Multiple sequence alignment - TraesCS4A01G041300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G041300 chr4A 100.000 4685 0 0 1 4685 34676791 34681475 0.000000e+00 8652.0
1 TraesCS4A01G041300 chr4A 86.491 644 65 14 309 947 617110002 617110628 0.000000e+00 688.0
2 TraesCS4A01G041300 chr4A 87.713 586 54 6 309 876 494480382 494480967 0.000000e+00 667.0
3 TraesCS4A01G041300 chr4A 87.442 430 48 5 1 425 494480228 494480656 1.510000e-134 490.0
4 TraesCS4A01G041300 chr4A 87.383 428 51 3 1 425 617109848 617110275 5.450000e-134 488.0
5 TraesCS4A01G041300 chr6A 99.914 1158 1 0 1559 2716 499864363 499865520 0.000000e+00 2134.0
6 TraesCS4A01G041300 chr6A 99.914 1157 1 0 1559 2715 499863953 499862797 0.000000e+00 2132.0
7 TraesCS4A01G041300 chr6A 86.417 427 55 3 1 425 569404675 569405100 9.180000e-127 464.0
8 TraesCS4A01G041300 chr6A 89.136 359 36 3 309 665 569404828 569405185 1.200000e-120 444.0
9 TraesCS4A01G041300 chr6A 82.133 375 43 17 605 968 569405182 569405543 2.740000e-77 300.0
10 TraesCS4A01G041300 chr6A 84.099 283 32 8 1150 1425 602717654 602717378 1.290000e-65 261.0
11 TraesCS4A01G041300 chr6A 86.441 59 7 1 741 798 609388547 609388605 3.910000e-06 63.9
12 TraesCS4A01G041300 chr1B 99.913 1151 1 0 1567 2717 420414148 420412998 0.000000e+00 2121.0
13 TraesCS4A01G041300 chr1B 91.713 712 55 4 3956 4665 645901267 645900558 0.000000e+00 985.0
14 TraesCS4A01G041300 chr1B 84.730 537 55 12 309 829 62027441 62026916 3.230000e-141 512.0
15 TraesCS4A01G041300 chr1B 86.183 427 57 2 1 425 62027595 62027169 1.190000e-125 460.0
16 TraesCS4A01G041300 chr5A 99.483 1161 6 0 1556 2716 1723854 1722694 0.000000e+00 2111.0
17 TraesCS4A01G041300 chr5A 83.399 1012 112 39 3 968 572037031 572038032 0.000000e+00 887.0
18 TraesCS4A01G041300 chr7A 99.225 1161 5 1 1560 2716 19171513 19170353 0.000000e+00 2091.0
19 TraesCS4A01G041300 chr7A 84.628 618 42 28 1560 2136 226549178 226549783 2.450000e-157 566.0
20 TraesCS4A01G041300 chr7A 93.233 266 16 1 2414 2679 226550278 226550541 1.580000e-104 390.0
21 TraesCS4A01G041300 chr7A 82.258 434 49 16 1143 1559 31693436 31693858 2.680000e-92 350.0
22 TraesCS4A01G041300 chr7A 79.427 384 38 13 1181 1559 31574543 31574196 2.820000e-57 233.0
23 TraesCS4A01G041300 chr7A 76.364 495 75 24 3224 3680 31687401 31687891 1.310000e-55 228.0
24 TraesCS4A01G041300 chr7A 79.233 313 46 13 1126 1437 31686661 31686955 2.860000e-47 200.0
25 TraesCS4A01G041300 chr7A 80.309 259 39 11 3434 3683 31581998 31581743 8.010000e-43 185.0
26 TraesCS4A01G041300 chr7A 84.848 165 14 5 2128 2288 226549835 226549992 6.280000e-34 156.0
27 TraesCS4A01G041300 chr7A 89.623 106 11 0 2300 2405 226550124 226550229 8.180000e-28 135.0
28 TraesCS4A01G041300 chr7A 86.207 116 13 2 3078 3192 423278085 423277972 6.370000e-24 122.0
29 TraesCS4A01G041300 chr4D 90.745 1275 70 26 2715 3966 433365898 433367147 0.000000e+00 1657.0
30 TraesCS4A01G041300 chr4D 94.828 580 15 7 984 1559 433365338 433365906 0.000000e+00 891.0
31 TraesCS4A01G041300 chr4D 85.681 426 54 2 1 425 152888994 152888575 4.300000e-120 442.0
32 TraesCS4A01G041300 chr4D 88.417 259 24 6 727 981 353863900 353863644 1.640000e-79 307.0
33 TraesCS4A01G041300 chr4D 91.257 183 14 2 787 968 40174739 40174558 1.010000e-61 248.0
34 TraesCS4A01G041300 chr4D 100.000 31 0 0 3971 4001 359859916 359859886 1.820000e-04 58.4
35 TraesCS4A01G041300 chr4B 90.244 1148 69 17 2715 3831 531479527 531480662 0.000000e+00 1459.0
36 TraesCS4A01G041300 chr4B 92.548 577 25 4 984 1559 531478976 531479535 0.000000e+00 811.0
37 TraesCS4A01G041300 chr4B 90.476 189 13 4 784 968 58766444 58766257 1.300000e-60 244.0
38 TraesCS4A01G041300 chr4B 91.667 84 6 1 3835 3918 531486511 531486593 1.070000e-21 115.0
39 TraesCS4A01G041300 chr5B 92.176 703 51 4 3965 4665 526445054 526444354 0.000000e+00 990.0
40 TraesCS4A01G041300 chr2A 91.221 729 48 5 3969 4685 541798846 541798122 0.000000e+00 977.0
41 TraesCS4A01G041300 chr2A 91.176 102 6 2 1706 1807 448380778 448380680 8.180000e-28 135.0
42 TraesCS4A01G041300 chr2A 87.387 111 12 1 3078 3188 742722242 742722134 4.920000e-25 126.0
43 TraesCS4A01G041300 chr2A 81.410 156 20 7 3041 3191 65998612 65998763 8.240000e-23 119.0
44 TraesCS4A01G041300 chr6B 87.264 848 71 13 1 829 602480118 602480947 0.000000e+00 933.0
45 TraesCS4A01G041300 chr6B 86.553 409 54 1 309 716 534978780 534979188 2.570000e-122 449.0
46 TraesCS4A01G041300 chr6B 93.421 228 13 2 742 968 534979980 534980206 2.090000e-88 337.0
47 TraesCS4A01G041300 chr6B 79.487 156 26 5 3967 4118 30454100 30453947 6.410000e-19 106.0
48 TraesCS4A01G041300 chr6B 88.136 59 6 1 741 798 705167769 705167827 8.410000e-08 69.4
49 TraesCS4A01G041300 chr3D 87.624 606 68 6 1 601 31750276 31750879 0.000000e+00 697.0
50 TraesCS4A01G041300 chr2B 91.485 458 37 2 4209 4665 78096008 78095552 3.080000e-176 628.0
51 TraesCS4A01G041300 chr2B 89.474 247 23 3 3969 4213 78097772 78097527 4.550000e-80 309.0
52 TraesCS4A01G041300 chr3A 90.421 428 26 7 1705 2123 700075430 700075009 2.460000e-152 549.0
53 TraesCS4A01G041300 chr3A 86.620 426 54 3 1 425 351706800 351706377 7.100000e-128 468.0
54 TraesCS4A01G041300 chr3A 93.750 304 15 1 2414 2717 700074486 700074187 1.990000e-123 453.0
55 TraesCS4A01G041300 chr3A 89.045 356 33 6 312 665 351706643 351706292 2.000000e-118 436.0
56 TraesCS4A01G041300 chr3A 89.873 237 18 5 733 968 351706165 351705934 2.740000e-77 300.0
57 TraesCS4A01G041300 chr3A 90.446 157 9 4 2137 2288 700074926 700074771 7.950000e-48 202.0
58 TraesCS4A01G041300 chr3A 81.046 153 20 7 3971 4118 655856624 655856772 3.830000e-21 113.0
59 TraesCS4A01G041300 chr3A 100.000 35 0 0 1601 1635 700075803 700075769 1.090000e-06 65.8
60 TraesCS4A01G041300 chr7D 89.415 359 35 3 309 665 135778505 135778148 2.570000e-122 449.0
61 TraesCS4A01G041300 chr7D 90.244 246 18 5 732 975 135778022 135777781 2.720000e-82 316.0
62 TraesCS4A01G041300 chr7D 89.552 67 4 1 1496 1559 31118092 31118158 1.080000e-11 82.4
63 TraesCS4A01G041300 chr1D 89.796 343 19 11 1803 2136 3858044 3858379 4.330000e-115 425.0
64 TraesCS4A01G041300 chr1D 92.544 228 17 0 2414 2641 3858883 3859110 1.260000e-85 327.0
65 TraesCS4A01G041300 chr1D 93.810 210 10 2 1597 1806 3857811 3858017 3.520000e-81 313.0
66 TraesCS4A01G041300 chr1D 84.118 170 14 4 2123 2288 3858429 3858589 8.120000e-33 152.0
67 TraesCS4A01G041300 chr1D 89.091 110 8 3 2300 2405 3858720 3858829 2.940000e-27 134.0
68 TraesCS4A01G041300 chr1D 87.719 114 11 2 3078 3191 19880216 19880326 3.800000e-26 130.0
69 TraesCS4A01G041300 chr3B 88.953 344 25 10 1803 2136 800929884 800930224 3.370000e-111 412.0
70 TraesCS4A01G041300 chr3B 93.103 261 15 2 2414 2671 800930720 800930980 3.420000e-101 379.0
71 TraesCS4A01G041300 chr3B 88.690 168 16 2 2123 2288 800930268 800930434 7.950000e-48 202.0
72 TraesCS4A01G041300 chr3B 92.523 107 7 1 2300 2405 800930565 800930671 8.120000e-33 152.0
73 TraesCS4A01G041300 chr3B 87.387 111 12 1 3078 3188 251650569 251650677 4.920000e-25 126.0
74 TraesCS4A01G041300 chr6D 85.302 381 38 12 605 968 24596988 24596609 1.230000e-100 377.0
75 TraesCS4A01G041300 chr6D 81.661 289 39 9 1150 1431 455907744 455907463 1.310000e-55 228.0
76 TraesCS4A01G041300 chr5D 90.310 258 17 4 1181 1437 34063953 34064203 9.720000e-87 331.0
77 TraesCS4A01G041300 chr5D 86.765 68 9 0 1370 1437 24915430 24915497 5.030000e-10 76.8
78 TraesCS4A01G041300 chrUn 75.132 567 113 11 3275 3822 287417737 287418294 1.680000e-59 241.0
79 TraesCS4A01G041300 chrUn 75.132 567 113 11 3275 3822 295022163 295021606 1.680000e-59 241.0
80 TraesCS4A01G041300 chrUn 86.842 114 12 2 3078 3191 81477692 81477802 1.770000e-24 124.0
81 TraesCS4A01G041300 chrUn 93.750 48 2 1 1512 1559 287417361 287417407 2.340000e-08 71.3
82 TraesCS4A01G041300 chrUn 95.556 45 1 1 1515 1559 295022536 295022493 2.340000e-08 71.3
83 TraesCS4A01G041300 chr2D 86.087 115 14 1 3078 3192 134301541 134301653 6.370000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G041300 chr4A 34676791 34681475 4684 False 8652.000000 8652 100.000000 1 4685 1 chr4A.!!$F1 4684
1 TraesCS4A01G041300 chr4A 617109848 617110628 780 False 588.000000 688 86.937000 1 947 2 chr4A.!!$F3 946
2 TraesCS4A01G041300 chr4A 494480228 494480967 739 False 578.500000 667 87.577500 1 876 2 chr4A.!!$F2 875
3 TraesCS4A01G041300 chr6A 499864363 499865520 1157 False 2134.000000 2134 99.914000 1559 2716 1 chr6A.!!$F1 1157
4 TraesCS4A01G041300 chr6A 499862797 499863953 1156 True 2132.000000 2132 99.914000 1559 2715 1 chr6A.!!$R1 1156
5 TraesCS4A01G041300 chr6A 569404675 569405543 868 False 402.666667 464 85.895333 1 968 3 chr6A.!!$F3 967
6 TraesCS4A01G041300 chr1B 420412998 420414148 1150 True 2121.000000 2121 99.913000 1567 2717 1 chr1B.!!$R1 1150
7 TraesCS4A01G041300 chr1B 645900558 645901267 709 True 985.000000 985 91.713000 3956 4665 1 chr1B.!!$R2 709
8 TraesCS4A01G041300 chr1B 62026916 62027595 679 True 486.000000 512 85.456500 1 829 2 chr1B.!!$R3 828
9 TraesCS4A01G041300 chr5A 1722694 1723854 1160 True 2111.000000 2111 99.483000 1556 2716 1 chr5A.!!$R1 1160
10 TraesCS4A01G041300 chr5A 572037031 572038032 1001 False 887.000000 887 83.399000 3 968 1 chr5A.!!$F1 965
11 TraesCS4A01G041300 chr7A 19170353 19171513 1160 True 2091.000000 2091 99.225000 1560 2716 1 chr7A.!!$R1 1156
12 TraesCS4A01G041300 chr7A 226549178 226550541 1363 False 311.750000 566 88.083000 1560 2679 4 chr7A.!!$F3 1119
13 TraesCS4A01G041300 chr7A 31686661 31687891 1230 False 214.000000 228 77.798500 1126 3680 2 chr7A.!!$F2 2554
14 TraesCS4A01G041300 chr4D 433365338 433367147 1809 False 1274.000000 1657 92.786500 984 3966 2 chr4D.!!$F1 2982
15 TraesCS4A01G041300 chr4B 531478976 531480662 1686 False 1135.000000 1459 91.396000 984 3831 2 chr4B.!!$F2 2847
16 TraesCS4A01G041300 chr5B 526444354 526445054 700 True 990.000000 990 92.176000 3965 4665 1 chr5B.!!$R1 700
17 TraesCS4A01G041300 chr2A 541798122 541798846 724 True 977.000000 977 91.221000 3969 4685 1 chr2A.!!$R2 716
18 TraesCS4A01G041300 chr6B 602480118 602480947 829 False 933.000000 933 87.264000 1 829 1 chr6B.!!$F1 828
19 TraesCS4A01G041300 chr6B 534978780 534980206 1426 False 393.000000 449 89.987000 309 968 2 chr6B.!!$F3 659
20 TraesCS4A01G041300 chr3D 31750276 31750879 603 False 697.000000 697 87.624000 1 601 1 chr3D.!!$F1 600
21 TraesCS4A01G041300 chr2B 78095552 78097772 2220 True 468.500000 628 90.479500 3969 4665 2 chr2B.!!$R1 696
22 TraesCS4A01G041300 chr3A 351705934 351706800 866 True 401.333333 468 88.512667 1 968 3 chr3A.!!$R1 967
23 TraesCS4A01G041300 chr3A 700074187 700075803 1616 True 317.450000 549 93.654250 1601 2717 4 chr3A.!!$R2 1116
24 TraesCS4A01G041300 chr7D 135777781 135778505 724 True 382.500000 449 89.829500 309 975 2 chr7D.!!$R1 666
25 TraesCS4A01G041300 chr1D 3857811 3859110 1299 False 270.200000 425 89.871800 1597 2641 5 chr1D.!!$F2 1044
26 TraesCS4A01G041300 chr3B 800929884 800930980 1096 False 286.250000 412 90.817250 1803 2671 4 chr3B.!!$F2 868

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
716 881 0.044855 AGGGGGAGAAGCAGGTACAT 59.955 55.000 0.00 0.00 0.00 2.29 F
978 1143 0.252197 AAATCCCCCGATATAGGCGC 59.748 55.000 0.00 0.00 0.00 6.53 F
979 1144 0.907704 AATCCCCCGATATAGGCGCA 60.908 55.000 10.83 0.00 0.00 6.09 F
980 1145 1.614241 ATCCCCCGATATAGGCGCAC 61.614 60.000 10.83 0.00 0.00 5.34 F
982 1147 2.126071 CCCGATATAGGCGCACCG 60.126 66.667 10.83 2.45 42.76 4.94 F
2809 4112 1.456196 GGATCCATCTCGCCGACTCA 61.456 60.000 6.95 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2207 2802 0.250513 GTGCTGCTACTAACTGGCCT 59.749 55.000 3.32 0.00 0.00 5.19 R
2784 4087 1.006805 GCGAGATGGATCCAGGACG 60.007 63.158 21.33 22.69 0.00 4.79 R
2785 4088 1.369321 GGCGAGATGGATCCAGGAC 59.631 63.158 21.33 13.63 0.00 3.85 R
2809 4112 1.713078 AGGAGGATGGCAAGAAACCTT 59.287 47.619 0.00 0.00 0.00 3.50 R
2881 4308 1.806542 ACGCAAGAAGGTATGCAACAG 59.193 47.619 0.00 0.00 42.68 3.16 R
3698 5243 0.253347 AATCCCAGAAGCTCCTCCCA 60.253 55.000 0.00 0.00 0.00 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 8.969121 TGTTTTGTGCATACATATCTTCAAAG 57.031 30.769 0.00 0.00 36.53 2.77
98 102 6.916360 AAGGTGAATTAAGAGGCAAAATGA 57.084 33.333 0.00 0.00 0.00 2.57
109 113 6.117975 AGAGGCAAAATGATGTCCAAATTT 57.882 33.333 0.00 0.00 0.00 1.82
243 251 3.932545 TTTGGATCATTGGTTCAACGG 57.067 42.857 0.00 0.00 0.00 4.44
271 279 7.647907 AATGCATTTCAACTTTGAGCTTAAG 57.352 32.000 5.99 0.00 38.61 1.85
389 553 8.568676 AAATTTTCATGCAATTTGGATCATCA 57.431 26.923 12.25 0.00 33.47 3.07
428 593 7.754069 TGCATTTCAACTTTGAACTTAACTG 57.246 32.000 3.84 0.00 45.99 3.16
448 613 3.099905 TGGTTTGACCACATTTTGACCA 58.900 40.909 0.00 0.00 44.79 4.02
449 614 3.131933 TGGTTTGACCACATTTTGACCAG 59.868 43.478 0.00 0.00 44.79 4.00
495 660 9.673454 AAAATTCAAGAAACTACGGTAAATCAC 57.327 29.630 0.00 0.00 0.00 3.06
505 670 6.448006 ACTACGGTAAATCACTCATATCTGC 58.552 40.000 0.00 0.00 0.00 4.26
556 721 0.098728 GGATCATTGGTTCAACGGCG 59.901 55.000 4.80 4.80 0.00 6.46
583 748 6.330004 TGCATTTCAACTTTGAGCTTATGA 57.670 33.333 0.00 0.00 38.61 2.15
601 766 9.928618 AGCTTATGAAGATATATACTGGAGCTA 57.071 33.333 0.00 0.00 32.99 3.32
615 780 2.289444 TGGAGCTAAGGGAGTTTGAACG 60.289 50.000 0.00 0.00 0.00 3.95
616 781 2.347731 GAGCTAAGGGAGTTTGAACGG 58.652 52.381 0.00 0.00 0.00 4.44
617 782 1.003233 AGCTAAGGGAGTTTGAACGGG 59.997 52.381 0.00 0.00 0.00 5.28
618 783 1.949079 GCTAAGGGAGTTTGAACGGGG 60.949 57.143 0.00 0.00 0.00 5.73
619 784 1.626825 CTAAGGGAGTTTGAACGGGGA 59.373 52.381 0.00 0.00 0.00 4.81
620 785 0.848053 AAGGGAGTTTGAACGGGGAA 59.152 50.000 0.00 0.00 0.00 3.97
621 786 0.400594 AGGGAGTTTGAACGGGGAAG 59.599 55.000 0.00 0.00 0.00 3.46
622 787 0.608308 GGGAGTTTGAACGGGGAAGG 60.608 60.000 0.00 0.00 0.00 3.46
623 788 1.241990 GGAGTTTGAACGGGGAAGGC 61.242 60.000 0.00 0.00 0.00 4.35
624 789 1.574702 GAGTTTGAACGGGGAAGGCG 61.575 60.000 0.00 0.00 0.00 5.52
625 790 2.281900 TTTGAACGGGGAAGGCGG 60.282 61.111 0.00 0.00 0.00 6.13
626 791 3.853698 TTTGAACGGGGAAGGCGGG 62.854 63.158 0.00 0.00 0.00 6.13
648 813 4.421515 CAGGGAGCAGTGGGGCAG 62.422 72.222 0.00 0.00 35.83 4.85
651 816 4.437587 GGAGCAGTGGGGCAGCAT 62.438 66.667 0.00 0.00 35.83 3.79
652 817 2.827642 GAGCAGTGGGGCAGCATC 60.828 66.667 0.00 0.00 35.83 3.91
653 818 3.633609 GAGCAGTGGGGCAGCATCA 62.634 63.158 0.00 0.00 35.83 3.07
654 819 2.677524 GCAGTGGGGCAGCATCAA 60.678 61.111 0.00 0.00 0.00 2.57
655 820 2.707849 GCAGTGGGGCAGCATCAAG 61.708 63.158 0.00 0.00 0.00 3.02
656 821 2.362120 AGTGGGGCAGCATCAAGC 60.362 61.111 0.00 0.00 46.19 4.01
666 831 2.789842 GCATCAAGCAGCATGAGGA 58.210 52.632 16.06 0.00 44.79 3.71
667 832 0.663688 GCATCAAGCAGCATGAGGAG 59.336 55.000 16.06 5.02 44.79 3.69
668 833 0.663688 CATCAAGCAGCATGAGGAGC 59.336 55.000 6.43 0.00 39.69 4.70
669 834 0.255033 ATCAAGCAGCATGAGGAGCA 59.745 50.000 6.47 0.00 39.69 4.26
670 835 0.255033 TCAAGCAGCATGAGGAGCAT 59.745 50.000 0.00 0.00 39.69 3.79
678 843 2.144040 ATGAGGAGCATGAGAGGGC 58.856 57.895 0.00 0.00 35.42 5.19
679 844 1.756408 ATGAGGAGCATGAGAGGGCG 61.756 60.000 0.00 0.00 35.42 6.13
680 845 2.042537 AGGAGCATGAGAGGGCGA 60.043 61.111 0.00 0.00 34.54 5.54
681 846 1.680522 GAGGAGCATGAGAGGGCGAA 61.681 60.000 0.00 0.00 34.54 4.70
682 847 1.227497 GGAGCATGAGAGGGCGAAG 60.227 63.158 0.00 0.00 34.54 3.79
695 860 3.123620 CGAAGCCCACAGAGCAGC 61.124 66.667 0.00 0.00 0.00 5.25
696 861 2.033141 GAAGCCCACAGAGCAGCA 59.967 61.111 0.00 0.00 0.00 4.41
697 862 1.601759 GAAGCCCACAGAGCAGCAA 60.602 57.895 0.00 0.00 0.00 3.91
698 863 1.584380 GAAGCCCACAGAGCAGCAAG 61.584 60.000 0.00 0.00 0.00 4.01
699 864 3.060615 GCCCACAGAGCAGCAAGG 61.061 66.667 0.00 0.00 0.00 3.61
700 865 2.360852 CCCACAGAGCAGCAAGGG 60.361 66.667 0.00 0.00 0.00 3.95
701 866 2.360852 CCACAGAGCAGCAAGGGG 60.361 66.667 0.00 0.00 0.00 4.79
702 867 2.360852 CACAGAGCAGCAAGGGGG 60.361 66.667 0.00 0.00 0.00 5.40
703 868 2.530151 ACAGAGCAGCAAGGGGGA 60.530 61.111 0.00 0.00 0.00 4.81
704 869 2.271497 CAGAGCAGCAAGGGGGAG 59.729 66.667 0.00 0.00 0.00 4.30
705 870 2.123632 AGAGCAGCAAGGGGGAGA 59.876 61.111 0.00 0.00 0.00 3.71
706 871 1.539869 AGAGCAGCAAGGGGGAGAA 60.540 57.895 0.00 0.00 0.00 2.87
707 872 1.077858 GAGCAGCAAGGGGGAGAAG 60.078 63.158 0.00 0.00 0.00 2.85
708 873 2.753446 GCAGCAAGGGGGAGAAGC 60.753 66.667 0.00 0.00 0.00 3.86
709 874 2.759114 CAGCAAGGGGGAGAAGCA 59.241 61.111 0.00 0.00 0.00 3.91
710 875 1.378250 CAGCAAGGGGGAGAAGCAG 60.378 63.158 0.00 0.00 0.00 4.24
711 876 2.044551 GCAAGGGGGAGAAGCAGG 60.045 66.667 0.00 0.00 0.00 4.85
712 877 2.911926 GCAAGGGGGAGAAGCAGGT 61.912 63.158 0.00 0.00 0.00 4.00
713 878 1.562672 GCAAGGGGGAGAAGCAGGTA 61.563 60.000 0.00 0.00 0.00 3.08
714 879 0.253327 CAAGGGGGAGAAGCAGGTAC 59.747 60.000 0.00 0.00 0.00 3.34
715 880 0.178873 AAGGGGGAGAAGCAGGTACA 60.179 55.000 0.00 0.00 0.00 2.90
716 881 0.044855 AGGGGGAGAAGCAGGTACAT 59.955 55.000 0.00 0.00 0.00 2.29
717 882 0.470341 GGGGGAGAAGCAGGTACATC 59.530 60.000 0.00 0.00 0.00 3.06
718 883 1.501582 GGGGAGAAGCAGGTACATCT 58.498 55.000 0.00 0.00 0.00 2.90
719 884 1.139853 GGGGAGAAGCAGGTACATCTG 59.860 57.143 0.00 0.00 37.79 2.90
725 890 2.505982 CAGGTACATCTGCGGGGG 59.494 66.667 0.00 0.00 0.00 5.40
726 891 2.063979 CAGGTACATCTGCGGGGGA 61.064 63.158 0.00 0.00 0.00 4.81
727 892 1.762460 AGGTACATCTGCGGGGGAG 60.762 63.158 0.00 0.00 0.00 4.30
728 893 2.109181 GTACATCTGCGGGGGAGC 59.891 66.667 0.00 0.00 37.71 4.70
729 894 3.536917 TACATCTGCGGGGGAGCG 61.537 66.667 0.00 0.00 40.67 5.03
731 896 4.899239 CATCTGCGGGGGAGCGAC 62.899 72.222 0.00 0.00 40.67 5.19
745 910 3.118454 CGACGGCGGCTGTGATTT 61.118 61.111 20.97 0.00 0.00 2.17
746 911 2.677003 CGACGGCGGCTGTGATTTT 61.677 57.895 20.97 0.00 0.00 1.82
747 912 1.154225 GACGGCGGCTGTGATTTTG 60.154 57.895 20.97 0.00 0.00 2.44
748 913 2.179018 CGGCGGCTGTGATTTTGG 59.821 61.111 7.61 0.00 0.00 3.28
749 914 2.331893 CGGCGGCTGTGATTTTGGA 61.332 57.895 7.61 0.00 0.00 3.53
750 915 1.212751 GGCGGCTGTGATTTTGGAC 59.787 57.895 0.00 0.00 0.00 4.02
751 916 1.154225 GCGGCTGTGATTTTGGACG 60.154 57.895 0.00 0.00 0.00 4.79
752 917 1.501741 CGGCTGTGATTTTGGACGG 59.498 57.895 0.00 0.00 0.00 4.79
753 918 1.883021 GGCTGTGATTTTGGACGGG 59.117 57.895 0.00 0.00 0.00 5.28
754 919 0.608035 GGCTGTGATTTTGGACGGGA 60.608 55.000 0.00 0.00 0.00 5.14
755 920 1.243902 GCTGTGATTTTGGACGGGAA 58.756 50.000 0.00 0.00 0.00 3.97
756 921 1.818674 GCTGTGATTTTGGACGGGAAT 59.181 47.619 0.00 0.00 0.00 3.01
757 922 2.415893 GCTGTGATTTTGGACGGGAATG 60.416 50.000 0.00 0.00 0.00 2.67
758 923 2.164219 CTGTGATTTTGGACGGGAATGG 59.836 50.000 0.00 0.00 0.00 3.16
759 924 1.135112 GTGATTTTGGACGGGAATGGC 60.135 52.381 0.00 0.00 0.00 4.40
760 925 1.272425 TGATTTTGGACGGGAATGGCT 60.272 47.619 0.00 0.00 0.00 4.75
761 926 2.025793 TGATTTTGGACGGGAATGGCTA 60.026 45.455 0.00 0.00 0.00 3.93
762 927 2.588464 TTTTGGACGGGAATGGCTAA 57.412 45.000 0.00 0.00 0.00 3.09
763 928 2.122783 TTTGGACGGGAATGGCTAAG 57.877 50.000 0.00 0.00 0.00 2.18
764 929 0.254747 TTGGACGGGAATGGCTAAGG 59.745 55.000 0.00 0.00 0.00 2.69
765 930 0.619255 TGGACGGGAATGGCTAAGGA 60.619 55.000 0.00 0.00 0.00 3.36
766 931 0.765510 GGACGGGAATGGCTAAGGAT 59.234 55.000 0.00 0.00 0.00 3.24
767 932 1.543429 GGACGGGAATGGCTAAGGATG 60.543 57.143 0.00 0.00 0.00 3.51
768 933 1.141053 GACGGGAATGGCTAAGGATGT 59.859 52.381 0.00 0.00 0.00 3.06
769 934 1.134098 ACGGGAATGGCTAAGGATGTG 60.134 52.381 0.00 0.00 0.00 3.21
770 935 1.322442 GGGAATGGCTAAGGATGTGC 58.678 55.000 0.00 0.00 0.00 4.57
771 936 1.133668 GGGAATGGCTAAGGATGTGCT 60.134 52.381 0.00 0.00 0.00 4.40
772 937 2.659428 GGAATGGCTAAGGATGTGCTT 58.341 47.619 0.00 0.00 0.00 3.91
773 938 3.026694 GGAATGGCTAAGGATGTGCTTT 58.973 45.455 0.00 0.00 0.00 3.51
774 939 3.181483 GGAATGGCTAAGGATGTGCTTTG 60.181 47.826 0.00 0.00 0.00 2.77
775 940 2.584835 TGGCTAAGGATGTGCTTTGT 57.415 45.000 0.00 0.00 0.00 2.83
776 941 2.875296 TGGCTAAGGATGTGCTTTGTT 58.125 42.857 0.00 0.00 0.00 2.83
777 942 3.230134 TGGCTAAGGATGTGCTTTGTTT 58.770 40.909 0.00 0.00 0.00 2.83
778 943 3.005684 TGGCTAAGGATGTGCTTTGTTTG 59.994 43.478 0.00 0.00 0.00 2.93
779 944 3.578688 GCTAAGGATGTGCTTTGTTTGG 58.421 45.455 0.00 0.00 0.00 3.28
780 945 3.614870 GCTAAGGATGTGCTTTGTTTGGG 60.615 47.826 0.00 0.00 0.00 4.12
781 946 2.086610 AGGATGTGCTTTGTTTGGGT 57.913 45.000 0.00 0.00 0.00 4.51
782 947 1.963515 AGGATGTGCTTTGTTTGGGTC 59.036 47.619 0.00 0.00 0.00 4.46
783 948 1.000843 GGATGTGCTTTGTTTGGGTCC 59.999 52.381 0.00 0.00 0.00 4.46
784 949 1.686052 GATGTGCTTTGTTTGGGTCCA 59.314 47.619 0.00 0.00 0.00 4.02
785 950 1.561643 TGTGCTTTGTTTGGGTCCAA 58.438 45.000 0.00 0.00 0.00 3.53
786 951 1.480137 TGTGCTTTGTTTGGGTCCAAG 59.520 47.619 2.48 0.00 37.24 3.61
787 952 1.118838 TGCTTTGTTTGGGTCCAAGG 58.881 50.000 2.48 0.00 37.24 3.61
788 953 0.392706 GCTTTGTTTGGGTCCAAGGG 59.607 55.000 2.48 0.00 37.24 3.95
789 954 1.788229 CTTTGTTTGGGTCCAAGGGT 58.212 50.000 2.48 0.00 37.24 4.34
790 955 2.952116 CTTTGTTTGGGTCCAAGGGTA 58.048 47.619 2.48 0.00 37.24 3.69
791 956 2.368311 TTGTTTGGGTCCAAGGGTAC 57.632 50.000 2.48 0.00 37.24 3.34
792 957 1.223501 TGTTTGGGTCCAAGGGTACA 58.776 50.000 2.48 2.21 37.24 2.90
793 958 1.569548 TGTTTGGGTCCAAGGGTACAA 59.430 47.619 2.48 0.00 37.24 2.41
794 959 2.178106 TGTTTGGGTCCAAGGGTACAAT 59.822 45.455 2.48 0.00 37.24 2.71
795 960 2.560981 GTTTGGGTCCAAGGGTACAATG 59.439 50.000 2.48 0.00 37.24 2.82
796 961 0.701731 TGGGTCCAAGGGTACAATGG 59.298 55.000 0.00 0.00 35.49 3.16
797 962 0.702316 GGGTCCAAGGGTACAATGGT 59.298 55.000 9.73 0.00 35.66 3.55
798 963 1.076513 GGGTCCAAGGGTACAATGGTT 59.923 52.381 9.73 0.00 35.66 3.67
799 964 2.443416 GGTCCAAGGGTACAATGGTTC 58.557 52.381 9.73 5.84 35.66 3.62
800 965 2.041216 GGTCCAAGGGTACAATGGTTCT 59.959 50.000 9.73 0.00 35.66 3.01
801 966 3.499745 GGTCCAAGGGTACAATGGTTCTT 60.500 47.826 9.73 0.00 35.66 2.52
802 967 4.149598 GTCCAAGGGTACAATGGTTCTTT 58.850 43.478 9.73 0.00 35.66 2.52
803 968 5.318630 GTCCAAGGGTACAATGGTTCTTTA 58.681 41.667 9.73 0.00 35.66 1.85
804 969 5.949952 GTCCAAGGGTACAATGGTTCTTTAT 59.050 40.000 9.73 0.00 35.66 1.40
805 970 6.436218 GTCCAAGGGTACAATGGTTCTTTATT 59.564 38.462 9.73 0.00 35.66 1.40
806 971 7.013834 TCCAAGGGTACAATGGTTCTTTATTT 58.986 34.615 9.73 0.00 35.66 1.40
807 972 7.511028 TCCAAGGGTACAATGGTTCTTTATTTT 59.489 33.333 9.73 0.00 35.66 1.82
808 973 7.602265 CCAAGGGTACAATGGTTCTTTATTTTG 59.398 37.037 0.00 0.00 0.00 2.44
809 974 7.849322 AGGGTACAATGGTTCTTTATTTTGT 57.151 32.000 0.00 0.00 0.00 2.83
810 975 7.892609 AGGGTACAATGGTTCTTTATTTTGTC 58.107 34.615 0.00 0.00 0.00 3.18
811 976 7.728532 AGGGTACAATGGTTCTTTATTTTGTCT 59.271 33.333 0.00 0.00 0.00 3.41
812 977 9.016438 GGGTACAATGGTTCTTTATTTTGTCTA 57.984 33.333 0.00 0.00 0.00 2.59
813 978 9.836076 GGTACAATGGTTCTTTATTTTGTCTAC 57.164 33.333 0.00 0.00 0.00 2.59
838 1003 9.308000 ACTTAGTTTGTCAATTATTTCCATGGA 57.692 29.630 11.44 11.44 0.00 3.41
842 1007 8.596293 AGTTTGTCAATTATTTCCATGGATTGT 58.404 29.630 17.06 7.27 0.00 2.71
843 1008 9.218440 GTTTGTCAATTATTTCCATGGATTGTT 57.782 29.630 17.06 4.02 0.00 2.83
844 1009 9.790344 TTTGTCAATTATTTCCATGGATTGTTT 57.210 25.926 17.06 3.54 0.00 2.83
845 1010 9.790344 TTGTCAATTATTTCCATGGATTGTTTT 57.210 25.926 17.06 4.65 0.00 2.43
846 1011 9.790344 TGTCAATTATTTCCATGGATTGTTTTT 57.210 25.926 17.06 3.00 0.00 1.94
848 1013 9.790344 TCAATTATTTCCATGGATTGTTTTTGT 57.210 25.926 17.06 0.00 0.00 2.83
849 1014 9.828852 CAATTATTTCCATGGATTGTTTTTGTG 57.171 29.630 17.06 2.58 0.00 3.33
850 1015 9.571816 AATTATTTCCATGGATTGTTTTTGTGT 57.428 25.926 17.06 0.00 0.00 3.72
851 1016 8.970859 TTATTTCCATGGATTGTTTTTGTGTT 57.029 26.923 17.06 0.00 0.00 3.32
852 1017 6.674694 TTTCCATGGATTGTTTTTGTGTTG 57.325 33.333 17.06 0.00 0.00 3.33
853 1018 5.604758 TCCATGGATTGTTTTTGTGTTGA 57.395 34.783 11.44 0.00 0.00 3.18
854 1019 5.982356 TCCATGGATTGTTTTTGTGTTGAA 58.018 33.333 11.44 0.00 0.00 2.69
855 1020 6.409704 TCCATGGATTGTTTTTGTGTTGAAA 58.590 32.000 11.44 0.00 0.00 2.69
856 1021 6.538021 TCCATGGATTGTTTTTGTGTTGAAAG 59.462 34.615 11.44 0.00 0.00 2.62
857 1022 6.315891 CCATGGATTGTTTTTGTGTTGAAAGT 59.684 34.615 5.56 0.00 0.00 2.66
858 1023 6.718454 TGGATTGTTTTTGTGTTGAAAGTG 57.282 33.333 0.00 0.00 0.00 3.16
859 1024 5.641209 TGGATTGTTTTTGTGTTGAAAGTGG 59.359 36.000 0.00 0.00 0.00 4.00
860 1025 4.999751 TTGTTTTTGTGTTGAAAGTGGC 57.000 36.364 0.00 0.00 0.00 5.01
861 1026 3.995199 TGTTTTTGTGTTGAAAGTGGCA 58.005 36.364 0.00 0.00 0.00 4.92
862 1027 4.380531 TGTTTTTGTGTTGAAAGTGGCAA 58.619 34.783 0.00 0.00 0.00 4.52
863 1028 4.816385 TGTTTTTGTGTTGAAAGTGGCAAA 59.184 33.333 0.00 0.00 0.00 3.68
864 1029 5.296780 TGTTTTTGTGTTGAAAGTGGCAAAA 59.703 32.000 0.00 0.00 35.09 2.44
865 1030 5.604010 TTTTGTGTTGAAAGTGGCAAAAG 57.396 34.783 0.00 0.00 32.95 2.27
866 1031 4.527509 TTGTGTTGAAAGTGGCAAAAGA 57.472 36.364 0.00 0.00 0.00 2.52
867 1032 4.734398 TGTGTTGAAAGTGGCAAAAGAT 57.266 36.364 0.00 0.00 0.00 2.40
868 1033 4.681744 TGTGTTGAAAGTGGCAAAAGATC 58.318 39.130 0.00 0.00 0.00 2.75
869 1034 4.159321 TGTGTTGAAAGTGGCAAAAGATCA 59.841 37.500 0.00 0.00 0.00 2.92
870 1035 5.108517 GTGTTGAAAGTGGCAAAAGATCAA 58.891 37.500 0.00 0.00 0.00 2.57
871 1036 5.580297 GTGTTGAAAGTGGCAAAAGATCAAA 59.420 36.000 0.00 0.00 0.00 2.69
872 1037 5.811613 TGTTGAAAGTGGCAAAAGATCAAAG 59.188 36.000 0.00 0.00 0.00 2.77
873 1038 5.596836 TGAAAGTGGCAAAAGATCAAAGT 57.403 34.783 0.00 0.00 0.00 2.66
874 1039 6.707440 TGAAAGTGGCAAAAGATCAAAGTA 57.293 33.333 0.00 0.00 0.00 2.24
875 1040 6.503524 TGAAAGTGGCAAAAGATCAAAGTAC 58.496 36.000 0.00 0.00 0.00 2.73
876 1041 4.749245 AGTGGCAAAAGATCAAAGTACG 57.251 40.909 0.00 0.00 0.00 3.67
877 1042 3.502211 AGTGGCAAAAGATCAAAGTACGG 59.498 43.478 0.00 0.00 0.00 4.02
878 1043 3.500680 GTGGCAAAAGATCAAAGTACGGA 59.499 43.478 0.00 0.00 0.00 4.69
879 1044 3.751175 TGGCAAAAGATCAAAGTACGGAG 59.249 43.478 0.00 0.00 0.00 4.63
881 1046 4.933400 GGCAAAAGATCAAAGTACGGAGTA 59.067 41.667 0.00 0.00 45.11 2.59
895 1060 4.451629 ACGGAGTAATAAGTGTCACCTG 57.548 45.455 0.00 0.00 41.94 4.00
896 1061 4.084287 ACGGAGTAATAAGTGTCACCTGA 58.916 43.478 0.00 0.00 41.94 3.86
897 1062 4.710375 ACGGAGTAATAAGTGTCACCTGAT 59.290 41.667 0.00 0.00 41.94 2.90
898 1063 5.163540 ACGGAGTAATAAGTGTCACCTGATC 60.164 44.000 0.00 0.00 41.94 2.92
899 1064 5.163550 CGGAGTAATAAGTGTCACCTGATCA 60.164 44.000 0.00 0.00 0.00 2.92
900 1065 6.627287 CGGAGTAATAAGTGTCACCTGATCAA 60.627 42.308 0.00 0.00 0.00 2.57
901 1066 7.275920 GGAGTAATAAGTGTCACCTGATCAAT 58.724 38.462 0.00 0.00 0.00 2.57
902 1067 7.770897 GGAGTAATAAGTGTCACCTGATCAATT 59.229 37.037 0.00 0.00 0.00 2.32
903 1068 9.817809 GAGTAATAAGTGTCACCTGATCAATTA 57.182 33.333 0.00 0.00 0.00 1.40
904 1069 9.601217 AGTAATAAGTGTCACCTGATCAATTAC 57.399 33.333 0.00 4.42 0.00 1.89
905 1070 9.378551 GTAATAAGTGTCACCTGATCAATTACA 57.621 33.333 11.81 5.62 0.00 2.41
906 1071 8.862325 AATAAGTGTCACCTGATCAATTACAA 57.138 30.769 0.00 0.00 0.00 2.41
907 1072 9.466497 AATAAGTGTCACCTGATCAATTACAAT 57.534 29.630 0.00 0.00 0.00 2.71
908 1073 6.992063 AGTGTCACCTGATCAATTACAATC 57.008 37.500 0.00 0.00 0.00 2.67
909 1074 6.715280 AGTGTCACCTGATCAATTACAATCT 58.285 36.000 0.00 0.00 0.00 2.40
910 1075 7.851228 AGTGTCACCTGATCAATTACAATCTA 58.149 34.615 0.00 0.00 0.00 1.98
911 1076 8.321353 AGTGTCACCTGATCAATTACAATCTAA 58.679 33.333 0.00 0.00 0.00 2.10
912 1077 8.391106 GTGTCACCTGATCAATTACAATCTAAC 58.609 37.037 0.00 0.00 0.00 2.34
913 1078 8.321353 TGTCACCTGATCAATTACAATCTAACT 58.679 33.333 0.00 0.00 0.00 2.24
914 1079 9.817809 GTCACCTGATCAATTACAATCTAACTA 57.182 33.333 0.00 0.00 0.00 2.24
916 1081 9.823647 CACCTGATCAATTACAATCTAACTAGT 57.176 33.333 0.00 0.00 0.00 2.57
917 1082 9.823647 ACCTGATCAATTACAATCTAACTAGTG 57.176 33.333 0.00 0.00 0.00 2.74
918 1083 9.265901 CCTGATCAATTACAATCTAACTAGTGG 57.734 37.037 0.00 0.00 0.00 4.00
919 1084 8.662781 TGATCAATTACAATCTAACTAGTGGC 57.337 34.615 0.00 0.00 0.00 5.01
920 1085 8.264347 TGATCAATTACAATCTAACTAGTGGCA 58.736 33.333 0.00 0.00 0.00 4.92
921 1086 9.109393 GATCAATTACAATCTAACTAGTGGCAA 57.891 33.333 0.00 0.00 0.00 4.52
922 1087 8.856153 TCAATTACAATCTAACTAGTGGCAAA 57.144 30.769 0.00 0.00 0.00 3.68
923 1088 9.461312 TCAATTACAATCTAACTAGTGGCAAAT 57.539 29.630 0.00 0.00 0.00 2.32
926 1091 8.630054 TTACAATCTAACTAGTGGCAAATTGT 57.370 30.769 18.35 18.35 38.96 2.71
927 1092 7.145932 ACAATCTAACTAGTGGCAAATTGTC 57.854 36.000 0.00 0.00 32.28 3.18
928 1093 6.714810 ACAATCTAACTAGTGGCAAATTGTCA 59.285 34.615 0.00 0.00 32.28 3.58
929 1094 7.230510 ACAATCTAACTAGTGGCAAATTGTCAA 59.769 33.333 0.31 0.00 31.67 3.18
930 1095 7.759489 ATCTAACTAGTGGCAAATTGTCAAA 57.241 32.000 0.31 0.00 31.67 2.69
931 1096 7.202016 TCTAACTAGTGGCAAATTGTCAAAG 57.798 36.000 0.31 5.77 31.67 2.77
932 1097 5.852282 AACTAGTGGCAAATTGTCAAAGT 57.148 34.783 0.31 6.44 31.67 2.66
933 1098 5.438761 ACTAGTGGCAAATTGTCAAAGTC 57.561 39.130 0.31 0.00 31.67 3.01
934 1099 3.733443 AGTGGCAAATTGTCAAAGTCC 57.267 42.857 0.31 0.00 31.67 3.85
935 1100 3.030291 AGTGGCAAATTGTCAAAGTCCA 58.970 40.909 0.31 0.00 31.67 4.02
936 1101 3.450457 AGTGGCAAATTGTCAAAGTCCAA 59.550 39.130 0.31 0.00 31.67 3.53
937 1102 4.081198 AGTGGCAAATTGTCAAAGTCCAAA 60.081 37.500 0.31 0.00 31.67 3.28
938 1103 4.270808 GTGGCAAATTGTCAAAGTCCAAAG 59.729 41.667 0.31 0.00 31.67 2.77
939 1104 4.081198 TGGCAAATTGTCAAAGTCCAAAGT 60.081 37.500 0.00 0.00 0.00 2.66
940 1105 5.127845 TGGCAAATTGTCAAAGTCCAAAGTA 59.872 36.000 0.00 0.00 0.00 2.24
941 1106 6.045955 GGCAAATTGTCAAAGTCCAAAGTAA 58.954 36.000 0.00 0.00 0.00 2.24
942 1107 6.536941 GGCAAATTGTCAAAGTCCAAAGTAAA 59.463 34.615 0.00 0.00 0.00 2.01
943 1108 7.254421 GGCAAATTGTCAAAGTCCAAAGTAAAG 60.254 37.037 0.00 0.00 0.00 1.85
944 1109 7.254421 GCAAATTGTCAAAGTCCAAAGTAAAGG 60.254 37.037 0.00 0.00 0.00 3.11
945 1110 5.845391 TTGTCAAAGTCCAAAGTAAAGGG 57.155 39.130 0.00 0.00 0.00 3.95
946 1111 4.862371 TGTCAAAGTCCAAAGTAAAGGGT 58.138 39.130 0.00 0.00 0.00 4.34
947 1112 4.642885 TGTCAAAGTCCAAAGTAAAGGGTG 59.357 41.667 0.00 0.00 0.00 4.61
948 1113 4.037565 GTCAAAGTCCAAAGTAAAGGGTGG 59.962 45.833 0.00 0.00 0.00 4.61
949 1114 2.287977 AGTCCAAAGTAAAGGGTGGC 57.712 50.000 0.00 0.00 0.00 5.01
950 1115 1.497286 AGTCCAAAGTAAAGGGTGGCA 59.503 47.619 0.00 0.00 0.00 4.92
951 1116 2.091555 AGTCCAAAGTAAAGGGTGGCAA 60.092 45.455 0.00 0.00 0.00 4.52
952 1117 2.696187 GTCCAAAGTAAAGGGTGGCAAA 59.304 45.455 0.00 0.00 0.00 3.68
953 1118 3.133183 GTCCAAAGTAAAGGGTGGCAAAA 59.867 43.478 0.00 0.00 0.00 2.44
954 1119 3.775316 TCCAAAGTAAAGGGTGGCAAAAA 59.225 39.130 0.00 0.00 0.00 1.94
976 1141 3.933861 ATCAAATCCCCCGATATAGGC 57.066 47.619 0.00 0.00 0.00 3.93
977 1142 1.553248 TCAAATCCCCCGATATAGGCG 59.447 52.381 0.00 0.00 0.00 5.52
978 1143 0.252197 AAATCCCCCGATATAGGCGC 59.748 55.000 0.00 0.00 0.00 6.53
979 1144 0.907704 AATCCCCCGATATAGGCGCA 60.908 55.000 10.83 0.00 0.00 6.09
980 1145 1.614241 ATCCCCCGATATAGGCGCAC 61.614 60.000 10.83 0.00 0.00 5.34
981 1146 2.264794 CCCCGATATAGGCGCACC 59.735 66.667 10.83 0.00 0.00 5.01
982 1147 2.126071 CCCGATATAGGCGCACCG 60.126 66.667 10.83 2.45 42.76 4.94
1055 1222 6.152831 GGGCTCCACTTGTTCAAAATAAGTAT 59.847 38.462 2.16 0.00 40.29 2.12
1056 1223 7.338449 GGGCTCCACTTGTTCAAAATAAGTATA 59.662 37.037 2.16 0.00 40.29 1.47
1057 1224 8.398665 GGCTCCACTTGTTCAAAATAAGTATAG 58.601 37.037 2.16 4.48 40.29 1.31
1100 1267 5.750067 CCCCGAATCAATCAATCAAATCAAC 59.250 40.000 0.00 0.00 0.00 3.18
1446 1618 2.910688 CAGGCGGACTGGTATGTATT 57.089 50.000 1.89 0.00 43.70 1.89
1447 1619 3.194005 CAGGCGGACTGGTATGTATTT 57.806 47.619 1.89 0.00 43.70 1.40
1448 1620 3.541632 CAGGCGGACTGGTATGTATTTT 58.458 45.455 1.89 0.00 43.70 1.82
1449 1621 3.312421 CAGGCGGACTGGTATGTATTTTG 59.688 47.826 1.89 0.00 43.70 2.44
1450 1622 3.054655 AGGCGGACTGGTATGTATTTTGT 60.055 43.478 0.00 0.00 0.00 2.83
1550 1730 4.154347 GGCTGGACAGGGAGAGCG 62.154 72.222 1.01 0.00 31.89 5.03
1551 1731 4.154347 GCTGGACAGGGAGAGCGG 62.154 72.222 1.01 0.00 0.00 5.52
1552 1732 4.154347 CTGGACAGGGAGAGCGGC 62.154 72.222 0.00 0.00 0.00 6.53
2207 2802 4.385643 GGGACAGATTCATGGGATCAAAGA 60.386 45.833 11.07 0.00 0.00 2.52
2809 4112 1.456196 GGATCCATCTCGCCGACTCA 61.456 60.000 6.95 0.00 0.00 3.41
2881 4308 7.753132 TGTTCCAATCGTTAATTTTGATAGTGC 59.247 33.333 0.00 0.00 0.00 4.40
2882 4309 7.624360 TCCAATCGTTAATTTTGATAGTGCT 57.376 32.000 0.00 0.00 0.00 4.40
2883 4310 7.471721 TCCAATCGTTAATTTTGATAGTGCTG 58.528 34.615 0.00 0.00 0.00 4.41
2884 4311 7.120579 TCCAATCGTTAATTTTGATAGTGCTGT 59.879 33.333 0.00 0.00 0.00 4.40
2885 4312 7.754924 CCAATCGTTAATTTTGATAGTGCTGTT 59.245 33.333 0.00 0.00 0.00 3.16
2886 4313 8.577939 CAATCGTTAATTTTGATAGTGCTGTTG 58.422 33.333 0.00 0.00 0.00 3.33
2887 4314 6.083630 TCGTTAATTTTGATAGTGCTGTTGC 58.916 36.000 0.00 0.00 40.20 4.17
2899 4326 1.541147 TGCTGTTGCATACCTTCTTGC 59.459 47.619 0.00 0.00 45.31 4.01
2900 4327 1.466360 GCTGTTGCATACCTTCTTGCG 60.466 52.381 0.00 0.00 41.80 4.85
2901 4328 1.806542 CTGTTGCATACCTTCTTGCGT 59.193 47.619 0.00 0.00 41.80 5.24
2902 4329 2.226330 TGTTGCATACCTTCTTGCGTT 58.774 42.857 0.00 0.00 41.80 4.84
2903 4330 2.031245 TGTTGCATACCTTCTTGCGTTG 60.031 45.455 0.00 0.00 41.80 4.10
2904 4331 1.890876 TGCATACCTTCTTGCGTTGT 58.109 45.000 0.00 0.00 41.80 3.32
2905 4332 3.046968 TGCATACCTTCTTGCGTTGTA 57.953 42.857 0.00 0.00 41.80 2.41
2906 4333 3.000041 TGCATACCTTCTTGCGTTGTAG 59.000 45.455 0.00 0.00 41.80 2.74
2907 4334 3.000727 GCATACCTTCTTGCGTTGTAGT 58.999 45.455 0.00 0.00 0.00 2.73
3033 4524 6.705863 AAGTTTGCAATTTTAATTTGCCCA 57.294 29.167 18.01 5.98 0.00 5.36
3069 4561 9.289782 CCCTCCATTTCTAAATATAAGACCTTG 57.710 37.037 0.00 0.00 0.00 3.61
3133 4641 7.667043 AGATTTACTCATTTTGCTTCGTGTA 57.333 32.000 0.00 0.00 0.00 2.90
3241 4751 8.175069 TCTGCAAGTTATGATATTGTTTCGTTC 58.825 33.333 0.00 0.00 33.76 3.95
3267 4778 4.633126 GTCTTGGTTACGAATCTTAACCCC 59.367 45.833 21.19 7.32 45.55 4.95
3335 4850 2.485122 GTTGGAAATCCGCGGCAG 59.515 61.111 23.51 0.00 39.43 4.85
3377 4892 1.079127 GAGGCTCAGCTTACGCCAA 60.079 57.895 17.25 0.00 46.14 4.52
3516 5061 1.022735 GAAGCCATGCAGAGGATGTG 58.977 55.000 11.90 0.00 0.00 3.21
3781 5327 7.363268 GGAAACTGAGGCATCATATTTTCTTGT 60.363 37.037 20.42 4.81 34.12 3.16
3833 5379 9.699410 TGGGTTTCATTCTATTTCTATTGATGT 57.301 29.630 0.00 0.00 0.00 3.06
3842 5388 7.951591 TCTATTTCTATTGATGTGACCGATGA 58.048 34.615 0.00 0.00 0.00 2.92
3847 5393 6.762333 TCTATTGATGTGACCGATGAATCAT 58.238 36.000 0.00 0.00 0.00 2.45
3886 5432 8.909671 CATCTTAAAAGAAGAAACAGTTGATGC 58.090 33.333 0.00 0.00 38.77 3.91
3913 5459 6.987403 GAGGAATATTACCCTCTCTCTGTT 57.013 41.667 13.54 0.00 44.23 3.16
3925 5471 3.687125 TCTCTCTGTTGTACATCGACCT 58.313 45.455 0.00 0.00 0.00 3.85
4051 5600 2.896243 ATAGATCGTACGACCATCGC 57.104 50.000 22.14 6.08 45.12 4.58
4084 5633 7.792374 ACGAGCAGTTCATTGATATTTACAT 57.208 32.000 0.00 0.00 0.00 2.29
4088 5637 5.922544 GCAGTTCATTGATATTTACATGCCC 59.077 40.000 0.00 0.00 0.00 5.36
4136 5687 2.289820 TCGTTCATATCTCGTCTTCGGG 59.710 50.000 0.00 0.00 39.14 5.14
4297 7371 2.348888 CCGTGTCCTACCTCGCCTT 61.349 63.158 0.00 0.00 0.00 4.35
4298 7372 1.033746 CCGTGTCCTACCTCGCCTTA 61.034 60.000 0.00 0.00 0.00 2.69
4302 7376 1.272872 TGTCCTACCTCGCCTTAACCT 60.273 52.381 0.00 0.00 0.00 3.50
4313 7388 1.590147 CTTAACCTGGCTCGTCGGT 59.410 57.895 0.00 0.00 0.00 4.69
4362 7437 2.279517 CACCTACTCCGCATCGCC 60.280 66.667 0.00 0.00 0.00 5.54
4482 7567 3.696518 ATCCTCCCAGCCACGCCTA 62.697 63.158 0.00 0.00 0.00 3.93
4558 7644 4.937620 GCTCAATGAACAAGGTAGACATGA 59.062 41.667 0.00 0.00 0.00 3.07
4562 7648 9.987272 CTCAATGAACAAGGTAGACATGATATA 57.013 33.333 0.00 0.00 0.00 0.86
4564 7650 9.770097 CAATGAACAAGGTAGACATGATATAGT 57.230 33.333 0.00 0.00 0.00 2.12
4591 7702 3.256704 TCACCCAAACCTTCATCTACCT 58.743 45.455 0.00 0.00 0.00 3.08
4631 7742 4.457496 CGAGGGCCGACATGCTGT 62.457 66.667 0.00 0.00 41.76 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 6.633856 ACATCATTTTGCCTCTTAATTCACC 58.366 36.000 0.00 0.00 0.00 4.02
98 102 5.644636 CAGCATTTTGGCTAAATTTGGACAT 59.355 36.000 11.27 0.00 43.68 3.06
109 113 1.346062 TTTGGGCAGCATTTTGGCTA 58.654 45.000 0.00 0.00 43.68 3.93
219 227 5.468592 CGTTGAACCAATGATCCAAATTGA 58.531 37.500 5.95 0.00 37.22 2.57
243 251 4.907582 GCTCAAAGTTGAAATGCATTTTGC 59.092 37.500 24.81 16.96 39.34 3.68
297 305 9.657419 ATTTGAAACTTTTCTGACAACTTCAAT 57.343 25.926 3.48 1.45 38.02 2.57
367 531 6.703319 ACTGATGATCCAAATTGCATGAAAA 58.297 32.000 0.00 0.00 0.00 2.29
389 553 2.818130 ATGCATTTTGCCGTTGAACT 57.182 40.000 0.00 0.00 44.23 3.01
428 593 3.383185 TCTGGTCAAAATGTGGTCAAACC 59.617 43.478 0.00 0.00 39.22 3.27
478 643 8.969267 CAGATATGAGTGATTTACCGTAGTTTC 58.031 37.037 0.00 0.00 0.00 2.78
482 647 5.569441 CGCAGATATGAGTGATTTACCGTAG 59.431 44.000 0.00 0.00 0.00 3.51
486 651 5.175856 GTCACGCAGATATGAGTGATTTACC 59.824 44.000 25.96 11.90 46.77 2.85
495 660 6.006759 TCAGATTAGTCACGCAGATATGAG 57.993 41.667 0.00 0.00 0.00 2.90
505 670 7.451429 CATGAAACTTTCTCAGATTAGTCACG 58.549 38.462 3.22 0.00 0.00 4.35
556 721 8.589629 CATAAGCTCAAAGTTGAAATGCATAAC 58.410 33.333 0.00 0.44 36.64 1.89
583 748 7.714500 ACTCCCTTAGCTCCAGTATATATCTT 58.286 38.462 0.00 0.00 0.00 2.40
593 758 3.339141 GTTCAAACTCCCTTAGCTCCAG 58.661 50.000 0.00 0.00 0.00 3.86
601 766 0.848053 TTCCCCGTTCAAACTCCCTT 59.152 50.000 0.00 0.00 0.00 3.95
603 768 0.608308 CCTTCCCCGTTCAAACTCCC 60.608 60.000 0.00 0.00 0.00 4.30
631 796 4.421515 CTGCCCCACTGCTCCCTG 62.422 72.222 0.00 0.00 0.00 4.45
634 799 4.437587 ATGCTGCCCCACTGCTCC 62.438 66.667 0.00 0.00 43.25 4.70
635 800 2.827642 GATGCTGCCCCACTGCTC 60.828 66.667 0.00 0.00 43.25 4.26
636 801 3.214190 TTGATGCTGCCCCACTGCT 62.214 57.895 0.00 0.00 43.25 4.24
637 802 2.677524 TTGATGCTGCCCCACTGC 60.678 61.111 0.00 0.00 43.16 4.40
638 803 2.707849 GCTTGATGCTGCCCCACTG 61.708 63.158 0.00 0.00 38.95 3.66
639 804 2.362120 GCTTGATGCTGCCCCACT 60.362 61.111 0.00 0.00 38.95 4.00
640 805 2.677524 TGCTTGATGCTGCCCCAC 60.678 61.111 0.00 0.00 43.37 4.61
641 806 2.361992 CTGCTTGATGCTGCCCCA 60.362 61.111 0.00 0.00 43.37 4.96
646 811 0.382158 CCTCATGCTGCTTGATGCTG 59.618 55.000 17.16 7.02 43.37 4.41
647 812 0.255033 TCCTCATGCTGCTTGATGCT 59.745 50.000 17.16 0.00 43.37 3.79
648 813 0.663688 CTCCTCATGCTGCTTGATGC 59.336 55.000 17.16 0.00 43.25 3.91
649 814 0.663688 GCTCCTCATGCTGCTTGATG 59.336 55.000 17.16 14.64 0.00 3.07
650 815 0.255033 TGCTCCTCATGCTGCTTGAT 59.745 50.000 17.16 0.00 0.00 2.57
651 816 0.255033 ATGCTCCTCATGCTGCTTGA 59.745 50.000 16.14 16.14 33.26 3.02
652 817 0.382158 CATGCTCCTCATGCTGCTTG 59.618 55.000 9.07 9.07 45.20 4.01
653 818 2.795165 CATGCTCCTCATGCTGCTT 58.205 52.632 0.00 0.00 45.20 3.91
654 819 4.561452 CATGCTCCTCATGCTGCT 57.439 55.556 0.00 0.00 45.20 4.24
660 825 1.756408 CGCCCTCTCATGCTCCTCAT 61.756 60.000 0.00 0.00 35.31 2.90
661 826 2.429767 CGCCCTCTCATGCTCCTCA 61.430 63.158 0.00 0.00 0.00 3.86
662 827 1.680522 TTCGCCCTCTCATGCTCCTC 61.681 60.000 0.00 0.00 0.00 3.71
663 828 1.684386 CTTCGCCCTCTCATGCTCCT 61.684 60.000 0.00 0.00 0.00 3.69
664 829 1.227497 CTTCGCCCTCTCATGCTCC 60.227 63.158 0.00 0.00 0.00 4.70
665 830 1.886777 GCTTCGCCCTCTCATGCTC 60.887 63.158 0.00 0.00 0.00 4.26
666 831 2.188994 GCTTCGCCCTCTCATGCT 59.811 61.111 0.00 0.00 0.00 3.79
667 832 2.899339 GGCTTCGCCCTCTCATGC 60.899 66.667 0.00 0.00 44.06 4.06
677 842 3.123620 CTGCTCTGTGGGCTTCGC 61.124 66.667 0.00 0.00 0.00 4.70
678 843 3.123620 GCTGCTCTGTGGGCTTCG 61.124 66.667 0.00 0.00 0.00 3.79
679 844 1.584380 CTTGCTGCTCTGTGGGCTTC 61.584 60.000 0.00 0.00 0.00 3.86
680 845 1.602888 CTTGCTGCTCTGTGGGCTT 60.603 57.895 0.00 0.00 0.00 4.35
681 846 2.033757 CTTGCTGCTCTGTGGGCT 59.966 61.111 0.00 0.00 0.00 5.19
682 847 3.060615 CCTTGCTGCTCTGTGGGC 61.061 66.667 0.00 0.00 0.00 5.36
683 848 2.360852 CCCTTGCTGCTCTGTGGG 60.361 66.667 0.00 1.62 0.00 4.61
684 849 2.360852 CCCCTTGCTGCTCTGTGG 60.361 66.667 0.00 0.00 0.00 4.17
685 850 2.360852 CCCCCTTGCTGCTCTGTG 60.361 66.667 0.00 0.00 0.00 3.66
686 851 2.530151 TCCCCCTTGCTGCTCTGT 60.530 61.111 0.00 0.00 0.00 3.41
687 852 1.845627 TTCTCCCCCTTGCTGCTCTG 61.846 60.000 0.00 0.00 0.00 3.35
688 853 1.539869 TTCTCCCCCTTGCTGCTCT 60.540 57.895 0.00 0.00 0.00 4.09
689 854 1.077858 CTTCTCCCCCTTGCTGCTC 60.078 63.158 0.00 0.00 0.00 4.26
690 855 3.085223 CTTCTCCCCCTTGCTGCT 58.915 61.111 0.00 0.00 0.00 4.24
691 856 2.753446 GCTTCTCCCCCTTGCTGC 60.753 66.667 0.00 0.00 0.00 5.25
692 857 1.378250 CTGCTTCTCCCCCTTGCTG 60.378 63.158 0.00 0.00 0.00 4.41
693 858 2.610519 CCTGCTTCTCCCCCTTGCT 61.611 63.158 0.00 0.00 0.00 3.91
694 859 1.562672 TACCTGCTTCTCCCCCTTGC 61.563 60.000 0.00 0.00 0.00 4.01
695 860 0.253327 GTACCTGCTTCTCCCCCTTG 59.747 60.000 0.00 0.00 0.00 3.61
696 861 0.178873 TGTACCTGCTTCTCCCCCTT 60.179 55.000 0.00 0.00 0.00 3.95
697 862 0.044855 ATGTACCTGCTTCTCCCCCT 59.955 55.000 0.00 0.00 0.00 4.79
698 863 0.470341 GATGTACCTGCTTCTCCCCC 59.530 60.000 0.00 0.00 0.00 5.40
699 864 1.139853 CAGATGTACCTGCTTCTCCCC 59.860 57.143 0.00 0.00 0.00 4.81
700 865 2.611225 CAGATGTACCTGCTTCTCCC 57.389 55.000 0.00 0.00 0.00 4.30
708 873 2.032860 CTCCCCCGCAGATGTACCTG 62.033 65.000 0.00 0.00 37.23 4.00
709 874 1.762460 CTCCCCCGCAGATGTACCT 60.762 63.158 0.00 0.00 0.00 3.08
710 875 2.822399 CTCCCCCGCAGATGTACC 59.178 66.667 0.00 0.00 0.00 3.34
711 876 2.109181 GCTCCCCCGCAGATGTAC 59.891 66.667 0.00 0.00 0.00 2.90
712 877 3.536917 CGCTCCCCCGCAGATGTA 61.537 66.667 0.00 0.00 0.00 2.29
714 879 4.899239 GTCGCTCCCCCGCAGATG 62.899 72.222 0.00 0.00 0.00 2.90
728 893 2.677003 AAAATCACAGCCGCCGTCG 61.677 57.895 0.00 0.00 0.00 5.12
729 894 1.154225 CAAAATCACAGCCGCCGTC 60.154 57.895 0.00 0.00 0.00 4.79
730 895 2.625823 CCAAAATCACAGCCGCCGT 61.626 57.895 0.00 0.00 0.00 5.68
731 896 2.179018 CCAAAATCACAGCCGCCG 59.821 61.111 0.00 0.00 0.00 6.46
732 897 1.212751 GTCCAAAATCACAGCCGCC 59.787 57.895 0.00 0.00 0.00 6.13
733 898 1.154225 CGTCCAAAATCACAGCCGC 60.154 57.895 0.00 0.00 0.00 6.53
734 899 1.501741 CCGTCCAAAATCACAGCCG 59.498 57.895 0.00 0.00 0.00 5.52
735 900 0.608035 TCCCGTCCAAAATCACAGCC 60.608 55.000 0.00 0.00 0.00 4.85
736 901 1.243902 TTCCCGTCCAAAATCACAGC 58.756 50.000 0.00 0.00 0.00 4.40
737 902 2.164219 CCATTCCCGTCCAAAATCACAG 59.836 50.000 0.00 0.00 0.00 3.66
738 903 2.166829 CCATTCCCGTCCAAAATCACA 58.833 47.619 0.00 0.00 0.00 3.58
739 904 1.135112 GCCATTCCCGTCCAAAATCAC 60.135 52.381 0.00 0.00 0.00 3.06
740 905 1.181786 GCCATTCCCGTCCAAAATCA 58.818 50.000 0.00 0.00 0.00 2.57
741 906 1.474330 AGCCATTCCCGTCCAAAATC 58.526 50.000 0.00 0.00 0.00 2.17
742 907 2.818751 TAGCCATTCCCGTCCAAAAT 57.181 45.000 0.00 0.00 0.00 1.82
743 908 2.442413 CTTAGCCATTCCCGTCCAAAA 58.558 47.619 0.00 0.00 0.00 2.44
744 909 1.340600 CCTTAGCCATTCCCGTCCAAA 60.341 52.381 0.00 0.00 0.00 3.28
745 910 0.254747 CCTTAGCCATTCCCGTCCAA 59.745 55.000 0.00 0.00 0.00 3.53
746 911 0.619255 TCCTTAGCCATTCCCGTCCA 60.619 55.000 0.00 0.00 0.00 4.02
747 912 0.765510 ATCCTTAGCCATTCCCGTCC 59.234 55.000 0.00 0.00 0.00 4.79
748 913 1.141053 ACATCCTTAGCCATTCCCGTC 59.859 52.381 0.00 0.00 0.00 4.79
749 914 1.134098 CACATCCTTAGCCATTCCCGT 60.134 52.381 0.00 0.00 0.00 5.28
750 915 1.597742 CACATCCTTAGCCATTCCCG 58.402 55.000 0.00 0.00 0.00 5.14
751 916 1.133668 AGCACATCCTTAGCCATTCCC 60.134 52.381 0.00 0.00 0.00 3.97
752 917 2.355010 AGCACATCCTTAGCCATTCC 57.645 50.000 0.00 0.00 0.00 3.01
753 918 3.445096 ACAAAGCACATCCTTAGCCATTC 59.555 43.478 0.00 0.00 0.00 2.67
754 919 3.434309 ACAAAGCACATCCTTAGCCATT 58.566 40.909 0.00 0.00 0.00 3.16
755 920 3.091633 ACAAAGCACATCCTTAGCCAT 57.908 42.857 0.00 0.00 0.00 4.40
756 921 2.584835 ACAAAGCACATCCTTAGCCA 57.415 45.000 0.00 0.00 0.00 4.75
757 922 3.578688 CAAACAAAGCACATCCTTAGCC 58.421 45.455 0.00 0.00 0.00 3.93
758 923 3.578688 CCAAACAAAGCACATCCTTAGC 58.421 45.455 0.00 0.00 0.00 3.09
759 924 3.573967 ACCCAAACAAAGCACATCCTTAG 59.426 43.478 0.00 0.00 0.00 2.18
760 925 3.571590 ACCCAAACAAAGCACATCCTTA 58.428 40.909 0.00 0.00 0.00 2.69
761 926 2.365293 GACCCAAACAAAGCACATCCTT 59.635 45.455 0.00 0.00 0.00 3.36
762 927 1.963515 GACCCAAACAAAGCACATCCT 59.036 47.619 0.00 0.00 0.00 3.24
763 928 1.000843 GGACCCAAACAAAGCACATCC 59.999 52.381 0.00 0.00 0.00 3.51
764 929 1.686052 TGGACCCAAACAAAGCACATC 59.314 47.619 0.00 0.00 0.00 3.06
765 930 1.786937 TGGACCCAAACAAAGCACAT 58.213 45.000 0.00 0.00 0.00 3.21
766 931 1.480137 CTTGGACCCAAACAAAGCACA 59.520 47.619 2.84 0.00 35.33 4.57
767 932 1.202521 CCTTGGACCCAAACAAAGCAC 60.203 52.381 2.84 0.00 35.33 4.40
768 933 1.118838 CCTTGGACCCAAACAAAGCA 58.881 50.000 2.84 0.00 35.33 3.91
769 934 0.392706 CCCTTGGACCCAAACAAAGC 59.607 55.000 2.84 0.00 35.33 3.51
770 935 1.788229 ACCCTTGGACCCAAACAAAG 58.212 50.000 2.84 0.00 35.33 2.77
771 936 2.024273 TGTACCCTTGGACCCAAACAAA 60.024 45.455 2.84 0.00 35.33 2.83
772 937 1.569548 TGTACCCTTGGACCCAAACAA 59.430 47.619 2.84 0.00 35.33 2.83
773 938 1.223501 TGTACCCTTGGACCCAAACA 58.776 50.000 2.84 1.90 35.33 2.83
774 939 2.368311 TTGTACCCTTGGACCCAAAC 57.632 50.000 2.84 0.00 35.33 2.93
775 940 2.491825 CCATTGTACCCTTGGACCCAAA 60.492 50.000 2.84 0.00 35.33 3.28
776 941 1.076350 CCATTGTACCCTTGGACCCAA 59.924 52.381 1.11 1.11 31.94 4.12
777 942 0.701731 CCATTGTACCCTTGGACCCA 59.298 55.000 0.68 0.00 31.94 4.51
778 943 0.702316 ACCATTGTACCCTTGGACCC 59.298 55.000 11.54 0.00 34.52 4.46
779 944 2.041216 AGAACCATTGTACCCTTGGACC 59.959 50.000 11.54 0.00 34.52 4.46
780 945 3.434940 AGAACCATTGTACCCTTGGAC 57.565 47.619 11.54 6.36 34.52 4.02
781 946 4.463050 AAAGAACCATTGTACCCTTGGA 57.537 40.909 11.54 0.00 34.52 3.53
782 947 6.850752 AATAAAGAACCATTGTACCCTTGG 57.149 37.500 4.72 4.72 36.56 3.61
783 948 8.147704 ACAAAATAAAGAACCATTGTACCCTTG 58.852 33.333 0.00 0.00 29.89 3.61
784 949 8.257602 ACAAAATAAAGAACCATTGTACCCTT 57.742 30.769 0.00 0.00 29.89 3.95
785 950 7.728532 AGACAAAATAAAGAACCATTGTACCCT 59.271 33.333 0.00 0.00 31.68 4.34
786 951 7.892609 AGACAAAATAAAGAACCATTGTACCC 58.107 34.615 0.00 0.00 31.68 3.69
787 952 9.836076 GTAGACAAAATAAAGAACCATTGTACC 57.164 33.333 0.00 0.00 31.68 3.34
812 977 9.308000 TCCATGGAAATAATTGACAAACTAAGT 57.692 29.630 13.46 0.00 0.00 2.24
816 981 8.596293 ACAATCCATGGAAATAATTGACAAACT 58.404 29.630 25.01 5.27 32.86 2.66
817 982 8.776376 ACAATCCATGGAAATAATTGACAAAC 57.224 30.769 25.01 0.00 32.86 2.93
818 983 9.790344 AAACAATCCATGGAAATAATTGACAAA 57.210 25.926 25.01 0.00 32.86 2.83
819 984 9.790344 AAAACAATCCATGGAAATAATTGACAA 57.210 25.926 25.01 0.00 32.86 3.18
820 985 9.790344 AAAAACAATCCATGGAAATAATTGACA 57.210 25.926 25.01 0.00 32.86 3.58
822 987 9.790344 ACAAAAACAATCCATGGAAATAATTGA 57.210 25.926 25.01 0.00 32.86 2.57
823 988 9.828852 CACAAAAACAATCCATGGAAATAATTG 57.171 29.630 20.67 19.72 34.34 2.32
824 989 9.571816 ACACAAAAACAATCCATGGAAATAATT 57.428 25.926 20.67 4.95 0.00 1.40
825 990 9.571816 AACACAAAAACAATCCATGGAAATAAT 57.428 25.926 20.67 0.00 0.00 1.28
826 991 8.834465 CAACACAAAAACAATCCATGGAAATAA 58.166 29.630 20.67 0.00 0.00 1.40
827 992 8.206867 TCAACACAAAAACAATCCATGGAAATA 58.793 29.630 20.67 0.00 0.00 1.40
828 993 7.052873 TCAACACAAAAACAATCCATGGAAAT 58.947 30.769 20.67 8.17 0.00 2.17
829 994 6.409704 TCAACACAAAAACAATCCATGGAAA 58.590 32.000 20.67 0.00 0.00 3.13
830 995 5.982356 TCAACACAAAAACAATCCATGGAA 58.018 33.333 20.67 1.96 0.00 3.53
831 996 5.604758 TCAACACAAAAACAATCCATGGA 57.395 34.783 18.88 18.88 0.00 3.41
832 997 6.315891 ACTTTCAACACAAAAACAATCCATGG 59.684 34.615 4.97 4.97 0.00 3.66
833 998 7.181418 CACTTTCAACACAAAAACAATCCATG 58.819 34.615 0.00 0.00 0.00 3.66
834 999 6.315891 CCACTTTCAACACAAAAACAATCCAT 59.684 34.615 0.00 0.00 0.00 3.41
835 1000 5.641209 CCACTTTCAACACAAAAACAATCCA 59.359 36.000 0.00 0.00 0.00 3.41
836 1001 5.447144 GCCACTTTCAACACAAAAACAATCC 60.447 40.000 0.00 0.00 0.00 3.01
837 1002 5.121454 TGCCACTTTCAACACAAAAACAATC 59.879 36.000 0.00 0.00 0.00 2.67
838 1003 4.999950 TGCCACTTTCAACACAAAAACAAT 59.000 33.333 0.00 0.00 0.00 2.71
839 1004 4.380531 TGCCACTTTCAACACAAAAACAA 58.619 34.783 0.00 0.00 0.00 2.83
840 1005 3.995199 TGCCACTTTCAACACAAAAACA 58.005 36.364 0.00 0.00 0.00 2.83
841 1006 4.999751 TTGCCACTTTCAACACAAAAAC 57.000 36.364 0.00 0.00 0.00 2.43
842 1007 5.760253 TCTTTTGCCACTTTCAACACAAAAA 59.240 32.000 0.00 0.00 36.78 1.94
843 1008 5.300752 TCTTTTGCCACTTTCAACACAAAA 58.699 33.333 0.00 0.00 36.09 2.44
844 1009 4.887748 TCTTTTGCCACTTTCAACACAAA 58.112 34.783 0.00 0.00 0.00 2.83
845 1010 4.527509 TCTTTTGCCACTTTCAACACAA 57.472 36.364 0.00 0.00 0.00 3.33
846 1011 4.159321 TGATCTTTTGCCACTTTCAACACA 59.841 37.500 0.00 0.00 0.00 3.72
847 1012 4.681744 TGATCTTTTGCCACTTTCAACAC 58.318 39.130 0.00 0.00 0.00 3.32
848 1013 4.998671 TGATCTTTTGCCACTTTCAACA 57.001 36.364 0.00 0.00 0.00 3.33
849 1014 5.812127 ACTTTGATCTTTTGCCACTTTCAAC 59.188 36.000 0.00 0.00 0.00 3.18
850 1015 5.976458 ACTTTGATCTTTTGCCACTTTCAA 58.024 33.333 0.00 0.00 0.00 2.69
851 1016 5.596836 ACTTTGATCTTTTGCCACTTTCA 57.403 34.783 0.00 0.00 0.00 2.69
852 1017 5.625311 CGTACTTTGATCTTTTGCCACTTTC 59.375 40.000 0.00 0.00 0.00 2.62
853 1018 5.507315 CCGTACTTTGATCTTTTGCCACTTT 60.507 40.000 0.00 0.00 0.00 2.66
854 1019 4.023193 CCGTACTTTGATCTTTTGCCACTT 60.023 41.667 0.00 0.00 0.00 3.16
855 1020 3.502211 CCGTACTTTGATCTTTTGCCACT 59.498 43.478 0.00 0.00 0.00 4.00
856 1021 3.500680 TCCGTACTTTGATCTTTTGCCAC 59.499 43.478 0.00 0.00 0.00 5.01
857 1022 3.745799 TCCGTACTTTGATCTTTTGCCA 58.254 40.909 0.00 0.00 0.00 4.92
858 1023 3.751698 ACTCCGTACTTTGATCTTTTGCC 59.248 43.478 0.00 0.00 0.00 4.52
859 1024 6.476243 TTACTCCGTACTTTGATCTTTTGC 57.524 37.500 0.00 0.00 0.00 3.68
861 1026 9.939802 ACTTATTACTCCGTACTTTGATCTTTT 57.060 29.630 0.00 0.00 0.00 2.27
862 1027 9.367444 CACTTATTACTCCGTACTTTGATCTTT 57.633 33.333 0.00 0.00 0.00 2.52
863 1028 8.529476 ACACTTATTACTCCGTACTTTGATCTT 58.471 33.333 0.00 0.00 0.00 2.40
864 1029 8.064336 ACACTTATTACTCCGTACTTTGATCT 57.936 34.615 0.00 0.00 0.00 2.75
865 1030 7.972277 TGACACTTATTACTCCGTACTTTGATC 59.028 37.037 0.00 0.00 0.00 2.92
866 1031 7.758528 GTGACACTTATTACTCCGTACTTTGAT 59.241 37.037 0.00 0.00 0.00 2.57
867 1032 7.086376 GTGACACTTATTACTCCGTACTTTGA 58.914 38.462 0.00 0.00 0.00 2.69
868 1033 6.309737 GGTGACACTTATTACTCCGTACTTTG 59.690 42.308 5.39 0.00 0.00 2.77
869 1034 6.210185 AGGTGACACTTATTACTCCGTACTTT 59.790 38.462 5.39 0.00 0.00 2.66
870 1035 5.713861 AGGTGACACTTATTACTCCGTACTT 59.286 40.000 5.39 0.00 0.00 2.24
871 1036 5.125097 CAGGTGACACTTATTACTCCGTACT 59.875 44.000 5.39 0.00 0.00 2.73
872 1037 5.124457 TCAGGTGACACTTATTACTCCGTAC 59.876 44.000 5.39 0.00 0.00 3.67
873 1038 5.255687 TCAGGTGACACTTATTACTCCGTA 58.744 41.667 5.39 0.00 0.00 4.02
874 1039 4.084287 TCAGGTGACACTTATTACTCCGT 58.916 43.478 5.39 0.00 0.00 4.69
875 1040 4.713824 TCAGGTGACACTTATTACTCCG 57.286 45.455 5.39 0.00 0.00 4.63
876 1041 6.222038 TGATCAGGTGACACTTATTACTCC 57.778 41.667 5.39 0.00 0.00 3.85
877 1042 8.723942 AATTGATCAGGTGACACTTATTACTC 57.276 34.615 5.39 0.00 0.00 2.59
878 1043 9.601217 GTAATTGATCAGGTGACACTTATTACT 57.399 33.333 5.39 0.00 0.00 2.24
879 1044 9.378551 TGTAATTGATCAGGTGACACTTATTAC 57.621 33.333 5.39 8.93 0.00 1.89
880 1045 9.952030 TTGTAATTGATCAGGTGACACTTATTA 57.048 29.630 5.39 0.00 0.00 0.98
881 1046 8.862325 TTGTAATTGATCAGGTGACACTTATT 57.138 30.769 5.39 0.00 0.00 1.40
882 1047 9.113838 GATTGTAATTGATCAGGTGACACTTAT 57.886 33.333 5.39 0.00 0.00 1.73
883 1048 8.321353 AGATTGTAATTGATCAGGTGACACTTA 58.679 33.333 5.39 0.00 0.00 2.24
884 1049 7.170965 AGATTGTAATTGATCAGGTGACACTT 58.829 34.615 5.39 0.00 0.00 3.16
885 1050 6.715280 AGATTGTAATTGATCAGGTGACACT 58.285 36.000 5.39 0.00 0.00 3.55
886 1051 6.992063 AGATTGTAATTGATCAGGTGACAC 57.008 37.500 0.00 0.00 0.00 3.67
887 1052 8.321353 AGTTAGATTGTAATTGATCAGGTGACA 58.679 33.333 0.00 0.00 0.00 3.58
888 1053 8.723942 AGTTAGATTGTAATTGATCAGGTGAC 57.276 34.615 0.00 0.00 0.00 3.67
890 1055 9.823647 ACTAGTTAGATTGTAATTGATCAGGTG 57.176 33.333 0.00 0.00 0.00 4.00
891 1056 9.823647 CACTAGTTAGATTGTAATTGATCAGGT 57.176 33.333 0.00 0.00 0.00 4.00
892 1057 9.265901 CCACTAGTTAGATTGTAATTGATCAGG 57.734 37.037 0.00 0.00 0.00 3.86
893 1058 8.768955 GCCACTAGTTAGATTGTAATTGATCAG 58.231 37.037 0.00 0.00 0.00 2.90
894 1059 8.264347 TGCCACTAGTTAGATTGTAATTGATCA 58.736 33.333 0.00 0.00 0.00 2.92
895 1060 8.662781 TGCCACTAGTTAGATTGTAATTGATC 57.337 34.615 0.00 0.00 0.00 2.92
896 1061 9.461312 TTTGCCACTAGTTAGATTGTAATTGAT 57.539 29.630 0.00 0.00 0.00 2.57
897 1062 8.856153 TTTGCCACTAGTTAGATTGTAATTGA 57.144 30.769 0.00 0.00 0.00 2.57
900 1065 9.243105 ACAATTTGCCACTAGTTAGATTGTAAT 57.757 29.630 14.02 0.00 35.44 1.89
901 1066 8.630054 ACAATTTGCCACTAGTTAGATTGTAA 57.370 30.769 14.02 0.00 35.44 2.41
902 1067 7.880713 TGACAATTTGCCACTAGTTAGATTGTA 59.119 33.333 14.94 6.67 36.82 2.41
903 1068 6.714810 TGACAATTTGCCACTAGTTAGATTGT 59.285 34.615 14.90 14.90 38.68 2.71
904 1069 7.144722 TGACAATTTGCCACTAGTTAGATTG 57.855 36.000 0.00 3.32 0.00 2.67
905 1070 7.759489 TTGACAATTTGCCACTAGTTAGATT 57.241 32.000 0.00 0.00 0.00 2.40
906 1071 7.448469 ACTTTGACAATTTGCCACTAGTTAGAT 59.552 33.333 0.00 0.00 0.00 1.98
907 1072 6.770785 ACTTTGACAATTTGCCACTAGTTAGA 59.229 34.615 0.00 0.00 0.00 2.10
908 1073 6.970484 ACTTTGACAATTTGCCACTAGTTAG 58.030 36.000 0.00 0.00 0.00 2.34
909 1074 6.016610 GGACTTTGACAATTTGCCACTAGTTA 60.017 38.462 0.00 0.00 0.00 2.24
910 1075 5.221244 GGACTTTGACAATTTGCCACTAGTT 60.221 40.000 0.00 0.00 0.00 2.24
911 1076 4.278419 GGACTTTGACAATTTGCCACTAGT 59.722 41.667 0.00 0.00 0.00 2.57
912 1077 4.278170 TGGACTTTGACAATTTGCCACTAG 59.722 41.667 0.00 0.00 0.00 2.57
913 1078 4.211125 TGGACTTTGACAATTTGCCACTA 58.789 39.130 0.00 0.00 0.00 2.74
914 1079 3.030291 TGGACTTTGACAATTTGCCACT 58.970 40.909 0.00 0.00 0.00 4.00
915 1080 3.451141 TGGACTTTGACAATTTGCCAC 57.549 42.857 0.00 0.00 0.00 5.01
916 1081 4.081198 ACTTTGGACTTTGACAATTTGCCA 60.081 37.500 0.00 0.00 0.00 4.92
917 1082 4.441792 ACTTTGGACTTTGACAATTTGCC 58.558 39.130 0.00 0.00 0.00 4.52
918 1083 7.254421 CCTTTACTTTGGACTTTGACAATTTGC 60.254 37.037 0.00 0.00 0.00 3.68
919 1084 7.224557 CCCTTTACTTTGGACTTTGACAATTTG 59.775 37.037 0.00 0.00 0.00 2.32
920 1085 7.093068 ACCCTTTACTTTGGACTTTGACAATTT 60.093 33.333 0.00 0.00 0.00 1.82
921 1086 6.382859 ACCCTTTACTTTGGACTTTGACAATT 59.617 34.615 0.00 0.00 0.00 2.32
922 1087 5.897250 ACCCTTTACTTTGGACTTTGACAAT 59.103 36.000 0.00 0.00 0.00 2.71
923 1088 5.126384 CACCCTTTACTTTGGACTTTGACAA 59.874 40.000 0.00 0.00 0.00 3.18
924 1089 4.642885 CACCCTTTACTTTGGACTTTGACA 59.357 41.667 0.00 0.00 0.00 3.58
925 1090 4.037565 CCACCCTTTACTTTGGACTTTGAC 59.962 45.833 0.00 0.00 0.00 3.18
926 1091 4.211920 CCACCCTTTACTTTGGACTTTGA 58.788 43.478 0.00 0.00 0.00 2.69
927 1092 3.243737 GCCACCCTTTACTTTGGACTTTG 60.244 47.826 0.00 0.00 0.00 2.77
928 1093 2.963101 GCCACCCTTTACTTTGGACTTT 59.037 45.455 0.00 0.00 0.00 2.66
929 1094 2.091555 TGCCACCCTTTACTTTGGACTT 60.092 45.455 0.00 0.00 0.00 3.01
930 1095 1.497286 TGCCACCCTTTACTTTGGACT 59.503 47.619 0.00 0.00 0.00 3.85
931 1096 1.989706 TGCCACCCTTTACTTTGGAC 58.010 50.000 0.00 0.00 0.00 4.02
932 1097 2.757894 TTGCCACCCTTTACTTTGGA 57.242 45.000 0.00 0.00 0.00 3.53
933 1098 3.828875 TTTTGCCACCCTTTACTTTGG 57.171 42.857 0.00 0.00 0.00 3.28
952 1117 5.480422 GCCTATATCGGGGGATTTGATTTTT 59.520 40.000 0.00 0.00 0.00 1.94
953 1118 5.016831 GCCTATATCGGGGGATTTGATTTT 58.983 41.667 0.00 0.00 0.00 1.82
954 1119 4.600062 GCCTATATCGGGGGATTTGATTT 58.400 43.478 0.00 0.00 0.00 2.17
955 1120 3.370527 CGCCTATATCGGGGGATTTGATT 60.371 47.826 2.60 0.00 38.82 2.57
956 1121 2.170607 CGCCTATATCGGGGGATTTGAT 59.829 50.000 2.60 0.00 38.82 2.57
957 1122 1.553248 CGCCTATATCGGGGGATTTGA 59.447 52.381 2.60 0.00 38.82 2.69
958 1123 2.012051 GCGCCTATATCGGGGGATTTG 61.012 57.143 11.67 0.00 38.82 2.32
959 1124 0.252197 GCGCCTATATCGGGGGATTT 59.748 55.000 11.67 0.00 38.82 2.17
960 1125 0.907704 TGCGCCTATATCGGGGGATT 60.908 55.000 4.18 0.00 38.82 3.01
961 1126 1.305802 TGCGCCTATATCGGGGGAT 60.306 57.895 4.18 0.00 38.82 3.85
962 1127 2.118732 TGCGCCTATATCGGGGGA 59.881 61.111 4.18 6.47 38.82 4.81
963 1128 2.264794 GTGCGCCTATATCGGGGG 59.735 66.667 4.18 9.27 37.47 5.40
964 1129 2.264794 GGTGCGCCTATATCGGGG 59.735 66.667 9.68 6.01 39.79 5.73
965 1130 2.126071 CGGTGCGCCTATATCGGG 60.126 66.667 15.69 0.00 0.00 5.14
966 1131 2.126071 CCGGTGCGCCTATATCGG 60.126 66.667 15.69 3.22 0.00 4.18
967 1132 1.443872 GACCGGTGCGCCTATATCG 60.444 63.158 14.63 0.00 0.00 2.92
968 1133 0.388649 CAGACCGGTGCGCCTATATC 60.389 60.000 14.63 6.31 0.00 1.63
969 1134 1.666011 CAGACCGGTGCGCCTATAT 59.334 57.895 14.63 0.00 0.00 0.86
970 1135 3.125607 CAGACCGGTGCGCCTATA 58.874 61.111 14.63 0.00 0.00 1.31
971 1136 4.530857 GCAGACCGGTGCGCCTAT 62.531 66.667 14.63 1.09 32.74 2.57
977 1142 3.127533 GTGGATGCAGACCGGTGC 61.128 66.667 14.63 11.81 44.27 5.01
978 1143 2.815211 CGTGGATGCAGACCGGTG 60.815 66.667 14.63 0.00 0.00 4.94
979 1144 3.311110 ACGTGGATGCAGACCGGT 61.311 61.111 6.92 6.92 0.00 5.28
980 1145 2.815211 CACGTGGATGCAGACCGG 60.815 66.667 7.95 0.00 0.00 5.28
981 1146 2.048222 ACACGTGGATGCAGACCG 60.048 61.111 21.57 0.00 0.00 4.79
982 1147 0.391661 ATCACACGTGGATGCAGACC 60.392 55.000 21.57 5.86 0.00 3.85
1100 1267 3.123674 CGAAACACTCGGGAGGAAG 57.876 57.895 0.00 0.00 44.20 3.46
1121 1288 0.179100 CTGGCTGTGTTCGATCCGAT 60.179 55.000 0.00 0.00 35.23 4.18
1122 1289 1.215382 CTGGCTGTGTTCGATCCGA 59.785 57.895 0.00 0.00 0.00 4.55
1124 1291 2.109126 GCCTGGCTGTGTTCGATCC 61.109 63.158 12.43 0.00 0.00 3.36
1388 1559 3.378399 GAGAGGCGGAGGAACAGGC 62.378 68.421 0.00 0.00 39.26 4.85
1448 1620 6.126997 CCAGGGGTTAGTTGTATGTGTATACA 60.127 42.308 0.08 0.08 45.54 2.29
1449 1621 6.098695 TCCAGGGGTTAGTTGTATGTGTATAC 59.901 42.308 0.00 0.00 39.69 1.47
1450 1622 6.203813 TCCAGGGGTTAGTTGTATGTGTATA 58.796 40.000 0.00 0.00 0.00 1.47
1552 1732 4.473520 ATCCGTCCCTGCTTGGCG 62.474 66.667 0.00 0.00 0.00 5.69
1553 1733 2.825836 CATCCGTCCCTGCTTGGC 60.826 66.667 0.00 0.00 0.00 4.52
1554 1734 2.825836 GCATCCGTCCCTGCTTGG 60.826 66.667 0.00 0.00 35.49 3.61
2207 2802 0.250513 GTGCTGCTACTAACTGGCCT 59.749 55.000 3.32 0.00 0.00 5.19
2783 4086 1.739338 GCGAGATGGATCCAGGACGT 61.739 60.000 26.13 10.88 0.00 4.34
2784 4087 1.006805 GCGAGATGGATCCAGGACG 60.007 63.158 21.33 22.69 0.00 4.79
2785 4088 1.369321 GGCGAGATGGATCCAGGAC 59.631 63.158 21.33 13.63 0.00 3.85
2809 4112 1.713078 AGGAGGATGGCAAGAAACCTT 59.287 47.619 0.00 0.00 0.00 3.50
2881 4308 1.806542 ACGCAAGAAGGTATGCAACAG 59.193 47.619 0.00 0.00 42.68 3.16
2882 4309 1.890876 ACGCAAGAAGGTATGCAACA 58.109 45.000 0.00 0.00 42.68 3.33
2883 4310 2.031157 ACAACGCAAGAAGGTATGCAAC 60.031 45.455 0.00 0.00 42.68 4.17
2884 4311 2.226330 ACAACGCAAGAAGGTATGCAA 58.774 42.857 0.00 0.00 42.68 4.08
2885 4312 1.890876 ACAACGCAAGAAGGTATGCA 58.109 45.000 0.00 0.00 42.68 3.96
2886 4313 3.000727 ACTACAACGCAAGAAGGTATGC 58.999 45.455 0.00 0.00 43.62 3.14
2887 4314 4.495422 AGACTACAACGCAAGAAGGTATG 58.505 43.478 0.00 0.00 43.62 2.39
2888 4315 4.803098 AGACTACAACGCAAGAAGGTAT 57.197 40.909 0.00 0.00 43.62 2.73
2889 4316 4.595762 AAGACTACAACGCAAGAAGGTA 57.404 40.909 0.00 0.00 43.62 3.08
2890 4317 3.470645 AAGACTACAACGCAAGAAGGT 57.529 42.857 0.00 0.00 43.62 3.50
2891 4318 7.772332 ATTATAAGACTACAACGCAAGAAGG 57.228 36.000 0.00 0.00 43.62 3.46
2892 4319 7.636359 GCAATTATAAGACTACAACGCAAGAAG 59.364 37.037 0.00 0.00 43.62 2.85
2893 4320 7.118535 TGCAATTATAAGACTACAACGCAAGAA 59.881 33.333 0.00 0.00 43.62 2.52
2894 4321 6.592220 TGCAATTATAAGACTACAACGCAAGA 59.408 34.615 0.00 0.00 43.62 3.02
2895 4322 7.426456 CTTGCAATTATAAGACTACAACGCAAG 59.574 37.037 0.00 0.00 43.52 4.01
2896 4323 6.729391 TGCAATTATAAGACTACAACGCAA 57.271 33.333 0.00 0.00 0.00 4.85
2897 4324 6.370442 ACTTGCAATTATAAGACTACAACGCA 59.630 34.615 0.00 0.00 0.00 5.24
2898 4325 6.682863 CACTTGCAATTATAAGACTACAACGC 59.317 38.462 0.00 0.00 0.00 4.84
2899 4326 7.064134 TCCACTTGCAATTATAAGACTACAACG 59.936 37.037 0.00 0.00 0.00 4.10
2900 4327 8.263940 TCCACTTGCAATTATAAGACTACAAC 57.736 34.615 0.00 0.00 0.00 3.32
2901 4328 8.856153 TTCCACTTGCAATTATAAGACTACAA 57.144 30.769 0.00 0.00 0.00 2.41
2902 4329 8.100791 ACTTCCACTTGCAATTATAAGACTACA 58.899 33.333 0.00 0.00 0.00 2.74
2903 4330 8.391106 CACTTCCACTTGCAATTATAAGACTAC 58.609 37.037 0.00 0.00 0.00 2.73
2904 4331 7.065803 GCACTTCCACTTGCAATTATAAGACTA 59.934 37.037 0.00 0.00 38.68 2.59
2905 4332 6.127897 GCACTTCCACTTGCAATTATAAGACT 60.128 38.462 0.00 0.00 38.68 3.24
2906 4333 6.030228 GCACTTCCACTTGCAATTATAAGAC 58.970 40.000 0.00 0.00 38.68 3.01
2907 4334 5.945784 AGCACTTCCACTTGCAATTATAAGA 59.054 36.000 0.00 0.00 41.48 2.10
3023 4514 3.562609 GGGGTACTCAACTGGGCAAATTA 60.563 47.826 0.00 0.00 0.00 1.40
3114 4622 8.440059 CAAACTATACACGAAGCAAAATGAGTA 58.560 33.333 0.00 0.00 0.00 2.59
3159 4667 6.566480 TCCCTCCATTCCTAAATATAAGCCTT 59.434 38.462 0.00 0.00 0.00 4.35
3160 4668 6.098446 TCCCTCCATTCCTAAATATAAGCCT 58.902 40.000 0.00 0.00 0.00 4.58
3161 4669 6.012421 ACTCCCTCCATTCCTAAATATAAGCC 60.012 42.308 0.00 0.00 0.00 4.35
3162 4670 7.021998 ACTCCCTCCATTCCTAAATATAAGC 57.978 40.000 0.00 0.00 0.00 3.09
3177 4686 2.432444 CGTTGCAAAATACTCCCTCCA 58.568 47.619 0.00 0.00 0.00 3.86
3222 4732 8.116624 AGACGAGAACGAAACAATATCATAAC 57.883 34.615 0.00 0.00 42.66 1.89
3237 4747 2.320805 TCGTAACCAAGACGAGAACG 57.679 50.000 0.00 0.00 43.99 3.95
3267 4778 1.566018 GGAACCTGGAGTCAAACGCG 61.566 60.000 3.53 3.53 0.00 6.01
3377 4892 4.693566 CGTCCAACTTGTACACCATGTAAT 59.306 41.667 0.00 0.00 34.21 1.89
3516 5061 1.376037 CCTTTCACGAGGGAGCACC 60.376 63.158 0.00 0.00 40.67 5.01
3636 5181 1.442526 GCATGATGAGACCGCCCTTG 61.443 60.000 0.00 0.00 0.00 3.61
3686 5231 2.633481 GCTCCTCCCATAATTAGTCCGT 59.367 50.000 0.00 0.00 0.00 4.69
3698 5243 0.253347 AATCCCAGAAGCTCCTCCCA 60.253 55.000 0.00 0.00 0.00 4.37
3781 5327 7.767261 AGACAGCAGTTTAAAAACACACATTA 58.233 30.769 8.21 0.00 41.30 1.90
3833 5379 5.162794 CAAGCAAAAATGATTCATCGGTCA 58.837 37.500 0.00 0.00 0.00 4.02
3873 5419 3.668447 TCCTCTCTGCATCAACTGTTTC 58.332 45.455 0.00 0.00 0.00 2.78
3907 5453 3.692101 AGAGAGGTCGATGTACAACAGAG 59.308 47.826 0.00 0.00 0.00 3.35
3909 5455 4.082733 TCAAGAGAGGTCGATGTACAACAG 60.083 45.833 0.00 0.00 0.00 3.16
3912 5458 4.703645 CTCAAGAGAGGTCGATGTACAA 57.296 45.455 0.00 0.00 38.26 2.41
3966 5512 4.097892 ACCGGCAGGAATTTAGCTTTATTG 59.902 41.667 10.86 0.00 41.02 1.90
3967 5513 4.278310 ACCGGCAGGAATTTAGCTTTATT 58.722 39.130 10.86 0.00 41.02 1.40
3979 5525 2.047213 AAAACTCCGACCGGCAGGAA 62.047 55.000 17.78 4.40 41.02 3.36
4029 5576 4.493708 CGCGATGGTCGTACGATCTATAAT 60.494 45.833 27.43 13.79 42.81 1.28
4071 5620 4.281688 GTGGCAGGGCATGTAAATATCAAT 59.718 41.667 0.00 0.00 0.00 2.57
4072 5621 3.636300 GTGGCAGGGCATGTAAATATCAA 59.364 43.478 0.00 0.00 0.00 2.57
4088 5637 0.605319 TTTTCACTAGGCGGTGGCAG 60.605 55.000 12.21 0.00 42.47 4.85
4119 5670 2.228059 GGACCCGAAGACGAGATATGA 58.772 52.381 0.00 0.00 42.66 2.15
4180 5731 4.435436 CTAGCCAGTGCGCCGACA 62.435 66.667 4.18 0.00 44.33 4.35
4282 7356 1.188863 GGTTAAGGCGAGGTAGGACA 58.811 55.000 0.00 0.00 0.00 4.02
4297 7371 1.592400 CTCACCGACGAGCCAGGTTA 61.592 60.000 0.00 0.00 35.85 2.85
4298 7372 2.915659 TCACCGACGAGCCAGGTT 60.916 61.111 0.00 0.00 35.85 3.50
4313 7388 1.676635 GCCATGGCTTCTGTGCTCA 60.677 57.895 29.98 0.00 38.26 4.26
4482 7567 0.749454 GCTGGGAAATGAGGATGCGT 60.749 55.000 0.00 0.00 0.00 5.24
4558 7644 5.281314 AGGTTTGGGTGAGACTGACTATAT 58.719 41.667 0.00 0.00 0.00 0.86
4562 7648 1.807814 AGGTTTGGGTGAGACTGACT 58.192 50.000 0.00 0.00 0.00 3.41
4564 7650 2.123589 TGAAGGTTTGGGTGAGACTGA 58.876 47.619 0.00 0.00 0.00 3.41
4591 7702 6.059484 CGTCAAGCCCCCTCTATTATTTTTA 58.941 40.000 0.00 0.00 0.00 1.52
4631 7742 3.058570 CCACGATTTGATTTGACCAACGA 60.059 43.478 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.