Multiple sequence alignment - TraesCS4A01G037000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G037000 chr4A 100.000 3325 0 0 1 3325 29294842 29298166 0.000000e+00 6141.0
1 TraesCS4A01G037000 chr4A 89.790 715 43 8 893 1595 140718517 140717821 0.000000e+00 889.0
2 TraesCS4A01G037000 chr4A 84.261 521 61 12 1789 2309 29303762 29304261 3.860000e-134 488.0
3 TraesCS4A01G037000 chr4A 85.867 375 48 4 1304 1677 29303360 29303730 8.650000e-106 394.0
4 TraesCS4A01G037000 chr4A 93.578 218 10 3 3096 3311 573658511 573658296 4.140000e-84 322.0
5 TraesCS4A01G037000 chr4A 80.916 393 59 7 1297 1675 26633148 26632758 2.510000e-76 296.0
6 TraesCS4A01G037000 chr4A 80.916 393 59 7 1297 1675 26635890 26635500 2.510000e-76 296.0
7 TraesCS4A01G037000 chr4A 80.916 393 59 7 1297 1675 26648447 26648057 2.510000e-76 296.0
8 TraesCS4A01G037000 chr4A 84.698 281 35 6 1791 2068 29380532 29380807 1.180000e-69 274.0
9 TraesCS4A01G037000 chr4A 92.913 127 5 3 2442 2566 521304697 521304573 7.330000e-42 182.0
10 TraesCS4A01G037000 chr4A 86.747 83 6 4 454 532 665144961 665145042 1.640000e-13 87.9
11 TraesCS4A01G037000 chr4B 91.684 1936 91 30 449 2357 545148279 545150171 0.000000e+00 2619.0
12 TraesCS4A01G037000 chr4B 81.062 697 97 26 1013 1682 545179175 545179863 1.060000e-144 523.0
13 TraesCS4A01G037000 chr4B 84.536 291 40 3 1791 2080 546024375 546024661 1.950000e-72 283.0
14 TraesCS4A01G037000 chr4B 82.099 324 40 9 1956 2279 545180027 545180332 9.150000e-66 261.0
15 TraesCS4A01G037000 chr4B 82.734 278 43 5 1802 2078 546674241 546674514 3.310000e-60 243.0
16 TraesCS4A01G037000 chr4B 80.064 311 50 12 1802 2105 546580302 546580607 1.550000e-53 220.0
17 TraesCS4A01G037000 chr4B 80.064 311 50 12 1802 2105 546602543 546602848 1.550000e-53 220.0
18 TraesCS4A01G037000 chr4B 77.950 322 57 10 1789 2105 546820428 546820740 4.380000e-44 189.0
19 TraesCS4A01G037000 chr4B 86.335 161 18 4 1 159 356964662 356964504 4.410000e-39 172.0
20 TraesCS4A01G037000 chr4B 83.099 142 14 7 454 586 296156409 296156269 1.620000e-23 121.0
21 TraesCS4A01G037000 chr4D 95.189 1351 52 5 981 2331 440038152 440039489 0.000000e+00 2122.0
22 TraesCS4A01G037000 chr4D 92.661 218 12 3 3096 3311 40799164 40798949 8.960000e-81 311.0
23 TraesCS4A01G037000 chr4D 92.661 218 12 3 3096 3311 73990478 73990693 8.960000e-81 311.0
24 TraesCS4A01G037000 chr4D 85.324 293 34 6 1791 2080 440283432 440283718 9.020000e-76 294.0
25 TraesCS4A01G037000 chr4D 83.456 272 40 3 1802 2072 441058695 441058962 7.120000e-62 248.0
26 TraesCS4A01G037000 chr4D 89.726 146 11 3 591 736 440037750 440037891 2.040000e-42 183.0
27 TraesCS4A01G037000 chr4D 100.000 30 0 0 454 483 498881772 498881801 4.630000e-04 56.5
28 TraesCS4A01G037000 chr3A 90.922 705 46 6 893 1592 736941024 736940333 0.000000e+00 931.0
29 TraesCS4A01G037000 chr3A 89.787 705 43 11 893 1592 539848048 539848728 0.000000e+00 876.0
30 TraesCS4A01G037000 chr3A 92.168 549 33 7 2569 3108 308773639 308773092 0.000000e+00 767.0
31 TraesCS4A01G037000 chr3A 88.608 158 17 1 1 158 697555762 697555918 1.220000e-44 191.0
32 TraesCS4A01G037000 chr3A 97.368 38 1 0 2410 2447 742274972 742275009 7.700000e-07 65.8
33 TraesCS4A01G037000 chr5A 90.638 705 48 7 893 1592 396387525 396388216 0.000000e+00 920.0
34 TraesCS4A01G037000 chr5A 89.963 269 27 0 187 455 591986722 591986454 6.830000e-92 348.0
35 TraesCS4A01G037000 chr5A 94.167 120 4 2 2448 2566 670269883 670269766 2.640000e-41 180.0
36 TraesCS4A01G037000 chr5A 81.579 152 15 8 445 585 616353293 616353442 2.710000e-21 113.0
37 TraesCS4A01G037000 chr1A 90.295 711 52 7 893 1592 384105842 384106546 0.000000e+00 915.0
38 TraesCS4A01G037000 chr1A 89.607 712 44 8 893 1592 102378938 102378245 0.000000e+00 878.0
39 TraesCS4A01G037000 chr1A 89.963 269 27 0 187 455 583180593 583180325 6.830000e-92 348.0
40 TraesCS4A01G037000 chr2D 89.912 684 35 14 2452 3108 36545694 36546370 0.000000e+00 850.0
41 TraesCS4A01G037000 chr2D 89.219 269 27 2 185 452 630465778 630465511 5.320000e-88 335.0
42 TraesCS4A01G037000 chr2D 91.703 229 15 3 3095 3321 10221493 10221719 6.920000e-82 315.0
43 TraesCS4A01G037000 chr2D 91.538 130 7 3 2438 2566 594477362 594477488 3.410000e-40 176.0
44 TraesCS4A01G037000 chr7D 92.727 550 28 7 2569 3108 184645966 184645419 0.000000e+00 784.0
45 TraesCS4A01G037000 chr7D 92.210 552 33 5 2566 3108 56285597 56286147 0.000000e+00 773.0
46 TraesCS4A01G037000 chr7D 92.043 553 33 7 2566 3108 568365162 568365713 0.000000e+00 767.0
47 TraesCS4A01G037000 chr7D 92.920 226 12 3 3096 3319 568365779 568366002 3.200000e-85 326.0
48 TraesCS4A01G037000 chr7D 91.538 130 7 4 2439 2566 600614129 600614256 3.410000e-40 176.0
49 TraesCS4A01G037000 chr7D 84.663 163 20 3 1 159 603434486 603434647 1.230000e-34 158.0
50 TraesCS4A01G037000 chr7D 80.282 142 16 9 454 585 616253500 616253361 2.730000e-16 97.1
51 TraesCS4A01G037000 chr7D 93.548 62 3 1 454 514 498265530 498265591 1.270000e-14 91.6
52 TraesCS4A01G037000 chr7D 94.828 58 2 1 454 510 272295367 272295310 4.570000e-14 89.8
53 TraesCS4A01G037000 chr7D 80.000 135 16 7 450 574 422617146 422617013 4.570000e-14 89.8
54 TraesCS4A01G037000 chr7D 94.828 58 2 1 454 510 611009239 611009182 4.570000e-14 89.8
55 TraesCS4A01G037000 chr1D 92.586 553 30 6 2566 3108 458720112 458720663 0.000000e+00 784.0
56 TraesCS4A01G037000 chr1D 89.753 283 28 1 173 455 464590361 464590080 8.770000e-96 361.0
57 TraesCS4A01G037000 chr1D 92.661 218 11 4 3096 3311 424931748 424931962 3.220000e-80 309.0
58 TraesCS4A01G037000 chr1D 81.955 133 11 6 454 573 79938516 79938384 2.110000e-17 100.0
59 TraesCS4A01G037000 chr1D 85.366 82 9 3 448 527 204886814 204886894 7.650000e-12 82.4
60 TraesCS4A01G037000 chr1D 89.062 64 6 1 448 510 460919371 460919434 9.890000e-11 78.7
61 TraesCS4A01G037000 chr1D 88.710 62 6 1 450 510 460152290 460152351 1.280000e-09 75.0
62 TraesCS4A01G037000 chr1D 84.416 77 9 3 454 528 18757293 18757218 4.600000e-09 73.1
63 TraesCS4A01G037000 chr1D 77.536 138 19 7 448 574 53937119 53936983 4.600000e-09 73.1
64 TraesCS4A01G037000 chr5D 92.224 553 32 6 2566 3108 483580935 483581486 0.000000e+00 773.0
65 TraesCS4A01G037000 chr5D 88.199 161 14 2 1 158 505632763 505632605 1.570000e-43 187.0
66 TraesCS4A01G037000 chr5D 92.913 127 5 3 2441 2566 254593511 254593634 7.330000e-42 182.0
67 TraesCS4A01G037000 chr5D 87.421 159 16 4 1 158 349291367 349291522 2.640000e-41 180.0
68 TraesCS4A01G037000 chr5D 85.535 159 14 7 1 159 439502183 439502034 1.230000e-34 158.0
69 TraesCS4A01G037000 chr5D 83.221 149 11 9 448 585 493250935 493251080 1.250000e-24 124.0
70 TraesCS4A01G037000 chr3D 92.058 554 34 5 2569 3113 434909397 434908845 0.000000e+00 771.0
71 TraesCS4A01G037000 chr3D 89.630 270 26 1 186 455 338286998 338286731 3.180000e-90 342.0
72 TraesCS4A01G037000 chr3D 93.458 214 9 3 3096 3306 612019854 612020065 2.490000e-81 313.0
73 TraesCS4A01G037000 chr3D 89.333 150 9 6 2416 2564 327721898 327722041 7.330000e-42 182.0
74 TraesCS4A01G037000 chr3D 86.709 158 19 2 1 158 344022343 344022498 1.230000e-39 174.0
75 TraesCS4A01G037000 chr3D 85.714 126 15 3 461 584 574785375 574785251 2.690000e-26 130.0
76 TraesCS4A01G037000 chr2A 92.196 551 30 6 2569 3108 136643164 136642616 0.000000e+00 767.0
77 TraesCS4A01G037000 chr2A 93.023 215 12 2 3098 3311 136642549 136642337 8.960000e-81 311.0
78 TraesCS4A01G037000 chr2A 92.857 126 5 3 2442 2566 769259433 769259311 2.640000e-41 180.0
79 TraesCS4A01G037000 chr7A 88.254 613 37 11 994 1592 33752554 33751963 0.000000e+00 701.0
80 TraesCS4A01G037000 chr7A 89.784 509 33 6 893 1397 33753069 33752576 4.680000e-178 634.0
81 TraesCS4A01G037000 chr7A 86.957 161 18 3 1 159 602093126 602093285 9.480000e-41 178.0
82 TraesCS4A01G037000 chrUn 90.000 460 25 7 893 1352 114827326 114827764 2.880000e-160 575.0
83 TraesCS4A01G037000 chrUn 94.118 204 11 1 1390 1592 114827759 114827962 3.220000e-80 309.0
84 TraesCS4A01G037000 chrUn 80.986 142 17 6 454 586 309799444 309799584 1.630000e-18 104.0
85 TraesCS4A01G037000 chrUn 80.986 142 17 6 454 586 315208191 315208331 1.630000e-18 104.0
86 TraesCS4A01G037000 chrUn 91.228 57 5 0 454 510 29514075 29514131 9.890000e-11 78.7
87 TraesCS4A01G037000 chrUn 83.951 81 9 2 450 530 272114471 272114395 1.280000e-09 75.0
88 TraesCS4A01G037000 chr6D 89.565 460 26 11 893 1352 291620142 291620579 6.230000e-157 564.0
89 TraesCS4A01G037000 chr6D 93.458 214 9 3 3096 3306 49185464 49185675 2.490000e-81 313.0
90 TraesCS4A01G037000 chr6D 94.444 198 10 1 1396 1592 291620574 291620771 1.500000e-78 303.0
91 TraesCS4A01G037000 chr6D 90.625 64 5 1 448 510 62891203 62891140 2.130000e-12 84.2
92 TraesCS4A01G037000 chr6D 78.417 139 18 8 448 574 123124597 123124735 2.750000e-11 80.5
93 TraesCS4A01G037000 chr6D 77.622 143 25 6 454 591 140157120 140157260 2.750000e-11 80.5
94 TraesCS4A01G037000 chr6D 85.526 76 9 2 454 527 63133868 63133943 9.890000e-11 78.7
95 TraesCS4A01G037000 chr7B 90.406 271 25 1 186 455 477816933 477817203 4.080000e-94 355.0
96 TraesCS4A01G037000 chr7B 81.308 107 13 6 454 554 202349835 202349940 2.750000e-11 80.5
97 TraesCS4A01G037000 chr2B 90.706 269 22 2 187 455 359484140 359484405 4.080000e-94 355.0
98 TraesCS4A01G037000 chr3B 90.000 270 26 1 186 455 740344399 740344667 6.830000e-92 348.0
99 TraesCS4A01G037000 chr3B 88.514 148 9 5 2420 2564 100829767 100829909 4.410000e-39 172.0
100 TraesCS4A01G037000 chr3B 88.028 142 12 5 21 161 406564199 406564062 2.650000e-36 163.0
101 TraesCS4A01G037000 chr6B 88.612 281 29 3 175 455 642993451 642993728 4.110000e-89 339.0
102 TraesCS4A01G037000 chr5B 91.538 130 5 5 2438 2566 677671742 677671618 1.230000e-39 174.0
103 TraesCS4A01G037000 chr5B 78.912 147 22 7 454 591 593555147 593555001 1.270000e-14 91.6
104 TraesCS4A01G037000 chr6A 81.208 149 18 8 454 592 58013735 58013587 9.750000e-21 111.0
105 TraesCS4A01G037000 chr1B 88.312 77 7 2 454 528 443004332 443004256 1.270000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G037000 chr4A 29294842 29298166 3324 False 6141.0 6141 100.0000 1 3325 1 chr4A.!!$F1 3324
1 TraesCS4A01G037000 chr4A 140717821 140718517 696 True 889.0 889 89.7900 893 1595 1 chr4A.!!$R2 702
2 TraesCS4A01G037000 chr4A 29303360 29304261 901 False 441.0 488 85.0640 1304 2309 2 chr4A.!!$F4 1005
3 TraesCS4A01G037000 chr4A 26632758 26635890 3132 True 296.0 296 80.9160 1297 1675 2 chr4A.!!$R5 378
4 TraesCS4A01G037000 chr4B 545148279 545150171 1892 False 2619.0 2619 91.6840 449 2357 1 chr4B.!!$F1 1908
5 TraesCS4A01G037000 chr4B 545179175 545180332 1157 False 392.0 523 81.5805 1013 2279 2 chr4B.!!$F7 1266
6 TraesCS4A01G037000 chr4D 440037750 440039489 1739 False 1152.5 2122 92.4575 591 2331 2 chr4D.!!$F5 1740
7 TraesCS4A01G037000 chr3A 736940333 736941024 691 True 931.0 931 90.9220 893 1592 1 chr3A.!!$R2 699
8 TraesCS4A01G037000 chr3A 539848048 539848728 680 False 876.0 876 89.7870 893 1592 1 chr3A.!!$F1 699
9 TraesCS4A01G037000 chr3A 308773092 308773639 547 True 767.0 767 92.1680 2569 3108 1 chr3A.!!$R1 539
10 TraesCS4A01G037000 chr5A 396387525 396388216 691 False 920.0 920 90.6380 893 1592 1 chr5A.!!$F1 699
11 TraesCS4A01G037000 chr1A 384105842 384106546 704 False 915.0 915 90.2950 893 1592 1 chr1A.!!$F1 699
12 TraesCS4A01G037000 chr1A 102378245 102378938 693 True 878.0 878 89.6070 893 1592 1 chr1A.!!$R1 699
13 TraesCS4A01G037000 chr2D 36545694 36546370 676 False 850.0 850 89.9120 2452 3108 1 chr2D.!!$F2 656
14 TraesCS4A01G037000 chr7D 184645419 184645966 547 True 784.0 784 92.7270 2569 3108 1 chr7D.!!$R1 539
15 TraesCS4A01G037000 chr7D 56285597 56286147 550 False 773.0 773 92.2100 2566 3108 1 chr7D.!!$F1 542
16 TraesCS4A01G037000 chr7D 568365162 568366002 840 False 546.5 767 92.4815 2566 3319 2 chr7D.!!$F5 753
17 TraesCS4A01G037000 chr1D 458720112 458720663 551 False 784.0 784 92.5860 2566 3108 1 chr1D.!!$F3 542
18 TraesCS4A01G037000 chr5D 483580935 483581486 551 False 773.0 773 92.2240 2566 3108 1 chr5D.!!$F3 542
19 TraesCS4A01G037000 chr3D 434908845 434909397 552 True 771.0 771 92.0580 2569 3113 1 chr3D.!!$R2 544
20 TraesCS4A01G037000 chr2A 136642337 136643164 827 True 539.0 767 92.6095 2569 3311 2 chr2A.!!$R2 742
21 TraesCS4A01G037000 chr7A 33751963 33753069 1106 True 667.5 701 89.0190 893 1592 2 chr7A.!!$R1 699
22 TraesCS4A01G037000 chrUn 114827326 114827962 636 False 442.0 575 92.0590 893 1592 2 chrUn.!!$F4 699
23 TraesCS4A01G037000 chr6D 291620142 291620771 629 False 433.5 564 92.0045 893 1592 2 chr6D.!!$F5 699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
39 40 0.177141 TACTAATGGCGCACTCCCAC 59.823 55.0 10.83 0.00 34.68 4.61 F
138 139 0.179029 AAAACAGGTGCGCCACTAGT 60.179 50.0 20.59 8.46 37.19 2.57 F
1735 2275 0.179034 GATGCCCTGACCCTGATGTC 60.179 60.0 0.00 0.00 35.77 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1738 2278 0.997196 GCGAGACGGTAAATGGACAC 59.003 55.0 0.00 0.00 0.00 3.67 R
1826 2369 1.835927 GCACCTTGGAGCTCCTCAGT 61.836 60.0 32.28 22.38 36.82 3.41 R
2567 4283 0.179065 GGGGTGTGGGCGTTATCTAC 60.179 60.0 0.00 0.00 0.00 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.717485 GACGCACCGTCGGCTATA 59.283 61.111 12.28 0.00 46.56 1.31
22 23 1.656569 GACGCACCGTCGGCTATAC 60.657 63.158 12.28 0.00 46.56 1.47
23 24 2.056481 GACGCACCGTCGGCTATACT 62.056 60.000 12.28 0.00 46.56 2.12
24 25 0.815213 ACGCACCGTCGGCTATACTA 60.815 55.000 12.28 0.00 33.69 1.82
25 26 0.308684 CGCACCGTCGGCTATACTAA 59.691 55.000 12.28 0.00 0.00 2.24
26 27 1.068748 CGCACCGTCGGCTATACTAAT 60.069 52.381 12.28 0.00 0.00 1.73
27 28 2.325761 GCACCGTCGGCTATACTAATG 58.674 52.381 12.28 0.00 0.00 1.90
28 29 2.925306 GCACCGTCGGCTATACTAATGG 60.925 54.545 12.28 0.00 0.00 3.16
29 30 1.271656 ACCGTCGGCTATACTAATGGC 59.728 52.381 12.28 0.00 38.79 4.40
31 32 1.347320 GTCGGCTATACTAATGGCGC 58.653 55.000 0.00 0.00 46.75 6.53
32 33 0.963225 TCGGCTATACTAATGGCGCA 59.037 50.000 10.83 0.00 46.75 6.09
33 34 1.068474 CGGCTATACTAATGGCGCAC 58.932 55.000 10.83 0.00 40.33 5.34
34 35 1.336887 CGGCTATACTAATGGCGCACT 60.337 52.381 10.83 0.00 40.33 4.40
35 36 2.338500 GGCTATACTAATGGCGCACTC 58.662 52.381 10.83 0.00 40.33 3.51
36 37 2.338500 GCTATACTAATGGCGCACTCC 58.662 52.381 10.83 0.00 29.24 3.85
37 38 2.931320 GCTATACTAATGGCGCACTCCC 60.931 54.545 10.83 0.00 29.24 4.30
38 39 1.128200 ATACTAATGGCGCACTCCCA 58.872 50.000 10.83 0.00 36.66 4.37
39 40 0.177141 TACTAATGGCGCACTCCCAC 59.823 55.000 10.83 0.00 34.68 4.61
40 41 2.125310 TAATGGCGCACTCCCACG 60.125 61.111 10.83 0.00 34.68 4.94
41 42 3.673956 TAATGGCGCACTCCCACGG 62.674 63.158 10.83 0.00 34.68 4.94
48 49 3.625897 CACTCCCACGGTGCTCCA 61.626 66.667 5.52 0.00 0.00 3.86
49 50 2.607750 ACTCCCACGGTGCTCCAT 60.608 61.111 5.52 0.00 0.00 3.41
50 51 2.224159 ACTCCCACGGTGCTCCATT 61.224 57.895 5.52 0.00 0.00 3.16
51 52 0.907704 ACTCCCACGGTGCTCCATTA 60.908 55.000 5.52 0.00 0.00 1.90
52 53 0.179073 CTCCCACGGTGCTCCATTAG 60.179 60.000 5.52 0.00 0.00 1.73
53 54 0.907704 TCCCACGGTGCTCCATTAGT 60.908 55.000 5.52 0.00 0.00 2.24
54 55 0.828022 CCCACGGTGCTCCATTAGTA 59.172 55.000 5.52 0.00 0.00 1.82
55 56 1.416401 CCCACGGTGCTCCATTAGTAT 59.584 52.381 5.52 0.00 0.00 2.12
56 57 2.631062 CCCACGGTGCTCCATTAGTATA 59.369 50.000 5.52 0.00 0.00 1.47
57 58 3.554337 CCCACGGTGCTCCATTAGTATAC 60.554 52.174 5.52 0.00 0.00 1.47
58 59 3.554337 CCACGGTGCTCCATTAGTATACC 60.554 52.174 5.52 0.00 0.00 2.73
59 60 3.069016 CACGGTGCTCCATTAGTATACCA 59.931 47.826 5.52 0.00 0.00 3.25
60 61 3.321111 ACGGTGCTCCATTAGTATACCAG 59.679 47.826 5.52 0.00 0.00 4.00
61 62 3.572682 CGGTGCTCCATTAGTATACCAGA 59.427 47.826 5.52 0.00 0.00 3.86
62 63 4.220821 CGGTGCTCCATTAGTATACCAGAT 59.779 45.833 5.52 0.00 0.00 2.90
63 64 5.417894 CGGTGCTCCATTAGTATACCAGATA 59.582 44.000 5.52 0.00 0.00 1.98
64 65 6.625300 CGGTGCTCCATTAGTATACCAGATAC 60.625 46.154 5.52 0.00 0.00 2.24
65 66 6.437793 GGTGCTCCATTAGTATACCAGATACT 59.562 42.308 0.00 2.98 38.32 2.12
66 67 7.614583 GGTGCTCCATTAGTATACCAGATACTA 59.385 40.741 0.00 1.20 36.38 1.82
67 68 9.021807 GTGCTCCATTAGTATACCAGATACTAA 57.978 37.037 15.81 15.81 45.52 2.24
80 81 7.299246 ACCAGATACTAATTACTAATGGCGT 57.701 36.000 0.00 0.00 0.00 5.68
81 82 7.152645 ACCAGATACTAATTACTAATGGCGTG 58.847 38.462 0.00 0.00 0.00 5.34
82 83 6.090898 CCAGATACTAATTACTAATGGCGTGC 59.909 42.308 0.00 0.00 0.00 5.34
83 84 6.868864 CAGATACTAATTACTAATGGCGTGCT 59.131 38.462 0.00 0.00 0.00 4.40
84 85 8.027189 CAGATACTAATTACTAATGGCGTGCTA 58.973 37.037 0.00 0.00 0.00 3.49
85 86 8.244802 AGATACTAATTACTAATGGCGTGCTAG 58.755 37.037 0.00 0.00 0.00 3.42
86 87 6.158023 ACTAATTACTAATGGCGTGCTAGT 57.842 37.500 0.00 0.00 0.00 2.57
87 88 7.281040 ACTAATTACTAATGGCGTGCTAGTA 57.719 36.000 0.00 0.00 0.00 1.82
88 89 7.368833 ACTAATTACTAATGGCGTGCTAGTAG 58.631 38.462 10.50 10.50 31.54 2.57
89 90 5.786264 ATTACTAATGGCGTGCTAGTAGT 57.214 39.130 19.39 19.39 40.39 2.73
90 91 3.438297 ACTAATGGCGTGCTAGTAGTG 57.562 47.619 15.81 0.00 37.05 2.74
91 92 2.100916 ACTAATGGCGTGCTAGTAGTGG 59.899 50.000 15.81 0.00 37.05 4.00
92 93 0.462047 AATGGCGTGCTAGTAGTGGC 60.462 55.000 0.00 0.00 0.00 5.01
93 94 2.582498 GGCGTGCTAGTAGTGGCG 60.582 66.667 1.10 2.86 31.29 5.69
94 95 3.255379 GCGTGCTAGTAGTGGCGC 61.255 66.667 9.27 9.27 37.32 6.53
95 96 2.180769 CGTGCTAGTAGTGGCGCA 59.819 61.111 18.12 3.96 40.54 6.09
96 97 2.158959 CGTGCTAGTAGTGGCGCAC 61.159 63.158 18.12 13.62 46.74 5.34
97 98 1.810030 GTGCTAGTAGTGGCGCACC 60.810 63.158 10.83 0.00 45.08 5.01
98 99 1.982395 TGCTAGTAGTGGCGCACCT 60.982 57.895 10.83 6.50 34.49 4.00
99 100 1.519455 GCTAGTAGTGGCGCACCTG 60.519 63.158 10.83 0.00 34.49 4.00
100 101 1.890894 CTAGTAGTGGCGCACCTGT 59.109 57.895 10.83 0.00 34.49 4.00
101 102 1.100510 CTAGTAGTGGCGCACCTGTA 58.899 55.000 10.83 0.00 34.49 2.74
102 103 1.065701 CTAGTAGTGGCGCACCTGTAG 59.934 57.143 10.83 6.12 34.49 2.74
103 104 1.810030 GTAGTGGCGCACCTGTAGC 60.810 63.158 10.83 0.00 34.49 3.58
110 111 2.436646 GCACCTGTAGCGCACCAT 60.437 61.111 11.47 0.00 0.00 3.55
111 112 2.040544 GCACCTGTAGCGCACCATT 61.041 57.895 11.47 0.00 0.00 3.16
112 113 0.742990 GCACCTGTAGCGCACCATTA 60.743 55.000 11.47 0.00 0.00 1.90
113 114 1.290203 CACCTGTAGCGCACCATTAG 58.710 55.000 11.47 0.00 0.00 1.73
114 115 0.902531 ACCTGTAGCGCACCATTAGT 59.097 50.000 11.47 0.75 0.00 2.24
115 116 2.104967 ACCTGTAGCGCACCATTAGTA 58.895 47.619 11.47 0.00 0.00 1.82
116 117 2.100916 ACCTGTAGCGCACCATTAGTAG 59.899 50.000 11.47 0.00 0.00 2.57
117 118 2.545952 CCTGTAGCGCACCATTAGTAGG 60.546 54.545 11.47 3.27 0.00 3.18
118 119 1.202486 TGTAGCGCACCATTAGTAGGC 60.202 52.381 11.47 0.00 0.00 3.93
119 120 1.116308 TAGCGCACCATTAGTAGGCA 58.884 50.000 11.47 0.00 0.00 4.75
120 121 0.251916 AGCGCACCATTAGTAGGCAA 59.748 50.000 11.47 0.00 0.00 4.52
121 122 1.091537 GCGCACCATTAGTAGGCAAA 58.908 50.000 0.30 0.00 0.00 3.68
122 123 1.470890 GCGCACCATTAGTAGGCAAAA 59.529 47.619 0.30 0.00 0.00 2.44
123 124 2.731027 GCGCACCATTAGTAGGCAAAAC 60.731 50.000 0.30 0.00 0.00 2.43
124 125 2.486203 CGCACCATTAGTAGGCAAAACA 59.514 45.455 0.00 0.00 0.00 2.83
125 126 3.426159 CGCACCATTAGTAGGCAAAACAG 60.426 47.826 0.00 0.00 0.00 3.16
126 127 3.119495 GCACCATTAGTAGGCAAAACAGG 60.119 47.826 0.00 0.00 0.00 4.00
127 128 4.079253 CACCATTAGTAGGCAAAACAGGT 58.921 43.478 0.00 0.00 0.00 4.00
128 129 4.079253 ACCATTAGTAGGCAAAACAGGTG 58.921 43.478 0.00 0.00 0.00 4.00
129 130 3.119495 CCATTAGTAGGCAAAACAGGTGC 60.119 47.826 0.00 0.00 41.45 5.01
130 131 1.803334 TAGTAGGCAAAACAGGTGCG 58.197 50.000 0.00 0.00 43.18 5.34
131 132 1.081442 GTAGGCAAAACAGGTGCGC 60.081 57.895 0.00 0.00 43.18 6.09
132 133 2.265182 TAGGCAAAACAGGTGCGCC 61.265 57.895 8.71 8.71 43.18 6.53
133 134 2.967507 TAGGCAAAACAGGTGCGCCA 62.968 55.000 20.59 0.00 45.47 5.69
134 135 2.658268 GCAAAACAGGTGCGCCAC 60.658 61.111 20.59 2.79 37.19 5.01
135 136 3.119193 CAAAACAGGTGCGCCACT 58.881 55.556 20.59 0.00 37.19 4.00
136 137 1.791103 GCAAAACAGGTGCGCCACTA 61.791 55.000 20.59 0.00 37.19 2.74
137 138 0.238289 CAAAACAGGTGCGCCACTAG 59.762 55.000 20.59 7.78 37.19 2.57
138 139 0.179029 AAAACAGGTGCGCCACTAGT 60.179 50.000 20.59 8.46 37.19 2.57
139 140 0.682852 AAACAGGTGCGCCACTAGTA 59.317 50.000 20.59 0.00 37.19 1.82
140 141 0.246635 AACAGGTGCGCCACTAGTAG 59.753 55.000 20.59 0.00 37.19 2.57
141 142 1.141881 CAGGTGCGCCACTAGTAGG 59.858 63.158 20.59 0.70 37.19 3.18
149 150 2.039818 GCCACTAGTAGGCCTTTTCC 57.960 55.000 12.58 0.00 46.50 3.13
150 151 1.560146 GCCACTAGTAGGCCTTTTCCT 59.440 52.381 12.58 4.76 46.50 3.36
151 152 2.770232 GCCACTAGTAGGCCTTTTCCTA 59.230 50.000 12.58 5.78 46.50 2.94
152 153 3.181464 GCCACTAGTAGGCCTTTTCCTAG 60.181 52.174 12.58 17.23 46.50 3.02
153 154 4.031611 CCACTAGTAGGCCTTTTCCTAGT 58.968 47.826 12.58 17.87 43.10 2.57
154 155 5.206587 CCACTAGTAGGCCTTTTCCTAGTA 58.793 45.833 22.95 8.80 41.40 1.82
158 159 4.685807 AGTAGGCCTTTTCCTAGTAGTGT 58.314 43.478 12.58 0.00 39.85 3.55
159 160 4.710865 AGTAGGCCTTTTCCTAGTAGTGTC 59.289 45.833 12.58 0.00 39.85 3.67
160 161 3.792515 AGGCCTTTTCCTAGTAGTGTCT 58.207 45.455 0.00 0.00 33.95 3.41
161 162 3.515901 AGGCCTTTTCCTAGTAGTGTCTG 59.484 47.826 0.00 0.00 33.95 3.51
162 163 3.514309 GGCCTTTTCCTAGTAGTGTCTGA 59.486 47.826 0.00 0.00 0.00 3.27
163 164 4.382147 GGCCTTTTCCTAGTAGTGTCTGAG 60.382 50.000 0.00 0.00 0.00 3.35
164 165 4.463186 GCCTTTTCCTAGTAGTGTCTGAGA 59.537 45.833 0.00 0.00 0.00 3.27
165 166 5.622687 GCCTTTTCCTAGTAGTGTCTGAGAC 60.623 48.000 5.47 5.47 0.00 3.36
166 167 5.105675 CCTTTTCCTAGTAGTGTCTGAGACC 60.106 48.000 10.52 1.54 0.00 3.85
167 168 4.652679 TTCCTAGTAGTGTCTGAGACCA 57.347 45.455 10.52 0.00 0.00 4.02
168 169 4.864483 TCCTAGTAGTGTCTGAGACCAT 57.136 45.455 10.52 0.89 0.00 3.55
169 170 4.527944 TCCTAGTAGTGTCTGAGACCATG 58.472 47.826 10.52 0.00 0.00 3.66
170 171 3.067461 CCTAGTAGTGTCTGAGACCATGC 59.933 52.174 10.52 2.25 0.00 4.06
171 172 2.529632 AGTAGTGTCTGAGACCATGCA 58.470 47.619 10.52 0.00 0.00 3.96
172 173 3.102972 AGTAGTGTCTGAGACCATGCAT 58.897 45.455 10.52 0.00 0.00 3.96
173 174 3.517100 AGTAGTGTCTGAGACCATGCATT 59.483 43.478 10.52 0.00 0.00 3.56
174 175 3.430042 AGTGTCTGAGACCATGCATTT 57.570 42.857 10.52 0.00 0.00 2.32
175 176 3.759581 AGTGTCTGAGACCATGCATTTT 58.240 40.909 10.52 0.00 0.00 1.82
176 177 4.147321 AGTGTCTGAGACCATGCATTTTT 58.853 39.130 10.52 0.00 0.00 1.94
177 178 4.217118 AGTGTCTGAGACCATGCATTTTTC 59.783 41.667 10.52 0.00 0.00 2.29
178 179 4.217118 GTGTCTGAGACCATGCATTTTTCT 59.783 41.667 10.52 0.00 0.00 2.52
179 180 4.828939 TGTCTGAGACCATGCATTTTTCTT 59.171 37.500 10.52 0.00 0.00 2.52
180 181 5.302568 TGTCTGAGACCATGCATTTTTCTTT 59.697 36.000 10.52 0.00 0.00 2.52
181 182 6.183360 TGTCTGAGACCATGCATTTTTCTTTT 60.183 34.615 10.52 0.00 0.00 2.27
182 183 6.703165 GTCTGAGACCATGCATTTTTCTTTTT 59.297 34.615 0.00 0.00 0.00 1.94
183 184 6.925165 TCTGAGACCATGCATTTTTCTTTTTC 59.075 34.615 0.00 0.00 0.00 2.29
184 185 5.691305 TGAGACCATGCATTTTTCTTTTTCG 59.309 36.000 0.00 0.00 0.00 3.46
185 186 5.600696 AGACCATGCATTTTTCTTTTTCGT 58.399 33.333 0.00 0.00 0.00 3.85
186 187 6.744112 AGACCATGCATTTTTCTTTTTCGTA 58.256 32.000 0.00 0.00 0.00 3.43
187 188 6.640907 AGACCATGCATTTTTCTTTTTCGTAC 59.359 34.615 0.00 0.00 0.00 3.67
188 189 6.512297 ACCATGCATTTTTCTTTTTCGTACT 58.488 32.000 0.00 0.00 0.00 2.73
189 190 7.653647 ACCATGCATTTTTCTTTTTCGTACTA 58.346 30.769 0.00 0.00 0.00 1.82
190 191 7.807907 ACCATGCATTTTTCTTTTTCGTACTAG 59.192 33.333 0.00 0.00 0.00 2.57
191 192 8.020819 CCATGCATTTTTCTTTTTCGTACTAGA 58.979 33.333 0.00 0.00 0.00 2.43
192 193 9.393249 CATGCATTTTTCTTTTTCGTACTAGAA 57.607 29.630 0.00 0.00 0.00 2.10
193 194 8.776680 TGCATTTTTCTTTTTCGTACTAGAAC 57.223 30.769 0.00 0.00 0.00 3.01
194 195 8.399425 TGCATTTTTCTTTTTCGTACTAGAACA 58.601 29.630 0.00 0.00 0.00 3.18
195 196 9.228636 GCATTTTTCTTTTTCGTACTAGAACAA 57.771 29.630 0.00 0.00 0.00 2.83
201 202 8.665175 TCTTTTTCGTACTAGAACAATACTCG 57.335 34.615 0.00 0.00 0.00 4.18
202 203 8.292448 TCTTTTTCGTACTAGAACAATACTCGT 58.708 33.333 0.00 0.00 0.00 4.18
203 204 7.786305 TTTTCGTACTAGAACAATACTCGTG 57.214 36.000 0.00 0.00 0.00 4.35
204 205 4.901814 TCGTACTAGAACAATACTCGTGC 58.098 43.478 0.00 0.00 0.00 5.34
205 206 4.633126 TCGTACTAGAACAATACTCGTGCT 59.367 41.667 0.00 0.00 0.00 4.40
206 207 5.122869 TCGTACTAGAACAATACTCGTGCTT 59.877 40.000 0.00 0.00 0.00 3.91
207 208 5.798934 CGTACTAGAACAATACTCGTGCTTT 59.201 40.000 0.00 0.00 0.00 3.51
208 209 6.237227 CGTACTAGAACAATACTCGTGCTTTG 60.237 42.308 0.00 0.00 0.00 2.77
209 210 3.813529 AGAACAATACTCGTGCTTTGC 57.186 42.857 0.00 0.00 0.00 3.68
210 211 3.138304 AGAACAATACTCGTGCTTTGCA 58.862 40.909 0.00 0.00 35.60 4.08
211 212 3.563808 AGAACAATACTCGTGCTTTGCAA 59.436 39.130 0.00 0.00 41.47 4.08
212 213 4.216257 AGAACAATACTCGTGCTTTGCAAT 59.784 37.500 0.00 0.00 41.47 3.56
213 214 3.825308 ACAATACTCGTGCTTTGCAATG 58.175 40.909 0.00 3.50 41.47 2.82
214 215 3.173599 CAATACTCGTGCTTTGCAATGG 58.826 45.455 13.62 5.18 41.47 3.16
215 216 1.164411 TACTCGTGCTTTGCAATGGG 58.836 50.000 13.62 2.81 41.47 4.00
216 217 0.537143 ACTCGTGCTTTGCAATGGGA 60.537 50.000 13.62 2.57 41.47 4.37
217 218 0.813184 CTCGTGCTTTGCAATGGGAT 59.187 50.000 13.62 0.00 41.47 3.85
218 219 2.016318 CTCGTGCTTTGCAATGGGATA 58.984 47.619 13.62 0.00 41.47 2.59
219 220 2.620115 CTCGTGCTTTGCAATGGGATAT 59.380 45.455 13.62 0.00 41.47 1.63
220 221 3.814625 TCGTGCTTTGCAATGGGATATA 58.185 40.909 13.62 0.00 41.47 0.86
221 222 4.203226 TCGTGCTTTGCAATGGGATATAA 58.797 39.130 13.62 0.00 41.47 0.98
222 223 4.642437 TCGTGCTTTGCAATGGGATATAAA 59.358 37.500 13.62 0.00 41.47 1.40
223 224 5.301551 TCGTGCTTTGCAATGGGATATAAAT 59.698 36.000 13.62 0.00 41.47 1.40
224 225 5.630680 CGTGCTTTGCAATGGGATATAAATC 59.369 40.000 13.62 0.00 41.47 2.17
225 226 6.515531 CGTGCTTTGCAATGGGATATAAATCT 60.516 38.462 13.62 0.00 41.47 2.40
226 227 7.212274 GTGCTTTGCAATGGGATATAAATCTT 58.788 34.615 13.62 0.00 41.47 2.40
227 228 7.383300 GTGCTTTGCAATGGGATATAAATCTTC 59.617 37.037 13.62 0.00 41.47 2.87
228 229 7.288389 TGCTTTGCAATGGGATATAAATCTTCT 59.712 33.333 13.62 0.00 34.76 2.85
229 230 8.796475 GCTTTGCAATGGGATATAAATCTTCTA 58.204 33.333 13.62 0.00 32.29 2.10
238 239 9.017509 TGGGATATAAATCTTCTAATACGTCGT 57.982 33.333 2.21 2.21 32.29 4.34
239 240 9.852091 GGGATATAAATCTTCTAATACGTCGTT 57.148 33.333 1.78 0.00 32.29 3.85
245 246 7.878477 AATCTTCTAATACGTCGTTTTGTGA 57.122 32.000 1.78 2.90 0.00 3.58
246 247 8.475331 AATCTTCTAATACGTCGTTTTGTGAT 57.525 30.769 1.78 3.07 0.00 3.06
247 248 7.878477 TCTTCTAATACGTCGTTTTGTGATT 57.122 32.000 1.78 0.00 0.00 2.57
248 249 8.301730 TCTTCTAATACGTCGTTTTGTGATTT 57.698 30.769 1.78 0.00 0.00 2.17
249 250 9.409312 TCTTCTAATACGTCGTTTTGTGATTTA 57.591 29.630 1.78 0.00 0.00 1.40
250 251 9.456797 CTTCTAATACGTCGTTTTGTGATTTAC 57.543 33.333 1.78 0.00 0.00 2.01
251 252 8.746922 TCTAATACGTCGTTTTGTGATTTACT 57.253 30.769 1.78 0.00 0.00 2.24
252 253 9.195411 TCTAATACGTCGTTTTGTGATTTACTT 57.805 29.630 1.78 0.00 0.00 2.24
253 254 9.246423 CTAATACGTCGTTTTGTGATTTACTTG 57.754 33.333 1.78 0.00 0.00 3.16
254 255 5.473796 ACGTCGTTTTGTGATTTACTTGT 57.526 34.783 0.00 0.00 0.00 3.16
255 256 5.495502 ACGTCGTTTTGTGATTTACTTGTC 58.504 37.500 0.00 0.00 0.00 3.18
256 257 5.292589 ACGTCGTTTTGTGATTTACTTGTCT 59.707 36.000 0.00 0.00 0.00 3.41
257 258 6.476380 ACGTCGTTTTGTGATTTACTTGTCTA 59.524 34.615 0.00 0.00 0.00 2.59
258 259 7.170320 ACGTCGTTTTGTGATTTACTTGTCTAT 59.830 33.333 0.00 0.00 0.00 1.98
259 260 8.641155 CGTCGTTTTGTGATTTACTTGTCTATA 58.359 33.333 0.00 0.00 0.00 1.31
274 275 8.662781 ACTTGTCTATAATAATGCGATTGTGT 57.337 30.769 0.00 0.00 0.00 3.72
275 276 9.758651 ACTTGTCTATAATAATGCGATTGTGTA 57.241 29.630 0.00 0.00 0.00 2.90
286 287 7.985634 AATGCGATTGTGTAAATAAATGGTC 57.014 32.000 0.00 0.00 0.00 4.02
287 288 6.502136 TGCGATTGTGTAAATAAATGGTCA 57.498 33.333 0.00 0.00 0.00 4.02
288 289 7.094508 TGCGATTGTGTAAATAAATGGTCAT 57.905 32.000 0.00 0.00 0.00 3.06
289 290 7.192913 TGCGATTGTGTAAATAAATGGTCATC 58.807 34.615 0.00 0.00 0.00 2.92
290 291 7.148171 TGCGATTGTGTAAATAAATGGTCATCA 60.148 33.333 0.00 0.00 0.00 3.07
291 292 7.700234 GCGATTGTGTAAATAAATGGTCATCAA 59.300 33.333 0.00 0.00 0.00 2.57
292 293 9.566530 CGATTGTGTAAATAAATGGTCATCAAA 57.433 29.630 0.00 0.00 0.00 2.69
301 302 9.504708 AAATAAATGGTCATCAAATTTTGCTCA 57.495 25.926 4.19 0.00 0.00 4.26
302 303 9.675464 AATAAATGGTCATCAAATTTTGCTCAT 57.325 25.926 4.19 1.80 0.00 2.90
334 335 9.470399 ACCTTATATTTTTATCCGAAGTTTGGT 57.530 29.630 9.09 0.00 0.00 3.67
370 371 8.762481 AAATGAAACTGGTTAAGAAGGTAAGT 57.238 30.769 0.00 0.00 0.00 2.24
371 372 9.856162 AAATGAAACTGGTTAAGAAGGTAAGTA 57.144 29.630 0.00 0.00 0.00 2.24
372 373 9.856162 AATGAAACTGGTTAAGAAGGTAAGTAA 57.144 29.630 0.00 0.00 0.00 2.24
373 374 9.856162 ATGAAACTGGTTAAGAAGGTAAGTAAA 57.144 29.630 0.00 0.00 0.00 2.01
374 375 9.856162 TGAAACTGGTTAAGAAGGTAAGTAAAT 57.144 29.630 0.00 0.00 0.00 1.40
409 410 8.974060 TTATTATCATACAAGGAAGGTTGGAC 57.026 34.615 0.00 0.00 0.00 4.02
410 411 3.328382 TCATACAAGGAAGGTTGGACG 57.672 47.619 0.00 0.00 0.00 4.79
411 412 2.901192 TCATACAAGGAAGGTTGGACGA 59.099 45.455 0.00 0.00 0.00 4.20
412 413 3.325425 TCATACAAGGAAGGTTGGACGAA 59.675 43.478 0.00 0.00 0.00 3.85
413 414 2.256117 ACAAGGAAGGTTGGACGAAG 57.744 50.000 0.00 0.00 0.00 3.79
414 415 1.202770 ACAAGGAAGGTTGGACGAAGG 60.203 52.381 0.00 0.00 0.00 3.46
415 416 0.400594 AAGGAAGGTTGGACGAAGGG 59.599 55.000 0.00 0.00 0.00 3.95
416 417 1.002502 GGAAGGTTGGACGAAGGGG 60.003 63.158 0.00 0.00 0.00 4.79
417 418 1.759236 GAAGGTTGGACGAAGGGGT 59.241 57.895 0.00 0.00 0.00 4.95
418 419 0.605589 GAAGGTTGGACGAAGGGGTG 60.606 60.000 0.00 0.00 0.00 4.61
419 420 2.033602 GGTTGGACGAAGGGGTGG 59.966 66.667 0.00 0.00 0.00 4.61
420 421 2.826003 GGTTGGACGAAGGGGTGGT 61.826 63.158 0.00 0.00 0.00 4.16
421 422 1.599797 GTTGGACGAAGGGGTGGTG 60.600 63.158 0.00 0.00 0.00 4.17
422 423 2.824880 TTGGACGAAGGGGTGGTGG 61.825 63.158 0.00 0.00 0.00 4.61
423 424 4.029809 GGACGAAGGGGTGGTGGG 62.030 72.222 0.00 0.00 0.00 4.61
424 425 2.926242 GACGAAGGGGTGGTGGGA 60.926 66.667 0.00 0.00 0.00 4.37
425 426 2.448931 ACGAAGGGGTGGTGGGAA 60.449 61.111 0.00 0.00 0.00 3.97
426 427 2.351276 CGAAGGGGTGGTGGGAAG 59.649 66.667 0.00 0.00 0.00 3.46
427 428 2.221299 CGAAGGGGTGGTGGGAAGA 61.221 63.158 0.00 0.00 0.00 2.87
428 429 1.774894 CGAAGGGGTGGTGGGAAGAA 61.775 60.000 0.00 0.00 0.00 2.52
429 430 0.481128 GAAGGGGTGGTGGGAAGAAA 59.519 55.000 0.00 0.00 0.00 2.52
430 431 0.482887 AAGGGGTGGTGGGAAGAAAG 59.517 55.000 0.00 0.00 0.00 2.62
431 432 1.076727 GGGGTGGTGGGAAGAAAGG 59.923 63.158 0.00 0.00 0.00 3.11
432 433 1.726192 GGGGTGGTGGGAAGAAAGGT 61.726 60.000 0.00 0.00 0.00 3.50
433 434 0.539669 GGGTGGTGGGAAGAAAGGTG 60.540 60.000 0.00 0.00 0.00 4.00
434 435 0.476771 GGTGGTGGGAAGAAAGGTGA 59.523 55.000 0.00 0.00 0.00 4.02
435 436 1.133606 GGTGGTGGGAAGAAAGGTGAA 60.134 52.381 0.00 0.00 0.00 3.18
436 437 2.661718 GTGGTGGGAAGAAAGGTGAAA 58.338 47.619 0.00 0.00 0.00 2.69
437 438 3.230976 GTGGTGGGAAGAAAGGTGAAAT 58.769 45.455 0.00 0.00 0.00 2.17
438 439 3.005791 GTGGTGGGAAGAAAGGTGAAATG 59.994 47.826 0.00 0.00 0.00 2.32
439 440 3.117322 TGGTGGGAAGAAAGGTGAAATGA 60.117 43.478 0.00 0.00 0.00 2.57
440 441 3.507622 GGTGGGAAGAAAGGTGAAATGAG 59.492 47.826 0.00 0.00 0.00 2.90
441 442 4.398319 GTGGGAAGAAAGGTGAAATGAGA 58.602 43.478 0.00 0.00 0.00 3.27
442 443 4.827284 GTGGGAAGAAAGGTGAAATGAGAA 59.173 41.667 0.00 0.00 0.00 2.87
443 444 4.827284 TGGGAAGAAAGGTGAAATGAGAAC 59.173 41.667 0.00 0.00 0.00 3.01
444 445 4.218635 GGGAAGAAAGGTGAAATGAGAACC 59.781 45.833 0.00 0.00 0.00 3.62
445 446 5.073428 GGAAGAAAGGTGAAATGAGAACCT 58.927 41.667 0.00 0.00 46.40 3.50
451 452 4.969484 AGGTGAAATGAGAACCTTACGTT 58.031 39.130 0.00 0.00 41.65 3.99
481 482 8.514594 CATCCTGAAATTTTACACACATACACT 58.485 33.333 0.00 0.00 0.00 3.55
489 490 6.795098 TTTACACACATACACTTCACATCC 57.205 37.500 0.00 0.00 0.00 3.51
502 504 7.927048 ACACTTCACATCCTTTTTACTTGTAC 58.073 34.615 0.00 0.00 0.00 2.90
563 565 6.930722 TCTTTTTCAAAAATTCAGCCTCCATC 59.069 34.615 0.00 0.00 0.00 3.51
565 567 3.684908 TCAAAAATTCAGCCTCCATCGA 58.315 40.909 0.00 0.00 0.00 3.59
726 728 0.249868 TGCTGTACTGCGAGCTGTTT 60.250 50.000 18.40 0.00 36.11 2.83
751 758 1.446618 GGCAAATTCAGCTTGGGCG 60.447 57.895 3.27 0.00 44.37 6.13
812 856 3.388308 CCATTCATGGCAACGACAAAAA 58.612 40.909 0.00 0.00 41.75 1.94
813 857 3.995705 CCATTCATGGCAACGACAAAAAT 59.004 39.130 0.00 0.00 41.75 1.82
887 953 5.273208 AGCTGTATATACTCCAATCCCGAT 58.727 41.667 13.89 0.00 0.00 4.18
1102 1172 0.322906 CAGAAAAGGGGTGAGGAGCC 60.323 60.000 0.00 0.00 39.24 4.70
1269 1339 1.663379 CGTCCACGGGTGAGATAGCA 61.663 60.000 0.00 0.00 35.37 3.49
1273 1343 1.207089 CCACGGGTGAGATAGCAAAGA 59.793 52.381 0.00 0.00 0.00 2.52
1281 1351 4.384647 GGTGAGATAGCAAAGAAGGTGGAT 60.385 45.833 0.00 0.00 0.00 3.41
1451 1970 2.492090 CTCGACTCTCCGGGCAAG 59.508 66.667 0.00 0.00 0.00 4.01
1732 2272 3.112205 GCGATGCCCTGACCCTGAT 62.112 63.158 0.00 0.00 0.00 2.90
1733 2273 1.227764 CGATGCCCTGACCCTGATG 60.228 63.158 0.00 0.00 0.00 3.07
1734 2274 1.918253 GATGCCCTGACCCTGATGT 59.082 57.895 0.00 0.00 0.00 3.06
1735 2275 0.179034 GATGCCCTGACCCTGATGTC 60.179 60.000 0.00 0.00 35.77 3.06
1736 2276 1.639635 ATGCCCTGACCCTGATGTCC 61.640 60.000 0.00 0.00 34.25 4.02
1737 2277 2.300967 GCCCTGACCCTGATGTCCA 61.301 63.158 0.00 0.00 34.25 4.02
1738 2278 1.910722 CCCTGACCCTGATGTCCAG 59.089 63.158 0.00 0.00 42.55 3.86
1878 2430 0.462759 GGAATTGGTGGAGAGGAGCG 60.463 60.000 0.00 0.00 0.00 5.03
1879 2431 0.537188 GAATTGGTGGAGAGGAGCGA 59.463 55.000 0.00 0.00 0.00 4.93
1880 2432 0.539051 AATTGGTGGAGAGGAGCGAG 59.461 55.000 0.00 0.00 0.00 5.03
1881 2433 1.965754 ATTGGTGGAGAGGAGCGAGC 61.966 60.000 0.00 0.00 0.00 5.03
1882 2434 2.757917 GGTGGAGAGGAGCGAGCT 60.758 66.667 0.00 0.00 0.00 4.09
1883 2435 2.493973 GTGGAGAGGAGCGAGCTG 59.506 66.667 0.84 0.00 0.00 4.24
1884 2436 2.049185 GTGGAGAGGAGCGAGCTGA 61.049 63.158 0.84 0.00 0.00 4.26
1885 2437 1.752310 TGGAGAGGAGCGAGCTGAG 60.752 63.158 0.84 0.00 0.00 3.35
1886 2438 2.412937 GAGAGGAGCGAGCTGAGC 59.587 66.667 0.84 0.00 0.00 4.26
2131 2689 3.374042 TGAGAAGGAGAGGATCGAGTT 57.626 47.619 0.00 0.00 42.67 3.01
2208 2766 1.080025 GCCTACGTTGTCGGCTTCT 60.080 57.895 0.00 0.00 40.58 2.85
2285 2843 4.436998 CTCGCGGGAAGGCTCGTT 62.437 66.667 0.00 0.00 41.04 3.85
2350 2908 5.003804 AGTAGTACATTTGAGGCAACCAAG 58.996 41.667 2.52 0.00 37.17 3.61
2352 2910 4.666512 AGTACATTTGAGGCAACCAAGAT 58.333 39.130 0.00 0.00 37.17 2.40
2357 2915 2.877097 TGAGGCAACCAAGATAGCAA 57.123 45.000 0.00 0.00 37.17 3.91
2359 2917 2.305635 TGAGGCAACCAAGATAGCAAGA 59.694 45.455 0.00 0.00 37.17 3.02
2360 2918 2.941720 GAGGCAACCAAGATAGCAAGAG 59.058 50.000 0.00 0.00 37.17 2.85
2361 2919 1.403323 GGCAACCAAGATAGCAAGAGC 59.597 52.381 0.00 0.00 42.56 4.09
2362 2920 2.086869 GCAACCAAGATAGCAAGAGCA 58.913 47.619 0.00 0.00 45.49 4.26
2363 2921 2.686915 GCAACCAAGATAGCAAGAGCAT 59.313 45.455 0.00 0.00 45.49 3.79
2364 2922 3.879295 GCAACCAAGATAGCAAGAGCATA 59.121 43.478 0.00 0.00 45.49 3.14
2365 2923 4.518211 GCAACCAAGATAGCAAGAGCATAT 59.482 41.667 0.00 0.00 45.49 1.78
2366 2924 5.334724 GCAACCAAGATAGCAAGAGCATATC 60.335 44.000 0.00 0.00 45.49 1.63
2437 3761 7.681939 TGACAGTACAAAGAACAAAAGAAGT 57.318 32.000 0.00 0.00 0.00 3.01
2439 3763 9.221933 TGACAGTACAAAGAACAAAAGAAGTAA 57.778 29.630 0.00 0.00 0.00 2.24
2455 3779 9.850628 AAAAGAAGTAATAAAAATTAGGACGCC 57.149 29.630 0.00 0.00 0.00 5.68
2456 3780 7.242914 AGAAGTAATAAAAATTAGGACGCCG 57.757 36.000 0.00 0.00 0.00 6.46
2457 3781 7.043565 AGAAGTAATAAAAATTAGGACGCCGA 58.956 34.615 0.00 0.00 0.00 5.54
2458 3782 7.713942 AGAAGTAATAAAAATTAGGACGCCGAT 59.286 33.333 0.00 0.00 0.00 4.18
2460 3784 8.530269 AGTAATAAAAATTAGGACGCCGATAG 57.470 34.615 0.00 0.00 0.00 2.08
2461 3785 8.146412 AGTAATAAAAATTAGGACGCCGATAGT 58.854 33.333 0.00 0.00 0.00 2.12
2462 3786 6.780706 ATAAAAATTAGGACGCCGATAGTG 57.219 37.500 0.00 0.00 0.00 2.74
2463 3787 2.150397 AATTAGGACGCCGATAGTGC 57.850 50.000 0.00 0.00 0.00 4.40
2464 3788 0.317479 ATTAGGACGCCGATAGTGCC 59.683 55.000 0.00 0.00 0.00 5.01
2465 3789 1.038681 TTAGGACGCCGATAGTGCCA 61.039 55.000 0.00 0.00 0.00 4.92
2468 3792 2.125673 ACGCCGATAGTGCCACAC 60.126 61.111 0.00 0.00 34.10 3.82
2482 3806 1.300311 CACACGTGTGGGCGTTAGA 60.300 57.895 35.65 0.00 43.83 2.10
2487 3811 1.373812 GTGTGGGCGTTAGAGGGTT 59.626 57.895 0.00 0.00 0.00 4.11
2525 4224 7.247456 TGTGTGGTGTATATAAGAGGAACAA 57.753 36.000 0.00 0.00 0.00 2.83
2567 4283 4.744631 GGCAAAACAAGTAATGACCACAAG 59.255 41.667 0.00 0.00 0.00 3.16
2602 4319 3.834799 CCCGTACGTCAGGCCTCC 61.835 72.222 15.21 0.00 0.00 4.30
2636 4353 3.387091 ATGCCCCGCGTGACAGTA 61.387 61.111 4.92 0.00 0.00 2.74
2649 4830 4.060038 CAGTAACCCGCGTCCCGT 62.060 66.667 4.92 0.00 34.38 5.28
2682 4863 0.898320 CAGACCCTCGTCCATGTTCT 59.102 55.000 0.00 0.00 40.12 3.01
2697 4935 8.073768 CGTCCATGTTCTTTTAATTGTAGTTGT 58.926 33.333 0.00 0.00 0.00 3.32
2737 4975 1.070914 TGCCATGTCGGACAACTACAA 59.929 47.619 15.72 0.00 36.56 2.41
2965 5214 1.372582 CCATCTGCTTACGTGCATGT 58.627 50.000 17.19 17.19 42.48 3.21
2973 5222 2.080693 CTTACGTGCATGTTAGGGCAA 58.919 47.619 18.34 3.12 42.45 4.52
3011 5260 1.178534 AAACACATGGCAACTCGGGG 61.179 55.000 0.00 0.00 37.61 5.73
3017 5267 1.889829 CATGGCAACTCGGGGTAAAAA 59.110 47.619 0.00 0.00 37.61 1.94
3110 5361 1.528309 CTTTGGGTGTGGGCGAAGT 60.528 57.895 0.00 0.00 0.00 3.01
3126 5456 1.127951 GAAGTGATAAACGCCCACACG 59.872 52.381 0.00 0.00 36.71 4.49
3183 5514 0.959867 CGGATGAATGCCCACACACA 60.960 55.000 0.00 0.00 0.00 3.72
3184 5515 0.527565 GGATGAATGCCCACACACAC 59.472 55.000 0.00 0.00 0.00 3.82
3185 5516 0.527565 GATGAATGCCCACACACACC 59.472 55.000 0.00 0.00 0.00 4.16
3186 5517 0.178967 ATGAATGCCCACACACACCA 60.179 50.000 0.00 0.00 0.00 4.17
3187 5518 0.178967 TGAATGCCCACACACACCAT 60.179 50.000 0.00 0.00 0.00 3.55
3223 5554 3.181491 GGCACACAAAAACTGCTAGAACA 60.181 43.478 0.00 0.00 0.00 3.18
3292 5623 2.672996 GTTGCCAGACGCCCACAT 60.673 61.111 0.00 0.00 36.24 3.21
3311 5642 1.301423 TGTGTGGGCGTTAGTGTTTC 58.699 50.000 0.00 0.00 0.00 2.78
3312 5643 1.134340 TGTGTGGGCGTTAGTGTTTCT 60.134 47.619 0.00 0.00 0.00 2.52
3319 5650 4.339814 TGGGCGTTAGTGTTTCTGAATTTT 59.660 37.500 0.00 0.00 0.00 1.82
3320 5651 5.163499 TGGGCGTTAGTGTTTCTGAATTTTT 60.163 36.000 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.815213 TAGTATAGCCGACGGTGCGT 60.815 55.000 16.73 2.19 45.10 5.24
6 7 0.308684 TTAGTATAGCCGACGGTGCG 59.691 55.000 16.73 0.00 0.00 5.34
7 8 2.325761 CATTAGTATAGCCGACGGTGC 58.674 52.381 16.73 1.30 0.00 5.01
10 11 1.731424 CGCCATTAGTATAGCCGACGG 60.731 57.143 10.29 10.29 0.00 4.79
15 16 2.338500 GAGTGCGCCATTAGTATAGCC 58.662 52.381 4.18 0.00 0.00 3.93
16 17 2.338500 GGAGTGCGCCATTAGTATAGC 58.662 52.381 4.18 0.00 0.00 2.97
17 18 2.299013 TGGGAGTGCGCCATTAGTATAG 59.701 50.000 4.18 0.00 0.00 1.31
19 20 1.128200 TGGGAGTGCGCCATTAGTAT 58.872 50.000 4.18 0.00 0.00 2.12
20 21 0.177141 GTGGGAGTGCGCCATTAGTA 59.823 55.000 4.18 0.00 0.00 1.82
21 22 1.078426 GTGGGAGTGCGCCATTAGT 60.078 57.895 4.18 0.00 0.00 2.24
22 23 2.173669 CGTGGGAGTGCGCCATTAG 61.174 63.158 4.18 0.00 0.00 1.73
23 24 2.125310 CGTGGGAGTGCGCCATTA 60.125 61.111 4.18 0.00 0.00 1.90
31 32 2.469465 AATGGAGCACCGTGGGAGTG 62.469 60.000 0.00 0.00 39.42 3.51
32 33 0.907704 TAATGGAGCACCGTGGGAGT 60.908 55.000 0.00 0.00 39.42 3.85
33 34 0.179073 CTAATGGAGCACCGTGGGAG 60.179 60.000 0.00 0.00 39.42 4.30
34 35 0.907704 ACTAATGGAGCACCGTGGGA 60.908 55.000 0.00 0.00 39.42 4.37
35 36 0.828022 TACTAATGGAGCACCGTGGG 59.172 55.000 0.00 0.00 39.42 4.61
36 37 2.910688 ATACTAATGGAGCACCGTGG 57.089 50.000 0.00 0.00 39.42 4.94
37 38 3.069016 TGGTATACTAATGGAGCACCGTG 59.931 47.826 2.25 0.00 39.42 4.94
38 39 3.302161 TGGTATACTAATGGAGCACCGT 58.698 45.455 2.25 0.00 39.42 4.83
39 40 3.572682 TCTGGTATACTAATGGAGCACCG 59.427 47.826 2.25 0.00 39.42 4.94
40 41 5.746990 ATCTGGTATACTAATGGAGCACC 57.253 43.478 2.25 0.00 0.00 5.01
41 42 7.469537 AGTATCTGGTATACTAATGGAGCAC 57.530 40.000 2.25 0.00 33.45 4.40
54 55 9.032624 ACGCCATTAGTAATTAGTATCTGGTAT 57.967 33.333 20.25 12.12 0.00 2.73
55 56 8.301720 CACGCCATTAGTAATTAGTATCTGGTA 58.698 37.037 20.25 2.21 0.00 3.25
56 57 7.152645 CACGCCATTAGTAATTAGTATCTGGT 58.847 38.462 20.25 8.05 0.00 4.00
57 58 6.090898 GCACGCCATTAGTAATTAGTATCTGG 59.909 42.308 17.48 17.48 0.00 3.86
58 59 6.868864 AGCACGCCATTAGTAATTAGTATCTG 59.131 38.462 0.83 3.05 0.00 2.90
59 60 6.994221 AGCACGCCATTAGTAATTAGTATCT 58.006 36.000 0.83 0.00 0.00 1.98
60 61 8.027771 ACTAGCACGCCATTAGTAATTAGTATC 58.972 37.037 0.83 0.00 0.00 2.24
61 62 7.893658 ACTAGCACGCCATTAGTAATTAGTAT 58.106 34.615 0.83 0.00 0.00 2.12
62 63 7.281040 ACTAGCACGCCATTAGTAATTAGTA 57.719 36.000 0.00 0.00 0.00 1.82
63 64 6.158023 ACTAGCACGCCATTAGTAATTAGT 57.842 37.500 0.00 0.00 0.00 2.24
64 65 7.326305 CACTACTAGCACGCCATTAGTAATTAG 59.674 40.741 0.00 0.00 31.54 1.73
65 66 7.143340 CACTACTAGCACGCCATTAGTAATTA 58.857 38.462 0.00 0.00 31.54 1.40
66 67 5.983720 CACTACTAGCACGCCATTAGTAATT 59.016 40.000 0.00 0.00 31.54 1.40
67 68 5.509163 CCACTACTAGCACGCCATTAGTAAT 60.509 44.000 0.00 0.00 31.54 1.89
68 69 4.202080 CCACTACTAGCACGCCATTAGTAA 60.202 45.833 0.00 0.00 31.54 2.24
69 70 3.317149 CCACTACTAGCACGCCATTAGTA 59.683 47.826 0.00 0.00 0.00 1.82
70 71 2.100916 CCACTACTAGCACGCCATTAGT 59.899 50.000 0.00 0.00 0.00 2.24
71 72 2.743938 CCACTACTAGCACGCCATTAG 58.256 52.381 0.00 0.00 0.00 1.73
72 73 1.202486 GCCACTACTAGCACGCCATTA 60.202 52.381 0.00 0.00 0.00 1.90
73 74 0.462047 GCCACTACTAGCACGCCATT 60.462 55.000 0.00 0.00 0.00 3.16
74 75 1.144057 GCCACTACTAGCACGCCAT 59.856 57.895 0.00 0.00 0.00 4.40
75 76 2.577059 GCCACTACTAGCACGCCA 59.423 61.111 0.00 0.00 0.00 5.69
76 77 2.582498 CGCCACTACTAGCACGCC 60.582 66.667 0.00 0.00 0.00 5.68
77 78 3.255379 GCGCCACTACTAGCACGC 61.255 66.667 0.00 0.00 39.49 5.34
78 79 2.180769 TGCGCCACTACTAGCACG 59.819 61.111 4.18 0.00 34.39 5.34
80 81 1.982395 AGGTGCGCCACTACTAGCA 60.982 57.895 20.59 0.00 37.19 3.49
81 82 1.519455 CAGGTGCGCCACTACTAGC 60.519 63.158 20.59 0.00 37.19 3.42
82 83 1.065701 CTACAGGTGCGCCACTACTAG 59.934 57.143 20.59 5.32 37.19 2.57
83 84 1.100510 CTACAGGTGCGCCACTACTA 58.899 55.000 20.59 0.00 37.19 1.82
84 85 1.890894 CTACAGGTGCGCCACTACT 59.109 57.895 20.59 0.00 37.19 2.57
85 86 1.810030 GCTACAGGTGCGCCACTAC 60.810 63.158 20.59 0.00 37.19 2.73
86 87 2.577059 GCTACAGGTGCGCCACTA 59.423 61.111 20.59 5.92 37.19 2.74
87 88 4.742201 CGCTACAGGTGCGCCACT 62.742 66.667 20.59 4.91 46.72 4.00
94 95 1.290203 CTAATGGTGCGCTACAGGTG 58.710 55.000 9.73 0.00 0.00 4.00
95 96 0.902531 ACTAATGGTGCGCTACAGGT 59.097 50.000 9.73 5.67 0.00 4.00
96 97 2.545952 CCTACTAATGGTGCGCTACAGG 60.546 54.545 9.73 2.74 0.00 4.00
97 98 2.743938 CCTACTAATGGTGCGCTACAG 58.256 52.381 9.73 1.55 0.00 2.74
98 99 1.202486 GCCTACTAATGGTGCGCTACA 60.202 52.381 9.73 8.16 0.00 2.74
99 100 1.202486 TGCCTACTAATGGTGCGCTAC 60.202 52.381 9.73 5.08 0.00 3.58
100 101 1.116308 TGCCTACTAATGGTGCGCTA 58.884 50.000 9.73 0.00 0.00 4.26
101 102 0.251916 TTGCCTACTAATGGTGCGCT 59.748 50.000 9.73 0.00 0.00 5.92
102 103 1.091537 TTTGCCTACTAATGGTGCGC 58.908 50.000 0.00 0.00 0.00 6.09
103 104 2.486203 TGTTTTGCCTACTAATGGTGCG 59.514 45.455 0.00 0.00 0.00 5.34
104 105 3.119495 CCTGTTTTGCCTACTAATGGTGC 60.119 47.826 0.00 0.00 0.00 5.01
105 106 4.079253 ACCTGTTTTGCCTACTAATGGTG 58.921 43.478 0.00 0.00 0.00 4.17
106 107 4.079253 CACCTGTTTTGCCTACTAATGGT 58.921 43.478 0.00 0.00 0.00 3.55
107 108 3.119495 GCACCTGTTTTGCCTACTAATGG 60.119 47.826 0.00 0.00 33.58 3.16
108 109 3.426159 CGCACCTGTTTTGCCTACTAATG 60.426 47.826 0.00 0.00 36.57 1.90
109 110 2.747446 CGCACCTGTTTTGCCTACTAAT 59.253 45.455 0.00 0.00 36.57 1.73
110 111 2.147958 CGCACCTGTTTTGCCTACTAA 58.852 47.619 0.00 0.00 36.57 2.24
111 112 1.803334 CGCACCTGTTTTGCCTACTA 58.197 50.000 0.00 0.00 36.57 1.82
112 113 1.515521 GCGCACCTGTTTTGCCTACT 61.516 55.000 0.30 0.00 36.57 2.57
113 114 1.081442 GCGCACCTGTTTTGCCTAC 60.081 57.895 0.30 0.00 36.57 3.18
114 115 2.265182 GGCGCACCTGTTTTGCCTA 61.265 57.895 10.83 0.00 42.44 3.93
115 116 3.605664 GGCGCACCTGTTTTGCCT 61.606 61.111 10.83 0.00 42.44 4.75
116 117 3.910490 TGGCGCACCTGTTTTGCC 61.910 61.111 10.83 0.00 45.91 4.52
117 118 1.791103 TAGTGGCGCACCTGTTTTGC 61.791 55.000 10.83 0.00 34.49 3.68
118 119 0.238289 CTAGTGGCGCACCTGTTTTG 59.762 55.000 10.83 0.00 34.49 2.44
119 120 0.179029 ACTAGTGGCGCACCTGTTTT 60.179 50.000 10.83 0.00 34.49 2.43
120 121 0.682852 TACTAGTGGCGCACCTGTTT 59.317 50.000 10.83 0.00 34.49 2.83
121 122 0.246635 CTACTAGTGGCGCACCTGTT 59.753 55.000 10.83 0.00 34.49 3.16
122 123 1.605058 CCTACTAGTGGCGCACCTGT 61.605 60.000 10.83 9.67 34.49 4.00
123 124 1.141881 CCTACTAGTGGCGCACCTG 59.858 63.158 10.83 4.23 34.49 4.00
124 125 2.722201 GCCTACTAGTGGCGCACCT 61.722 63.158 10.83 6.50 41.03 4.00
125 126 2.202892 GCCTACTAGTGGCGCACC 60.203 66.667 10.83 0.00 41.03 5.01
131 132 4.031611 ACTAGGAAAAGGCCTACTAGTGG 58.968 47.826 25.95 1.52 41.83 4.00
132 133 5.892686 ACTACTAGGAAAAGGCCTACTAGTG 59.107 44.000 30.23 24.61 42.90 2.74
133 134 5.892686 CACTACTAGGAAAAGGCCTACTAGT 59.107 44.000 27.82 27.82 44.53 2.57
134 135 5.892686 ACACTACTAGGAAAAGGCCTACTAG 59.107 44.000 22.30 22.30 39.50 2.57
135 136 5.835582 ACACTACTAGGAAAAGGCCTACTA 58.164 41.667 5.16 5.95 39.50 1.82
136 137 4.685807 ACACTACTAGGAAAAGGCCTACT 58.314 43.478 5.16 4.94 39.50 2.57
137 138 4.710865 AGACACTACTAGGAAAAGGCCTAC 59.289 45.833 5.16 0.00 39.50 3.18
138 139 4.710375 CAGACACTACTAGGAAAAGGCCTA 59.290 45.833 5.16 0.00 39.50 3.93
139 140 3.515901 CAGACACTACTAGGAAAAGGCCT 59.484 47.826 0.00 0.00 42.15 5.19
140 141 3.514309 TCAGACACTACTAGGAAAAGGCC 59.486 47.826 0.00 0.00 0.00 5.19
141 142 4.463186 TCTCAGACACTACTAGGAAAAGGC 59.537 45.833 0.00 0.00 0.00 4.35
142 143 5.105675 GGTCTCAGACACTACTAGGAAAAGG 60.106 48.000 7.24 0.00 33.68 3.11
143 144 5.477291 TGGTCTCAGACACTACTAGGAAAAG 59.523 44.000 7.24 0.00 33.68 2.27
144 145 5.391256 TGGTCTCAGACACTACTAGGAAAA 58.609 41.667 7.24 0.00 33.68 2.29
145 146 4.994282 TGGTCTCAGACACTACTAGGAAA 58.006 43.478 7.24 0.00 33.68 3.13
146 147 4.652679 TGGTCTCAGACACTACTAGGAA 57.347 45.455 7.24 0.00 33.68 3.36
147 148 4.527944 CATGGTCTCAGACACTACTAGGA 58.472 47.826 7.24 0.00 33.68 2.94
148 149 3.067461 GCATGGTCTCAGACACTACTAGG 59.933 52.174 7.24 0.00 33.68 3.02
149 150 3.696548 TGCATGGTCTCAGACACTACTAG 59.303 47.826 7.24 0.00 33.68 2.57
150 151 3.697166 TGCATGGTCTCAGACACTACTA 58.303 45.455 7.24 0.00 33.68 1.82
151 152 2.529632 TGCATGGTCTCAGACACTACT 58.470 47.619 7.24 0.00 33.68 2.57
152 153 3.533606 ATGCATGGTCTCAGACACTAC 57.466 47.619 7.24 0.00 33.68 2.73
153 154 4.558226 AAATGCATGGTCTCAGACACTA 57.442 40.909 7.24 0.00 33.68 2.74
154 155 3.430042 AAATGCATGGTCTCAGACACT 57.570 42.857 7.24 0.00 33.68 3.55
155 156 4.217118 AGAAAAATGCATGGTCTCAGACAC 59.783 41.667 7.24 0.00 33.68 3.67
156 157 4.401022 AGAAAAATGCATGGTCTCAGACA 58.599 39.130 7.24 0.00 33.68 3.41
157 158 5.382618 AAGAAAAATGCATGGTCTCAGAC 57.617 39.130 0.00 0.00 0.00 3.51
158 159 6.409524 AAAAGAAAAATGCATGGTCTCAGA 57.590 33.333 0.00 0.00 0.00 3.27
159 160 6.129009 CGAAAAAGAAAAATGCATGGTCTCAG 60.129 38.462 0.00 0.00 0.00 3.35
160 161 5.691305 CGAAAAAGAAAAATGCATGGTCTCA 59.309 36.000 0.00 0.00 0.00 3.27
161 162 5.691754 ACGAAAAAGAAAAATGCATGGTCTC 59.308 36.000 0.00 0.00 0.00 3.36
162 163 5.600696 ACGAAAAAGAAAAATGCATGGTCT 58.399 33.333 0.00 0.07 0.00 3.85
163 164 5.905480 ACGAAAAAGAAAAATGCATGGTC 57.095 34.783 0.00 0.00 0.00 4.02
164 165 6.512297 AGTACGAAAAAGAAAAATGCATGGT 58.488 32.000 0.00 0.00 0.00 3.55
165 166 8.020819 TCTAGTACGAAAAAGAAAAATGCATGG 58.979 33.333 0.00 0.00 0.00 3.66
166 167 8.948853 TCTAGTACGAAAAAGAAAAATGCATG 57.051 30.769 0.00 0.00 0.00 4.06
167 168 9.394477 GTTCTAGTACGAAAAAGAAAAATGCAT 57.606 29.630 0.00 0.00 30.24 3.96
168 169 8.399425 TGTTCTAGTACGAAAAAGAAAAATGCA 58.601 29.630 0.00 0.00 30.24 3.96
169 170 8.776680 TGTTCTAGTACGAAAAAGAAAAATGC 57.223 30.769 0.00 0.00 30.24 3.56
175 176 9.121517 CGAGTATTGTTCTAGTACGAAAAAGAA 57.878 33.333 0.00 0.00 0.00 2.52
176 177 8.292448 ACGAGTATTGTTCTAGTACGAAAAAGA 58.708 33.333 0.00 0.00 0.00 2.52
177 178 8.363755 CACGAGTATTGTTCTAGTACGAAAAAG 58.636 37.037 0.00 0.00 0.00 2.27
178 179 7.148918 GCACGAGTATTGTTCTAGTACGAAAAA 60.149 37.037 0.00 0.00 0.00 1.94
179 180 6.306356 GCACGAGTATTGTTCTAGTACGAAAA 59.694 38.462 0.00 0.00 0.00 2.29
180 181 5.796935 GCACGAGTATTGTTCTAGTACGAAA 59.203 40.000 0.00 0.00 0.00 3.46
181 182 5.122869 AGCACGAGTATTGTTCTAGTACGAA 59.877 40.000 0.00 0.00 0.00 3.85
182 183 4.633126 AGCACGAGTATTGTTCTAGTACGA 59.367 41.667 0.00 0.00 0.00 3.43
183 184 4.906423 AGCACGAGTATTGTTCTAGTACG 58.094 43.478 0.00 0.00 0.00 3.67
184 185 6.453922 GCAAAGCACGAGTATTGTTCTAGTAC 60.454 42.308 0.00 0.00 0.00 2.73
185 186 5.575606 GCAAAGCACGAGTATTGTTCTAGTA 59.424 40.000 0.00 0.00 0.00 1.82
186 187 4.389077 GCAAAGCACGAGTATTGTTCTAGT 59.611 41.667 0.00 0.00 0.00 2.57
187 188 4.388773 TGCAAAGCACGAGTATTGTTCTAG 59.611 41.667 0.00 0.00 31.71 2.43
188 189 4.311606 TGCAAAGCACGAGTATTGTTCTA 58.688 39.130 0.00 0.00 31.71 2.10
189 190 3.138304 TGCAAAGCACGAGTATTGTTCT 58.862 40.909 0.00 0.00 31.71 3.01
190 191 3.536158 TGCAAAGCACGAGTATTGTTC 57.464 42.857 0.00 0.00 31.71 3.18
191 192 3.980646 TTGCAAAGCACGAGTATTGTT 57.019 38.095 0.00 0.00 38.71 2.83
192 193 3.366273 CCATTGCAAAGCACGAGTATTGT 60.366 43.478 1.71 0.00 38.71 2.71
193 194 3.173599 CCATTGCAAAGCACGAGTATTG 58.826 45.455 1.71 0.00 38.71 1.90
194 195 2.164219 CCCATTGCAAAGCACGAGTATT 59.836 45.455 1.71 0.00 38.71 1.89
195 196 1.745087 CCCATTGCAAAGCACGAGTAT 59.255 47.619 1.71 0.00 38.71 2.12
196 197 1.164411 CCCATTGCAAAGCACGAGTA 58.836 50.000 1.71 0.00 38.71 2.59
197 198 0.537143 TCCCATTGCAAAGCACGAGT 60.537 50.000 1.71 0.00 38.71 4.18
198 199 0.813184 ATCCCATTGCAAAGCACGAG 59.187 50.000 1.71 0.00 38.71 4.18
199 200 2.121291 TATCCCATTGCAAAGCACGA 57.879 45.000 1.71 0.00 38.71 4.35
200 201 4.566545 TTATATCCCATTGCAAAGCACG 57.433 40.909 1.71 0.00 38.71 5.34
201 202 6.752168 AGATTTATATCCCATTGCAAAGCAC 58.248 36.000 1.71 0.00 38.71 4.40
202 203 6.982160 AGATTTATATCCCATTGCAAAGCA 57.018 33.333 1.71 0.00 36.47 3.91
203 204 7.664758 AGAAGATTTATATCCCATTGCAAAGC 58.335 34.615 1.71 0.00 0.00 3.51
212 213 9.017509 ACGACGTATTAGAAGATTTATATCCCA 57.982 33.333 0.00 0.00 0.00 4.37
213 214 9.852091 AACGACGTATTAGAAGATTTATATCCC 57.148 33.333 0.00 0.00 0.00 3.85
219 220 9.409312 TCACAAAACGACGTATTAGAAGATTTA 57.591 29.630 0.00 0.00 0.00 1.40
220 221 8.301730 TCACAAAACGACGTATTAGAAGATTT 57.698 30.769 0.00 0.00 0.00 2.17
221 222 7.878477 TCACAAAACGACGTATTAGAAGATT 57.122 32.000 0.00 0.00 0.00 2.40
222 223 8.475331 AATCACAAAACGACGTATTAGAAGAT 57.525 30.769 0.00 0.00 0.00 2.40
223 224 7.878477 AATCACAAAACGACGTATTAGAAGA 57.122 32.000 0.00 0.00 0.00 2.87
224 225 9.456797 GTAAATCACAAAACGACGTATTAGAAG 57.543 33.333 0.00 0.00 0.00 2.85
225 226 9.195411 AGTAAATCACAAAACGACGTATTAGAA 57.805 29.630 0.00 0.00 0.00 2.10
226 227 8.746922 AGTAAATCACAAAACGACGTATTAGA 57.253 30.769 0.00 0.00 0.00 2.10
227 228 9.246423 CAAGTAAATCACAAAACGACGTATTAG 57.754 33.333 0.00 0.00 0.00 1.73
228 229 8.763356 ACAAGTAAATCACAAAACGACGTATTA 58.237 29.630 0.00 0.00 0.00 0.98
229 230 7.632721 ACAAGTAAATCACAAAACGACGTATT 58.367 30.769 0.00 0.00 0.00 1.89
230 231 7.170320 AGACAAGTAAATCACAAAACGACGTAT 59.830 33.333 0.00 0.00 0.00 3.06
231 232 6.476380 AGACAAGTAAATCACAAAACGACGTA 59.524 34.615 0.00 0.00 0.00 3.57
232 233 5.292589 AGACAAGTAAATCACAAAACGACGT 59.707 36.000 0.00 0.00 0.00 4.34
233 234 5.734311 AGACAAGTAAATCACAAAACGACG 58.266 37.500 0.00 0.00 0.00 5.12
248 249 9.758651 ACACAATCGCATTATTATAGACAAGTA 57.241 29.630 0.00 0.00 0.00 2.24
249 250 8.662781 ACACAATCGCATTATTATAGACAAGT 57.337 30.769 0.00 0.00 0.00 3.16
260 261 9.677567 GACCATTTATTTACACAATCGCATTAT 57.322 29.630 0.00 0.00 0.00 1.28
261 262 8.678199 TGACCATTTATTTACACAATCGCATTA 58.322 29.630 0.00 0.00 0.00 1.90
262 263 7.542890 TGACCATTTATTTACACAATCGCATT 58.457 30.769 0.00 0.00 0.00 3.56
263 264 7.094508 TGACCATTTATTTACACAATCGCAT 57.905 32.000 0.00 0.00 0.00 4.73
264 265 6.502136 TGACCATTTATTTACACAATCGCA 57.498 33.333 0.00 0.00 0.00 5.10
265 266 7.192913 TGATGACCATTTATTTACACAATCGC 58.807 34.615 0.00 0.00 0.00 4.58
266 267 9.566530 TTTGATGACCATTTATTTACACAATCG 57.433 29.630 0.00 0.00 0.00 3.34
275 276 9.504708 TGAGCAAAATTTGATGACCATTTATTT 57.495 25.926 10.26 0.00 0.00 1.40
276 277 9.675464 ATGAGCAAAATTTGATGACCATTTATT 57.325 25.926 10.26 0.00 0.00 1.40
308 309 9.470399 ACCAAACTTCGGATAAAAATATAAGGT 57.530 29.630 0.00 0.00 0.00 3.50
344 345 9.197306 ACTTACCTTCTTAACCAGTTTCATTTT 57.803 29.630 0.00 0.00 0.00 1.82
345 346 8.762481 ACTTACCTTCTTAACCAGTTTCATTT 57.238 30.769 0.00 0.00 0.00 2.32
346 347 9.856162 TTACTTACCTTCTTAACCAGTTTCATT 57.144 29.630 0.00 0.00 0.00 2.57
347 348 9.856162 TTTACTTACCTTCTTAACCAGTTTCAT 57.144 29.630 0.00 0.00 0.00 2.57
348 349 9.856162 ATTTACTTACCTTCTTAACCAGTTTCA 57.144 29.630 0.00 0.00 0.00 2.69
383 384 9.403583 GTCCAACCTTCCTTGTATGATAATAAA 57.596 33.333 0.00 0.00 0.00 1.40
384 385 7.713507 CGTCCAACCTTCCTTGTATGATAATAA 59.286 37.037 0.00 0.00 0.00 1.40
385 386 7.070198 TCGTCCAACCTTCCTTGTATGATAATA 59.930 37.037 0.00 0.00 0.00 0.98
386 387 6.055588 CGTCCAACCTTCCTTGTATGATAAT 58.944 40.000 0.00 0.00 0.00 1.28
387 388 5.188163 TCGTCCAACCTTCCTTGTATGATAA 59.812 40.000 0.00 0.00 0.00 1.75
388 389 4.712829 TCGTCCAACCTTCCTTGTATGATA 59.287 41.667 0.00 0.00 0.00 2.15
389 390 3.517901 TCGTCCAACCTTCCTTGTATGAT 59.482 43.478 0.00 0.00 0.00 2.45
390 391 2.901192 TCGTCCAACCTTCCTTGTATGA 59.099 45.455 0.00 0.00 0.00 2.15
391 392 3.328382 TCGTCCAACCTTCCTTGTATG 57.672 47.619 0.00 0.00 0.00 2.39
392 393 3.307480 CCTTCGTCCAACCTTCCTTGTAT 60.307 47.826 0.00 0.00 0.00 2.29
393 394 2.038033 CCTTCGTCCAACCTTCCTTGTA 59.962 50.000 0.00 0.00 0.00 2.41
394 395 1.202770 CCTTCGTCCAACCTTCCTTGT 60.203 52.381 0.00 0.00 0.00 3.16
395 396 1.523758 CCTTCGTCCAACCTTCCTTG 58.476 55.000 0.00 0.00 0.00 3.61
396 397 0.400594 CCCTTCGTCCAACCTTCCTT 59.599 55.000 0.00 0.00 0.00 3.36
397 398 1.489560 CCCCTTCGTCCAACCTTCCT 61.490 60.000 0.00 0.00 0.00 3.36
398 399 1.002502 CCCCTTCGTCCAACCTTCC 60.003 63.158 0.00 0.00 0.00 3.46
399 400 0.605589 CACCCCTTCGTCCAACCTTC 60.606 60.000 0.00 0.00 0.00 3.46
400 401 1.454539 CACCCCTTCGTCCAACCTT 59.545 57.895 0.00 0.00 0.00 3.50
401 402 2.526046 CCACCCCTTCGTCCAACCT 61.526 63.158 0.00 0.00 0.00 3.50
402 403 2.033602 CCACCCCTTCGTCCAACC 59.966 66.667 0.00 0.00 0.00 3.77
403 404 1.599797 CACCACCCCTTCGTCCAAC 60.600 63.158 0.00 0.00 0.00 3.77
404 405 2.824880 CCACCACCCCTTCGTCCAA 61.825 63.158 0.00 0.00 0.00 3.53
405 406 3.246112 CCACCACCCCTTCGTCCA 61.246 66.667 0.00 0.00 0.00 4.02
406 407 4.029809 CCCACCACCCCTTCGTCC 62.030 72.222 0.00 0.00 0.00 4.79
407 408 2.465055 CTTCCCACCACCCCTTCGTC 62.465 65.000 0.00 0.00 0.00 4.20
408 409 2.448931 TTCCCACCACCCCTTCGT 60.449 61.111 0.00 0.00 0.00 3.85
409 410 1.774894 TTCTTCCCACCACCCCTTCG 61.775 60.000 0.00 0.00 0.00 3.79
410 411 0.481128 TTTCTTCCCACCACCCCTTC 59.519 55.000 0.00 0.00 0.00 3.46
411 412 0.482887 CTTTCTTCCCACCACCCCTT 59.517 55.000 0.00 0.00 0.00 3.95
412 413 1.435346 CCTTTCTTCCCACCACCCCT 61.435 60.000 0.00 0.00 0.00 4.79
413 414 1.076727 CCTTTCTTCCCACCACCCC 59.923 63.158 0.00 0.00 0.00 4.95
414 415 0.539669 CACCTTTCTTCCCACCACCC 60.540 60.000 0.00 0.00 0.00 4.61
415 416 0.476771 TCACCTTTCTTCCCACCACC 59.523 55.000 0.00 0.00 0.00 4.61
416 417 2.358322 TTCACCTTTCTTCCCACCAC 57.642 50.000 0.00 0.00 0.00 4.16
417 418 3.117322 TCATTTCACCTTTCTTCCCACCA 60.117 43.478 0.00 0.00 0.00 4.17
418 419 3.496331 TCATTTCACCTTTCTTCCCACC 58.504 45.455 0.00 0.00 0.00 4.61
419 420 4.398319 TCTCATTTCACCTTTCTTCCCAC 58.602 43.478 0.00 0.00 0.00 4.61
420 421 4.722526 TCTCATTTCACCTTTCTTCCCA 57.277 40.909 0.00 0.00 0.00 4.37
421 422 4.218635 GGTTCTCATTTCACCTTTCTTCCC 59.781 45.833 0.00 0.00 0.00 3.97
422 423 5.073428 AGGTTCTCATTTCACCTTTCTTCC 58.927 41.667 0.00 0.00 37.70 3.46
423 424 6.641169 AAGGTTCTCATTTCACCTTTCTTC 57.359 37.500 0.00 0.00 46.85 2.87
424 425 6.204882 CGTAAGGTTCTCATTTCACCTTTCTT 59.795 38.462 8.08 0.00 46.85 2.52
425 426 5.701290 CGTAAGGTTCTCATTTCACCTTTCT 59.299 40.000 8.08 0.00 46.85 2.52
426 427 5.469084 ACGTAAGGTTCTCATTTCACCTTTC 59.531 40.000 8.08 2.95 46.85 2.62
427 428 5.374071 ACGTAAGGTTCTCATTTCACCTTT 58.626 37.500 8.08 0.00 46.85 3.11
429 430 4.618920 ACGTAAGGTTCTCATTTCACCT 57.381 40.909 0.00 0.00 43.17 4.00
440 441 4.817517 TCAGGATGAAGAACGTAAGGTTC 58.182 43.478 2.71 2.71 45.97 3.62
441 442 4.884668 TCAGGATGAAGAACGTAAGGTT 57.115 40.909 0.00 0.00 45.97 3.50
534 536 9.271828 GGAGGCTGAATTTTTGAAAAAGATAAA 57.728 29.630 9.13 0.00 0.00 1.40
535 537 8.428063 TGGAGGCTGAATTTTTGAAAAAGATAA 58.572 29.630 9.13 0.00 0.00 1.75
536 538 7.961351 TGGAGGCTGAATTTTTGAAAAAGATA 58.039 30.769 9.13 0.00 0.00 1.98
537 539 6.829849 TGGAGGCTGAATTTTTGAAAAAGAT 58.170 32.000 9.13 0.63 0.00 2.40
538 540 6.232581 TGGAGGCTGAATTTTTGAAAAAGA 57.767 33.333 9.13 0.00 0.00 2.52
539 541 6.128742 CGATGGAGGCTGAATTTTTGAAAAAG 60.129 38.462 9.13 0.00 0.00 2.27
558 560 1.699730 TTTATCTCGGCCTCGATGGA 58.300 50.000 12.42 0.00 45.04 3.41
559 561 2.526304 TTTTATCTCGGCCTCGATGG 57.474 50.000 12.42 0.00 45.04 3.51
576 578 2.500509 TTTTCGAGCATGGCGTTTTT 57.499 40.000 0.00 0.00 0.00 1.94
585 587 0.392998 AGGCCACGATTTTCGAGCAT 60.393 50.000 5.01 7.99 43.74 3.79
586 588 0.248012 TAGGCCACGATTTTCGAGCA 59.752 50.000 5.01 0.00 43.74 4.26
587 589 0.931005 CTAGGCCACGATTTTCGAGC 59.069 55.000 5.01 6.10 43.74 5.03
588 590 2.579207 TCTAGGCCACGATTTTCGAG 57.421 50.000 5.01 0.00 43.74 4.04
589 591 3.259064 CTTTCTAGGCCACGATTTTCGA 58.741 45.455 5.01 0.00 43.74 3.71
657 659 1.078823 TCCCTATCACACACTCCACCT 59.921 52.381 0.00 0.00 0.00 4.00
726 728 3.129871 CAAGCTGAATTTGCCGGAAAAA 58.870 40.909 12.78 8.52 0.00 1.94
763 802 1.442857 GGCTCACTCGTCACAGTCG 60.443 63.158 0.00 0.00 0.00 4.18
768 807 1.226435 CGCTAGGCTCACTCGTCAC 60.226 63.158 0.00 0.00 0.00 3.67
812 856 7.615403 ACGTCATTGCTGATTATATGTAGGAT 58.385 34.615 0.00 0.00 32.98 3.24
813 857 6.993079 ACGTCATTGCTGATTATATGTAGGA 58.007 36.000 0.00 0.00 32.98 2.94
1086 1156 1.770324 CAGGCTCCTCACCCCTTTT 59.230 57.895 0.00 0.00 0.00 2.27
1102 1172 2.262915 GGACGACTCCAGCACCAG 59.737 66.667 0.00 0.00 36.42 4.00
1201 1271 1.494960 AGGTGGAGCTTCCTGATCTC 58.505 55.000 5.46 0.00 37.46 2.75
1269 1339 3.767711 GTCCCTGAAATCCACCTTCTTT 58.232 45.455 0.00 0.00 0.00 2.52
1273 1343 1.279271 CTCGTCCCTGAAATCCACCTT 59.721 52.381 0.00 0.00 0.00 3.50
1281 1351 1.005394 GCGGAACTCGTCCCTGAAA 60.005 57.895 0.00 0.00 44.60 2.69
1400 1919 4.814294 GGATCTTGGCGCCGTCGT 62.814 66.667 23.90 8.07 38.14 4.34
1732 2272 1.695242 ACGGTAAATGGACACTGGACA 59.305 47.619 0.00 0.00 0.00 4.02
1733 2273 2.028385 AGACGGTAAATGGACACTGGAC 60.028 50.000 0.00 0.00 0.00 4.02
1734 2274 2.232941 GAGACGGTAAATGGACACTGGA 59.767 50.000 0.00 0.00 0.00 3.86
1735 2275 2.618053 GAGACGGTAAATGGACACTGG 58.382 52.381 0.00 0.00 0.00 4.00
1736 2276 2.259618 CGAGACGGTAAATGGACACTG 58.740 52.381 0.00 0.00 0.00 3.66
1737 2277 1.403780 GCGAGACGGTAAATGGACACT 60.404 52.381 0.00 0.00 0.00 3.55
1738 2278 0.997196 GCGAGACGGTAAATGGACAC 59.003 55.000 0.00 0.00 0.00 3.67
1826 2369 1.835927 GCACCTTGGAGCTCCTCAGT 61.836 60.000 32.28 22.38 36.82 3.41
2105 2663 3.253188 CGATCCTCTCCTTCTCATCAGTC 59.747 52.174 0.00 0.00 0.00 3.51
2108 2666 3.117701 ACTCGATCCTCTCCTTCTCATCA 60.118 47.826 0.00 0.00 0.00 3.07
2208 2766 2.837591 TCCTATTACCACTCTGCTGCAA 59.162 45.455 3.02 0.00 0.00 4.08
2285 2843 3.427098 CGCAGTTGTAGTCCGACATCTTA 60.427 47.826 0.40 0.00 28.89 2.10
2318 2876 5.010213 CCTCAAATGTACTACTCCCTAGCTC 59.990 48.000 0.00 0.00 0.00 4.09
2411 3735 9.391006 ACTTCTTTTGTTCTTTGTACTGTCATA 57.609 29.630 0.00 0.00 0.00 2.15
2412 3736 8.281212 ACTTCTTTTGTTCTTTGTACTGTCAT 57.719 30.769 0.00 0.00 0.00 3.06
2429 3753 9.850628 GGCGTCCTAATTTTTATTACTTCTTTT 57.149 29.630 0.00 0.00 0.00 2.27
2430 3754 8.179615 CGGCGTCCTAATTTTTATTACTTCTTT 58.820 33.333 0.00 0.00 0.00 2.52
2431 3755 7.550196 TCGGCGTCCTAATTTTTATTACTTCTT 59.450 33.333 6.85 0.00 0.00 2.52
2434 3758 7.797038 ATCGGCGTCCTAATTTTTATTACTT 57.203 32.000 6.85 0.00 0.00 2.24
2436 3760 8.219105 CACTATCGGCGTCCTAATTTTTATTAC 58.781 37.037 6.85 0.00 0.00 1.89
2437 3761 7.095523 GCACTATCGGCGTCCTAATTTTTATTA 60.096 37.037 6.85 0.00 0.00 0.98
2439 3763 5.178809 GCACTATCGGCGTCCTAATTTTTAT 59.821 40.000 6.85 0.00 0.00 1.40
2440 3764 4.508861 GCACTATCGGCGTCCTAATTTTTA 59.491 41.667 6.85 0.00 0.00 1.52
2441 3765 3.311596 GCACTATCGGCGTCCTAATTTTT 59.688 43.478 6.85 0.00 0.00 1.94
2442 3766 2.870411 GCACTATCGGCGTCCTAATTTT 59.130 45.455 6.85 0.00 0.00 1.82
2443 3767 2.480845 GCACTATCGGCGTCCTAATTT 58.519 47.619 6.85 0.00 0.00 1.82
2446 3770 1.038681 TGGCACTATCGGCGTCCTAA 61.039 55.000 6.85 0.00 0.00 2.69
2447 3771 1.454295 TGGCACTATCGGCGTCCTA 60.454 57.895 6.85 0.00 0.00 2.94
2454 3778 1.080093 ACACGTGTGGCACTATCGG 60.080 57.895 22.71 15.05 34.19 4.18
2455 3779 2.070049 CACACGTGTGGCACTATCG 58.930 57.895 35.65 20.65 42.10 2.92
2468 3792 2.125673 CCCTCTAACGCCCACACG 60.126 66.667 0.00 0.00 39.50 4.49
2515 4214 1.409661 GGTGTGTGGGTTGTTCCTCTT 60.410 52.381 0.00 0.00 36.25 2.85
2516 4215 0.182775 GGTGTGTGGGTTGTTCCTCT 59.817 55.000 0.00 0.00 36.25 3.69
2567 4283 0.179065 GGGGTGTGGGCGTTATCTAC 60.179 60.000 0.00 0.00 0.00 2.59
2682 4863 7.041712 TCAGCGACATGACAACTACAATTAAAA 60.042 33.333 0.00 0.00 0.00 1.52
2697 4935 0.317160 ACCGAAGTTCAGCGACATGA 59.683 50.000 0.00 0.00 0.00 3.07
2737 4975 1.274167 CAGTTGAGCAACCATGGCAAT 59.726 47.619 13.04 0.00 42.06 3.56
2783 5021 6.576662 ATTTTGAAATCATGGCAATTGCAA 57.423 29.167 30.32 21.81 44.36 4.08
3091 5342 1.528309 CTTCGCCCACACCCAAAGT 60.528 57.895 0.00 0.00 0.00 2.66
3110 5361 2.036006 GGCGTGTGGGCGTTTATCA 61.036 57.895 0.00 0.00 0.00 2.15
3139 5469 1.604604 CCACACGTCCTTTTCACCAT 58.395 50.000 0.00 0.00 0.00 3.55
3183 5514 1.755380 GCCACGTAGGACTAAGATGGT 59.245 52.381 8.04 0.00 41.22 3.55
3184 5515 1.754803 TGCCACGTAGGACTAAGATGG 59.245 52.381 8.04 4.94 41.22 3.51
3185 5516 2.165641 TGTGCCACGTAGGACTAAGATG 59.834 50.000 7.20 0.00 41.22 2.90
3186 5517 2.165845 GTGTGCCACGTAGGACTAAGAT 59.834 50.000 7.20 0.00 41.22 2.40
3187 5518 1.542915 GTGTGCCACGTAGGACTAAGA 59.457 52.381 7.20 0.00 41.22 2.10
3223 5554 2.736144 TTCTACACGAATCTTGGCGT 57.264 45.000 0.00 0.00 42.11 5.68
3238 5569 4.224147 TGGATTCTCGTCCAACCAATTCTA 59.776 41.667 0.00 0.00 45.03 2.10
3292 5623 1.134340 AGAAACACTAACGCCCACACA 60.134 47.619 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.