 7.488322 TGTACACGATGATGATGAAAGACATA 58.512 34.615 0.00 0.00 39.56 2.29
956 1137 2.828874 GAGTAGTCGAGTGTACCAGC 57.171 55.000 2.10 0.00 0.00 4.85
960 1141 1.446272 GTCGAGTGTACCAGCAGGC 60.446 63.158 0.00 0.00 39.06 4.85
963 1144 2.603473 AGTGTACCAGCAGGCCGA 60.603 61.111 0.00 0.00 39.06 5.54
979 1160 2.421739 GAGTGCGTGACAGTGGGT 59.578 61.111 0.00 0.00 29.71 4.51
990 1171 2.995574 AGTGGGTCGGGGTCTTCG 60.996 66.667 0.00 0.00 0.00 3.79
991 1172 3.308705 GTGGGTCGGGGTCTTCGT 61.309 66.667 0.00 0.00 0.00 3.85
992 1173 3.307906 TGGGTCGGGGTCTTCGTG 61.308 66.667 0.00 0.00 0.00 4.35
995 1176 2.567497 GGTCGGGGTCTTCGTGTGA 61.567 63.158 0.00 0.00 0.00 3.58
996 1177 1.080705 GTCGGGGTCTTCGTGTGAG 60.081 63.158 0.00 0.00 0.00 3.51
999 1180 1.004918 GGGGTCTTCGTGTGAGGTG 60.005 63.158 0.00 0.00 0.00 4.00
1000 1181 1.469335 GGGGTCTTCGTGTGAGGTGA 61.469 60.000 0.00 0.00 0.00 4.02
1001 1182 0.608640 GGGTCTTCGTGTGAGGTGAT 59.391 55.000 0.00 0.00 0.00 3.06
1002 1183 1.673033 GGGTCTTCGTGTGAGGTGATG 60.673 57.143 0.00 0.00 0.00 3.07
1003 1184 1.272490 GGTCTTCGTGTGAGGTGATGA 59.728 52.381 0.00 0.00 0.00 2.92
1004 1185 2.329379 GTCTTCGTGTGAGGTGATGAC 58.671 52.381 0.00 0.00 32.16 3.06
1005 1186 1.272490 TCTTCGTGTGAGGTGATGACC 59.728 52.381 0.00 0.00 43.52 4.02
1006 1187 0.320374 TTCGTGTGAGGTGATGACCC 59.680 55.000 0.00 0.00 44.40 4.46
1007 1188 0.830023 TCGTGTGAGGTGATGACCCA 60.830 55.000 0.00 0.00 44.40 4.51
1008 1189 0.670546 CGTGTGAGGTGATGACCCAC 60.671 60.000 13.45 13.45 44.40 4.61
1014 1195 3.495729 GTGATGACCCACCCCACT 58.504 61.111 0.00 0.00 0.00 4.00
1015 1196 1.002134 GTGATGACCCACCCCACTG 60.002 63.158 0.00 0.00 0.00 3.66
1016 1197 2.044946 GATGACCCACCCCACTGC 60.045 66.667 0.00 0.00 0.00 4.40
1017 1198 3.645268 GATGACCCACCCCACTGCC 62.645 68.421 0.00 0.00 0.00 4.85
1018 1199 4.918360 TGACCCACCCCACTGCCT 62.918 66.667 0.00 0.00 0.00 4.75
1019 1200 4.035102 GACCCACCCCACTGCCTC 62.035 72.222 0.00 0.00 0.00 4.70
4128 4330 8.994429 AGATCGATATGATGGAGTTAATGTTC 57.006 34.615 0.00 0.00 37.47 3.18
4129 4331 8.588472 AGATCGATATGATGGAGTTAATGTTCA 58.412 33.333 0.00 0.00 37.47 3.18
4130 4332 8.768957 ATCGATATGATGGAGTTAATGTTCAG 57.231 34.615 0.00 0.00 35.45 3.02
4131 4333 7.951591 TCGATATGATGGAGTTAATGTTCAGA 58.048 34.615 0.00 0.00 0.00 3.27
4132 4334 8.588472 TCGATATGATGGAGTTAATGTTCAGAT 58.412 33.333 0.00 0.00 0.00 2.90
4133 4335 8.867935 CGATATGATGGAGTTAATGTTCAGATC 58.132 37.037 0.00 0.00 31.72 2.75
4134 4336 9.716531 GATATGATGGAGTTAATGTTCAGATCA 57.283 33.333 0.00 0.00 33.96 2.92
4170 4372 6.363626 GTCGTATGTATGTATCAAGCCAGAAG 59.636 42.308 0.00 0.00 0.00 2.85
4191 4393 9.537848 CAGAAGGTTGTTTTGTATATTACGTTC 57.462 33.333 0.00 0.00 32.28 3.95
4197 4399 9.662157 GTTGTTTTGTATATTACGTTCGTCTAC 57.338 33.333 0.00 1.74 0.00 2.59
4213 4415 6.216801 TCGTCTACTGTATTAAATGGTGCT 57.783 37.500 0.00 0.00 0.00 4.40
4215 4417 5.173312 CGTCTACTGTATTAAATGGTGCTCG 59.827 44.000 0.00 0.00 0.00 5.03
4227 4429 2.096248 TGGTGCTCGGAACAAAAGTTT 58.904 42.857 0.00 0.00 0.00 2.66
4234 4436 3.207778 TCGGAACAAAAGTTTGGATCGT 58.792 40.909 8.55 0.00 42.34 3.73
4247 4449 3.536956 TGGATCGTTAACCCTGATGTC 57.463 47.619 0.00 0.00 0.00 3.06
4266 4468 1.066215 TCGGATCAACACACATGGGAG 60.066 52.381 0.00 0.00 0.00 4.30
4268 4470 1.098050 GATCAACACACATGGGAGGC 58.902 55.000 0.00 0.00 0.00 4.70
4278 4480 4.220382 CACACATGGGAGGCTTTTCATTTA 59.780 41.667 0.00 0.00 0.00 1.40
4279 4481 4.220602 ACACATGGGAGGCTTTTCATTTAC 59.779 41.667 0.00 0.00 0.00 2.01
4312 4514 3.068873 TGGTTTTTGATTTGGAACTCCCG 59.931 43.478 0.00 0.00 37.93 5.14
4314 4516 0.878416 TTTGATTTGGAACTCCCGCG 59.122 50.000 0.00 0.00 37.93 6.46
4316 4518 2.045340 ATTTGGAACTCCCGCGGG 60.045 61.111 39.13 39.13 37.93 6.13
4349 4561 4.155063 TGTGTATTCTGGTGGATGGATG 57.845 45.455 0.00 0.00 0.00 3.51
4350 4562 2.880890 GTGTATTCTGGTGGATGGATGC 59.119 50.000 0.00 0.00 0.00 3.91
4356 4568 2.037641 TCTGGTGGATGGATGCTATTCG 59.962 50.000 0.00 0.00 0.00 3.34
4380 4592 9.841880 TCGAAAGGATAGATAGACATTAAATCG 57.158 33.333 0.00 0.00 0.00 3.34
4383 4595 9.930693 AAAGGATAGATAGACATTAAATCGACC 57.069 33.333 0.00 0.00 0.00 4.79
4394 4606 7.331193 AGACATTAAATCGACCTTCTTGTGTAC 59.669 37.037 0.00 0.00 0.00 2.90
4395 4607 6.370718 ACATTAAATCGACCTTCTTGTGTACC 59.629 38.462 0.00 0.00 0.00 3.34
4405 4617 2.513753 TCTTGTGTACCAATGCCCAAG 58.486 47.619 0.00 0.00 31.20 3.61
4422 4634 4.530875 CCCAAGCCTACAATTCAGAAGAT 58.469 43.478 0.00 0.00 0.00 2.40
4606 4878 1.343069 AGTTGAGACCCAGAGTGGAC 58.657 55.000 0.00 0.00 40.96 4.02
4608 4880 0.105194 TTGAGACCCAGAGTGGACCA 60.105 55.000 0.00 0.00 40.96 4.02
4637 4909 4.092116 AGCCCTATATTCCAGACTTTGC 57.908 45.455 0.00 0.00 0.00 3.68
4638 4910 3.459598 AGCCCTATATTCCAGACTTTGCA 59.540 43.478 0.00 0.00 0.00 4.08
4639 4911 3.565902 GCCCTATATTCCAGACTTTGCAC 59.434 47.826 0.00 0.00 0.00 4.57
4658 4930 2.121506 ACCACCACCACCAGGGAT 60.122 61.111 0.00 0.00 41.15 3.85
4666 4938 0.029681 ACCACCAGGGATGGAGCTAT 60.030 55.000 2.98 0.00 39.87 2.97
4676 4948 4.018324 AGGGATGGAGCTATACAGATCGTA 60.018 45.833 0.00 0.97 38.12 3.43
4678 4950 4.944930 GGATGGAGCTATACAGATCGTAGT 59.055 45.833 0.00 0.01 38.12 2.73
4713 4985 5.129485 AGAATAAAAGGCACTGAGCTAGCTA 59.871 40.000 19.38 5.49 44.79 3.32
4714 4986 2.977772 AAAGGCACTGAGCTAGCTAG 57.022 50.000 19.38 16.84 44.79 3.42
4715 4987 1.118838 AAGGCACTGAGCTAGCTAGG 58.881 55.000 19.38 15.48 44.79 3.02
4716 4988 1.068921 GGCACTGAGCTAGCTAGGC 59.931 63.158 19.38 17.66 44.79 3.93
4717 4989 1.068921 GCACTGAGCTAGCTAGGCC 59.931 63.158 19.38 5.63 41.15 5.19
4720 4992 1.484240 CACTGAGCTAGCTAGGCCTTT 59.516 52.381 19.38 0.00 0.00 3.11
4759 5039 4.994907 TCATGATTGGCTCAAATTCCAG 57.005 40.909 0.00 0.00 37.44 3.86
4761 5041 4.158949 TCATGATTGGCTCAAATTCCAGTG 59.841 41.667 0.00 0.00 37.44 3.66
4762 5042 2.827322 TGATTGGCTCAAATTCCAGTGG 59.173 45.455 1.40 1.40 33.32 4.00
4779 5059 2.434359 GGGAACTTCGTCGGCTGG 60.434 66.667 0.00 0.00 0.00 4.85
4816 5096 4.577246 GTCGCCGGGAGCTAGCTG 62.577 72.222 24.99 8.88 40.39 4.24
4832 5112 1.174712 GCTGTGCCACTGACAACCAT 61.175 55.000 5.85 0.00 0.00 3.55
4834 5114 1.286880 GTGCCACTGACAACCATGC 59.713 57.895 0.00 0.00 0.00 4.06
4838 5118 1.031235 CCACTGACAACCATGCAACA 58.969 50.000 0.00 0.00 0.00 3.33
4865 5145 2.041922 AGGAGCCGCCCTACATGA 60.042 61.111 0.00 0.00 37.37 3.07
4907 5187 3.501445 GCAGCTCCCTAATTAATCTGCTG 59.499 47.826 18.10 18.10 46.28 4.41
4931 5211 7.786030 TGATCCTACTTAATCTCTCTTTGGTG 58.214 38.462 0.00 0.00 0.00 4.17
4937 5217 5.703130 ACTTAATCTCTCTTTGGTGAACAGC 59.297 40.000 0.00 0.00 0.00 4.40
4950 5230 0.099436 GAACAGCGCCAACCATCATC 59.901 55.000 2.29 0.00 0.00 2.92
4953 5233 1.002257 AGCGCCAACCATCATCACA 60.002 52.632 2.29 0.00 0.00 3.58
4974 5254 9.698309 ATCACATACTAAGTACATGCTACATTC 57.302 33.333 0.00 0.00 0.00 2.67
4977 5257 7.648112 ACATACTAAGTACATGCTACATTCGTG 59.352 37.037 0.00 0.00 0.00 4.35
5001 5281 9.250624 GTGTATGTAGCAAAACTTAGAGATAGG 57.749 37.037 0.00 0.00 0.00 2.57
5084 5364 6.600388 AGACATAAAAGGGGCAAACAAATTT 58.400 32.000 0.00 0.00 0.00 1.82
5085 5365 7.740805 AGACATAAAAGGGGCAAACAAATTTA 58.259 30.769 0.00 0.00 0.00 1.40
5116 5396 4.512944 TCACAGCACTGAAGAGATCAAAAC 59.487 41.667 4.31 0.00 37.67 2.43
5144 5432 1.276415 CGTGTTTGTGCTGGTTTTGG 58.724 50.000 0.00 0.00 0.00 3.28
5152 5440 3.899726 TGTGCTGGTTTTGGTTAACCTA 58.100 40.909 24.78 15.42 46.28 3.08
5168 5456 8.636213 TGGTTAACCTAAAGTATAGGAGATTCG 58.364 37.037 24.78 0.00 38.09 3.34
5174 5462 6.490721 CCTAAAGTATAGGAGATTCGTGGTCT 59.509 42.308 0.00 0.00 36.85 3.85
5179 5467 7.107542 AGTATAGGAGATTCGTGGTCTAGATC 58.892 42.308 0.00 0.00 0.00 2.75
5190 5478 2.690497 TGGTCTAGATCTACTGCTGTGC 59.310 50.000 4.28 0.00 0.00 4.57
5209 5497 4.595350 TGTGCTGCATAGGTAATATGGGTA 59.405 41.667 5.27 0.00 41.49 3.69
5257 5545 9.132521 GCAAATATGAACATCTAATGGTTATGC 57.867 33.333 0.00 0.00 28.41 3.14
5267 5584 8.627403 ACATCTAATGGTTATGCTTTCTTGATG 58.373 33.333 0.00 0.00 33.60 3.07
5292 5609 2.507944 GGCCTGCCAGATCGATGT 59.492 61.111 0.54 0.00 35.81 3.06
5302 5619 3.624861 GCCAGATCGATGTTCAGATGTTT 59.375 43.478 0.54 0.00 0.00 2.83
5303 5620 4.095483 GCCAGATCGATGTTCAGATGTTTT 59.905 41.667 0.54 0.00 0.00 2.43
5394 5712 9.976776 ATATAATAGATACTCTCTCCGTTCCAA 57.023 33.333 0.00 0.00 35.28 3.53
5395 5713 8.707796 ATAATAGATACTCTCTCCGTTCCAAA 57.292 34.615 0.00 0.00 35.28 3.28
5396 5714 7.604657 AATAGATACTCTCTCCGTTCCAAAT 57.395 36.000 0.00 0.00 35.28 2.32
5397 5715 5.941555 AGATACTCTCTCCGTTCCAAATT 57.058 39.130 0.00 0.00 0.00 1.82
5398 5716 8.707796 ATAGATACTCTCTCCGTTCCAAATTA 57.292 34.615 0.00 0.00 35.28 1.40
5399 5717 7.419711 AGATACTCTCTCCGTTCCAAATTAA 57.580 36.000 0.00 0.00 0.00 1.40
5400 5718 8.024145 AGATACTCTCTCCGTTCCAAATTAAT 57.976 34.615 0.00 0.00 0.00 1.40
5401 5719 8.487028 AGATACTCTCTCCGTTCCAAATTAATT 58.513 33.333 0.00 0.00 0.00 1.40
5402 5720 6.743575 ACTCTCTCCGTTCCAAATTAATTG 57.256 37.500 0.39 0.00 38.84 2.32
5403 5721 6.238648 ACTCTCTCCGTTCCAAATTAATTGT 58.761 36.000 0.39 0.00 37.32 2.71
5404 5722 6.371825 ACTCTCTCCGTTCCAAATTAATTGTC 59.628 38.462 0.39 0.00 37.32 3.18
5405 5723 5.350365 TCTCTCCGTTCCAAATTAATTGTCG 59.650 40.000 0.39 3.26 37.32 4.35
5406 5724 4.086199 TCCGTTCCAAATTAATTGTCGC 57.914 40.909 0.39 0.00 37.32 5.19
5407 5725 3.754323 TCCGTTCCAAATTAATTGTCGCT 59.246 39.130 0.39 0.00 37.32 4.93
5408 5726 3.851403 CCGTTCCAAATTAATTGTCGCTG 59.149 43.478 0.39 0.00 37.32 5.18
5409 5727 4.378978 CCGTTCCAAATTAATTGTCGCTGA 60.379 41.667 0.39 0.00 37.32 4.26
5410 5728 5.331902 CGTTCCAAATTAATTGTCGCTGAT 58.668 37.500 0.39 0.00 37.32 2.90
5411 5729 6.457663 CCGTTCCAAATTAATTGTCGCTGATA 60.458 38.462 0.39 0.00 37.32 2.15
5412 5730 7.132213 CGTTCCAAATTAATTGTCGCTGATAT 58.868 34.615 0.39 0.00 37.32 1.63
5413 5731 8.279800 CGTTCCAAATTAATTGTCGCTGATATA 58.720 33.333 0.39 0.00 37.32 0.86
5414 5732 9.599322 GTTCCAAATTAATTGTCGCTGATATAG 57.401 33.333 0.39 0.00 37.32 1.31
5415 5733 8.902540 TCCAAATTAATTGTCGCTGATATAGT 57.097 30.769 0.39 0.00 37.32 2.12
5416 5734 9.990360 TCCAAATTAATTGTCGCTGATATAGTA 57.010 29.630 0.39 0.00 37.32 1.82
5421 5739 9.982651 ATTAATTGTCGCTGATATAGTACAACT 57.017 29.630 0.00 0.00 37.29 3.16
5422 5740 9.811995 TTAATTGTCGCTGATATAGTACAACTT 57.188 29.630 0.00 0.00 37.29 2.66
5423 5741 8.718102 AATTGTCGCTGATATAGTACAACTTT 57.282 30.769 0.00 0.00 37.29 2.66
5424 5742 7.520119 TTGTCGCTGATATAGTACAACTTTG 57.480 36.000 0.00 0.00 32.84 2.77
5425 5743 6.627243 TGTCGCTGATATAGTACAACTTTGT 58.373 36.000 0.00 0.00 44.86 2.83
5426 5744 7.764331 TGTCGCTGATATAGTACAACTTTGTA 58.236 34.615 0.00 0.00 42.35 2.41
5440 5758 6.597562 ACAACTTTGTACTAAATCAGGGACA 58.402 36.000 0.00 0.00 40.16 4.02
5441 5759 6.485648 ACAACTTTGTACTAAATCAGGGACAC 59.514 38.462 0.00 0.00 40.16 3.67
5442 5760 6.435292 ACTTTGTACTAAATCAGGGACACT 57.565 37.500 0.00 0.00 0.00 3.55
5443 5761 6.838382 ACTTTGTACTAAATCAGGGACACTT 58.162 36.000 0.00 0.00 0.00 3.16
5444 5762 6.710744 ACTTTGTACTAAATCAGGGACACTTG 59.289 38.462 0.00 0.00 0.00 3.16
5445 5763 6.428083 TTGTACTAAATCAGGGACACTTGA 57.572 37.500 0.00 0.00 0.00 3.02
5446 5764 6.620877 TGTACTAAATCAGGGACACTTGAT 57.379 37.500 0.00 0.00 0.00 2.57
5447 5765 7.727578 TGTACTAAATCAGGGACACTTGATA 57.272 36.000 0.00 0.00 0.00 2.15
5448 5766 8.319057 TGTACTAAATCAGGGACACTTGATAT 57.681 34.615 0.00 0.00 0.00 1.63
5449 5767 8.204160 TGTACTAAATCAGGGACACTTGATATG 58.796 37.037 0.00 0.00 0.00 1.78
5450 5768 6.595682 ACTAAATCAGGGACACTTGATATGG 58.404 40.000 0.00 0.00 0.00 2.74
5451 5769 5.715439 AAATCAGGGACACTTGATATGGA 57.285 39.130 0.00 0.00 0.00 3.41
5452 5770 5.715439 AATCAGGGACACTTGATATGGAA 57.285 39.130 0.00 0.00 0.00 3.53
5453 5771 5.919348 ATCAGGGACACTTGATATGGAAT 57.081 39.130 0.00 0.00 0.00 3.01
5454 5772 5.039920 TCAGGGACACTTGATATGGAATG 57.960 43.478 0.00 0.00 0.00 2.67
5455 5773 4.139786 CAGGGACACTTGATATGGAATGG 58.860 47.826 0.00 0.00 0.00 3.16
5456 5774 4.047166 AGGGACACTTGATATGGAATGGA 58.953 43.478 0.00 0.00 0.00 3.41
5457 5775 4.103785 AGGGACACTTGATATGGAATGGAG 59.896 45.833 0.00 0.00 0.00 3.86
5458 5776 4.392940 GGACACTTGATATGGAATGGAGG 58.607 47.826 0.00 0.00 0.00 4.30
5459 5777 4.392940 GACACTTGATATGGAATGGAGGG 58.607 47.826 0.00 0.00 0.00 4.30
5460 5778 4.047166 ACACTTGATATGGAATGGAGGGA 58.953 43.478 0.00 0.00 0.00 4.20
5461 5779 4.103785 ACACTTGATATGGAATGGAGGGAG 59.896 45.833 0.00 0.00 0.00 4.30
5466 5784 5.920347 TGATATGGAATGGAGGGAGTAGAT 58.080 41.667 0.00 0.00 0.00 1.98
5472 5790 6.689561 TGGAATGGAGGGAGTAGATAGTAAA 58.310 40.000 0.00 0.00 0.00 2.01
5515 5833 9.328721 GCATTTTTGGTTATTGCTGTATTTTTC 57.671 29.630 0.00 0.00 0.00 2.29
5533 5851 2.988010 TCAGTTAGCGCTGATCCATT 57.012 45.000 22.90 0.00 40.23 3.16
5540 5858 1.741706 AGCGCTGATCCATTTTCTGTG 59.258 47.619 10.39 0.00 0.00 3.66
5560 5878 5.368145 TGTGTACTGCATATCCAGGAAATC 58.632 41.667 0.00 0.00 37.16 2.17
5590 5908 5.046014 AGCTAGCAATCTTCCTCAGAAAGAA 60.046 40.000 18.83 0.00 34.16 2.52
5707 6025 3.137360 ACCTCCTCCAGCTCAATAAATCC 59.863 47.826 0.00 0.00 0.00 3.01
5722 6040 1.734655 AATCCGCCCAGGTATCAGAT 58.265 50.000 0.00 0.00 41.99 2.90
5729 6047 2.045524 CCCAGGTATCAGATGAGCTGT 58.954 52.381 0.00 0.00 45.14 4.40
5738 6056 4.462508 TCAGATGAGCTGTAAACCTGAG 57.537 45.455 0.00 0.00 45.14 3.35
5748 6066 4.331168 GCTGTAAACCTGAGACATCATGAC 59.669 45.833 0.00 0.00 34.12 3.06
5752 6070 6.942005 TGTAAACCTGAGACATCATGACAATT 59.058 34.615 0.00 0.00 34.12 2.32
5759 6077 8.464404 CCTGAGACATCATGACAATTAATTTGT 58.536 33.333 0.00 0.00 42.24 2.83
5783 6101 6.204882 GTCCTGCTTTTAACATACTCTGTGTT 59.795 38.462 0.00 0.00 42.12 3.32
5788 6106 8.894731 TGCTTTTAACATACTCTGTGTTGTTTA 58.105 29.630 12.20 5.07 39.88 2.01
5811 6129 0.610232 AGGAACTTGCAGCCCACATC 60.610 55.000 0.00 0.00 27.25 3.06
5982 6300 5.581085 CCTACGCAAAGTGTATAAAGAGCTT 59.419 40.000 0.00 0.00 0.00 3.74
5997 6315 5.830799 AAGAGCTTTTGGAAAATTGGGAT 57.169 34.783 0.00 0.00 0.00 3.85
6051 6369 0.250727 CACCGGAGAAAGCTTTCCCA 60.251 55.000 30.83 0.00 37.92 4.37
6075 6393 3.218398 GACAAACATATATTCAGCGCGC 58.782 45.455 26.66 26.66 0.00 6.86
6112 6430 8.924511 AAAAGATCTTTATCAGGACAAGTTGA 57.075 30.769 20.76 0.00 34.28 3.18
6117 6435 6.409704 TCTTTATCAGGACAAGTTGATGGAG 58.590 40.000 10.54 0.00 35.72 3.86
6120 6438 4.916041 TCAGGACAAGTTGATGGAGAAT 57.084 40.909 10.54 0.00 0.00 2.40
6133 6451 8.248945 AGTTGATGGAGAATATCAAGCAAAAAG 58.751 33.333 0.00 0.00 38.94 2.27
6168 6486 4.458397 CAGAGCCTGATCACATGGTAATT 58.542 43.478 0.00 0.00 32.44 1.40
6207 6525 1.377333 GAAAACCGCTCCTCCTGGG 60.377 63.158 0.00 0.00 0.00 4.45
6267 6585 2.275380 GGGTTGGCAGCCGAATGTT 61.275 57.895 14.54 0.00 0.00 2.71
6529 6847 4.385405 GTGAGACGCAGCTGGGCT 62.385 66.667 28.90 24.75 40.77 5.19
6558 6876 2.281484 TTTCTGTCTGGGCGTGGC 60.281 61.111 0.00 0.00 0.00 5.01
6826 7146 2.147436 TTGGCGTGCCTTTCAATTTC 57.853 45.000 12.84 0.00 36.94 2.17
6838 7159 5.481105 CCTTTCAATTTCTTGCATTGCCTA 58.519 37.500 6.12 0.00 32.49 3.93
6889 7211 4.022329 ACCCATTTTGAACACGGAGATTTC 60.022 41.667 0.00 0.00 0.00 2.17
6918 7240 7.069344 TGGATCTTCCAGTAGTTGATCATCTA 58.931 38.462 9.07 9.07 42.67 1.98
6924 7246 9.689976 CTTCCAGTAGTTGATCATCTAATACAG 57.310 37.037 13.82 6.96 28.14 2.74
6925 7247 8.996651 TCCAGTAGTTGATCATCTAATACAGA 57.003 34.615 13.82 8.62 37.79 3.41
6926 7248 9.072375 TCCAGTAGTTGATCATCTAATACAGAG 57.928 37.037 13.82 2.87 36.48 3.35
6927 7249 9.072375 CCAGTAGTTGATCATCTAATACAGAGA 57.928 37.037 13.82 0.00 36.48 3.10
6932 7254 9.270640 AGTTGATCATCTAATACAGAGATTTGC 57.729 33.333 4.42 0.00 36.48 3.68
6933 7255 8.502387 GTTGATCATCTAATACAGAGATTTGCC 58.498 37.037 0.00 0.00 36.48 4.52
6934 7256 7.971201 TGATCATCTAATACAGAGATTTGCCT 58.029 34.615 0.00 0.00 36.48 4.75
6935 7257 8.093307 TGATCATCTAATACAGAGATTTGCCTC 58.907 37.037 0.00 0.00 36.48 4.70
6937 7259 7.971201 TCATCTAATACAGAGATTTGCCTCAT 58.029 34.615 0.00 0.00 36.48 2.90
6939 7261 9.064706 CATCTAATACAGAGATTTGCCTCATTT 57.935 33.333 0.00 0.00 36.48 2.32
6970 8573 5.220710 AGTACAGAGATGCAGTTGAGTTT 57.779 39.130 0.00 0.00 0.00 2.66
6979 8582 3.016031 TGCAGTTGAGTTTCAAGCAGAA 58.984 40.909 2.72 0.00 37.00 3.02
7007 8610 2.993220 GGTGAAAAATCGCCATGGTTTC 59.007 45.455 14.67 14.73 39.90 2.78
7008 8611 2.993220 GTGAAAAATCGCCATGGTTTCC 59.007 45.455 14.67 5.73 0.00 3.13
7011 8614 0.975556 AAATCGCCATGGTTTCCCCC 60.976 55.000 14.67 0.00 0.00 5.40
7012 8615 2.161713 AATCGCCATGGTTTCCCCCA 62.162 55.000 14.67 0.00 39.27 4.96
7013 8616 2.161713 ATCGCCATGGTTTCCCCCAA 62.162 55.000 14.67 0.00 38.20 4.12
7014 8617 1.910772 CGCCATGGTTTCCCCCAAA 60.911 57.895 14.67 0.00 38.20 3.28
7015 8618 1.476007 CGCCATGGTTTCCCCCAAAA 61.476 55.000 14.67 0.00 38.20 2.44
7016 8619 0.036164 GCCATGGTTTCCCCCAAAAC 59.964 55.000 14.67 0.00 38.20 2.43
7017 8620 1.428869 CCATGGTTTCCCCCAAAACA 58.571 50.000 2.57 0.00 46.01 2.83
7020 8623 0.761802 TGGTTTCCCCCAAAACATGC 59.238 50.000 0.00 0.00 36.72 4.06
7021 8624 1.055849 GGTTTCCCCCAAAACATGCT 58.944 50.000 0.00 0.00 40.22 3.79
7022 8625 2.252714 GGTTTCCCCCAAAACATGCTA 58.747 47.619 0.00 0.00 40.22 3.49
7023 8626 2.635427 GGTTTCCCCCAAAACATGCTAA 59.365 45.455 0.00 0.00 40.22 3.09
7024 8627 3.071747 GGTTTCCCCCAAAACATGCTAAA 59.928 43.478 0.00 0.00 40.22 1.85
7025 8628 4.314961 GTTTCCCCCAAAACATGCTAAAG 58.685 43.478 0.00 0.00 38.68 1.85
7026 8629 1.899142 TCCCCCAAAACATGCTAAAGC 59.101 47.619 0.00 0.00 42.50 3.51
7027 8630 1.066215 CCCCCAAAACATGCTAAAGCC 60.066 52.381 0.00 0.00 41.18 4.35
7028 8631 1.404047 CCCCAAAACATGCTAAAGCCG 60.404 52.381 0.00 0.00 41.18 5.52
7040 8643 2.489971 CTAAAGCCGGACAACTGTTGA 58.510 47.619 26.00 0.35 0.00 3.18
7041 8644 1.757682 AAAGCCGGACAACTGTTGAA 58.242 45.000 26.00 0.00 0.00 2.69
7043 8646 0.180406 AGCCGGACAACTGTTGAAGT 59.820 50.000 26.00 4.65 42.60 3.01
7044 8647 0.307760 GCCGGACAACTGTTGAAGTG 59.692 55.000 26.00 12.56 39.81 3.16
7047 8671 3.199677 CCGGACAACTGTTGAAGTGTAA 58.800 45.455 26.00 0.00 39.81 2.41
7058 8682 7.202526 ACTGTTGAAGTGTAAATCACAATTGG 58.797 34.615 10.83 0.00 45.02 3.16
7072 8696 5.609423 TCACAATTGGACAAATTTGAAGGG 58.391 37.500 24.64 9.18 36.28 3.95
7077 8701 1.696884 GGACAAATTTGAAGGGCCCAA 59.303 47.619 27.56 10.13 0.00 4.12
7145 8769 4.035102 GGCCTTCCAACGCCTCCT 62.035 66.667 0.00 0.00 42.21 3.69
7146 8770 2.436824 GCCTTCCAACGCCTCCTC 60.437 66.667 0.00 0.00 0.00 3.71
7147 8771 2.269241 CCTTCCAACGCCTCCTCC 59.731 66.667 0.00 0.00 0.00 4.30
7148 8772 2.294078 CCTTCCAACGCCTCCTCCT 61.294 63.158 0.00 0.00 0.00 3.69
7218 8848 2.603473 CCGTCTCCACCTCCACCA 60.603 66.667 0.00 0.00 0.00 4.17
7290 8920 4.214327 CGCTCTCCTTCGCCTCCC 62.214 72.222 0.00 0.00 0.00 4.30
7361 8997 4.415150 ACCCTCGCCGACGACCTA 62.415 66.667 0.00 0.00 45.12 3.08
7402 9038 0.298707 CGTGATACGTGAGCATGTGC 59.701 55.000 0.00 0.00 36.74 4.57
7403 9039 2.063659 CGTGATACGTGAGCATGTGCT 61.064 52.381 7.31 7.31 45.31 4.40
7404 9040 3.554277 CGTGATACGTGAGCATGTGCTT 61.554 50.000 9.14 0.00 43.77 3.91
7414 9063 2.949714 GCATGTGCTTTCGCGTATAT 57.050 45.000 5.77 0.00 39.65 0.86
7421 9070 2.997303 TGCTTTCGCGTATATGTGTTGT 59.003 40.909 5.77 0.00 39.65 3.32
7432 9081 6.953743 GCGTATATGTGTTGTGAAACTTGTAG 59.046 38.462 0.00 0.00 38.04 2.74
7434 9083 8.869897 CGTATATGTGTTGTGAAACTTGTAGAT 58.130 33.333 0.00 0.00 38.04 1.98
7447 9096 7.443879 TGAAACTTGTAGATTGCATTGTAGACA 59.556 33.333 0.00 0.00 0.00 3.41
7459 9109 5.347635 TGCATTGTAGACATGTTCTCGTTAC 59.652 40.000 0.00 0.00 35.55 2.50
7495 9150 1.338674 TGGAGGCATTGGTACAGTTCG 60.339 52.381 0.00 0.00 42.39 3.95
7497 9152 2.093869 GGAGGCATTGGTACAGTTCGTA 60.094 50.000 0.00 0.00 42.39 3.43
7498 9153 3.431766 GGAGGCATTGGTACAGTTCGTAT 60.432 47.826 0.00 0.00 42.39 3.06
7499 9154 4.202182 GGAGGCATTGGTACAGTTCGTATA 60.202 45.833 0.00 0.00 42.39 1.47
7500 9155 5.510861 GGAGGCATTGGTACAGTTCGTATAT 60.511 44.000 0.00 0.00 42.39 0.86
7501 9156 5.539048 AGGCATTGGTACAGTTCGTATATC 58.461 41.667 0.00 0.00 42.39 1.63
7511 9167 6.525578 ACAGTTCGTATATCTCTGTTGGAA 57.474 37.500 0.00 0.00 36.17 3.53
7546 9203 7.475771 TTCAAGTGATTGTAAATTTGTTGCC 57.524 32.000 0.00 0.00 0.00 4.52
7548 9205 5.806654 AGTGATTGTAAATTTGTTGCCCT 57.193 34.783 0.00 0.00 0.00 5.19
7552 9209 4.657436 TTGTAAATTTGTTGCCCTCGTT 57.343 36.364 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 55 4.335315 CAGGAGTGCTTTTCTACACAACAA 59.665 41.667 0.00 0.00 39.30 2.83
78 82 3.782889 AAACAGTTGTCAAGCTTCCAC 57.217 42.857 0.00 0.00 0.00 4.02
260 268 0.461516 ATCCATGTGTGCTCGCTCAG 60.462 55.000 0.56 0.00 0.00 3.35
330 346 4.697828 TCAAAGTGCACTCAGTTGTACAAA 59.302 37.500 21.95 2.06 36.08 2.83
331 347 4.257731 TCAAAGTGCACTCAGTTGTACAA 58.742 39.130 21.95 3.59 36.08 2.41
416 527 5.962433 TGAAACAGAGTATAAAGGAGTCCG 58.038 41.667 2.76 0.00 0.00 4.79
455 566 5.109903 AGCTATCGGTTGAACATGTTAGAC 58.890 41.667 11.95 12.56 0.00 2.59
470 584 2.890808 TGGAGTAGCAAAGCTATCGG 57.109 50.000 1.68 0.00 43.30 4.18
512 626 9.930693 GAACCCTCTGATCGTCTATAAATATTT 57.069 33.333 5.89 5.89 0.00 1.40
513 627 9.315363 AGAACCCTCTGATCGTCTATAAATATT 57.685 33.333 0.00 0.00 0.00 1.28
514 628 8.887264 AGAACCCTCTGATCGTCTATAAATAT 57.113 34.615 0.00 0.00 0.00 1.28
515 629 9.803507 TTAGAACCCTCTGATCGTCTATAAATA 57.196 33.333 0.00 0.00 32.70 1.40
516 630 8.707796 TTAGAACCCTCTGATCGTCTATAAAT 57.292 34.615 0.00 0.00 32.70 1.40
517 631 8.529424 TTTAGAACCCTCTGATCGTCTATAAA 57.471 34.615 0.00 0.00 32.70 1.40
519 633 8.707796 ATTTTAGAACCCTCTGATCGTCTATA 57.292 34.615 0.00 0.00 32.70 1.31
520 634 7.604657 ATTTTAGAACCCTCTGATCGTCTAT 57.395 36.000 0.00 0.00 32.70 1.98
522 636 5.941555 ATTTTAGAACCCTCTGATCGTCT 57.058 39.130 0.00 0.00 32.70 4.18
523 637 5.692654 GCTATTTTAGAACCCTCTGATCGTC 59.307 44.000 0.00 0.00 32.70 4.20
525 639 4.991687 GGCTATTTTAGAACCCTCTGATCG 59.008 45.833 0.00 0.00 32.70 3.69
527 641 5.667626 TCTGGCTATTTTAGAACCCTCTGAT 59.332 40.000 0.00 0.00 32.70 2.90
529 643 5.119694 GTCTGGCTATTTTAGAACCCTCTG 58.880 45.833 0.00 0.00 32.70 3.35
530 644 4.783227 TGTCTGGCTATTTTAGAACCCTCT 59.217 41.667 0.00 0.00 35.52 3.69
531 645 5.099042 TGTCTGGCTATTTTAGAACCCTC 57.901 43.478 0.00 0.00 0.00 4.30
532 646 4.783227 TCTGTCTGGCTATTTTAGAACCCT 59.217 41.667 0.00 0.00 0.00 4.34
533 647 4.876679 GTCTGTCTGGCTATTTTAGAACCC 59.123 45.833 0.00 0.00 0.00 4.11
534 648 5.735766 AGTCTGTCTGGCTATTTTAGAACC 58.264 41.667 0.00 0.00 0.00 3.62
535 649 6.874134 TGAAGTCTGTCTGGCTATTTTAGAAC 59.126 38.462 0.00 0.00 0.00 3.01
536 650 7.004555 TGAAGTCTGTCTGGCTATTTTAGAA 57.995 36.000 0.00 0.00 0.00 2.10
537 651 6.605471 TGAAGTCTGTCTGGCTATTTTAGA 57.395 37.500 0.00 0.00 0.00 2.10
538 652 7.604164 TCTTTGAAGTCTGTCTGGCTATTTTAG 59.396 37.037 0.00 0.00 0.00 1.85
539 653 7.387948 GTCTTTGAAGTCTGTCTGGCTATTTTA 59.612 37.037 0.00 0.00 0.00 1.52
540 654 6.205658 GTCTTTGAAGTCTGTCTGGCTATTTT 59.794 38.462 0.00 0.00 0.00 1.82
541 655 5.703130 GTCTTTGAAGTCTGTCTGGCTATTT 59.297 40.000 0.00 0.00 0.00 1.40
542 656 5.012561 AGTCTTTGAAGTCTGTCTGGCTATT 59.987 40.000 0.00 0.00 0.00 1.73
543 657 4.530161 AGTCTTTGAAGTCTGTCTGGCTAT 59.470 41.667 0.00 0.00 0.00 2.97
544 658 3.898123 AGTCTTTGAAGTCTGTCTGGCTA 59.102 43.478 0.00 0.00 0.00 3.93
545 659 2.703007 AGTCTTTGAAGTCTGTCTGGCT 59.297 45.455 0.00 0.00 0.00 4.75
546 660 3.063485 GAGTCTTTGAAGTCTGTCTGGC 58.937 50.000 0.00 0.00 0.00 4.85
547 661 4.280677 AGAGAGTCTTTGAAGTCTGTCTGG 59.719 45.833 13.80 0.00 41.00 3.86
548 662 5.452078 AGAGAGTCTTTGAAGTCTGTCTG 57.548 43.478 13.80 0.00 41.00 3.51
549 663 6.478512 AAAGAGAGTCTTTGAAGTCTGTCT 57.521 37.500 10.36 10.36 44.34 3.41
560 674 3.067320 GCCAAACAGCAAAGAGAGTCTTT 59.933 43.478 0.00 0.00 46.75 2.52
561 675 2.620585 GCCAAACAGCAAAGAGAGTCTT 59.379 45.455 0.00 0.00 38.59 3.01
562 676 2.225467 GCCAAACAGCAAAGAGAGTCT 58.775 47.619 0.00 0.00 0.00 3.24
563 677 1.949525 TGCCAAACAGCAAAGAGAGTC 59.050 47.619 0.00 0.00 40.56 3.36
564 678 2.057137 TGCCAAACAGCAAAGAGAGT 57.943 45.000 0.00 0.00 40.56 3.24
586 700 2.034053 TGAAACATGAACCAAGAACGGC 59.966 45.455 0.00 0.00 0.00 5.68
588 702 6.208644 AGAAATGAAACATGAACCAAGAACG 58.791 36.000 0.00 0.00 0.00 3.95
594 708 8.408043 ACATTAGAGAAATGAAACATGAACCA 57.592 30.769 0.00 0.00 46.81 3.67
595 709 9.132521 CAACATTAGAGAAATGAAACATGAACC 57.867 33.333 0.00 0.00 46.81 3.62
596 710 8.642020 GCAACATTAGAGAAATGAAACATGAAC 58.358 33.333 0.00 0.00 46.81 3.18
597 711 8.579006 AGCAACATTAGAGAAATGAAACATGAA 58.421 29.630 0.00 0.00 46.81 2.57
598 712 8.114331 AGCAACATTAGAGAAATGAAACATGA 57.886 30.769 0.00 0.00 46.81 3.07
599 713 8.752766 AAGCAACATTAGAGAAATGAAACATG 57.247 30.769 4.82 0.00 46.81 3.21
600 714 8.800332 AGAAGCAACATTAGAGAAATGAAACAT 58.200 29.630 4.82 0.00 46.81 2.71
631 748 3.768757 TGATCCCGCCAATTTCAAGAATT 59.231 39.130 0.00 0.00 0.00 2.17
632 749 3.364549 TGATCCCGCCAATTTCAAGAAT 58.635 40.909 0.00 0.00 0.00 2.40
636 753 2.214376 ACTGATCCCGCCAATTTCAA 57.786 45.000 0.00 0.00 0.00 2.69
637 754 2.026729 TGTACTGATCCCGCCAATTTCA 60.027 45.455 0.00 0.00 0.00 2.69
638 755 2.639065 TGTACTGATCCCGCCAATTTC 58.361 47.619 0.00 0.00 0.00 2.17
639 756 2.799126 TGTACTGATCCCGCCAATTT 57.201 45.000 0.00 0.00 0.00 1.82
640 757 3.391296 ACTATGTACTGATCCCGCCAATT 59.609 43.478 0.00 0.00 0.00 2.32
641 758 2.972713 ACTATGTACTGATCCCGCCAAT 59.027 45.455 0.00 0.00 0.00 3.16
642 759 2.394632 ACTATGTACTGATCCCGCCAA 58.605 47.619 0.00 0.00 0.00 4.52
645 762 4.054780 TGAAACTATGTACTGATCCCGC 57.945 45.455 0.00 0.00 0.00 6.13
648 765 7.975750 GTTTCCTTGAAACTATGTACTGATCC 58.024 38.462 11.43 0.00 45.65 3.36
667 820 7.396339 GGAATAAACATTAGACCCTTGTTTCCT 59.604 37.037 3.76 0.00 41.34 3.36
669 824 7.544622 GGGAATAAACATTAGACCCTTGTTTC 58.455 38.462 3.76 0.00 41.34 2.78
673 828 5.296035 GTCGGGAATAAACATTAGACCCTTG 59.704 44.000 0.00 0.00 34.35 3.61
674 829 5.191124 AGTCGGGAATAAACATTAGACCCTT 59.809 40.000 0.00 0.00 34.35 3.95
677 832 5.695363 GCTAGTCGGGAATAAACATTAGACC 59.305 44.000 0.00 0.00 0.00 3.85
680 835 6.642950 CAGAGCTAGTCGGGAATAAACATTAG 59.357 42.308 0.00 0.00 0.00 1.73
690 845 1.304962 TGGCAGAGCTAGTCGGGAA 60.305 57.895 0.00 0.00 0.00 3.97
692 847 2.811101 CTGGCAGAGCTAGTCGGG 59.189 66.667 9.42 0.00 32.46 5.14
698 853 6.801718 TTAAACCTTATACTGGCAGAGCTA 57.198 37.500 23.66 3.30 0.00 3.32
705 860 7.683437 AGTCTGTTTTAAACCTTATACTGGC 57.317 36.000 5.32 0.00 0.00 4.85
711 866 8.974060 TGAGTGAAGTCTGTTTTAAACCTTAT 57.026 30.769 5.32 0.00 0.00 1.73
774 929 1.038130 TTCTAGTCTCCCTGCTCGGC 61.038 60.000 0.00 0.00 0.00 5.54
811 969 6.612049 ACCCTTTTTAAACACATCCCTAAACA 59.388 34.615 0.00 0.00 0.00 2.83
829 987 4.164843 TCTGCTTCAGTACAACCCTTTT 57.835 40.909 0.00 0.00 32.61 2.27
847 1005 9.463443 TCATCGTGTACATAATAATCACTTCTG 57.537 33.333 0.00 0.00 0.00 3.02
860 1018 7.488322 TGTCTTTCATCATCATCGTGTACATA 58.512 34.615 0.00 0.00 0.00 2.29
861 1019 6.340522 TGTCTTTCATCATCATCGTGTACAT 58.659 36.000 0.00 0.00 0.00 2.29
862 1020 5.719173 TGTCTTTCATCATCATCGTGTACA 58.281 37.500 0.00 0.00 0.00 2.90
863 1021 6.834959 ATGTCTTTCATCATCATCGTGTAC 57.165 37.500 0.00 0.00 29.76 2.90
864 1022 8.817100 GTTTATGTCTTTCATCATCATCGTGTA 58.183 33.333 0.00 0.00 37.91 2.90
865 1023 7.334171 TGTTTATGTCTTTCATCATCATCGTGT 59.666 33.333 0.00 0.00 37.91 4.49
866 1024 7.687445 TGTTTATGTCTTTCATCATCATCGTG 58.313 34.615 0.00 0.00 37.91 4.35
867 1025 7.848223 TGTTTATGTCTTTCATCATCATCGT 57.152 32.000 0.00 0.00 37.91 3.73
868 1026 9.003112 GTTTGTTTATGTCTTTCATCATCATCG 57.997 33.333 0.00 0.00 37.91 3.84
869 1027 9.844790 TGTTTGTTTATGTCTTTCATCATCATC 57.155 29.630 0.00 0.00 37.91 2.92
887 1045 9.185680 AGTAGGAGTAGAACATTTTGTTTGTTT 57.814 29.630 0.00 0.00 41.28 2.83
907 1065 0.105453 GGCTGGGATCAGGAGTAGGA 60.105 60.000 0.00 0.00 41.19 2.94
912 1070 0.979709 TGAGTGGCTGGGATCAGGAG 60.980 60.000 0.00 0.00 41.19 3.69
956 1137 4.662961 TGTCACGCACTCGGCCTG 62.663 66.667 0.00 0.00 40.31 4.85
960 1141 2.734723 CCACTGTCACGCACTCGG 60.735 66.667 0.00 0.00 40.69 4.63
963 1144 2.421739 GACCCACTGTCACGCACT 59.578 61.111 0.00 0.00 43.85 4.40
979 1160 2.273179 CCTCACACGAAGACCCCGA 61.273 63.158 0.00 0.00 0.00 5.14
990 1171 3.233355 GTGGGTCATCACCTCACAC 57.767 57.895 3.14 0.00 43.22 3.82
999 1180 2.044946 GCAGTGGGGTGGGTCATC 60.045 66.667 0.00 0.00 0.00 2.92
1000 1181 3.661648 GGCAGTGGGGTGGGTCAT 61.662 66.667 0.00 0.00 0.00 3.06
1001 1182 4.918360 AGGCAGTGGGGTGGGTCA 62.918 66.667 0.00 0.00 0.00 4.02
1002 1183 4.035102 GAGGCAGTGGGGTGGGTC 62.035 72.222 0.00 0.00 0.00 4.46
1011 1192 4.504916 CTCTCGGCCGAGGCAGTG 62.505 72.222 45.31 28.56 44.11 3.66
1016 1197 4.856607 GTTCGCTCTCGGCCGAGG 62.857 72.222 45.31 36.39 42.20 4.63
1017 1198 2.470362 TAGTTCGCTCTCGGCCGAG 61.470 63.158 42.89 42.89 43.21 4.63
1018 1199 2.437180 TAGTTCGCTCTCGGCCGA 60.437 61.111 29.03 29.03 37.74 5.54
1019 1200 2.278013 GTAGTTCGCTCTCGGCCG 60.278 66.667 22.12 22.12 37.74 6.13
1020 1201 2.104530 GGTAGTTCGCTCTCGGCC 59.895 66.667 0.00 0.00 37.74 6.13
1021 1202 2.104530 GGGTAGTTCGCTCTCGGC 59.895 66.667 0.00 0.00 36.13 5.54
1022 1203 1.651240 TTCGGGTAGTTCGCTCTCGG 61.651 60.000 0.00 0.00 36.13 4.63
1023 1204 0.522915 GTTCGGGTAGTTCGCTCTCG 60.523 60.000 0.00 0.00 0.00 4.04
1071 1252 4.544689 CGCGTGCGGAGAGGAGAG 62.545 72.222 6.30 0.00 35.56 3.20
1518 1699 3.458163 TCGACGGAGACCATGGGC 61.458 66.667 18.09 14.76 0.00 5.36
4128 4330 7.919690 ACATACGACCAACATATTTTGATCTG 58.080 34.615 3.10 0.00 0.00 2.90
4129 4331 9.778741 ATACATACGACCAACATATTTTGATCT 57.221 29.630 3.10 0.00 0.00 2.75
4130 4332 9.811655 CATACATACGACCAACATATTTTGATC 57.188 33.333 3.10 0.00 0.00 2.92
4131 4333 9.337396 ACATACATACGACCAACATATTTTGAT 57.663 29.630 3.10 0.00 0.00 2.57
4132 4334 8.725405 ACATACATACGACCAACATATTTTGA 57.275 30.769 3.10 0.00 0.00 2.69
4160 4362 3.525268 ACAAAACAACCTTCTGGCTTG 57.475 42.857 0.00 0.00 36.63 4.01
4170 4372 7.732664 AGACGAACGTAATATACAAAACAACC 58.267 34.615 0.00 0.00 0.00 3.77
4191 4393 5.173312 CGAGCACCATTTAATACAGTAGACG 59.827 44.000 0.00 0.00 0.00 4.18
4197 4399 4.634004 TGTTCCGAGCACCATTTAATACAG 59.366 41.667 0.00 0.00 0.00 2.74
4213 4415 3.207778 ACGATCCAAACTTTTGTTCCGA 58.792 40.909 11.28 0.00 42.67 4.55
4215 4417 5.688621 GGTTAACGATCCAAACTTTTGTTCC 59.311 40.000 0.00 0.00 42.67 3.62
4227 4429 2.159156 CGACATCAGGGTTAACGATCCA 60.159 50.000 0.00 0.00 0.00 3.41
4234 4436 3.262151 TGTTGATCCGACATCAGGGTTAA 59.738 43.478 0.00 0.00 0.00 2.01
4247 4449 1.372582 CTCCCATGTGTGTTGATCCG 58.627 55.000 0.00 0.00 0.00 4.18
4266 4468 7.598869 CCAAAAGAAGGTAGTAAATGAAAAGCC 59.401 37.037 0.00 0.00 0.00 4.35
4278 4480 7.768582 CCAAATCAAAAACCAAAAGAAGGTAGT 59.231 33.333 0.00 0.00 38.76 2.73
4279 4481 7.984617 TCCAAATCAAAAACCAAAAGAAGGTAG 59.015 33.333 0.00 0.00 38.76 3.18
4294 4496 1.268352 CGCGGGAGTTCCAAATCAAAA 59.732 47.619 0.00 0.00 37.91 2.44
4314 4516 4.424566 CACATGCGCACCTTGCCC 62.425 66.667 14.90 0.00 41.12 5.36
4316 4518 0.171007 AATACACATGCGCACCTTGC 59.829 50.000 14.90 0.00 40.69 4.01
4318 4520 1.739466 CAGAATACACATGCGCACCTT 59.261 47.619 14.90 0.00 0.00 3.50
4319 4521 1.372582 CAGAATACACATGCGCACCT 58.627 50.000 14.90 0.00 0.00 4.00
4320 4522 0.378257 CCAGAATACACATGCGCACC 59.622 55.000 14.90 0.00 0.00 5.01
4321 4523 1.086696 ACCAGAATACACATGCGCAC 58.913 50.000 14.90 0.00 0.00 5.34
4322 4524 1.085893 CACCAGAATACACATGCGCA 58.914 50.000 14.96 14.96 0.00 6.09
4374 4586 5.471556 TGGTACACAAGAAGGTCGATTTA 57.528 39.130 0.00 0.00 0.00 1.40
4378 4590 3.659786 CATTGGTACACAAGAAGGTCGA 58.340 45.455 0.00 0.00 43.48 4.20
4380 4592 2.488153 GGCATTGGTACACAAGAAGGTC 59.512 50.000 0.00 0.00 43.48 3.85
4383 4595 2.513753 TGGGCATTGGTACACAAGAAG 58.486 47.619 0.00 0.00 43.48 2.85
4394 4606 1.488390 ATTGTAGGCTTGGGCATTGG 58.512 50.000 0.00 0.00 40.87 3.16
4395 4607 2.496871 TGAATTGTAGGCTTGGGCATTG 59.503 45.455 0.00 0.00 40.87 2.82
4405 4617 7.325660 TCATTCAATCTTCTGAATTGTAGGC 57.674 36.000 4.25 0.00 42.16 3.93
4462 4674 7.556275 TCCAACCATTGATCTTGTAAATACCTC 59.444 37.037 0.00 0.00 0.00 3.85
4550 4815 5.295540 TGATCAAAAGATCACGAACACACAA 59.704 36.000 4.17 0.00 36.74 3.33
4557 4822 6.389091 CCCAAATTGATCAAAAGATCACGAA 58.611 36.000 13.09 0.00 40.84 3.85
4559 4824 4.563976 GCCCAAATTGATCAAAAGATCACG 59.436 41.667 13.09 0.00 40.84 4.35
4578 4843 1.553690 GGGTCTCAACTAGCAGCCCA 61.554 60.000 0.00 0.00 33.91 5.36
4581 4846 0.898320 TCTGGGTCTCAACTAGCAGC 59.102 55.000 0.00 0.00 0.00 5.25
4584 4849 1.205893 CCACTCTGGGTCTCAACTAGC 59.794 57.143 0.00 0.00 32.67 3.42
4606 4878 7.004086 TCTGGAATATAGGGCTAATTTTGTGG 58.996 38.462 0.00 0.00 0.00 4.17
4608 4880 7.816411 AGTCTGGAATATAGGGCTAATTTTGT 58.184 34.615 0.00 0.00 0.00 2.83
4637 4909 2.203337 CTGGTGGTGGTGGTGGTG 60.203 66.667 0.00 0.00 0.00 4.17
4638 4910 3.498071 CCTGGTGGTGGTGGTGGT 61.498 66.667 0.00 0.00 0.00 4.16
4639 4911 4.284550 CCCTGGTGGTGGTGGTGG 62.285 72.222 0.00 0.00 0.00 4.61
4658 4930 3.502595 GCACTACGATCTGTATAGCTCCA 59.497 47.826 0.00 0.00 32.81 3.86
4666 4938 1.399714 CCCAGGCACTACGATCTGTA 58.600 55.000 0.00 0.00 36.02 2.74
4715 4987 2.024414 AGTCGATTAATGGGCAAAGGC 58.976 47.619 4.83 0.00 40.13 4.35
4716 4988 3.016736 ACAGTCGATTAATGGGCAAAGG 58.983 45.455 4.83 0.00 0.00 3.11
4717 4989 4.155826 TGAACAGTCGATTAATGGGCAAAG 59.844 41.667 4.83 0.00 0.00 2.77
4720 4992 3.342377 TGAACAGTCGATTAATGGGCA 57.658 42.857 4.83 0.00 0.00 5.36
4814 5094 0.594602 CATGGTTGTCAGTGGCACAG 59.405 55.000 21.41 12.62 41.80 3.66
4816 5096 1.286880 GCATGGTTGTCAGTGGCAC 59.713 57.895 10.29 10.29 0.00 5.01
4832 5112 2.439409 CTCCTGGATGACATTGTTGCA 58.561 47.619 0.00 0.00 0.00 4.08
4834 5114 1.747355 GGCTCCTGGATGACATTGTTG 59.253 52.381 0.00 0.00 0.00 3.33
4838 5118 1.153086 GCGGCTCCTGGATGACATT 60.153 57.895 0.00 0.00 0.00 2.71
4865 5145 5.816258 GCTGCTCTGATGCATATATACATGT 59.184 40.000 2.69 2.69 42.48 3.21
4887 5167 5.280419 GGATCAGCAGATTAATTAGGGAGCT 60.280 44.000 0.00 0.00 33.72 4.09
4891 5171 7.251321 AGTAGGATCAGCAGATTAATTAGGG 57.749 40.000 0.00 0.00 33.72 3.53
4907 5187 8.012957 TCACCAAAGAGAGATTAAGTAGGATC 57.987 38.462 0.00 0.00 0.00 3.36
4931 5211 0.099436 GATGATGGTTGGCGCTGTTC 59.901 55.000 7.64 0.00 0.00 3.18
4937 5217 2.564771 AGTATGTGATGATGGTTGGCG 58.435 47.619 0.00 0.00 0.00 5.69
4950 5230 7.648112 ACGAATGTAGCATGTACTTAGTATGTG 59.352 37.037 0.00 0.00 0.00 3.21
4953 5233 7.713750 ACACGAATGTAGCATGTACTTAGTAT 58.286 34.615 0.00 0.00 37.26 2.12
4974 5254 7.757097 ATCTCTAAGTTTTGCTACATACACG 57.243 36.000 0.00 0.00 0.00 4.49
4977 5257 7.873505 CCCCTATCTCTAAGTTTTGCTACATAC 59.126 40.741 0.00 0.00 0.00 2.39
4990 5270 9.836179 AATATGGATATAGCCCCTATCTCTAAG 57.164 37.037 4.18 0.00 0.00 2.18
5084 5364 2.325484 TCAGTGCTGTGACCTTCCTTA 58.675 47.619 0.00 0.00 0.00 2.69
5085 5365 1.131638 TCAGTGCTGTGACCTTCCTT 58.868 50.000 0.00 0.00 0.00 3.36
5144 5432 9.460906 CACGAATCTCCTATACTTTAGGTTAAC 57.539 37.037 0.00 0.00 36.16 2.01
5152 5440 7.288560 TCTAGACCACGAATCTCCTATACTTT 58.711 38.462 0.00 0.00 0.00 2.66
5168 5456 3.490078 GCACAGCAGTAGATCTAGACCAC 60.490 52.174 1.64 0.00 0.00 4.16
5174 5462 2.102578 TGCAGCACAGCAGTAGATCTA 58.897 47.619 0.00 0.00 40.11 1.98
5190 5478 5.012664 TGGTGTACCCATATTACCTATGCAG 59.987 44.000 0.00 0.00 38.72 4.41
5209 5497 4.261741 GCACTCAATTTCATTGACTGGTGT 60.262 41.667 14.15 2.58 43.84 4.16
5257 5545 4.397417 CAGGCCCTCTTTACATCAAGAAAG 59.603 45.833 0.00 0.00 32.24 2.62
5267 5584 0.548510 ATCTGGCAGGCCCTCTTTAC 59.451 55.000 15.73 0.00 34.56 2.01
5377 5695 8.047310 ACAATTAATTTGGAACGGAGAGAGTAT 58.953 33.333 0.00 0.00 39.80 2.12
5378 5696 7.391620 ACAATTAATTTGGAACGGAGAGAGTA 58.608 34.615 0.00 0.00 39.80 2.59
5379 5697 6.238648 ACAATTAATTTGGAACGGAGAGAGT 58.761 36.000 0.00 0.00 39.80 3.24
5380 5698 6.455646 CGACAATTAATTTGGAACGGAGAGAG 60.456 42.308 0.00 0.00 39.80 3.20
5381 5699 5.350365 CGACAATTAATTTGGAACGGAGAGA 59.650 40.000 0.00 0.00 39.80 3.10
5382 5700 5.560148 CGACAATTAATTTGGAACGGAGAG 58.440 41.667 0.00 0.00 39.80 3.20
5383 5701 4.142773 GCGACAATTAATTTGGAACGGAGA 60.143 41.667 0.00 0.00 39.80 3.71
5384 5702 4.095610 GCGACAATTAATTTGGAACGGAG 58.904 43.478 0.00 0.00 39.80 4.63
5385 5703 3.754323 AGCGACAATTAATTTGGAACGGA 59.246 39.130 0.00 0.00 39.80 4.69
5386 5704 3.851403 CAGCGACAATTAATTTGGAACGG 59.149 43.478 0.00 0.00 39.80 4.44
5387 5705 4.717991 TCAGCGACAATTAATTTGGAACG 58.282 39.130 0.00 2.16 39.80 3.95
5388 5706 9.599322 CTATATCAGCGACAATTAATTTGGAAC 57.401 33.333 0.00 0.00 39.80 3.62
5389 5707 9.337396 ACTATATCAGCGACAATTAATTTGGAA 57.663 29.630 0.00 0.00 39.80 3.53
5390 5708 8.902540 ACTATATCAGCGACAATTAATTTGGA 57.097 30.769 0.00 0.00 39.80 3.53
5395 5713 9.982651 AGTTGTACTATATCAGCGACAATTAAT 57.017 29.630 0.00 0.00 36.39 1.40
5396 5714 9.811995 AAGTTGTACTATATCAGCGACAATTAA 57.188 29.630 0.00 0.00 36.39 1.40
5397 5715 9.811995 AAAGTTGTACTATATCAGCGACAATTA 57.188 29.630 0.00 0.00 36.39 1.40
5398 5716 8.604035 CAAAGTTGTACTATATCAGCGACAATT 58.396 33.333 0.00 0.00 36.39 2.32
5399 5717 7.764443 ACAAAGTTGTACTATATCAGCGACAAT 59.236 33.333 0.00 0.00 40.16 2.71
5400 5718 7.094631 ACAAAGTTGTACTATATCAGCGACAA 58.905 34.615 0.00 0.00 40.16 3.18
5401 5719 6.627243 ACAAAGTTGTACTATATCAGCGACA 58.373 36.000 0.00 0.00 40.16 4.35
5415 5733 7.658575 GTGTCCCTGATTTAGTACAAAGTTGTA 59.341 37.037 0.00 0.00 42.35 2.41
5416 5734 6.485648 GTGTCCCTGATTTAGTACAAAGTTGT 59.514 38.462 1.75 1.75 44.86 3.32
5417 5735 6.710744 AGTGTCCCTGATTTAGTACAAAGTTG 59.289 38.462 0.00 0.00 0.00 3.16
5418 5736 6.838382 AGTGTCCCTGATTTAGTACAAAGTT 58.162 36.000 0.00 0.00 0.00 2.66
5419 5737 6.435292 AGTGTCCCTGATTTAGTACAAAGT 57.565 37.500 0.00 0.00 0.00 2.66
5420 5738 6.934645 TCAAGTGTCCCTGATTTAGTACAAAG 59.065 38.462 0.00 0.00 0.00 2.77
5421 5739 6.833041 TCAAGTGTCCCTGATTTAGTACAAA 58.167 36.000 0.00 0.00 0.00 2.83
5422 5740 6.428083 TCAAGTGTCCCTGATTTAGTACAA 57.572 37.500 0.00 0.00 0.00 2.41
5423 5741 6.620877 ATCAAGTGTCCCTGATTTAGTACA 57.379 37.500 0.00 0.00 0.00 2.90
5424 5742 7.657761 CCATATCAAGTGTCCCTGATTTAGTAC 59.342 40.741 0.00 0.00 0.00 2.73
5425 5743 7.567250 TCCATATCAAGTGTCCCTGATTTAGTA 59.433 37.037 0.00 0.00 0.00 1.82
5426 5744 6.386927 TCCATATCAAGTGTCCCTGATTTAGT 59.613 38.462 0.00 0.00 0.00 2.24
5427 5745 6.830912 TCCATATCAAGTGTCCCTGATTTAG 58.169 40.000 0.00 0.00 0.00 1.85
5428 5746 6.823286 TCCATATCAAGTGTCCCTGATTTA 57.177 37.500 0.00 0.00 0.00 1.40
5429 5747 5.715439 TCCATATCAAGTGTCCCTGATTT 57.285 39.130 0.00 0.00 0.00 2.17
5430 5748 5.715439 TTCCATATCAAGTGTCCCTGATT 57.285 39.130 0.00 0.00 0.00 2.57
5431 5749 5.457197 CCATTCCATATCAAGTGTCCCTGAT 60.457 44.000 0.00 0.00 0.00 2.90
5432 5750 4.141413 CCATTCCATATCAAGTGTCCCTGA 60.141 45.833 0.00 0.00 0.00 3.86
5433 5751 4.139786 CCATTCCATATCAAGTGTCCCTG 58.860 47.826 0.00 0.00 0.00 4.45
5434 5752 4.047166 TCCATTCCATATCAAGTGTCCCT 58.953 43.478 0.00 0.00 0.00 4.20
5435 5753 4.392940 CTCCATTCCATATCAAGTGTCCC 58.607 47.826 0.00 0.00 0.00 4.46
5436 5754 4.392940 CCTCCATTCCATATCAAGTGTCC 58.607 47.826 0.00 0.00 0.00 4.02
5437 5755 4.103153 TCCCTCCATTCCATATCAAGTGTC 59.897 45.833 0.00 0.00 0.00 3.67
5438 5756 4.047166 TCCCTCCATTCCATATCAAGTGT 58.953 43.478 0.00 0.00 0.00 3.55
5439 5757 4.103785 ACTCCCTCCATTCCATATCAAGTG 59.896 45.833 0.00 0.00 0.00 3.16
5440 5758 4.310740 ACTCCCTCCATTCCATATCAAGT 58.689 43.478 0.00 0.00 0.00 3.16
5441 5759 4.989875 ACTCCCTCCATTCCATATCAAG 57.010 45.455 0.00 0.00 0.00 3.02
5442 5760 5.726560 TCTACTCCCTCCATTCCATATCAA 58.273 41.667 0.00 0.00 0.00 2.57
5443 5761 5.354184 TCTACTCCCTCCATTCCATATCA 57.646 43.478 0.00 0.00 0.00 2.15
5444 5762 7.129425 ACTATCTACTCCCTCCATTCCATATC 58.871 42.308 0.00 0.00 0.00 1.63
5445 5763 7.062584 ACTATCTACTCCCTCCATTCCATAT 57.937 40.000 0.00 0.00 0.00 1.78
5446 5764 6.485388 ACTATCTACTCCCTCCATTCCATA 57.515 41.667 0.00 0.00 0.00 2.74
5447 5765 5.361630 ACTATCTACTCCCTCCATTCCAT 57.638 43.478 0.00 0.00 0.00 3.41
5448 5766 4.834406 ACTATCTACTCCCTCCATTCCA 57.166 45.455 0.00 0.00 0.00 3.53
5449 5767 7.800300 ATTTACTATCTACTCCCTCCATTCC 57.200 40.000 0.00 0.00 0.00 3.01
5472 5790 8.355169 CCAAAAATGCTGCTACATCAACTATAT 58.645 33.333 0.00 0.00 0.00 0.86
5477 5795 4.559153 ACCAAAAATGCTGCTACATCAAC 58.441 39.130 0.00 0.00 0.00 3.18
5489 5807 9.328721 GAAAAATACAGCAATAACCAAAAATGC 57.671 29.630 0.00 0.00 37.28 3.56
5515 5833 3.624861 AGAAAATGGATCAGCGCTAACTG 59.375 43.478 10.99 0.00 39.12 3.16
5533 5851 4.469586 TCCTGGATATGCAGTACACAGAAA 59.530 41.667 21.19 0.00 0.00 2.52
5540 5858 5.221722 TGGAGATTTCCTGGATATGCAGTAC 60.222 44.000 21.19 4.73 44.36 2.73
5560 5878 2.170187 AGGAAGATTGCTAGCTGTGGAG 59.830 50.000 17.23 0.00 0.00 3.86
5614 5932 3.262420 GCTCAGTTTAAGAGATTCGCCA 58.738 45.455 0.00 0.00 35.09 5.69
5707 6025 0.320247 GCTCATCTGATACCTGGGCG 60.320 60.000 0.00 0.00 0.00 6.13
5722 6040 3.578282 TGATGTCTCAGGTTTACAGCTCA 59.422 43.478 0.00 0.00 31.06 4.26
5729 6047 9.685276 ATTAATTGTCATGATGTCTCAGGTTTA 57.315 29.630 0.00 0.00 34.79 2.01
5752 6070 9.515226 AGAGTATGTTAAAAGCAGGACAAATTA 57.485 29.630 0.00 0.00 0.00 1.40
5759 6077 5.865085 ACACAGAGTATGTTAAAAGCAGGA 58.135 37.500 0.00 0.00 41.41 3.86
5777 6095 6.183360 TGCAAGTTCCTAAGTAAACAACACAG 60.183 38.462 0.00 0.00 0.00 3.66
5783 6101 3.818773 GGCTGCAAGTTCCTAAGTAAACA 59.181 43.478 0.50 0.00 35.30 2.83
5788 6106 0.771127 TGGGCTGCAAGTTCCTAAGT 59.229 50.000 0.50 0.00 35.30 2.24
5791 6109 0.698238 ATGTGGGCTGCAAGTTCCTA 59.302 50.000 0.50 0.00 35.30 2.94
5811 6129 2.012937 TATTAACAACCACCTCGCCG 57.987 50.000 0.00 0.00 0.00 6.46
5814 6132 5.560966 AGCATTTATTAACAACCACCTCG 57.439 39.130 0.00 0.00 0.00 4.63
5982 6300 4.778958 AGCAGATCATCCCAATTTTCCAAA 59.221 37.500 0.00 0.00 0.00 3.28
5997 6315 2.868964 AGTTAGGGGGTAGCAGATCA 57.131 50.000 0.00 0.00 0.00 2.92
6051 6369 5.443261 CGCGCTGAATATATGTTTGTCATT 58.557 37.500 5.56 0.00 37.91 2.57
6075 6393 3.495670 AGATCTTTTCCACTCGACGAG 57.504 47.619 22.97 22.97 35.52 4.18
6084 6402 7.461749 ACTTGTCCTGATAAAGATCTTTTCCA 58.538 34.615 25.02 19.85 34.23 3.53
6112 6430 5.659971 AGCCTTTTTGCTTGATATTCTCCAT 59.340 36.000 0.00 0.00 38.85 3.41
6117 6435 6.199937 TCAGAGCCTTTTTGCTTGATATTC 57.800 37.500 0.00 0.00 42.95 1.75
6120 6438 4.082571 GCTTCAGAGCCTTTTTGCTTGATA 60.083 41.667 0.00 0.00 42.95 2.15
6168 6486 9.877178 GTTTTCTTATCTTCATCCTCTCTTACA 57.123 33.333 0.00 0.00 0.00 2.41
6207 6525 1.610379 ATGCTTTGAAGGGGGCCAC 60.610 57.895 4.39 0.00 0.00 5.01
6213 6531 1.325476 GGGGCTCATGCTTTGAAGGG 61.325 60.000 0.00 0.00 39.59 3.95
6252 6570 1.228398 TGGAACATTCGGCTGCCAA 60.228 52.632 20.29 12.33 0.00 4.52
6267 6585 0.035598 TTGGAGACGCCGAAAATGGA 59.964 50.000 0.00 0.00 40.66 3.41
6484 6802 0.319641 GGATAAGACGATGACCCGGC 60.320 60.000 0.00 0.00 37.97 6.13
6495 6813 2.286872 TCACGACTCCTCGGATAAGAC 58.713 52.381 0.00 0.00 44.80 3.01
6529 6847 1.909700 GACAGAAAGTCCATGCCCAA 58.090 50.000 0.00 0.00 41.56 4.12
6558 6876 3.995506 ATCCCCGGCGCTCCTTTTG 62.996 63.158 7.64 0.00 0.00 2.44
6826 7146 4.395854 TGTAGATTGTGTAGGCAATGCAAG 59.604 41.667 7.79 0.00 38.98 4.01
6838 7159 5.221048 GCTGTTTTCTTGGTGTAGATTGTGT 60.221 40.000 0.00 0.00 0.00 3.72
6914 7236 9.638176 AAAATGAGGCAAATCTCTGTATTAGAT 57.362 29.630 0.00 0.00 35.17 1.98
6942 7264 6.993079 TCAACTGCATCTCTGTACTAGAAAA 58.007 36.000 0.00 0.00 34.32 2.29
6943 7265 6.209589 ACTCAACTGCATCTCTGTACTAGAAA 59.790 38.462 0.00 0.00 34.32 2.52
6945 7267 5.257262 ACTCAACTGCATCTCTGTACTAGA 58.743 41.667 0.00 0.00 0.00 2.43
6946 7268 5.574891 ACTCAACTGCATCTCTGTACTAG 57.425 43.478 0.00 0.00 0.00 2.57
6947 7269 5.984695 AACTCAACTGCATCTCTGTACTA 57.015 39.130 0.00 0.00 0.00 1.82
6948 7270 4.881019 AACTCAACTGCATCTCTGTACT 57.119 40.909 0.00 0.00 0.00 2.73
6949 7271 4.991056 TGAAACTCAACTGCATCTCTGTAC 59.009 41.667 0.00 0.00 0.00 2.90
6950 7272 5.213891 TGAAACTCAACTGCATCTCTGTA 57.786 39.130 0.00 0.00 0.00 2.74
6951 7273 4.077300 TGAAACTCAACTGCATCTCTGT 57.923 40.909 0.00 0.00 0.00 3.41
6953 7275 3.501445 GCTTGAAACTCAACTGCATCTCT 59.499 43.478 0.00 0.00 32.21 3.10
6954 7276 3.251729 TGCTTGAAACTCAACTGCATCTC 59.748 43.478 0.00 0.00 34.15 2.75
6955 7277 3.216800 TGCTTGAAACTCAACTGCATCT 58.783 40.909 0.00 0.00 34.15 2.90
6957 7279 3.216800 TCTGCTTGAAACTCAACTGCAT 58.783 40.909 4.41 0.00 37.08 3.96
6959 7281 3.698029 TTCTGCTTGAAACTCAACTGC 57.302 42.857 0.00 0.00 32.21 4.40
6960 7282 6.358030 CGTATTTTCTGCTTGAAACTCAACTG 59.642 38.462 5.24 0.00 43.55 3.16
6961 7283 6.430451 CGTATTTTCTGCTTGAAACTCAACT 58.570 36.000 5.24 0.00 43.55 3.16
6970 8573 3.410631 TCACCCGTATTTTCTGCTTGA 57.589 42.857 0.00 0.00 0.00 3.02
6979 8582 2.820787 TGGCGATTTTTCACCCGTATTT 59.179 40.909 0.00 0.00 0.00 1.40
6985 8588 0.894835 ACCATGGCGATTTTTCACCC 59.105 50.000 13.04 0.00 0.00 4.61
6988 8591 3.311486 GGAAACCATGGCGATTTTTCA 57.689 42.857 20.37 0.00 0.00 2.69
7007 8610 1.066215 GGCTTTAGCATGTTTTGGGGG 60.066 52.381 3.88 0.00 44.36 5.40
7008 8611 1.404047 CGGCTTTAGCATGTTTTGGGG 60.404 52.381 3.88 0.00 44.36 4.96
7011 8614 2.030363 TGTCCGGCTTTAGCATGTTTTG 60.030 45.455 0.00 0.00 44.36 2.44
7012 8615 2.235016 TGTCCGGCTTTAGCATGTTTT 58.765 42.857 0.00 0.00 44.36 2.43
7013 8616 1.904287 TGTCCGGCTTTAGCATGTTT 58.096 45.000 0.00 0.00 44.36 2.83
7014 8617 1.539827 GTTGTCCGGCTTTAGCATGTT 59.460 47.619 0.00 0.00 44.36 2.71
7015 8618 1.165270 GTTGTCCGGCTTTAGCATGT 58.835 50.000 0.00 0.00 44.36 3.21
7016 8619 1.131126 CAGTTGTCCGGCTTTAGCATG 59.869 52.381 0.00 0.00 44.36 4.06
7017 8620 1.271379 ACAGTTGTCCGGCTTTAGCAT 60.271 47.619 0.00 0.00 44.36 3.79
7018 8621 0.107831 ACAGTTGTCCGGCTTTAGCA 59.892 50.000 0.00 0.00 44.36 3.49
7019 8622 1.069227 CAACAGTTGTCCGGCTTTAGC 60.069 52.381 4.99 0.00 41.14 3.09
7020 8623 2.489971 TCAACAGTTGTCCGGCTTTAG 58.510 47.619 13.14 0.00 0.00 1.85
7021 8624 2.623878 TCAACAGTTGTCCGGCTTTA 57.376 45.000 13.14 0.00 0.00 1.85
7022 8625 1.676006 CTTCAACAGTTGTCCGGCTTT 59.324 47.619 13.14 0.00 0.00 3.51
7023 8626 1.308998 CTTCAACAGTTGTCCGGCTT 58.691 50.000 13.14 0.00 0.00 4.35
7024 8627 0.180406 ACTTCAACAGTTGTCCGGCT 59.820 50.000 13.14 0.00 27.32 5.52
7025 8628 0.307760 CACTTCAACAGTTGTCCGGC 59.692 55.000 13.14 0.00 30.92 6.13
7026 8629 1.663695 ACACTTCAACAGTTGTCCGG 58.336 50.000 13.14 0.00 30.92 5.14
7027 8630 4.868450 TTTACACTTCAACAGTTGTCCG 57.132 40.909 13.14 5.61 30.92 4.79
7028 8631 6.199393 GTGATTTACACTTCAACAGTTGTCC 58.801 40.000 13.14 0.00 45.13 4.02
7043 8646 9.605275 TTCAAATTTGTCCAATTGTGATTTACA 57.395 25.926 17.47 0.00 35.09 2.41
7047 8671 6.711645 CCCTTCAAATTTGTCCAATTGTGATT 59.288 34.615 17.47 0.00 35.09 2.57
7054 8678 2.305635 GGGCCCTTCAAATTTGTCCAAT 59.694 45.455 17.04 0.00 0.00 3.16
7058 8682 3.138304 GTTTGGGCCCTTCAAATTTGTC 58.862 45.455 25.70 0.00 36.64 3.18
7072 8696 2.623718 GCGTTTTTGCGTTTGGGC 59.376 55.556 0.00 0.00 0.00 5.36
7145 8769 4.761058 AGAGCGGCGAGGGAAGGA 62.761 66.667 12.98 0.00 0.00 3.36
7146 8770 4.214327 GAGAGCGGCGAGGGAAGG 62.214 72.222 12.98 0.00 0.00 3.46
7147 8771 4.214327 GGAGAGCGGCGAGGGAAG 62.214 72.222 12.98 0.00 0.00 3.46
7229 8859 2.726351 GCGGTGGAGGAAGAGGAGG 61.726 68.421 0.00 0.00 0.00 4.30
7401 9037 7.838812 GTTTCACAACACATATACGCGAAAGC 61.839 42.308 15.93 0.00 42.74 3.51
7402 9038 4.833469 TCACAACACATATACGCGAAAG 57.167 40.909 15.93 0.00 0.00 2.62
7403 9039 5.177881 AGTTTCACAACACATATACGCGAAA 59.822 36.000 15.93 0.00 35.05 3.46
7404 9040 4.687018 AGTTTCACAACACATATACGCGAA 59.313 37.500 15.93 0.00 35.05 4.70
7414 9063 5.124617 TGCAATCTACAAGTTTCACAACACA 59.875 36.000 0.00 0.00 35.05 3.72
7421 9070 7.443879 TGTCTACAATGCAATCTACAAGTTTCA 59.556 33.333 0.00 0.00 0.00 2.69
7432 9081 5.063944 ACGAGAACATGTCTACAATGCAATC 59.936 40.000 0.00 0.00 36.41 2.67
7434 9083 4.314961 ACGAGAACATGTCTACAATGCAA 58.685 39.130 0.00 0.00 36.41 4.08
7447 9096 1.000506 ACACGCCAGTAACGAGAACAT 59.999 47.619 0.00 0.00 0.00 2.71
7474 9124 2.359900 GAACTGTACCAATGCCTCCAG 58.640 52.381 0.00 0.00 0.00 3.86
7521 9178 7.173047 GGGCAACAAATTTACAATCACTTGAAT 59.827 33.333 0.00 0.00 35.43 2.57
7522 9179 6.481644 GGGCAACAAATTTACAATCACTTGAA 59.518 34.615 0.00 0.00 35.43 2.69
7523 9180 5.988561 GGGCAACAAATTTACAATCACTTGA 59.011 36.000 0.00 0.00 35.43 3.02
7525 9182 6.173427 AGGGCAACAAATTTACAATCACTT 57.827 33.333 0.00 0.00 39.74 3.16
7527 9184 4.621034 CGAGGGCAACAAATTTACAATCAC 59.379 41.667 0.00 0.00 39.74 3.06
7530 9187 4.864704 ACGAGGGCAACAAATTTACAAT 57.135 36.364 0.00 0.00 39.74 2.71
7531 9188 4.142138 ACAACGAGGGCAACAAATTTACAA 60.142 37.500 0.00 0.00 39.74 2.41
7532 9189 3.381908 ACAACGAGGGCAACAAATTTACA 59.618 39.130 0.00 0.00 39.74 2.41
7533 9190 3.972403 ACAACGAGGGCAACAAATTTAC 58.028 40.909 0.00 0.00 39.74 2.01
7534 9191 4.657436 AACAACGAGGGCAACAAATTTA 57.343 36.364 0.00 0.00 39.74 1.40
7535 9192 3.535280 AACAACGAGGGCAACAAATTT 57.465 38.095 0.00 0.00 39.74 1.82
7536 9193 3.535280 AAACAACGAGGGCAACAAATT 57.465 38.095 0.00 0.00 39.74 1.82
7537 9194 3.535280 AAAACAACGAGGGCAACAAAT 57.465 38.095 0.00 0.00 39.74 2.32
7538 9195 3.254892 GAAAAACAACGAGGGCAACAAA 58.745 40.909 0.00 0.00 39.74 2.83
7539 9196 2.231478 TGAAAAACAACGAGGGCAACAA 59.769 40.909 0.00 0.00 39.74 2.83
7546 9203 2.425668 ACCAACCTGAAAAACAACGAGG 59.574 45.455 0.00 0.00 0.00 4.63
7548 9205 3.082548 TCACCAACCTGAAAAACAACGA 58.917 40.909 0.00 0.00 0.00 3.85
7552 9209 2.383855 CCCTCACCAACCTGAAAAACA 58.616 47.619 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.