Multiple sequence alignment - TraesCS4A01G035900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G035900 chr4A 100.000 3578 0 0 1 3578 28603275 28599698 0.000000e+00 6608.0
1 TraesCS4A01G035900 chr4A 96.234 239 9 0 1 239 731427472 731427710 3.350000e-105 392.0
2 TraesCS4A01G035900 chr4A 91.429 140 10 2 3293 3431 28599091 28599229 1.310000e-44 191.0
3 TraesCS4A01G035900 chr4A 86.207 145 15 4 3281 3423 583694041 583693900 6.190000e-33 152.0
4 TraesCS4A01G035900 chr4D 88.957 2608 152 56 630 3155 439293749 439291196 0.000000e+00 3096.0
5 TraesCS4A01G035900 chr4D 95.960 99 4 0 3190 3288 439291199 439291101 1.030000e-35 161.0
6 TraesCS4A01G035900 chr4D 81.481 135 13 10 498 627 439293946 439293819 2.270000e-17 100.0
7 TraesCS4A01G035900 chr4B 87.418 2750 157 84 632 3288 543401118 543398465 0.000000e+00 2987.0
8 TraesCS4A01G035900 chr4B 81.152 191 13 14 449 627 543401356 543401177 8.060000e-27 132.0
9 TraesCS4A01G035900 chr2A 96.853 286 8 1 3294 3578 161931403 161931688 8.990000e-131 477.0
10 TraesCS4A01G035900 chr2A 96.610 236 8 0 1 236 197485553 197485318 3.350000e-105 392.0
11 TraesCS4A01G035900 chr2A 96.610 236 8 0 1 236 597848047 597847812 3.350000e-105 392.0
12 TraesCS4A01G035900 chr2A 92.308 143 9 2 3293 3434 161932306 161932165 6.060000e-48 202.0
13 TraesCS4A01G035900 chr7A 97.863 234 5 0 1 234 166489592 166489825 4.300000e-109 405.0
14 TraesCS4A01G035900 chr3A 97.436 234 6 0 1 234 583229141 583228908 2.000000e-107 399.0
15 TraesCS4A01G035900 chr6A 96.653 239 8 0 1 239 14631499 14631737 7.200000e-107 398.0
16 TraesCS4A01G035900 chr5A 96.624 237 8 0 1 237 660449731 660449495 9.310000e-106 394.0
17 TraesCS4A01G035900 chr2B 95.902 244 8 2 1 243 8745880 8745638 9.310000e-106 394.0
18 TraesCS4A01G035900 chr6B 96.610 236 8 0 1 236 547713882 547713647 3.350000e-105 392.0
19 TraesCS4A01G035900 chr1B 92.308 143 10 1 3293 3434 489991311 489991169 6.060000e-48 202.0
20 TraesCS4A01G035900 chr1B 91.176 136 10 2 3290 3424 489928568 489928702 2.190000e-42 183.0
21 TraesCS4A01G035900 chr1B 93.506 77 5 0 3423 3499 489991152 489991076 8.120000e-22 115.0
22 TraesCS4A01G035900 chr5D 97.143 35 1 0 2532 2566 562062906 562062872 3.860000e-05 60.2
23 TraesCS4A01G035900 chr5B 97.143 35 1 0 2532 2566 712436665 712436631 3.860000e-05 60.2
24 TraesCS4A01G035900 chr7B 100.000 29 0 0 2532 2560 642448 642476 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G035900 chr4A 28599698 28603275 3577 True 6608.0 6608 100.000000 1 3578 1 chr4A.!!$R1 3577
1 TraesCS4A01G035900 chr4D 439291101 439293946 2845 True 1119.0 3096 88.799333 498 3288 3 chr4D.!!$R1 2790
2 TraesCS4A01G035900 chr4B 543398465 543401356 2891 True 1559.5 2987 84.285000 449 3288 2 chr4B.!!$R1 2839

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
431 432 0.040425 GTTCCAAGACGCGCAAACAT 60.040 50.0 5.73 0.0 0.0 2.71 F
589 603 0.179001 CCGGTGGAAGAAAAGGTGGT 60.179 55.0 0.00 0.0 0.0 4.16 F
766 866 0.250513 CTTCCGCTTGCCTTCTACCT 59.749 55.0 0.00 0.0 0.0 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2311 2490 0.320946 TGTTGTTGGTAGTAGCCGCC 60.321 55.0 0.0 0.0 0.00 6.13 R
2312 2491 1.076332 CTGTTGTTGGTAGTAGCCGC 58.924 55.0 0.0 0.0 0.00 6.53 R
2670 2866 0.027455 CTCTCGTCGCTGTCTGCTAG 59.973 60.0 0.0 0.0 40.11 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.546674 AGCCCTTTGGTTTATAGGAATGG 58.453 43.478 0.00 0.00 0.00 3.16
23 24 4.231890 AGCCCTTTGGTTTATAGGAATGGA 59.768 41.667 0.00 0.00 0.00 3.41
24 25 5.103086 AGCCCTTTGGTTTATAGGAATGGAT 60.103 40.000 0.00 0.00 0.00 3.41
25 26 5.602561 GCCCTTTGGTTTATAGGAATGGATT 59.397 40.000 0.00 0.00 0.00 3.01
26 27 6.239317 GCCCTTTGGTTTATAGGAATGGATTC 60.239 42.308 0.00 0.00 36.08 2.52
60 61 3.493767 GGATTGGTTCCTATCCTCCAC 57.506 52.381 19.71 0.00 41.78 4.02
61 62 2.777692 GGATTGGTTCCTATCCTCCACA 59.222 50.000 19.71 0.00 41.78 4.17
62 63 3.395941 GGATTGGTTCCTATCCTCCACAT 59.604 47.826 19.71 0.00 41.78 3.21
63 64 4.141158 GGATTGGTTCCTATCCTCCACATT 60.141 45.833 19.71 0.00 41.78 2.71
64 65 4.946160 TTGGTTCCTATCCTCCACATTT 57.054 40.909 0.00 0.00 0.00 2.32
65 66 4.503714 TGGTTCCTATCCTCCACATTTC 57.496 45.455 0.00 0.00 0.00 2.17
66 67 3.849574 TGGTTCCTATCCTCCACATTTCA 59.150 43.478 0.00 0.00 0.00 2.69
67 68 4.478317 TGGTTCCTATCCTCCACATTTCAT 59.522 41.667 0.00 0.00 0.00 2.57
68 69 5.669904 TGGTTCCTATCCTCCACATTTCATA 59.330 40.000 0.00 0.00 0.00 2.15
69 70 6.183361 TGGTTCCTATCCTCCACATTTCATAG 60.183 42.308 0.00 0.00 0.00 2.23
70 71 6.234177 GTTCCTATCCTCCACATTTCATAGG 58.766 44.000 0.00 0.00 35.93 2.57
71 72 5.726560 TCCTATCCTCCACATTTCATAGGA 58.273 41.667 2.01 2.01 39.61 2.94
72 73 6.150332 TCCTATCCTCCACATTTCATAGGAA 58.850 40.000 3.47 0.00 39.17 3.36
73 74 6.619437 TCCTATCCTCCACATTTCATAGGAAA 59.381 38.462 4.85 4.85 46.36 3.13
74 75 7.128728 TCCTATCCTCCACATTTCATAGGAAAA 59.871 37.037 6.65 0.00 45.52 2.29
75 76 7.946776 CCTATCCTCCACATTTCATAGGAAAAT 59.053 37.037 6.65 0.00 45.52 1.82
78 79 9.713684 ATCCTCCACATTTCATAGGAAAATAAA 57.286 29.630 6.65 0.00 45.52 1.40
79 80 9.540538 TCCTCCACATTTCATAGGAAAATAAAA 57.459 29.630 6.65 0.00 45.52 1.52
99 100 5.505181 AAAAAGAGCCTAGACTCAATGGA 57.495 39.130 8.89 0.00 39.26 3.41
100 101 5.505181 AAAAGAGCCTAGACTCAATGGAA 57.495 39.130 8.89 0.00 39.26 3.53
101 102 5.505181 AAAGAGCCTAGACTCAATGGAAA 57.495 39.130 8.89 0.00 39.26 3.13
102 103 5.505181 AAGAGCCTAGACTCAATGGAAAA 57.495 39.130 8.89 0.00 39.26 2.29
103 104 5.505181 AGAGCCTAGACTCAATGGAAAAA 57.495 39.130 8.89 0.00 39.26 1.94
104 105 6.072199 AGAGCCTAGACTCAATGGAAAAAT 57.928 37.500 8.89 0.00 39.26 1.82
105 106 6.488715 AGAGCCTAGACTCAATGGAAAAATT 58.511 36.000 8.89 0.00 39.26 1.82
106 107 6.601217 AGAGCCTAGACTCAATGGAAAAATTC 59.399 38.462 8.89 0.00 39.26 2.17
107 108 6.488715 AGCCTAGACTCAATGGAAAAATTCT 58.511 36.000 0.00 0.00 0.00 2.40
108 109 6.950619 AGCCTAGACTCAATGGAAAAATTCTT 59.049 34.615 0.00 0.00 0.00 2.52
109 110 7.452813 AGCCTAGACTCAATGGAAAAATTCTTT 59.547 33.333 0.00 0.00 0.00 2.52
110 111 8.090831 GCCTAGACTCAATGGAAAAATTCTTTT 58.909 33.333 0.00 0.00 37.46 2.27
111 112 9.415544 CCTAGACTCAATGGAAAAATTCTTTTG 57.584 33.333 0.00 0.00 34.83 2.44
112 113 9.415544 CTAGACTCAATGGAAAAATTCTTTTGG 57.584 33.333 0.00 0.00 34.83 3.28
113 114 7.795047 AGACTCAATGGAAAAATTCTTTTGGT 58.205 30.769 0.00 0.00 34.83 3.67
114 115 7.712205 AGACTCAATGGAAAAATTCTTTTGGTG 59.288 33.333 0.00 0.00 34.83 4.17
115 116 7.337938 ACTCAATGGAAAAATTCTTTTGGTGT 58.662 30.769 0.00 0.00 34.83 4.16
116 117 7.495606 ACTCAATGGAAAAATTCTTTTGGTGTC 59.504 33.333 0.00 0.00 34.83 3.67
117 118 7.334090 TCAATGGAAAAATTCTTTTGGTGTCA 58.666 30.769 0.00 0.00 34.83 3.58
118 119 7.826252 TCAATGGAAAAATTCTTTTGGTGTCAA 59.174 29.630 0.00 0.00 34.83 3.18
119 120 6.976636 TGGAAAAATTCTTTTGGTGTCAAC 57.023 33.333 0.00 0.00 34.83 3.18
139 140 7.111247 TCAACCAAATGACATCTTGTTTTCT 57.889 32.000 0.00 0.00 0.00 2.52
140 141 8.231692 TCAACCAAATGACATCTTGTTTTCTA 57.768 30.769 0.00 0.00 0.00 2.10
141 142 8.352201 TCAACCAAATGACATCTTGTTTTCTAG 58.648 33.333 0.00 0.00 0.00 2.43
142 143 7.823745 ACCAAATGACATCTTGTTTTCTAGT 57.176 32.000 0.00 0.00 0.00 2.57
143 144 7.875971 ACCAAATGACATCTTGTTTTCTAGTC 58.124 34.615 0.00 0.00 0.00 2.59
144 145 7.040409 ACCAAATGACATCTTGTTTTCTAGTCC 60.040 37.037 0.00 0.00 0.00 3.85
145 146 7.175641 CCAAATGACATCTTGTTTTCTAGTCCT 59.824 37.037 0.00 0.00 0.00 3.85
146 147 9.219603 CAAATGACATCTTGTTTTCTAGTCCTA 57.780 33.333 0.00 0.00 0.00 2.94
147 148 8.779354 AATGACATCTTGTTTTCTAGTCCTAC 57.221 34.615 0.00 0.00 0.00 3.18
148 149 7.540474 TGACATCTTGTTTTCTAGTCCTACT 57.460 36.000 0.00 0.00 0.00 2.57
149 150 7.603651 TGACATCTTGTTTTCTAGTCCTACTC 58.396 38.462 0.00 0.00 0.00 2.59
150 151 7.232737 TGACATCTTGTTTTCTAGTCCTACTCA 59.767 37.037 0.00 0.00 0.00 3.41
151 152 8.140112 ACATCTTGTTTTCTAGTCCTACTCAT 57.860 34.615 0.00 0.00 0.00 2.90
152 153 9.256228 ACATCTTGTTTTCTAGTCCTACTCATA 57.744 33.333 0.00 0.00 0.00 2.15
155 156 9.529823 TCTTGTTTTCTAGTCCTACTCATAAGA 57.470 33.333 0.00 0.00 0.00 2.10
162 163 9.922477 TTCTAGTCCTACTCATAAGATTTGAGA 57.078 33.333 7.63 0.00 42.63 3.27
166 167 9.647918 AGTCCTACTCATAAGATTTGAGATACA 57.352 33.333 7.63 0.00 42.63 2.29
222 223 9.661954 TCCTATGATAATCCTATCCTATGAACC 57.338 37.037 0.00 0.00 34.10 3.62
223 224 9.439461 CCTATGATAATCCTATCCTATGAACCA 57.561 37.037 0.00 0.00 34.10 3.67
230 231 6.500589 TCCTATCCTATGAACCAAAAGAGG 57.499 41.667 0.00 0.00 0.00 3.69
231 232 5.066593 CCTATCCTATGAACCAAAAGAGGC 58.933 45.833 0.00 0.00 0.00 4.70
232 233 3.366052 TCCTATGAACCAAAAGAGGCC 57.634 47.619 0.00 0.00 0.00 5.19
233 234 2.919602 TCCTATGAACCAAAAGAGGCCT 59.080 45.455 3.86 3.86 0.00 5.19
234 235 4.108570 TCCTATGAACCAAAAGAGGCCTA 58.891 43.478 4.42 0.00 0.00 3.93
235 236 4.538490 TCCTATGAACCAAAAGAGGCCTAA 59.462 41.667 4.42 0.00 0.00 2.69
236 237 5.014755 TCCTATGAACCAAAAGAGGCCTAAA 59.985 40.000 4.42 0.00 0.00 1.85
237 238 5.714806 CCTATGAACCAAAAGAGGCCTAAAA 59.285 40.000 4.42 0.00 0.00 1.52
238 239 4.929819 TGAACCAAAAGAGGCCTAAAAC 57.070 40.909 4.42 0.00 0.00 2.43
239 240 4.282496 TGAACCAAAAGAGGCCTAAAACA 58.718 39.130 4.42 0.00 0.00 2.83
240 241 4.712337 TGAACCAAAAGAGGCCTAAAACAA 59.288 37.500 4.42 0.00 0.00 2.83
241 242 4.937201 ACCAAAAGAGGCCTAAAACAAG 57.063 40.909 4.42 0.00 0.00 3.16
242 243 4.542697 ACCAAAAGAGGCCTAAAACAAGA 58.457 39.130 4.42 0.00 0.00 3.02
243 244 4.584743 ACCAAAAGAGGCCTAAAACAAGAG 59.415 41.667 4.42 0.00 0.00 2.85
244 245 4.827284 CCAAAAGAGGCCTAAAACAAGAGA 59.173 41.667 4.42 0.00 0.00 3.10
245 246 5.301805 CCAAAAGAGGCCTAAAACAAGAGAA 59.698 40.000 4.42 0.00 0.00 2.87
246 247 6.209361 CAAAAGAGGCCTAAAACAAGAGAAC 58.791 40.000 4.42 0.00 0.00 3.01
247 248 4.706842 AGAGGCCTAAAACAAGAGAACA 57.293 40.909 4.42 0.00 0.00 3.18
248 249 4.390264 AGAGGCCTAAAACAAGAGAACAC 58.610 43.478 4.42 0.00 0.00 3.32
249 250 4.103311 AGAGGCCTAAAACAAGAGAACACT 59.897 41.667 4.42 0.00 0.00 3.55
250 251 4.390264 AGGCCTAAAACAAGAGAACACTC 58.610 43.478 1.29 0.00 0.00 3.51
251 252 3.502595 GGCCTAAAACAAGAGAACACTCC 59.497 47.826 0.00 0.00 0.00 3.85
252 253 3.186613 GCCTAAAACAAGAGAACACTCCG 59.813 47.826 0.00 0.00 0.00 4.63
253 254 4.628074 CCTAAAACAAGAGAACACTCCGA 58.372 43.478 0.00 0.00 0.00 4.55
254 255 4.448060 CCTAAAACAAGAGAACACTCCGAC 59.552 45.833 0.00 0.00 0.00 4.79
255 256 2.135664 AACAAGAGAACACTCCGACG 57.864 50.000 0.00 0.00 0.00 5.12
256 257 1.030457 ACAAGAGAACACTCCGACGT 58.970 50.000 0.00 0.00 0.00 4.34
257 258 1.407979 ACAAGAGAACACTCCGACGTT 59.592 47.619 0.00 0.00 0.00 3.99
258 259 2.620115 ACAAGAGAACACTCCGACGTTA 59.380 45.455 0.00 0.00 0.00 3.18
259 260 3.067180 ACAAGAGAACACTCCGACGTTAA 59.933 43.478 0.00 0.00 0.00 2.01
260 261 4.235360 CAAGAGAACACTCCGACGTTAAT 58.765 43.478 0.00 0.00 0.00 1.40
261 262 4.094090 AGAGAACACTCCGACGTTAATC 57.906 45.455 0.00 0.00 0.00 1.75
262 263 3.504906 AGAGAACACTCCGACGTTAATCA 59.495 43.478 0.00 0.00 0.00 2.57
263 264 4.158025 AGAGAACACTCCGACGTTAATCAT 59.842 41.667 0.00 0.00 0.00 2.45
264 265 4.817517 AGAACACTCCGACGTTAATCATT 58.182 39.130 0.00 0.00 0.00 2.57
265 266 4.625742 AGAACACTCCGACGTTAATCATTG 59.374 41.667 0.00 0.00 0.00 2.82
266 267 2.671396 ACACTCCGACGTTAATCATTGC 59.329 45.455 0.00 0.00 0.00 3.56
267 268 2.930040 CACTCCGACGTTAATCATTGCT 59.070 45.455 0.00 0.00 0.00 3.91
268 269 2.930040 ACTCCGACGTTAATCATTGCTG 59.070 45.455 0.00 0.00 0.00 4.41
269 270 2.276201 TCCGACGTTAATCATTGCTGG 58.724 47.619 0.00 0.00 0.00 4.85
270 271 2.006888 CCGACGTTAATCATTGCTGGT 58.993 47.619 0.00 0.00 0.00 4.00
271 272 2.418628 CCGACGTTAATCATTGCTGGTT 59.581 45.455 0.00 0.00 0.00 3.67
272 273 3.485216 CCGACGTTAATCATTGCTGGTTC 60.485 47.826 0.00 0.00 0.00 3.62
273 274 3.485216 CGACGTTAATCATTGCTGGTTCC 60.485 47.826 0.00 0.00 0.00 3.62
274 275 3.417101 ACGTTAATCATTGCTGGTTCCA 58.583 40.909 0.00 0.00 0.00 3.53
275 276 3.823873 ACGTTAATCATTGCTGGTTCCAA 59.176 39.130 0.00 0.00 0.00 3.53
276 277 4.082787 ACGTTAATCATTGCTGGTTCCAAG 60.083 41.667 0.00 0.00 0.00 3.61
277 278 4.155826 CGTTAATCATTGCTGGTTCCAAGA 59.844 41.667 0.00 0.00 0.00 3.02
278 279 5.644644 GTTAATCATTGCTGGTTCCAAGAG 58.355 41.667 0.00 0.00 0.00 2.85
279 280 3.726557 ATCATTGCTGGTTCCAAGAGA 57.273 42.857 0.00 0.00 0.00 3.10
280 281 3.063510 TCATTGCTGGTTCCAAGAGAG 57.936 47.619 0.00 0.00 0.00 3.20
281 282 2.089980 CATTGCTGGTTCCAAGAGAGG 58.910 52.381 0.00 0.00 0.00 3.69
282 283 0.401738 TTGCTGGTTCCAAGAGAGGG 59.598 55.000 0.00 0.00 0.00 4.30
283 284 1.301293 GCTGGTTCCAAGAGAGGGG 59.699 63.158 0.00 0.00 0.00 4.79
284 285 1.492993 GCTGGTTCCAAGAGAGGGGT 61.493 60.000 0.00 0.00 0.00 4.95
285 286 0.326264 CTGGTTCCAAGAGAGGGGTG 59.674 60.000 0.00 0.00 0.00 4.61
286 287 1.133809 TGGTTCCAAGAGAGGGGTGG 61.134 60.000 0.00 0.00 0.00 4.61
287 288 1.002011 GTTCCAAGAGAGGGGTGGC 60.002 63.158 0.00 0.00 32.10 5.01
288 289 1.151810 TTCCAAGAGAGGGGTGGCT 60.152 57.895 0.00 0.00 32.10 4.75
289 290 0.772124 TTCCAAGAGAGGGGTGGCTT 60.772 55.000 0.00 0.00 32.10 4.35
290 291 1.001641 CCAAGAGAGGGGTGGCTTG 60.002 63.158 0.00 0.00 37.93 4.01
291 292 1.492133 CCAAGAGAGGGGTGGCTTGA 61.492 60.000 0.00 0.00 39.97 3.02
292 293 0.322008 CAAGAGAGGGGTGGCTTGAC 60.322 60.000 0.00 0.00 39.97 3.18
293 294 1.831652 AAGAGAGGGGTGGCTTGACG 61.832 60.000 0.00 0.00 0.00 4.35
294 295 3.316573 GAGAGGGGTGGCTTGACGG 62.317 68.421 0.00 0.00 0.00 4.79
301 302 2.359850 TGGCTTGACGGCATCACC 60.360 61.111 0.00 0.00 44.12 4.02
310 311 3.197614 GGCATCACCGACGAGAGA 58.802 61.111 0.00 0.00 0.00 3.10
311 312 1.226717 GGCATCACCGACGAGAGAC 60.227 63.158 0.00 0.00 0.00 3.36
320 321 3.790795 GACGAGAGACGAGATGACG 57.209 57.895 0.00 0.00 45.77 4.35
328 329 2.642425 ACGAGATGACGTCCACTGT 58.358 52.632 14.12 9.85 43.02 3.55
329 330 0.959553 ACGAGATGACGTCCACTGTT 59.040 50.000 14.12 0.00 43.02 3.16
330 331 1.340248 ACGAGATGACGTCCACTGTTT 59.660 47.619 14.12 0.00 43.02 2.83
331 332 1.721389 CGAGATGACGTCCACTGTTTG 59.279 52.381 14.12 0.00 0.00 2.93
332 333 1.461127 GAGATGACGTCCACTGTTTGC 59.539 52.381 14.12 0.00 0.00 3.68
333 334 0.517316 GATGACGTCCACTGTTTGCC 59.483 55.000 14.12 0.00 0.00 4.52
334 335 0.889186 ATGACGTCCACTGTTTGCCC 60.889 55.000 14.12 0.00 0.00 5.36
335 336 2.590575 ACGTCCACTGTTTGCCCG 60.591 61.111 0.00 0.00 0.00 6.13
336 337 2.590575 CGTCCACTGTTTGCCCGT 60.591 61.111 0.00 0.00 0.00 5.28
337 338 2.892334 CGTCCACTGTTTGCCCGTG 61.892 63.158 0.00 0.00 0.00 4.94
338 339 1.822186 GTCCACTGTTTGCCCGTGT 60.822 57.895 0.00 0.00 0.00 4.49
339 340 0.533308 GTCCACTGTTTGCCCGTGTA 60.533 55.000 0.00 0.00 0.00 2.90
340 341 0.250124 TCCACTGTTTGCCCGTGTAG 60.250 55.000 0.00 0.00 0.00 2.74
341 342 1.574428 CACTGTTTGCCCGTGTAGC 59.426 57.895 0.00 0.00 0.00 3.58
342 343 1.147376 ACTGTTTGCCCGTGTAGCA 59.853 52.632 0.00 0.00 38.81 3.49
343 344 0.250727 ACTGTTTGCCCGTGTAGCAT 60.251 50.000 0.00 0.00 40.59 3.79
344 345 0.168788 CTGTTTGCCCGTGTAGCATG 59.831 55.000 0.00 0.00 40.59 4.06
345 346 1.154035 GTTTGCCCGTGTAGCATGC 60.154 57.895 10.51 10.51 40.59 4.06
346 347 1.303236 TTTGCCCGTGTAGCATGCT 60.303 52.632 25.99 25.99 40.59 3.79
347 348 1.305219 TTTGCCCGTGTAGCATGCTC 61.305 55.000 26.57 16.23 40.59 4.26
348 349 3.264897 GCCCGTGTAGCATGCTCG 61.265 66.667 26.57 21.30 37.44 5.03
349 350 2.494445 CCCGTGTAGCATGCTCGA 59.506 61.111 26.57 9.20 40.02 4.04
350 351 1.153647 CCCGTGTAGCATGCTCGAA 60.154 57.895 26.57 8.24 40.02 3.71
351 352 0.739462 CCCGTGTAGCATGCTCGAAA 60.739 55.000 26.57 2.95 40.02 3.46
352 353 0.370273 CCGTGTAGCATGCTCGAAAC 59.630 55.000 26.57 17.46 40.02 2.78
353 354 1.350193 CGTGTAGCATGCTCGAAACT 58.650 50.000 26.57 0.00 40.02 2.66
354 355 2.526077 CGTGTAGCATGCTCGAAACTA 58.474 47.619 26.57 0.65 40.02 2.24
355 356 2.921121 CGTGTAGCATGCTCGAAACTAA 59.079 45.455 26.57 0.00 40.02 2.24
356 357 3.551890 CGTGTAGCATGCTCGAAACTAAT 59.448 43.478 26.57 0.00 40.02 1.73
357 358 4.738252 CGTGTAGCATGCTCGAAACTAATA 59.262 41.667 26.57 0.00 40.02 0.98
358 359 5.231357 CGTGTAGCATGCTCGAAACTAATAA 59.769 40.000 26.57 0.00 40.02 1.40
359 360 6.074302 CGTGTAGCATGCTCGAAACTAATAAT 60.074 38.462 26.57 0.00 40.02 1.28
360 361 7.114388 CGTGTAGCATGCTCGAAACTAATAATA 59.886 37.037 26.57 0.00 40.02 0.98
361 362 8.761497 GTGTAGCATGCTCGAAACTAATAATAA 58.239 33.333 26.57 0.00 0.00 1.40
362 363 9.320352 TGTAGCATGCTCGAAACTAATAATAAA 57.680 29.630 26.57 0.00 0.00 1.40
365 366 8.673711 AGCATGCTCGAAACTAATAATAAAACA 58.326 29.630 16.30 0.00 0.00 2.83
366 367 9.284594 GCATGCTCGAAACTAATAATAAAACAA 57.715 29.630 11.37 0.00 0.00 2.83
380 381 9.855021 AATAATAAAACAAGAAAACATAGCGCT 57.145 25.926 17.26 17.26 0.00 5.92
381 382 7.566858 AATAAAACAAGAAAACATAGCGCTG 57.433 32.000 22.90 7.81 0.00 5.18
382 383 2.619013 ACAAGAAAACATAGCGCTGC 57.381 45.000 22.90 0.17 0.00 5.25
383 384 1.200020 ACAAGAAAACATAGCGCTGCC 59.800 47.619 22.90 0.76 0.00 4.85
384 385 0.447801 AAGAAAACATAGCGCTGCCG 59.552 50.000 22.90 10.73 37.57 5.69
405 406 3.251571 GCCGAACGATATAGGATTCACC 58.748 50.000 0.00 0.00 39.35 4.02
420 421 6.097915 GGATTCACCTATATCGTTCCAAGA 57.902 41.667 0.00 0.00 35.41 3.02
421 422 5.927115 GGATTCACCTATATCGTTCCAAGAC 59.073 44.000 0.00 0.00 35.41 3.01
422 423 4.563337 TCACCTATATCGTTCCAAGACG 57.437 45.455 0.00 0.00 44.06 4.18
423 424 3.050619 CACCTATATCGTTCCAAGACGC 58.949 50.000 0.00 0.00 42.50 5.19
424 425 2.287427 ACCTATATCGTTCCAAGACGCG 60.287 50.000 3.53 3.53 42.50 6.01
425 426 1.714460 CTATATCGTTCCAAGACGCGC 59.286 52.381 5.73 0.00 42.50 6.86
426 427 0.179121 ATATCGTTCCAAGACGCGCA 60.179 50.000 5.73 0.00 42.50 6.09
427 428 0.388778 TATCGTTCCAAGACGCGCAA 60.389 50.000 5.73 0.00 42.50 4.85
428 429 1.225376 ATCGTTCCAAGACGCGCAAA 61.225 50.000 5.73 0.00 42.50 3.68
429 430 1.721133 CGTTCCAAGACGCGCAAAC 60.721 57.895 5.73 0.80 36.12 2.93
430 431 1.353804 GTTCCAAGACGCGCAAACA 59.646 52.632 5.73 0.00 0.00 2.83
431 432 0.040425 GTTCCAAGACGCGCAAACAT 60.040 50.000 5.73 0.00 0.00 2.71
432 433 0.237235 TTCCAAGACGCGCAAACATC 59.763 50.000 5.73 0.00 0.00 3.06
433 434 0.882484 TCCAAGACGCGCAAACATCA 60.882 50.000 5.73 0.00 0.00 3.07
434 435 0.725784 CCAAGACGCGCAAACATCAC 60.726 55.000 5.73 0.00 0.00 3.06
435 436 1.054348 CAAGACGCGCAAACATCACG 61.054 55.000 5.73 0.00 0.00 4.35
436 437 1.218875 AAGACGCGCAAACATCACGA 61.219 50.000 5.73 0.00 0.00 4.35
437 438 1.507096 GACGCGCAAACATCACGAC 60.507 57.895 5.73 0.00 0.00 4.34
438 439 2.568029 CGCGCAAACATCACGACG 60.568 61.111 8.75 0.00 0.00 5.12
439 440 2.549282 GCGCAAACATCACGACGT 59.451 55.556 0.30 0.00 0.00 4.34
440 441 1.507096 GCGCAAACATCACGACGTC 60.507 57.895 5.18 5.18 0.00 4.34
441 442 1.886861 GCGCAAACATCACGACGTCT 61.887 55.000 14.70 0.00 0.00 4.18
442 443 1.333115 CGCAAACATCACGACGTCTA 58.667 50.000 14.70 0.00 0.00 2.59
443 444 1.917955 CGCAAACATCACGACGTCTAT 59.082 47.619 14.70 1.50 0.00 1.98
444 445 2.284457 CGCAAACATCACGACGTCTATG 60.284 50.000 14.70 15.69 0.00 2.23
445 446 2.029244 GCAAACATCACGACGTCTATGG 59.971 50.000 14.70 0.00 0.00 2.74
446 447 3.250744 CAAACATCACGACGTCTATGGT 58.749 45.455 14.70 10.24 0.00 3.55
447 448 4.417506 CAAACATCACGACGTCTATGGTA 58.582 43.478 14.70 0.00 0.00 3.25
453 454 3.758023 TCACGACGTCTATGGTAAAAGGA 59.242 43.478 14.70 0.00 0.00 3.36
455 456 3.119352 ACGACGTCTATGGTAAAAGGACC 60.119 47.826 14.70 0.00 40.21 4.46
467 468 1.149101 AAAGGACCAAAGGAGAGCCA 58.851 50.000 0.00 0.00 36.29 4.75
468 469 0.402121 AAGGACCAAAGGAGAGCCAC 59.598 55.000 0.00 0.00 36.29 5.01
469 470 1.376037 GGACCAAAGGAGAGCCACG 60.376 63.158 0.00 0.00 36.29 4.94
470 471 2.032681 ACCAAAGGAGAGCCACGC 59.967 61.111 0.00 0.00 36.29 5.34
472 473 3.121030 CAAAGGAGAGCCACGCCG 61.121 66.667 0.00 0.00 43.25 6.46
473 474 3.626924 AAAGGAGAGCCACGCCGT 61.627 61.111 0.00 0.00 43.25 5.68
474 475 3.883744 AAAGGAGAGCCACGCCGTG 62.884 63.158 10.95 10.95 43.25 4.94
476 477 3.755628 GGAGAGCCACGCCGTGTA 61.756 66.667 16.99 0.00 0.00 2.90
477 478 2.202623 GAGAGCCACGCCGTGTAG 60.203 66.667 16.99 2.59 0.00 2.74
478 479 2.675423 AGAGCCACGCCGTGTAGA 60.675 61.111 16.99 0.00 0.00 2.59
479 480 2.506438 GAGCCACGCCGTGTAGAC 60.506 66.667 16.99 2.66 0.00 2.59
480 481 3.277211 GAGCCACGCCGTGTAGACA 62.277 63.158 16.99 0.00 0.00 3.41
481 482 2.125673 GCCACGCCGTGTAGACAT 60.126 61.111 16.99 0.00 0.00 3.06
483 484 1.872234 CCACGCCGTGTAGACATCG 60.872 63.158 16.99 0.00 0.00 3.84
485 495 2.042259 ACGCCGTGTAGACATCGGA 61.042 57.895 20.51 0.00 40.45 4.55
490 500 2.268298 CCGTGTAGACATCGGAAAAGG 58.732 52.381 14.57 0.00 40.45 3.11
493 503 3.367025 CGTGTAGACATCGGAAAAGGAAC 59.633 47.826 0.00 0.00 0.00 3.62
496 506 1.985895 AGACATCGGAAAAGGAACCCT 59.014 47.619 0.00 0.00 33.87 4.34
508 518 3.108847 AGGAACCCTTTTTGTGAACCA 57.891 42.857 0.00 0.00 0.00 3.67
567 581 2.666596 CTAGCCAGGCAATCCGACCC 62.667 65.000 15.80 0.00 37.47 4.46
569 583 3.781307 CCAGGCAATCCGACCCGA 61.781 66.667 0.00 0.00 37.47 5.14
570 584 2.511600 CAGGCAATCCGACCCGAC 60.512 66.667 0.00 0.00 37.47 4.79
571 585 3.782443 AGGCAATCCGACCCGACC 61.782 66.667 0.00 0.00 37.47 4.79
586 600 0.250166 CGACCGGTGGAAGAAAAGGT 60.250 55.000 14.63 0.00 34.27 3.50
587 601 1.235724 GACCGGTGGAAGAAAAGGTG 58.764 55.000 14.63 0.00 31.35 4.00
589 603 0.179001 CCGGTGGAAGAAAAGGTGGT 60.179 55.000 0.00 0.00 0.00 4.16
590 604 1.072648 CCGGTGGAAGAAAAGGTGGTA 59.927 52.381 0.00 0.00 0.00 3.25
591 605 2.148768 CGGTGGAAGAAAAGGTGGTAC 58.851 52.381 0.00 0.00 0.00 3.34
592 606 2.148768 GGTGGAAGAAAAGGTGGTACG 58.851 52.381 0.00 0.00 0.00 3.67
593 607 2.224354 GGTGGAAGAAAAGGTGGTACGA 60.224 50.000 0.00 0.00 0.00 3.43
605 622 2.171725 GGTACGAGCAATGACGGGC 61.172 63.158 0.00 0.00 0.00 6.13
627 644 4.142816 GCTCACCTTTACATGACATGACAC 60.143 45.833 22.19 0.00 0.00 3.67
653 737 2.813908 GGCGTAACCAGCACTCCG 60.814 66.667 0.00 0.00 38.86 4.63
699 799 1.632948 GGCAGAAACTTACCGCGGAC 61.633 60.000 35.90 13.02 0.00 4.79
717 817 3.602677 GTGGATCGGATCGGGCGA 61.603 66.667 11.62 0.00 0.00 5.54
764 864 1.369839 GGCTTCCGCTTGCCTTCTAC 61.370 60.000 0.00 0.00 45.26 2.59
765 865 1.369839 GCTTCCGCTTGCCTTCTACC 61.370 60.000 0.00 0.00 0.00 3.18
766 866 0.250513 CTTCCGCTTGCCTTCTACCT 59.749 55.000 0.00 0.00 0.00 3.08
774 874 2.798364 GCCTTCTACCTCCTCCGGC 61.798 68.421 0.00 0.00 0.00 6.13
786 886 3.682292 CTCCGGCCCTTTCCTTCCG 62.682 68.421 0.00 0.00 41.41 4.30
859 962 3.479269 CGTCTCGTTCCGCTTGGC 61.479 66.667 0.00 0.00 0.00 4.52
862 965 1.374252 TCTCGTTCCGCTTGGCTTC 60.374 57.895 0.00 0.00 0.00 3.86
866 969 0.951040 CGTTCCGCTTGGCTTCTCTT 60.951 55.000 0.00 0.00 0.00 2.85
867 970 0.799393 GTTCCGCTTGGCTTCTCTTC 59.201 55.000 0.00 0.00 0.00 2.87
869 972 1.746991 CCGCTTGGCTTCTCTTCCC 60.747 63.158 0.00 0.00 0.00 3.97
870 973 1.298014 CGCTTGGCTTCTCTTCCCT 59.702 57.895 0.00 0.00 0.00 4.20
871 974 0.742635 CGCTTGGCTTCTCTTCCCTC 60.743 60.000 0.00 0.00 0.00 4.30
951 1072 7.034967 AGGTAGAGAGGAAGAGTCTAGAAAA 57.965 40.000 0.00 0.00 0.00 2.29
952 1073 7.471890 AGGTAGAGAGGAAGAGTCTAGAAAAA 58.528 38.462 0.00 0.00 0.00 1.94
954 1075 8.410912 GGTAGAGAGGAAGAGTCTAGAAAAATC 58.589 40.741 0.00 0.00 0.00 2.17
955 1076 9.185680 GTAGAGAGGAAGAGTCTAGAAAAATCT 57.814 37.037 0.00 0.00 0.00 2.40
956 1077 8.293699 AGAGAGGAAGAGTCTAGAAAAATCTC 57.706 38.462 0.00 0.00 0.00 2.75
957 1078 7.067008 AGAGAGGAAGAGTCTAGAAAAATCTCG 59.933 40.741 0.00 0.00 34.83 4.04
996 1117 3.127352 CTAGCCAGCCTCGTCGGTC 62.127 68.421 0.00 0.00 34.25 4.79
999 1120 3.827898 CCAGCCTCGTCGGTCTCC 61.828 72.222 0.00 0.00 34.25 3.71
1131 1252 1.035932 ACAGCATCAAGAGCATGCCC 61.036 55.000 15.66 1.16 46.76 5.36
1186 1316 2.880443 TCTGCCCTTCTCTGCATTTTT 58.120 42.857 0.00 0.00 36.79 1.94
1187 1317 2.559668 TCTGCCCTTCTCTGCATTTTTG 59.440 45.455 0.00 0.00 36.79 2.44
1200 1330 2.287644 GCATTTTTGTTTGGTCTGGTGC 59.712 45.455 0.00 0.00 0.00 5.01
1201 1331 3.795877 CATTTTTGTTTGGTCTGGTGCT 58.204 40.909 0.00 0.00 0.00 4.40
1202 1332 2.957491 TTTTGTTTGGTCTGGTGCTG 57.043 45.000 0.00 0.00 0.00 4.41
1203 1333 2.136298 TTTGTTTGGTCTGGTGCTGA 57.864 45.000 0.00 0.00 0.00 4.26
1206 1336 2.229792 TGTTTGGTCTGGTGCTGAATC 58.770 47.619 0.00 0.00 0.00 2.52
1207 1337 1.197721 GTTTGGTCTGGTGCTGAATCG 59.802 52.381 0.00 0.00 0.00 3.34
1208 1338 0.955428 TTGGTCTGGTGCTGAATCGC 60.955 55.000 0.00 0.00 0.00 4.58
1211 1341 1.742880 TCTGGTGCTGAATCGCTGC 60.743 57.895 0.00 0.00 41.36 5.25
1212 1342 1.744368 CTGGTGCTGAATCGCTGCT 60.744 57.895 0.00 0.00 41.53 4.24
1213 1343 1.302752 TGGTGCTGAATCGCTGCTT 60.303 52.632 0.00 0.00 41.53 3.91
1214 1344 1.300971 TGGTGCTGAATCGCTGCTTC 61.301 55.000 0.00 0.00 41.53 3.86
1217 1347 1.080435 TGCTGAATCGCTGCTTCTCG 61.080 55.000 0.00 0.00 41.53 4.04
1218 1348 0.803768 GCTGAATCGCTGCTTCTCGA 60.804 55.000 0.00 0.00 38.32 4.04
1597 1776 1.819632 CCCCACGCAATACTCTGCC 60.820 63.158 0.00 0.00 39.26 4.85
1656 1835 2.047769 CGATCTCTCCGCTTCGATTTC 58.952 52.381 0.00 0.00 33.59 2.17
1657 1836 2.287308 CGATCTCTCCGCTTCGATTTCT 60.287 50.000 0.00 0.00 33.59 2.52
1744 1923 5.456548 TCAGACGCCGGATATACAAAATA 57.543 39.130 5.05 0.00 0.00 1.40
1753 1932 6.238925 GCCGGATATACAAAATAAAAGGTGCT 60.239 38.462 5.05 0.00 0.00 4.40
1762 1941 6.037062 ACAAAATAAAAGGTGCTGTTTTGCTC 59.963 34.615 7.94 0.00 39.09 4.26
1781 1960 5.248640 TGCTCGGATTCTTCTTGATTCTTT 58.751 37.500 0.00 0.00 0.00 2.52
1784 1963 6.038050 GCTCGGATTCTTCTTGATTCTTTGAT 59.962 38.462 0.00 0.00 0.00 2.57
1788 1967 8.457261 CGGATTCTTCTTGATTCTTTGATTTCT 58.543 33.333 0.00 0.00 0.00 2.52
1792 1971 7.814642 TCTTCTTGATTCTTTGATTTCTCTGC 58.185 34.615 0.00 0.00 0.00 4.26
1837 2016 3.991773 TCTTCCGTTCGAAATTGACGATT 59.008 39.130 8.10 0.00 39.45 3.34
1838 2017 3.984018 TCCGTTCGAAATTGACGATTC 57.016 42.857 8.10 5.42 39.45 2.52
1855 2034 4.519350 ACGATTCTCTGTGTGTCTTGTCTA 59.481 41.667 0.00 0.00 0.00 2.59
1856 2035 4.854291 CGATTCTCTGTGTGTCTTGTCTAC 59.146 45.833 0.00 0.00 0.00 2.59
1905 2084 1.648467 GCAATGCCAAGGACGAGGTC 61.648 60.000 0.00 0.00 0.00 3.85
2060 2239 2.153322 GCGACGCCGAGAAGAAGAC 61.153 63.158 9.14 0.00 38.22 3.01
2069 2248 3.553096 GCCGAGAAGAAGACAGACAAAGA 60.553 47.826 0.00 0.00 0.00 2.52
2331 2510 1.076332 GCGGCTACTACCAACAACAG 58.924 55.000 0.00 0.00 0.00 3.16
2477 2668 4.284550 GCAGGAGCACCCCAACCA 62.285 66.667 0.00 0.00 41.58 3.67
2670 2866 3.242673 GCAGAAGAGCAATGCTGACATAC 60.243 47.826 14.48 0.00 39.88 2.39
2690 2886 2.202544 GCAGACAGCGACGAGAGG 60.203 66.667 0.00 0.00 0.00 3.69
2711 2907 3.378911 CTCCACTAGCTTAGCTTAGCC 57.621 52.381 20.52 3.76 42.20 3.93
2717 2913 4.342665 CACTAGCTTAGCTTAGCCCTAGTT 59.657 45.833 20.52 4.22 42.20 2.24
2718 2914 4.963628 ACTAGCTTAGCTTAGCCCTAGTTT 59.036 41.667 20.52 3.51 42.20 2.66
2719 2915 4.846168 AGCTTAGCTTAGCCCTAGTTTT 57.154 40.909 20.52 0.00 42.20 2.43
2728 2924 3.606595 AGCCCTAGTTTTTACTCGGAC 57.393 47.619 0.00 0.00 0.00 4.79
2785 2983 2.831526 CCGATCAAATTTTGGTTCCCCT 59.168 45.455 9.18 0.00 0.00 4.79
2786 2984 3.368323 CCGATCAAATTTTGGTTCCCCTG 60.368 47.826 9.18 0.00 0.00 4.45
2787 2985 3.599343 GATCAAATTTTGGTTCCCCTGC 58.401 45.455 9.18 0.00 0.00 4.85
2789 2987 1.699083 CAAATTTTGGTTCCCCTGCCT 59.301 47.619 0.97 0.00 0.00 4.75
2791 2989 1.644509 ATTTTGGTTCCCCTGCCTTC 58.355 50.000 0.00 0.00 0.00 3.46
2792 2990 0.471022 TTTTGGTTCCCCTGCCTTCC 60.471 55.000 0.00 0.00 0.00 3.46
2793 2991 1.660019 TTTGGTTCCCCTGCCTTCCA 61.660 55.000 0.00 0.00 0.00 3.53
2794 2992 1.442886 TTGGTTCCCCTGCCTTCCAT 61.443 55.000 0.00 0.00 0.00 3.41
2795 2993 1.076705 GGTTCCCCTGCCTTCCATC 60.077 63.158 0.00 0.00 0.00 3.51
2796 2994 1.452108 GTTCCCCTGCCTTCCATCG 60.452 63.158 0.00 0.00 0.00 3.84
2805 3003 4.847516 CTTCCATCGCGCGTCCGA 62.848 66.667 30.98 19.41 41.98 4.55
2813 3011 4.925576 GCGCGTCCGATGGTCGAT 62.926 66.667 8.43 0.00 43.74 3.59
2814 3012 2.726180 CGCGTCCGATGGTCGATC 60.726 66.667 6.67 0.00 43.74 3.69
2816 3014 1.065928 GCGTCCGATGGTCGATCTT 59.934 57.895 6.67 0.00 43.74 2.40
2839 3048 2.747460 TGCCACGAGCTCCATTGC 60.747 61.111 8.47 6.68 44.23 3.56
2871 3081 3.582164 TGATTTTAAGCCCCAGTGGTTT 58.418 40.909 8.74 2.33 41.04 3.27
2897 3108 9.281371 TGGCTAAATTAAGAGATGAATGAGATG 57.719 33.333 0.00 0.00 0.00 2.90
2898 3109 9.499479 GGCTAAATTAAGAGATGAATGAGATGA 57.501 33.333 0.00 0.00 0.00 2.92
2904 3115 8.585189 TTAAGAGATGAATGAGATGATCAACG 57.415 34.615 0.00 0.00 42.53 4.10
2905 3116 6.402456 AGAGATGAATGAGATGATCAACGA 57.598 37.500 0.00 0.00 42.53 3.85
2906 3117 6.814043 AGAGATGAATGAGATGATCAACGAA 58.186 36.000 0.00 0.00 42.53 3.85
2907 3118 7.443477 AGAGATGAATGAGATGATCAACGAAT 58.557 34.615 0.00 0.00 42.53 3.34
2908 3119 8.583296 AGAGATGAATGAGATGATCAACGAATA 58.417 33.333 0.00 0.00 42.53 1.75
2972 3183 1.623081 CGTTGAATCGTGGACCGGTG 61.623 60.000 14.63 0.00 37.11 4.94
3036 3248 1.631072 CGACGTGGTGATCAATCGC 59.369 57.895 0.00 0.00 36.61 4.58
3043 3255 1.284982 GGTGATCAATCGCCGATCGG 61.285 60.000 30.03 30.03 46.28 4.18
3054 3266 0.657840 GCCGATCGGGACAATTGAAG 59.342 55.000 33.98 5.76 38.47 3.02
3055 3267 1.742411 GCCGATCGGGACAATTGAAGA 60.742 52.381 33.98 5.96 38.47 2.87
3061 3273 1.087501 GGGACAATTGAAGAGGCGAC 58.912 55.000 13.59 0.00 0.00 5.19
3087 3299 7.584123 CGATTTCCACATTAAGAAGCGATTAAG 59.416 37.037 0.00 0.00 0.00 1.85
3089 3301 8.780846 TTTCCACATTAAGAAGCGATTAAGTA 57.219 30.769 0.00 0.00 0.00 2.24
3094 3306 2.884894 AGAAGCGATTAAGTACGGGG 57.115 50.000 0.00 0.00 0.00 5.73
3098 3310 2.105766 AGCGATTAAGTACGGGGAGTT 58.894 47.619 0.00 0.00 0.00 3.01
3099 3311 3.290710 AGCGATTAAGTACGGGGAGTTA 58.709 45.455 0.00 0.00 0.00 2.24
3121 3333 1.635663 CCTCGTTCATTGGACCGTGC 61.636 60.000 0.00 0.00 30.20 5.34
3128 3340 4.953868 TTGGACCGTGCGTCGTGG 62.954 66.667 0.00 0.00 42.99 4.94
3158 3370 6.887626 AGAAAATTTGCAGGCATTGAATTT 57.112 29.167 8.55 8.55 0.00 1.82
3160 3372 7.142680 AGAAAATTTGCAGGCATTGAATTTTG 58.857 30.769 22.53 0.00 0.00 2.44
3162 3374 3.766068 TTGCAGGCATTGAATTTTGGA 57.234 38.095 0.00 0.00 0.00 3.53
3163 3375 3.985019 TGCAGGCATTGAATTTTGGAT 57.015 38.095 0.00 0.00 0.00 3.41
3164 3376 4.289238 TGCAGGCATTGAATTTTGGATT 57.711 36.364 0.00 0.00 0.00 3.01
3165 3377 4.653868 TGCAGGCATTGAATTTTGGATTT 58.346 34.783 0.00 0.00 0.00 2.17
3166 3378 5.071370 TGCAGGCATTGAATTTTGGATTTT 58.929 33.333 0.00 0.00 0.00 1.82
3167 3379 5.048643 TGCAGGCATTGAATTTTGGATTTTG 60.049 36.000 0.00 0.00 0.00 2.44
3168 3380 5.620429 GCAGGCATTGAATTTTGGATTTTGG 60.620 40.000 0.00 0.00 0.00 3.28
3169 3381 5.706369 CAGGCATTGAATTTTGGATTTTGGA 59.294 36.000 0.00 0.00 0.00 3.53
3170 3382 5.941647 AGGCATTGAATTTTGGATTTTGGAG 59.058 36.000 0.00 0.00 0.00 3.86
3171 3383 5.124297 GGCATTGAATTTTGGATTTTGGAGG 59.876 40.000 0.00 0.00 0.00 4.30
3172 3384 5.392272 GCATTGAATTTTGGATTTTGGAGGC 60.392 40.000 0.00 0.00 0.00 4.70
3173 3385 5.565455 TTGAATTTTGGATTTTGGAGGCT 57.435 34.783 0.00 0.00 0.00 4.58
3174 3386 4.897140 TGAATTTTGGATTTTGGAGGCTG 58.103 39.130 0.00 0.00 0.00 4.85
3175 3387 3.986996 ATTTTGGATTTTGGAGGCTGG 57.013 42.857 0.00 0.00 0.00 4.85
3176 3388 0.975887 TTTGGATTTTGGAGGCTGGC 59.024 50.000 0.00 0.00 0.00 4.85
3177 3389 0.904394 TTGGATTTTGGAGGCTGGCC 60.904 55.000 3.00 3.00 0.00 5.36
3178 3390 2.418083 GGATTTTGGAGGCTGGCCG 61.418 63.158 5.93 0.00 41.95 6.13
3179 3391 3.068729 GATTTTGGAGGCTGGCCGC 62.069 63.158 10.60 10.60 41.95 6.53
3198 3410 2.420022 CGCCTTGAACCTTTGATGGTAG 59.580 50.000 0.00 0.00 39.83 3.18
3243 3455 2.483538 GGCAAAATTGGTGTTGTGCTCT 60.484 45.455 2.25 0.00 32.61 4.09
3245 3457 3.044986 CAAAATTGGTGTTGTGCTCTCG 58.955 45.455 0.00 0.00 0.00 4.04
3291 3503 3.719939 CGGGAGGATGGATAGGGAT 57.280 57.895 0.00 0.00 0.00 3.85
3292 3504 1.958288 CGGGAGGATGGATAGGGATT 58.042 55.000 0.00 0.00 0.00 3.01
3293 3505 2.269940 CGGGAGGATGGATAGGGATTT 58.730 52.381 0.00 0.00 0.00 2.17
3294 3506 2.644798 CGGGAGGATGGATAGGGATTTT 59.355 50.000 0.00 0.00 0.00 1.82
3295 3507 3.074538 CGGGAGGATGGATAGGGATTTTT 59.925 47.826 0.00 0.00 0.00 1.94
3315 3527 4.464069 TTTTGTCCAAAAAGACCACCTG 57.536 40.909 2.82 0.00 37.35 4.00
3316 3528 3.374042 TTGTCCAAAAAGACCACCTGA 57.626 42.857 0.00 0.00 35.83 3.86
3317 3529 2.650322 TGTCCAAAAAGACCACCTGAC 58.350 47.619 0.00 0.00 35.83 3.51
3318 3530 1.602377 GTCCAAAAAGACCACCTGACG 59.398 52.381 0.00 0.00 0.00 4.35
3319 3531 1.487142 TCCAAAAAGACCACCTGACGA 59.513 47.619 0.00 0.00 0.00 4.20
3320 3532 2.092861 TCCAAAAAGACCACCTGACGAA 60.093 45.455 0.00 0.00 0.00 3.85
3321 3533 2.884639 CCAAAAAGACCACCTGACGAAT 59.115 45.455 0.00 0.00 0.00 3.34
3322 3534 3.058224 CCAAAAAGACCACCTGACGAATC 60.058 47.826 0.00 0.00 0.00 2.52
3323 3535 2.080286 AAAGACCACCTGACGAATCG 57.920 50.000 0.00 0.00 0.00 3.34
3324 3536 1.254026 AAGACCACCTGACGAATCGA 58.746 50.000 10.55 0.00 0.00 3.59
3325 3537 1.254026 AGACCACCTGACGAATCGAA 58.746 50.000 10.55 0.00 0.00 3.71
3326 3538 1.825474 AGACCACCTGACGAATCGAAT 59.175 47.619 10.55 0.00 0.00 3.34
3327 3539 2.233922 AGACCACCTGACGAATCGAATT 59.766 45.455 10.55 0.00 0.00 2.17
3328 3540 2.346803 ACCACCTGACGAATCGAATTG 58.653 47.619 10.55 0.00 0.00 2.32
3329 3541 1.062587 CCACCTGACGAATCGAATTGC 59.937 52.381 10.55 0.00 0.00 3.56
3330 3542 2.002586 CACCTGACGAATCGAATTGCT 58.997 47.619 10.55 0.00 0.00 3.91
3331 3543 3.186909 CACCTGACGAATCGAATTGCTA 58.813 45.455 10.55 0.00 0.00 3.49
3332 3544 3.243877 CACCTGACGAATCGAATTGCTAG 59.756 47.826 10.55 0.00 0.00 3.42
3333 3545 3.130516 ACCTGACGAATCGAATTGCTAGA 59.869 43.478 10.55 0.00 0.00 2.43
3334 3546 4.112634 CCTGACGAATCGAATTGCTAGAA 58.887 43.478 10.55 0.00 0.00 2.10
3335 3547 4.566759 CCTGACGAATCGAATTGCTAGAAA 59.433 41.667 10.55 0.00 0.00 2.52
3336 3548 5.063438 CCTGACGAATCGAATTGCTAGAAAA 59.937 40.000 10.55 0.00 0.00 2.29
3337 3549 6.094739 TGACGAATCGAATTGCTAGAAAAG 57.905 37.500 10.55 0.00 0.00 2.27
3338 3550 5.867174 TGACGAATCGAATTGCTAGAAAAGA 59.133 36.000 10.55 0.00 0.00 2.52
3339 3551 6.095947 ACGAATCGAATTGCTAGAAAAGAC 57.904 37.500 10.55 0.00 0.00 3.01
3340 3552 5.063564 ACGAATCGAATTGCTAGAAAAGACC 59.936 40.000 10.55 0.00 0.00 3.85
3341 3553 5.502544 CGAATCGAATTGCTAGAAAAGACCC 60.503 44.000 0.00 0.00 0.00 4.46
3342 3554 4.553330 TCGAATTGCTAGAAAAGACCCT 57.447 40.909 0.00 0.00 0.00 4.34
3343 3555 5.670792 TCGAATTGCTAGAAAAGACCCTA 57.329 39.130 0.00 0.00 0.00 3.53
3344 3556 5.416947 TCGAATTGCTAGAAAAGACCCTAC 58.583 41.667 0.00 0.00 0.00 3.18
3345 3557 5.187186 TCGAATTGCTAGAAAAGACCCTACT 59.813 40.000 0.00 0.00 0.00 2.57
3346 3558 6.379133 TCGAATTGCTAGAAAAGACCCTACTA 59.621 38.462 0.00 0.00 0.00 1.82
3347 3559 7.039882 CGAATTGCTAGAAAAGACCCTACTAA 58.960 38.462 0.00 0.00 0.00 2.24
3348 3560 7.548075 CGAATTGCTAGAAAAGACCCTACTAAA 59.452 37.037 0.00 0.00 0.00 1.85
3349 3561 9.227777 GAATTGCTAGAAAAGACCCTACTAAAA 57.772 33.333 0.00 0.00 0.00 1.52
3350 3562 7.974482 TTGCTAGAAAAGACCCTACTAAAAC 57.026 36.000 0.00 0.00 0.00 2.43
3351 3563 7.069877 TGCTAGAAAAGACCCTACTAAAACA 57.930 36.000 0.00 0.00 0.00 2.83
3352 3564 7.511268 TGCTAGAAAAGACCCTACTAAAACAA 58.489 34.615 0.00 0.00 0.00 2.83
3353 3565 7.994334 TGCTAGAAAAGACCCTACTAAAACAAA 59.006 33.333 0.00 0.00 0.00 2.83
3354 3566 9.011095 GCTAGAAAAGACCCTACTAAAACAAAT 57.989 33.333 0.00 0.00 0.00 2.32
3357 3569 9.416284 AGAAAAGACCCTACTAAAACAAATTGA 57.584 29.630 0.00 0.00 0.00 2.57
3358 3570 9.459640 GAAAAGACCCTACTAAAACAAATTGAC 57.540 33.333 0.00 0.00 0.00 3.18
3359 3571 8.528044 AAAGACCCTACTAAAACAAATTGACA 57.472 30.769 0.00 0.00 0.00 3.58
3360 3572 8.528044 AAGACCCTACTAAAACAAATTGACAA 57.472 30.769 0.00 0.00 0.00 3.18
3361 3573 8.528044 AGACCCTACTAAAACAAATTGACAAA 57.472 30.769 0.00 0.00 0.00 2.83
3362 3574 8.973182 AGACCCTACTAAAACAAATTGACAAAA 58.027 29.630 0.00 0.00 0.00 2.44
3363 3575 9.589111 GACCCTACTAAAACAAATTGACAAAAA 57.411 29.630 0.00 0.00 0.00 1.94
3379 3591 2.052782 AAAAAGACCAGCTGAACCGT 57.947 45.000 17.39 3.76 0.00 4.83
3380 3592 1.308998 AAAAGACCAGCTGAACCGTG 58.691 50.000 17.39 0.00 0.00 4.94
3381 3593 0.535102 AAAGACCAGCTGAACCGTGG 60.535 55.000 17.39 0.00 37.38 4.94
3382 3594 3.050275 GACCAGCTGAACCGTGGC 61.050 66.667 17.39 0.00 34.40 5.01
3383 3595 4.988598 ACCAGCTGAACCGTGGCG 62.989 66.667 17.39 0.00 34.40 5.69
3414 3626 3.434319 CCGACATGTGGCACCTGC 61.434 66.667 20.74 13.17 41.14 4.85
3428 3640 2.433838 CTGCCGTCACAGGAGCAG 60.434 66.667 0.00 0.00 45.92 4.24
3429 3641 4.007644 TGCCGTCACAGGAGCAGG 62.008 66.667 0.00 0.00 0.00 4.85
3431 3643 4.007644 CCGTCACAGGAGCAGGCA 62.008 66.667 0.00 0.00 0.00 4.75
3432 3644 2.433838 CGTCACAGGAGCAGGCAG 60.434 66.667 0.00 0.00 0.00 4.85
3433 3645 2.745492 GTCACAGGAGCAGGCAGC 60.745 66.667 0.00 0.00 46.19 5.25
3443 3655 3.465403 CAGGCAGCTACTCGGGCT 61.465 66.667 0.00 0.00 45.90 5.19
3444 3656 2.685380 AGGCAGCTACTCGGGCTT 60.685 61.111 0.00 0.00 42.69 4.35
3445 3657 1.381327 AGGCAGCTACTCGGGCTTA 60.381 57.895 0.00 0.00 42.69 3.09
3446 3658 0.976073 AGGCAGCTACTCGGGCTTAA 60.976 55.000 0.00 0.00 42.69 1.85
3447 3659 0.810426 GGCAGCTACTCGGGCTTAAC 60.810 60.000 0.00 0.00 38.03 2.01
3448 3660 0.108329 GCAGCTACTCGGGCTTAACA 60.108 55.000 0.00 0.00 38.03 2.41
3449 3661 1.927895 CAGCTACTCGGGCTTAACAG 58.072 55.000 0.00 0.00 38.03 3.16
3450 3662 0.824759 AGCTACTCGGGCTTAACAGG 59.175 55.000 0.00 0.00 36.56 4.00
3451 3663 0.535797 GCTACTCGGGCTTAACAGGT 59.464 55.000 0.00 0.00 0.00 4.00
3452 3664 1.066358 GCTACTCGGGCTTAACAGGTT 60.066 52.381 0.00 0.00 0.00 3.50
3453 3665 2.614734 GCTACTCGGGCTTAACAGGTTT 60.615 50.000 0.00 0.00 0.00 3.27
3454 3666 3.368739 GCTACTCGGGCTTAACAGGTTTA 60.369 47.826 0.00 0.00 0.00 2.01
3455 3667 3.994931 ACTCGGGCTTAACAGGTTTAT 57.005 42.857 0.00 0.00 0.00 1.40
3456 3668 4.296621 ACTCGGGCTTAACAGGTTTATT 57.703 40.909 0.00 0.00 0.00 1.40
3457 3669 4.259356 ACTCGGGCTTAACAGGTTTATTC 58.741 43.478 0.00 0.00 0.00 1.75
3458 3670 3.264104 TCGGGCTTAACAGGTTTATTCG 58.736 45.455 0.00 0.00 0.00 3.34
3459 3671 3.004862 CGGGCTTAACAGGTTTATTCGT 58.995 45.455 0.00 0.00 0.00 3.85
3460 3672 3.063045 CGGGCTTAACAGGTTTATTCGTC 59.937 47.826 0.00 0.00 0.00 4.20
3461 3673 3.376234 GGGCTTAACAGGTTTATTCGTCC 59.624 47.826 0.00 0.00 0.00 4.79
3462 3674 3.063045 GGCTTAACAGGTTTATTCGTCCG 59.937 47.826 0.00 0.00 0.00 4.79
3463 3675 3.063045 GCTTAACAGGTTTATTCGTCCGG 59.937 47.826 0.00 0.00 0.00 5.14
3464 3676 4.497300 CTTAACAGGTTTATTCGTCCGGA 58.503 43.478 0.00 0.00 0.00 5.14
3465 3677 3.405823 AACAGGTTTATTCGTCCGGAA 57.594 42.857 5.23 0.00 39.42 4.30
3466 3678 3.405823 ACAGGTTTATTCGTCCGGAAA 57.594 42.857 5.23 0.00 38.36 3.13
3467 3679 3.332034 ACAGGTTTATTCGTCCGGAAAG 58.668 45.455 5.23 3.23 38.36 2.62
3468 3680 3.244318 ACAGGTTTATTCGTCCGGAAAGT 60.244 43.478 5.23 0.00 38.36 2.66
3469 3681 4.021192 ACAGGTTTATTCGTCCGGAAAGTA 60.021 41.667 5.23 0.00 38.36 2.24
3470 3682 4.565564 CAGGTTTATTCGTCCGGAAAGTAG 59.434 45.833 5.23 0.00 38.36 2.57
3471 3683 3.308053 GGTTTATTCGTCCGGAAAGTAGC 59.692 47.826 5.23 0.00 38.36 3.58
3472 3684 4.179298 GTTTATTCGTCCGGAAAGTAGCT 58.821 43.478 5.23 0.00 38.36 3.32
3473 3685 2.295253 ATTCGTCCGGAAAGTAGCTG 57.705 50.000 5.23 0.00 38.36 4.24
3474 3686 0.389426 TTCGTCCGGAAAGTAGCTGC 60.389 55.000 5.23 0.00 0.00 5.25
3475 3687 1.080093 CGTCCGGAAAGTAGCTGCA 60.080 57.895 5.23 0.00 0.00 4.41
3476 3688 0.669318 CGTCCGGAAAGTAGCTGCAA 60.669 55.000 5.23 0.00 0.00 4.08
3477 3689 0.796927 GTCCGGAAAGTAGCTGCAAC 59.203 55.000 5.23 0.00 0.00 4.17
3478 3690 0.669318 TCCGGAAAGTAGCTGCAACG 60.669 55.000 0.00 2.69 0.00 4.10
3479 3691 1.635663 CCGGAAAGTAGCTGCAACGG 61.636 60.000 4.12 8.22 0.00 4.44
3480 3692 0.669318 CGGAAAGTAGCTGCAACGGA 60.669 55.000 4.12 0.00 0.00 4.69
3481 3693 1.519408 GGAAAGTAGCTGCAACGGAA 58.481 50.000 4.12 0.00 0.00 4.30
3482 3694 1.197036 GGAAAGTAGCTGCAACGGAAC 59.803 52.381 4.12 0.00 0.00 3.62
3495 3707 3.411700 GGAACGGATTGGAGGGGT 58.588 61.111 0.00 0.00 0.00 4.95
3496 3708 1.077716 GGAACGGATTGGAGGGGTG 60.078 63.158 0.00 0.00 0.00 4.61
3497 3709 1.077716 GAACGGATTGGAGGGGTGG 60.078 63.158 0.00 0.00 0.00 4.61
3498 3710 2.552231 GAACGGATTGGAGGGGTGGG 62.552 65.000 0.00 0.00 0.00 4.61
3499 3711 4.506255 CGGATTGGAGGGGTGGGC 62.506 72.222 0.00 0.00 0.00 5.36
3500 3712 4.143301 GGATTGGAGGGGTGGGCC 62.143 72.222 0.00 0.00 0.00 5.80
3532 3744 2.738521 CCAGACGGCACCAACTCG 60.739 66.667 0.00 0.00 0.00 4.18
3533 3745 3.414700 CAGACGGCACCAACTCGC 61.415 66.667 0.00 0.00 0.00 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.231890 TCCATTCCTATAAACCAAAGGGCT 59.768 41.667 0.00 0.00 37.90 5.19
1 2 4.542697 TCCATTCCTATAAACCAAAGGGC 58.457 43.478 0.00 0.00 37.90 5.19
2 3 7.290110 GAATCCATTCCTATAAACCAAAGGG 57.710 40.000 0.00 0.00 41.29 3.95
41 42 4.713792 ATGTGGAGGATAGGAACCAATC 57.286 45.455 0.00 0.00 34.11 2.67
42 43 5.044179 TGAAATGTGGAGGATAGGAACCAAT 60.044 40.000 0.00 0.00 34.11 3.16
43 44 4.290985 TGAAATGTGGAGGATAGGAACCAA 59.709 41.667 0.00 0.00 34.11 3.67
44 45 3.849574 TGAAATGTGGAGGATAGGAACCA 59.150 43.478 0.00 0.00 0.00 3.67
45 46 4.503714 TGAAATGTGGAGGATAGGAACC 57.496 45.455 0.00 0.00 0.00 3.62
46 47 6.043243 TCCTATGAAATGTGGAGGATAGGAAC 59.957 42.308 0.00 0.00 38.86 3.62
47 48 6.150332 TCCTATGAAATGTGGAGGATAGGAA 58.850 40.000 0.00 0.00 38.86 3.36
48 49 5.726560 TCCTATGAAATGTGGAGGATAGGA 58.273 41.667 0.00 0.00 39.29 2.94
49 50 6.439636 TTCCTATGAAATGTGGAGGATAGG 57.560 41.667 0.00 0.00 36.22 2.57
50 51 8.930846 ATTTTCCTATGAAATGTGGAGGATAG 57.069 34.615 0.00 0.00 40.08 2.08
52 53 9.713684 TTTATTTTCCTATGAAATGTGGAGGAT 57.286 29.630 0.00 0.00 40.08 3.24
53 54 9.540538 TTTTATTTTCCTATGAAATGTGGAGGA 57.459 29.630 0.00 0.00 40.08 3.71
77 78 5.505181 TCCATTGAGTCTAGGCTCTTTTT 57.495 39.130 24.20 4.72 36.51 1.94
78 79 5.505181 TTCCATTGAGTCTAGGCTCTTTT 57.495 39.130 24.20 7.12 36.51 2.27
79 80 5.505181 TTTCCATTGAGTCTAGGCTCTTT 57.495 39.130 24.20 9.56 36.51 2.52
80 81 5.505181 TTTTCCATTGAGTCTAGGCTCTT 57.495 39.130 24.20 9.92 36.51 2.85
81 82 5.505181 TTTTTCCATTGAGTCTAGGCTCT 57.495 39.130 24.20 2.95 36.51 4.09
82 83 6.601217 AGAATTTTTCCATTGAGTCTAGGCTC 59.399 38.462 17.74 17.74 36.12 4.70
83 84 6.488715 AGAATTTTTCCATTGAGTCTAGGCT 58.511 36.000 0.00 0.00 0.00 4.58
84 85 6.765915 AGAATTTTTCCATTGAGTCTAGGC 57.234 37.500 0.00 0.00 0.00 3.93
114 115 6.980397 AGAAAACAAGATGTCATTTGGTTGAC 59.020 34.615 10.05 0.00 45.05 3.18
115 116 7.111247 AGAAAACAAGATGTCATTTGGTTGA 57.889 32.000 10.05 0.00 34.64 3.18
116 117 8.137437 ACTAGAAAACAAGATGTCATTTGGTTG 58.863 33.333 0.00 4.95 34.64 3.77
117 118 8.237811 ACTAGAAAACAAGATGTCATTTGGTT 57.762 30.769 0.00 8.16 35.84 3.67
118 119 7.040409 GGACTAGAAAACAAGATGTCATTTGGT 60.040 37.037 0.00 3.75 0.00 3.67
119 120 7.175641 AGGACTAGAAAACAAGATGTCATTTGG 59.824 37.037 0.00 0.00 0.00 3.28
120 121 8.103948 AGGACTAGAAAACAAGATGTCATTTG 57.896 34.615 0.00 0.00 0.00 2.32
121 122 9.220767 GTAGGACTAGAAAACAAGATGTCATTT 57.779 33.333 0.00 0.00 0.00 2.32
122 123 8.598041 AGTAGGACTAGAAAACAAGATGTCATT 58.402 33.333 0.00 0.00 0.00 2.57
123 124 8.140112 AGTAGGACTAGAAAACAAGATGTCAT 57.860 34.615 0.00 0.00 0.00 3.06
124 125 7.232737 TGAGTAGGACTAGAAAACAAGATGTCA 59.767 37.037 0.00 0.00 0.00 3.58
125 126 7.603651 TGAGTAGGACTAGAAAACAAGATGTC 58.396 38.462 0.00 0.00 0.00 3.06
126 127 7.540474 TGAGTAGGACTAGAAAACAAGATGT 57.460 36.000 0.00 0.00 0.00 3.06
129 130 9.529823 TCTTATGAGTAGGACTAGAAAACAAGA 57.470 33.333 0.00 0.00 0.00 3.02
136 137 9.922477 TCTCAAATCTTATGAGTAGGACTAGAA 57.078 33.333 0.00 0.00 43.77 2.10
140 141 9.647918 TGTATCTCAAATCTTATGAGTAGGACT 57.352 33.333 3.72 0.00 43.77 3.85
196 197 9.661954 GGTTCATAGGATAGGATTATCATAGGA 57.338 37.037 0.00 1.09 39.88 2.94
197 198 9.439461 TGGTTCATAGGATAGGATTATCATAGG 57.561 37.037 0.00 0.00 36.37 2.57
204 205 8.660435 CCTCTTTTGGTTCATAGGATAGGATTA 58.340 37.037 0.00 0.00 28.27 1.75
205 206 7.521669 CCTCTTTTGGTTCATAGGATAGGATT 58.478 38.462 0.00 0.00 28.27 3.01
206 207 6.466470 GCCTCTTTTGGTTCATAGGATAGGAT 60.466 42.308 0.00 0.00 28.27 3.24
207 208 5.163195 GCCTCTTTTGGTTCATAGGATAGGA 60.163 44.000 0.00 0.00 0.00 2.94
208 209 5.066593 GCCTCTTTTGGTTCATAGGATAGG 58.933 45.833 0.00 0.00 0.00 2.57
209 210 5.066593 GGCCTCTTTTGGTTCATAGGATAG 58.933 45.833 0.00 0.00 0.00 2.08
210 211 4.726825 AGGCCTCTTTTGGTTCATAGGATA 59.273 41.667 0.00 0.00 0.00 2.59
211 212 3.529319 AGGCCTCTTTTGGTTCATAGGAT 59.471 43.478 0.00 0.00 0.00 3.24
212 213 2.919602 AGGCCTCTTTTGGTTCATAGGA 59.080 45.455 0.00 0.00 0.00 2.94
213 214 3.372440 AGGCCTCTTTTGGTTCATAGG 57.628 47.619 0.00 0.00 0.00 2.57
214 215 6.208599 TGTTTTAGGCCTCTTTTGGTTCATAG 59.791 38.462 9.68 0.00 0.00 2.23
215 216 6.071984 TGTTTTAGGCCTCTTTTGGTTCATA 58.928 36.000 9.68 0.00 0.00 2.15
216 217 4.898861 TGTTTTAGGCCTCTTTTGGTTCAT 59.101 37.500 9.68 0.00 0.00 2.57
217 218 4.282496 TGTTTTAGGCCTCTTTTGGTTCA 58.718 39.130 9.68 0.00 0.00 3.18
218 219 4.929819 TGTTTTAGGCCTCTTTTGGTTC 57.070 40.909 9.68 0.00 0.00 3.62
219 220 4.959839 TCTTGTTTTAGGCCTCTTTTGGTT 59.040 37.500 9.68 0.00 0.00 3.67
220 221 4.542697 TCTTGTTTTAGGCCTCTTTTGGT 58.457 39.130 9.68 0.00 0.00 3.67
221 222 4.827284 TCTCTTGTTTTAGGCCTCTTTTGG 59.173 41.667 9.68 0.00 0.00 3.28
222 223 6.183360 TGTTCTCTTGTTTTAGGCCTCTTTTG 60.183 38.462 9.68 0.00 0.00 2.44
223 224 5.891551 TGTTCTCTTGTTTTAGGCCTCTTTT 59.108 36.000 9.68 0.00 0.00 2.27
224 225 5.299531 GTGTTCTCTTGTTTTAGGCCTCTTT 59.700 40.000 9.68 0.00 0.00 2.52
225 226 4.822350 GTGTTCTCTTGTTTTAGGCCTCTT 59.178 41.667 9.68 0.00 0.00 2.85
226 227 4.103311 AGTGTTCTCTTGTTTTAGGCCTCT 59.897 41.667 9.68 0.00 0.00 3.69
227 228 4.390264 AGTGTTCTCTTGTTTTAGGCCTC 58.610 43.478 9.68 0.00 0.00 4.70
228 229 4.390264 GAGTGTTCTCTTGTTTTAGGCCT 58.610 43.478 11.78 11.78 37.68 5.19
229 230 3.502595 GGAGTGTTCTCTTGTTTTAGGCC 59.497 47.826 0.00 0.00 40.29 5.19
230 231 3.186613 CGGAGTGTTCTCTTGTTTTAGGC 59.813 47.826 0.00 0.00 40.29 3.93
231 232 4.448060 GTCGGAGTGTTCTCTTGTTTTAGG 59.552 45.833 0.00 0.00 40.29 2.69
232 233 4.148348 CGTCGGAGTGTTCTCTTGTTTTAG 59.852 45.833 0.00 0.00 40.29 1.85
233 234 4.046462 CGTCGGAGTGTTCTCTTGTTTTA 58.954 43.478 0.00 0.00 40.29 1.52
234 235 2.864343 CGTCGGAGTGTTCTCTTGTTTT 59.136 45.455 0.00 0.00 40.29 2.43
235 236 2.159142 ACGTCGGAGTGTTCTCTTGTTT 60.159 45.455 0.00 0.00 40.29 2.83
236 237 1.407979 ACGTCGGAGTGTTCTCTTGTT 59.592 47.619 0.00 0.00 40.29 2.83
237 238 1.030457 ACGTCGGAGTGTTCTCTTGT 58.970 50.000 0.00 0.00 40.29 3.16
238 239 2.135664 AACGTCGGAGTGTTCTCTTG 57.864 50.000 0.00 0.00 40.29 3.02
239 240 3.996150 TTAACGTCGGAGTGTTCTCTT 57.004 42.857 0.00 0.00 40.29 2.85
240 241 3.504906 TGATTAACGTCGGAGTGTTCTCT 59.495 43.478 0.00 0.00 40.29 3.10
241 242 3.829948 TGATTAACGTCGGAGTGTTCTC 58.170 45.455 0.00 0.00 39.76 2.87
242 243 3.928727 TGATTAACGTCGGAGTGTTCT 57.071 42.857 0.00 0.00 0.00 3.01
243 244 4.724036 GCAATGATTAACGTCGGAGTGTTC 60.724 45.833 0.00 0.00 0.00 3.18
244 245 3.124636 GCAATGATTAACGTCGGAGTGTT 59.875 43.478 0.00 1.75 0.00 3.32
245 246 2.671396 GCAATGATTAACGTCGGAGTGT 59.329 45.455 0.00 0.00 0.00 3.55
246 247 2.930040 AGCAATGATTAACGTCGGAGTG 59.070 45.455 0.00 0.00 0.00 3.51
247 248 2.930040 CAGCAATGATTAACGTCGGAGT 59.070 45.455 0.00 0.00 0.00 3.85
248 249 2.285220 CCAGCAATGATTAACGTCGGAG 59.715 50.000 0.00 0.00 0.00 4.63
249 250 2.276201 CCAGCAATGATTAACGTCGGA 58.724 47.619 0.00 0.00 0.00 4.55
250 251 2.006888 ACCAGCAATGATTAACGTCGG 58.993 47.619 0.00 0.00 0.00 4.79
251 252 3.485216 GGAACCAGCAATGATTAACGTCG 60.485 47.826 0.00 0.00 0.00 5.12
252 253 3.438781 TGGAACCAGCAATGATTAACGTC 59.561 43.478 0.00 0.00 0.00 4.34
253 254 3.417101 TGGAACCAGCAATGATTAACGT 58.583 40.909 0.00 0.00 0.00 3.99
254 255 4.155826 TCTTGGAACCAGCAATGATTAACG 59.844 41.667 0.00 0.00 0.00 3.18
255 256 5.415701 TCTCTTGGAACCAGCAATGATTAAC 59.584 40.000 0.00 0.00 0.00 2.01
256 257 5.569355 TCTCTTGGAACCAGCAATGATTAA 58.431 37.500 0.00 0.00 0.00 1.40
257 258 5.178096 TCTCTTGGAACCAGCAATGATTA 57.822 39.130 0.00 0.00 0.00 1.75
258 259 4.015084 CTCTCTTGGAACCAGCAATGATT 58.985 43.478 0.00 0.00 0.00 2.57
259 260 3.618351 CTCTCTTGGAACCAGCAATGAT 58.382 45.455 0.00 0.00 0.00 2.45
260 261 2.290514 CCTCTCTTGGAACCAGCAATGA 60.291 50.000 0.00 0.00 0.00 2.57
261 262 2.089980 CCTCTCTTGGAACCAGCAATG 58.910 52.381 0.00 0.00 0.00 2.82
262 263 1.005215 CCCTCTCTTGGAACCAGCAAT 59.995 52.381 0.00 0.00 0.00 3.56
263 264 0.401738 CCCTCTCTTGGAACCAGCAA 59.598 55.000 0.00 0.00 0.00 3.91
264 265 1.492133 CCCCTCTCTTGGAACCAGCA 61.492 60.000 0.00 0.00 0.00 4.41
265 266 1.301293 CCCCTCTCTTGGAACCAGC 59.699 63.158 0.00 0.00 0.00 4.85
266 267 0.326264 CACCCCTCTCTTGGAACCAG 59.674 60.000 0.00 0.00 0.00 4.00
267 268 1.133809 CCACCCCTCTCTTGGAACCA 61.134 60.000 0.00 0.00 31.39 3.67
268 269 1.685820 CCACCCCTCTCTTGGAACC 59.314 63.158 0.00 0.00 31.39 3.62
269 270 1.002011 GCCACCCCTCTCTTGGAAC 60.002 63.158 0.00 0.00 31.39 3.62
270 271 0.772124 AAGCCACCCCTCTCTTGGAA 60.772 55.000 0.00 0.00 31.39 3.53
271 272 1.151810 AAGCCACCCCTCTCTTGGA 60.152 57.895 0.00 0.00 31.39 3.53
272 273 1.001641 CAAGCCACCCCTCTCTTGG 60.002 63.158 0.00 0.00 34.04 3.61
273 274 0.322008 GTCAAGCCACCCCTCTCTTG 60.322 60.000 0.00 0.00 37.76 3.02
274 275 1.831652 CGTCAAGCCACCCCTCTCTT 61.832 60.000 0.00 0.00 0.00 2.85
275 276 2.286523 CGTCAAGCCACCCCTCTCT 61.287 63.158 0.00 0.00 0.00 3.10
276 277 2.266055 CGTCAAGCCACCCCTCTC 59.734 66.667 0.00 0.00 0.00 3.20
277 278 3.322466 CCGTCAAGCCACCCCTCT 61.322 66.667 0.00 0.00 0.00 3.69
280 281 4.740822 ATGCCGTCAAGCCACCCC 62.741 66.667 0.00 0.00 0.00 4.95
281 282 3.134127 GATGCCGTCAAGCCACCC 61.134 66.667 0.00 0.00 0.00 4.61
282 283 2.359850 TGATGCCGTCAAGCCACC 60.360 61.111 0.00 0.00 32.78 4.61
283 284 2.690778 GGTGATGCCGTCAAGCCAC 61.691 63.158 0.00 0.00 38.90 5.01
284 285 2.359850 GGTGATGCCGTCAAGCCA 60.360 61.111 0.00 0.00 38.90 4.75
293 294 1.226717 GTCTCTCGTCGGTGATGCC 60.227 63.158 0.00 0.00 0.00 4.40
294 295 1.583967 CGTCTCTCGTCGGTGATGC 60.584 63.158 0.00 0.00 34.52 3.91
295 296 0.026933 CTCGTCTCTCGTCGGTGATG 59.973 60.000 0.00 0.00 40.80 3.07
296 297 0.108281 TCTCGTCTCTCGTCGGTGAT 60.108 55.000 0.00 0.00 40.80 3.06
297 298 0.108281 ATCTCGTCTCTCGTCGGTGA 60.108 55.000 0.00 0.00 40.80 4.02
298 299 0.026933 CATCTCGTCTCTCGTCGGTG 59.973 60.000 0.00 0.00 40.80 4.94
299 300 0.108281 TCATCTCGTCTCTCGTCGGT 60.108 55.000 0.00 0.00 40.80 4.69
300 301 0.302288 GTCATCTCGTCTCTCGTCGG 59.698 60.000 0.00 0.00 40.80 4.79
301 302 0.043737 CGTCATCTCGTCTCTCGTCG 60.044 60.000 0.00 0.00 40.80 5.12
302 303 1.000884 ACGTCATCTCGTCTCTCGTC 58.999 55.000 0.00 0.00 40.04 4.20
303 304 3.140576 ACGTCATCTCGTCTCTCGT 57.859 52.632 0.00 0.00 40.04 4.18
310 311 0.959553 AACAGTGGACGTCATCTCGT 59.040 50.000 18.91 11.68 46.88 4.18
311 312 1.721389 CAAACAGTGGACGTCATCTCG 59.279 52.381 18.91 11.14 0.00 4.04
312 313 1.461127 GCAAACAGTGGACGTCATCTC 59.539 52.381 18.91 0.00 0.00 2.75
313 314 1.512926 GCAAACAGTGGACGTCATCT 58.487 50.000 18.91 11.67 0.00 2.90
314 315 0.517316 GGCAAACAGTGGACGTCATC 59.483 55.000 18.91 9.43 0.00 2.92
315 316 0.889186 GGGCAAACAGTGGACGTCAT 60.889 55.000 18.91 0.00 0.00 3.06
316 317 1.525077 GGGCAAACAGTGGACGTCA 60.525 57.895 18.91 0.27 0.00 4.35
317 318 2.604174 CGGGCAAACAGTGGACGTC 61.604 63.158 7.13 7.13 0.00 4.34
318 319 2.590575 CGGGCAAACAGTGGACGT 60.591 61.111 0.00 0.00 0.00 4.34
319 320 2.590575 ACGGGCAAACAGTGGACG 60.591 61.111 0.00 0.00 0.00 4.79
320 321 3.030652 CACGGGCAAACAGTGGAC 58.969 61.111 0.00 0.00 40.93 4.02
324 325 0.250727 ATGCTACACGGGCAAACAGT 60.251 50.000 0.00 0.00 43.14 3.55
325 326 0.168788 CATGCTACACGGGCAAACAG 59.831 55.000 0.00 0.00 43.14 3.16
326 327 1.861542 GCATGCTACACGGGCAAACA 61.862 55.000 11.37 0.00 43.14 2.83
327 328 1.154035 GCATGCTACACGGGCAAAC 60.154 57.895 11.37 0.00 43.14 2.93
328 329 1.303236 AGCATGCTACACGGGCAAA 60.303 52.632 21.21 0.00 43.14 3.68
329 330 1.745115 GAGCATGCTACACGGGCAA 60.745 57.895 22.74 0.00 43.14 4.52
330 331 2.125147 GAGCATGCTACACGGGCA 60.125 61.111 22.74 0.00 44.05 5.36
331 332 3.264897 CGAGCATGCTACACGGGC 61.265 66.667 22.74 5.10 0.00 6.13
332 333 0.739462 TTTCGAGCATGCTACACGGG 60.739 55.000 22.74 6.12 0.00 5.28
333 334 0.370273 GTTTCGAGCATGCTACACGG 59.630 55.000 22.74 7.97 0.00 4.94
334 335 1.350193 AGTTTCGAGCATGCTACACG 58.650 50.000 22.74 20.14 0.00 4.49
335 336 6.583912 TTATTAGTTTCGAGCATGCTACAC 57.416 37.500 22.74 14.38 0.00 2.90
336 337 8.880878 TTATTATTAGTTTCGAGCATGCTACA 57.119 30.769 22.74 7.13 0.00 2.74
339 340 8.673711 TGTTTTATTATTAGTTTCGAGCATGCT 58.326 29.630 22.92 22.92 0.00 3.79
340 341 8.835467 TGTTTTATTATTAGTTTCGAGCATGC 57.165 30.769 10.51 10.51 0.00 4.06
354 355 9.855021 AGCGCTATGTTTTCTTGTTTTATTATT 57.145 25.926 8.99 0.00 0.00 1.40
355 356 9.289303 CAGCGCTATGTTTTCTTGTTTTATTAT 57.711 29.630 10.99 0.00 0.00 1.28
356 357 7.272515 GCAGCGCTATGTTTTCTTGTTTTATTA 59.727 33.333 10.99 0.00 0.00 0.98
357 358 6.089417 GCAGCGCTATGTTTTCTTGTTTTATT 59.911 34.615 10.99 0.00 0.00 1.40
358 359 5.572896 GCAGCGCTATGTTTTCTTGTTTTAT 59.427 36.000 10.99 0.00 0.00 1.40
359 360 4.915085 GCAGCGCTATGTTTTCTTGTTTTA 59.085 37.500 10.99 0.00 0.00 1.52
360 361 3.735746 GCAGCGCTATGTTTTCTTGTTTT 59.264 39.130 10.99 0.00 0.00 2.43
361 362 3.308530 GCAGCGCTATGTTTTCTTGTTT 58.691 40.909 10.99 0.00 0.00 2.83
362 363 2.351738 GGCAGCGCTATGTTTTCTTGTT 60.352 45.455 10.99 0.00 0.00 2.83
363 364 1.200020 GGCAGCGCTATGTTTTCTTGT 59.800 47.619 10.99 0.00 0.00 3.16
364 365 1.791555 CGGCAGCGCTATGTTTTCTTG 60.792 52.381 10.99 0.00 0.00 3.02
365 366 0.447801 CGGCAGCGCTATGTTTTCTT 59.552 50.000 10.99 0.00 0.00 2.52
366 367 1.982073 GCGGCAGCGCTATGTTTTCT 61.982 55.000 10.99 0.00 0.00 2.52
367 368 1.583709 GCGGCAGCGCTATGTTTTC 60.584 57.895 10.99 0.00 0.00 2.29
368 369 2.485122 GCGGCAGCGCTATGTTTT 59.515 55.556 10.99 0.00 0.00 2.43
369 370 3.508840 GGCGGCAGCGCTATGTTT 61.509 61.111 10.99 0.00 46.35 2.83
378 379 1.344942 CTATATCGTTCGGCGGCAGC 61.345 60.000 10.53 0.00 41.72 5.25
379 380 0.732880 CCTATATCGTTCGGCGGCAG 60.733 60.000 10.53 0.00 41.72 4.85
380 381 1.174078 TCCTATATCGTTCGGCGGCA 61.174 55.000 10.53 0.00 41.72 5.69
381 382 0.172803 ATCCTATATCGTTCGGCGGC 59.827 55.000 7.21 0.00 41.72 6.53
382 383 2.094906 TGAATCCTATATCGTTCGGCGG 60.095 50.000 7.21 0.00 41.72 6.13
383 384 2.915463 GTGAATCCTATATCGTTCGGCG 59.085 50.000 0.00 0.00 43.01 6.46
384 385 3.056749 AGGTGAATCCTATATCGTTCGGC 60.057 47.826 0.00 0.00 46.10 5.54
385 386 4.785511 AGGTGAATCCTATATCGTTCGG 57.214 45.455 0.00 0.00 46.10 4.30
396 397 9.340996 CGTCTTGGAACGATATAGGTGAATCCT 62.341 44.444 0.00 0.00 46.20 3.24
397 398 5.927115 GTCTTGGAACGATATAGGTGAATCC 59.073 44.000 0.00 0.00 0.00 3.01
398 399 5.629849 CGTCTTGGAACGATATAGGTGAATC 59.370 44.000 0.00 0.00 45.37 2.52
399 400 5.529791 CGTCTTGGAACGATATAGGTGAAT 58.470 41.667 0.00 0.00 45.37 2.57
400 401 4.735578 GCGTCTTGGAACGATATAGGTGAA 60.736 45.833 0.00 0.00 45.37 3.18
401 402 3.243301 GCGTCTTGGAACGATATAGGTGA 60.243 47.826 0.00 0.00 45.37 4.02
402 403 3.050619 GCGTCTTGGAACGATATAGGTG 58.949 50.000 0.00 0.00 45.37 4.00
403 404 2.287427 CGCGTCTTGGAACGATATAGGT 60.287 50.000 0.00 0.00 45.37 3.08
404 405 2.316792 CGCGTCTTGGAACGATATAGG 58.683 52.381 0.00 0.00 45.37 2.57
405 406 1.714460 GCGCGTCTTGGAACGATATAG 59.286 52.381 8.43 0.00 45.37 1.31
406 407 1.065851 TGCGCGTCTTGGAACGATATA 59.934 47.619 8.43 0.00 45.37 0.86
407 408 0.179121 TGCGCGTCTTGGAACGATAT 60.179 50.000 8.43 0.00 45.37 1.63
408 409 0.388778 TTGCGCGTCTTGGAACGATA 60.389 50.000 8.43 0.00 45.37 2.92
409 410 1.225376 TTTGCGCGTCTTGGAACGAT 61.225 50.000 8.43 0.00 45.37 3.73
410 411 1.883544 TTTGCGCGTCTTGGAACGA 60.884 52.632 8.43 0.00 45.37 3.85
411 412 1.721133 GTTTGCGCGTCTTGGAACG 60.721 57.895 8.43 0.00 45.31 3.95
412 413 0.040425 ATGTTTGCGCGTCTTGGAAC 60.040 50.000 8.43 4.85 0.00 3.62
413 414 0.237235 GATGTTTGCGCGTCTTGGAA 59.763 50.000 8.43 0.00 0.00 3.53
414 415 0.882484 TGATGTTTGCGCGTCTTGGA 60.882 50.000 8.43 0.00 0.00 3.53
415 416 0.725784 GTGATGTTTGCGCGTCTTGG 60.726 55.000 8.43 0.00 0.00 3.61
416 417 1.054348 CGTGATGTTTGCGCGTCTTG 61.054 55.000 8.43 0.00 34.81 3.02
417 418 1.204062 CGTGATGTTTGCGCGTCTT 59.796 52.632 8.43 0.00 34.81 3.01
418 419 1.663388 TCGTGATGTTTGCGCGTCT 60.663 52.632 8.43 0.00 39.95 4.18
419 420 1.507096 GTCGTGATGTTTGCGCGTC 60.507 57.895 8.43 0.00 39.95 5.19
420 421 2.549282 GTCGTGATGTTTGCGCGT 59.451 55.556 8.43 0.00 39.95 6.01
421 422 2.568029 CGTCGTGATGTTTGCGCG 60.568 61.111 0.00 0.00 40.33 6.86
422 423 1.507096 GACGTCGTGATGTTTGCGC 60.507 57.895 0.63 0.00 0.00 6.09
423 424 1.333115 TAGACGTCGTGATGTTTGCG 58.667 50.000 10.46 0.00 0.00 4.85
424 425 2.029244 CCATAGACGTCGTGATGTTTGC 59.971 50.000 20.81 0.00 0.00 3.68
425 426 3.250744 ACCATAGACGTCGTGATGTTTG 58.749 45.455 20.81 11.29 0.00 2.93
426 427 3.587797 ACCATAGACGTCGTGATGTTT 57.412 42.857 20.81 8.75 0.00 2.83
427 428 4.707030 TTACCATAGACGTCGTGATGTT 57.293 40.909 20.81 12.48 0.00 2.71
428 429 4.707030 TTTACCATAGACGTCGTGATGT 57.293 40.909 20.81 14.65 0.00 3.06
429 430 4.503007 CCTTTTACCATAGACGTCGTGATG 59.497 45.833 20.81 18.60 0.00 3.07
430 431 4.400251 TCCTTTTACCATAGACGTCGTGAT 59.600 41.667 20.81 10.12 0.00 3.06
431 432 3.758023 TCCTTTTACCATAGACGTCGTGA 59.242 43.478 20.81 7.76 0.00 4.35
432 433 3.855950 GTCCTTTTACCATAGACGTCGTG 59.144 47.826 10.46 12.96 0.00 4.35
433 434 3.119352 GGTCCTTTTACCATAGACGTCGT 60.119 47.826 10.46 0.00 39.50 4.34
434 435 3.119388 TGGTCCTTTTACCATAGACGTCG 60.119 47.826 10.46 0.00 44.68 5.12
435 436 4.460948 TGGTCCTTTTACCATAGACGTC 57.539 45.455 7.70 7.70 44.68 4.34
444 445 3.082548 GCTCTCCTTTGGTCCTTTTACC 58.917 50.000 0.00 0.00 40.19 2.85
445 446 3.082548 GGCTCTCCTTTGGTCCTTTTAC 58.917 50.000 0.00 0.00 0.00 2.01
446 447 2.714250 TGGCTCTCCTTTGGTCCTTTTA 59.286 45.455 0.00 0.00 0.00 1.52
447 448 1.499007 TGGCTCTCCTTTGGTCCTTTT 59.501 47.619 0.00 0.00 0.00 2.27
453 454 2.032681 GCGTGGCTCTCCTTTGGT 59.967 61.111 0.00 0.00 0.00 3.67
455 456 3.121030 CGGCGTGGCTCTCCTTTG 61.121 66.667 0.00 0.00 0.00 2.77
462 463 2.506438 GTCTACACGGCGTGGCTC 60.506 66.667 39.03 23.43 37.94 4.70
467 468 1.588824 TTCCGATGTCTACACGGCGT 61.589 55.000 6.77 6.77 45.25 5.68
468 469 0.457166 TTTCCGATGTCTACACGGCG 60.457 55.000 4.80 4.80 45.25 6.46
469 470 1.659098 CTTTTCCGATGTCTACACGGC 59.341 52.381 15.00 0.00 45.25 5.68
470 471 2.094390 TCCTTTTCCGATGTCTACACGG 60.094 50.000 14.14 14.14 46.71 4.94
472 473 3.683340 GGTTCCTTTTCCGATGTCTACAC 59.317 47.826 0.00 0.00 0.00 2.90
473 474 3.307199 GGGTTCCTTTTCCGATGTCTACA 60.307 47.826 0.00 0.00 0.00 2.74
474 475 3.055312 AGGGTTCCTTTTCCGATGTCTAC 60.055 47.826 0.00 0.00 0.00 2.59
475 476 3.178865 AGGGTTCCTTTTCCGATGTCTA 58.821 45.455 0.00 0.00 0.00 2.59
476 477 1.985895 AGGGTTCCTTTTCCGATGTCT 59.014 47.619 0.00 0.00 0.00 3.41
477 478 2.491675 AGGGTTCCTTTTCCGATGTC 57.508 50.000 0.00 0.00 0.00 3.06
478 479 2.971901 AAGGGTTCCTTTTCCGATGT 57.028 45.000 0.00 0.00 41.69 3.06
503 513 2.867647 GCAATGGAGTGGCTTTTGGTTC 60.868 50.000 0.00 0.00 0.00 3.62
505 515 0.681175 GCAATGGAGTGGCTTTTGGT 59.319 50.000 0.00 0.00 0.00 3.67
507 517 1.010419 GCGCAATGGAGTGGCTTTTG 61.010 55.000 0.30 0.00 0.00 2.44
508 518 1.290009 GCGCAATGGAGTGGCTTTT 59.710 52.632 0.30 0.00 0.00 2.27
567 581 0.250166 ACCTTTTCTTCCACCGGTCG 60.250 55.000 2.59 0.00 0.00 4.79
568 582 1.235724 CACCTTTTCTTCCACCGGTC 58.764 55.000 2.59 0.00 0.00 4.79
569 583 0.179001 CCACCTTTTCTTCCACCGGT 60.179 55.000 0.00 0.00 0.00 5.28
570 584 0.179001 ACCACCTTTTCTTCCACCGG 60.179 55.000 0.00 0.00 0.00 5.28
571 585 2.148768 GTACCACCTTTTCTTCCACCG 58.851 52.381 0.00 0.00 0.00 4.94
578 592 2.922740 TTGCTCGTACCACCTTTTCT 57.077 45.000 0.00 0.00 0.00 2.52
586 600 1.216977 CCCGTCATTGCTCGTACCA 59.783 57.895 0.00 0.00 0.00 3.25
587 601 2.171725 GCCCGTCATTGCTCGTACC 61.172 63.158 0.00 0.00 0.00 3.34
589 603 1.141019 GAGCCCGTCATTGCTCGTA 59.859 57.895 0.00 0.00 43.94 3.43
590 604 2.125512 GAGCCCGTCATTGCTCGT 60.126 61.111 0.00 0.00 43.94 4.18
593 607 2.045926 GGTGAGCCCGTCATTGCT 60.046 61.111 0.00 0.00 41.42 3.91
605 622 4.091945 CGTGTCATGTCATGTAAAGGTGAG 59.908 45.833 12.54 0.00 0.00 3.51
676 764 2.396157 CGGTAAGTTTCTGCCCGCC 61.396 63.158 0.00 0.00 0.00 6.13
747 847 0.250513 AGGTAGAAGGCAAGCGGAAG 59.749 55.000 0.00 0.00 0.00 3.46
748 848 0.249398 GAGGTAGAAGGCAAGCGGAA 59.751 55.000 0.00 0.00 0.00 4.30
749 849 1.614241 GGAGGTAGAAGGCAAGCGGA 61.614 60.000 0.00 0.00 0.00 5.54
859 962 2.496817 CGGGCGAGGGAAGAGAAG 59.503 66.667 0.00 0.00 0.00 2.85
951 1072 2.290122 CTGTGGCTCTCCGCGAGATT 62.290 60.000 8.23 0.00 45.79 2.40
952 1073 2.755876 TGTGGCTCTCCGCGAGAT 60.756 61.111 8.23 0.00 45.79 2.75
954 1075 3.408501 CTCTGTGGCTCTCCGCGAG 62.409 68.421 8.23 3.02 45.79 5.03
955 1076 3.443925 CTCTGTGGCTCTCCGCGA 61.444 66.667 8.23 0.00 45.79 5.87
1159 1280 2.682352 GCAGAGAAGGGCAGAAGAAATC 59.318 50.000 0.00 0.00 0.00 2.17
1186 1316 2.229792 GATTCAGCACCAGACCAAACA 58.770 47.619 0.00 0.00 0.00 2.83
1187 1317 1.197721 CGATTCAGCACCAGACCAAAC 59.802 52.381 0.00 0.00 0.00 2.93
1200 1330 0.919981 GTCGAGAAGCAGCGATTCAG 59.080 55.000 8.73 3.62 38.91 3.02
1201 1331 0.243636 TGTCGAGAAGCAGCGATTCA 59.756 50.000 8.73 0.00 38.91 2.57
1202 1332 0.919981 CTGTCGAGAAGCAGCGATTC 59.080 55.000 0.00 0.00 38.91 2.52
1203 1333 0.459237 CCTGTCGAGAAGCAGCGATT 60.459 55.000 0.00 0.00 38.91 3.34
1206 1336 2.091112 CACCTGTCGAGAAGCAGCG 61.091 63.158 0.00 0.00 0.00 5.18
1207 1337 1.005630 ACACCTGTCGAGAAGCAGC 60.006 57.895 0.00 0.00 0.00 5.25
1208 1338 1.287730 GCACACCTGTCGAGAAGCAG 61.288 60.000 0.00 0.00 0.00 4.24
1211 1341 0.032678 ACTGCACACCTGTCGAGAAG 59.967 55.000 0.00 0.00 0.00 2.85
1212 1342 0.032130 GACTGCACACCTGTCGAGAA 59.968 55.000 0.00 0.00 33.58 2.87
1213 1343 1.660355 GACTGCACACCTGTCGAGA 59.340 57.895 0.00 0.00 33.58 4.04
1214 1344 4.251760 GACTGCACACCTGTCGAG 57.748 61.111 0.00 0.00 33.58 4.04
1217 1347 1.956170 CACCGACTGCACACCTGTC 60.956 63.158 0.00 0.00 38.58 3.51
1218 1348 2.108976 CACCGACTGCACACCTGT 59.891 61.111 0.00 0.00 0.00 4.00
1640 1819 2.861462 AGAGAAATCGAAGCGGAGAG 57.139 50.000 0.00 0.00 0.00 3.20
1656 1835 0.734253 CGTGGTCTCCTGCGAAAGAG 60.734 60.000 0.00 0.00 0.00 2.85
1657 1836 1.289066 CGTGGTCTCCTGCGAAAGA 59.711 57.895 0.00 0.00 0.00 2.52
1744 1923 1.202405 CCGAGCAAAACAGCACCTTTT 60.202 47.619 0.00 0.00 36.85 2.27
1753 1932 4.133820 TCAAGAAGAATCCGAGCAAAACA 58.866 39.130 0.00 0.00 0.00 2.83
1762 1941 8.457261 AGAAATCAAAGAATCAAGAAGAATCCG 58.543 33.333 0.00 0.00 0.00 4.18
1781 1960 3.501062 CAGCAGAACAAGCAGAGAAATCA 59.499 43.478 0.00 0.00 0.00 2.57
1784 1963 2.923121 ACAGCAGAACAAGCAGAGAAA 58.077 42.857 0.00 0.00 0.00 2.52
1788 1967 5.772825 AAATTAACAGCAGAACAAGCAGA 57.227 34.783 0.00 0.00 0.00 4.26
1790 1969 5.519566 CACAAAATTAACAGCAGAACAAGCA 59.480 36.000 0.00 0.00 0.00 3.91
1792 1971 6.974622 AGACACAAAATTAACAGCAGAACAAG 59.025 34.615 0.00 0.00 0.00 3.16
1837 2016 3.821600 GGAGTAGACAAGACACACAGAGA 59.178 47.826 0.00 0.00 0.00 3.10
1838 2017 3.570125 TGGAGTAGACAAGACACACAGAG 59.430 47.826 0.00 0.00 0.00 3.35
1855 2034 1.136329 ACATGCTTGACCCCTGGAGT 61.136 55.000 6.60 0.00 0.00 3.85
1856 2035 0.679002 CACATGCTTGACCCCTGGAG 60.679 60.000 6.60 0.00 0.00 3.86
1905 2084 2.034066 ATGGTGCCCGTGACCTTG 59.966 61.111 0.00 0.00 34.26 3.61
1950 2129 2.095252 GCGGTTGAGCTTCTCGGTC 61.095 63.158 0.00 0.00 40.53 4.79
1953 2132 3.843240 GCGCGGTTGAGCTTCTCG 61.843 66.667 8.83 0.00 37.97 4.04
2048 2227 4.233789 CTCTTTGTCTGTCTTCTTCTCGG 58.766 47.826 0.00 0.00 0.00 4.63
2060 2239 3.121030 CGCCCGCCTCTTTGTCTG 61.121 66.667 0.00 0.00 0.00 3.51
2309 2488 2.889018 GTTGGTAGTAGCCGCCGC 60.889 66.667 0.00 0.00 0.00 6.53
2310 2489 1.079681 TTGTTGGTAGTAGCCGCCG 60.080 57.895 0.00 0.00 0.00 6.46
2311 2490 0.320946 TGTTGTTGGTAGTAGCCGCC 60.321 55.000 0.00 0.00 0.00 6.13
2312 2491 1.076332 CTGTTGTTGGTAGTAGCCGC 58.924 55.000 0.00 0.00 0.00 6.53
2313 2492 1.076332 GCTGTTGTTGGTAGTAGCCG 58.924 55.000 0.00 0.00 0.00 5.52
2427 2612 4.340246 CTGGGGTGCTGCTGCTGA 62.340 66.667 17.00 0.00 40.48 4.26
2649 2843 4.190001 AGTATGTCAGCATTGCTCTTCTG 58.810 43.478 8.54 0.00 36.40 3.02
2670 2866 0.027455 CTCTCGTCGCTGTCTGCTAG 59.973 60.000 0.00 0.00 40.11 3.42
2711 2907 2.493278 TCCGGTCCGAGTAAAAACTAGG 59.507 50.000 14.39 0.00 34.39 3.02
2717 2913 1.186917 TGCCTCCGGTCCGAGTAAAA 61.187 55.000 14.39 0.00 0.00 1.52
2718 2914 0.974010 ATGCCTCCGGTCCGAGTAAA 60.974 55.000 14.39 0.00 0.00 2.01
2719 2915 1.380785 ATGCCTCCGGTCCGAGTAA 60.381 57.895 14.39 0.00 0.00 2.24
2728 2924 2.746359 GAGGATGGATGCCTCCGG 59.254 66.667 3.39 0.00 44.96 5.14
2740 2936 1.048601 ACGCATCGGTTATGGAGGAT 58.951 50.000 0.00 0.00 35.99 3.24
2744 2940 1.522806 GGCACGCATCGGTTATGGA 60.523 57.895 0.00 0.00 35.99 3.41
2745 2941 1.498865 GAGGCACGCATCGGTTATGG 61.499 60.000 0.00 0.00 35.99 2.74
2747 2943 1.227556 GGAGGCACGCATCGGTTAT 60.228 57.895 0.00 0.00 0.00 1.89
2748 2944 2.185867 GGAGGCACGCATCGGTTA 59.814 61.111 0.00 0.00 0.00 2.85
2789 2987 4.201679 ATCGGACGCGCGATGGAA 62.202 61.111 39.36 17.58 0.00 3.53
2793 2991 4.925576 GACCATCGGACGCGCGAT 62.926 66.667 39.36 21.24 0.00 4.58
2796 2994 4.925576 ATCGACCATCGGACGCGC 62.926 66.667 5.73 0.00 40.30 6.86
2800 2998 2.194271 GAACAAGATCGACCATCGGAC 58.806 52.381 0.00 0.00 40.88 4.79
2801 2999 1.136305 GGAACAAGATCGACCATCGGA 59.864 52.381 0.00 0.00 40.88 4.55
2802 3000 1.137086 AGGAACAAGATCGACCATCGG 59.863 52.381 0.00 0.00 40.88 4.18
2804 3002 1.936547 GCAGGAACAAGATCGACCATC 59.063 52.381 0.00 0.00 0.00 3.51
2805 3003 1.407437 GGCAGGAACAAGATCGACCAT 60.407 52.381 0.00 0.00 0.00 3.55
2808 3006 1.079503 GTGGCAGGAACAAGATCGAC 58.920 55.000 0.00 0.00 0.00 4.20
2809 3007 0.389817 CGTGGCAGGAACAAGATCGA 60.390 55.000 0.00 0.00 0.00 3.59
2811 3009 1.363744 CTCGTGGCAGGAACAAGATC 58.636 55.000 11.43 0.00 0.00 2.75
2812 3010 0.674895 GCTCGTGGCAGGAACAAGAT 60.675 55.000 11.43 0.00 41.35 2.40
2813 3011 1.301716 GCTCGTGGCAGGAACAAGA 60.302 57.895 11.43 0.00 41.35 3.02
2814 3012 1.294659 GAGCTCGTGGCAGGAACAAG 61.295 60.000 11.43 0.74 44.79 3.16
2816 3014 2.343758 GAGCTCGTGGCAGGAACA 59.656 61.111 11.43 0.00 44.79 3.18
2859 3069 0.830023 TTTAGCCAAACCACTGGGGC 60.830 55.000 0.00 5.84 46.77 5.80
2871 3081 9.281371 CATCTCATTCATCTCTTAATTTAGCCA 57.719 33.333 0.00 0.00 0.00 4.75
2947 3158 2.480555 CACGATTCAACGCCAGCC 59.519 61.111 0.00 0.00 36.70 4.85
2948 3159 2.032634 TCCACGATTCAACGCCAGC 61.033 57.895 0.00 0.00 36.70 4.85
2949 3160 1.635663 GGTCCACGATTCAACGCCAG 61.636 60.000 0.00 0.00 36.70 4.85
2950 3161 1.669760 GGTCCACGATTCAACGCCA 60.670 57.895 0.00 0.00 36.70 5.69
2972 3183 2.745102 GACCGAGGCTAGATTAAGCAC 58.255 52.381 0.00 0.00 44.64 4.40
2999 3211 1.010574 CTCTCGGATCGACGACAGC 60.011 63.158 0.00 0.00 38.06 4.40
3011 3223 2.921538 GATCACCACGTCGCTCTCGG 62.922 65.000 0.00 0.00 36.13 4.63
3012 3224 1.583967 GATCACCACGTCGCTCTCG 60.584 63.158 0.00 0.00 0.00 4.04
3036 3248 2.205074 CTCTTCAATTGTCCCGATCGG 58.795 52.381 27.65 27.65 0.00 4.18
3043 3255 0.721718 CGTCGCCTCTTCAATTGTCC 59.278 55.000 5.13 0.00 0.00 4.02
3054 3266 1.369625 AATGTGGAAATCGTCGCCTC 58.630 50.000 0.00 0.00 0.00 4.70
3055 3267 2.684001 TAATGTGGAAATCGTCGCCT 57.316 45.000 0.00 0.00 0.00 5.52
3061 3273 4.857871 TCGCTTCTTAATGTGGAAATCG 57.142 40.909 0.00 0.00 0.00 3.34
3087 3299 2.789491 CGAGGATTAACTCCCCGTAC 57.211 55.000 0.00 0.00 46.27 3.67
3094 3306 4.571176 GGTCCAATGAACGAGGATTAACTC 59.429 45.833 0.00 0.00 33.33 3.01
3153 3365 4.256110 CCAGCCTCCAAAATCCAAAATTC 58.744 43.478 0.00 0.00 0.00 2.17
3158 3370 0.904394 GGCCAGCCTCCAAAATCCAA 60.904 55.000 0.00 0.00 0.00 3.53
3160 3372 2.418083 CGGCCAGCCTCCAAAATCC 61.418 63.158 2.24 0.00 0.00 3.01
3162 3374 3.070576 GCGGCCAGCCTCCAAAAT 61.071 61.111 2.24 0.00 40.81 1.82
3172 3384 1.903404 AAAGGTTCAAGGCGGCCAG 60.903 57.895 23.09 13.50 0.00 4.85
3173 3385 2.197324 AAAGGTTCAAGGCGGCCA 59.803 55.556 23.09 0.00 0.00 5.36
3174 3386 1.250840 ATCAAAGGTTCAAGGCGGCC 61.251 55.000 12.11 12.11 0.00 6.13
3175 3387 0.109132 CATCAAAGGTTCAAGGCGGC 60.109 55.000 0.00 0.00 0.00 6.53
3176 3388 0.527565 CCATCAAAGGTTCAAGGCGG 59.472 55.000 0.00 0.00 0.00 6.13
3177 3389 1.247567 ACCATCAAAGGTTCAAGGCG 58.752 50.000 0.00 0.00 39.34 5.52
3178 3390 2.164422 GCTACCATCAAAGGTTCAAGGC 59.836 50.000 0.00 0.00 43.08 4.35
3179 3391 2.420022 CGCTACCATCAAAGGTTCAAGG 59.580 50.000 0.00 0.00 43.08 3.61
3180 3392 3.334691 TCGCTACCATCAAAGGTTCAAG 58.665 45.455 0.00 0.00 43.08 3.02
3181 3393 3.410631 TCGCTACCATCAAAGGTTCAA 57.589 42.857 0.00 0.00 43.08 2.69
3182 3394 3.334691 CTTCGCTACCATCAAAGGTTCA 58.665 45.455 0.00 0.00 43.08 3.18
3183 3395 2.678336 CCTTCGCTACCATCAAAGGTTC 59.322 50.000 0.00 0.00 43.08 3.62
3184 3396 2.304761 TCCTTCGCTACCATCAAAGGTT 59.695 45.455 0.00 0.00 43.08 3.50
3185 3397 1.906574 TCCTTCGCTACCATCAAAGGT 59.093 47.619 0.00 0.00 45.72 3.50
3186 3398 2.691409 TCCTTCGCTACCATCAAAGG 57.309 50.000 0.00 0.00 38.26 3.11
3187 3399 3.806521 CAGATCCTTCGCTACCATCAAAG 59.193 47.826 0.00 0.00 0.00 2.77
3188 3400 3.450817 TCAGATCCTTCGCTACCATCAAA 59.549 43.478 0.00 0.00 0.00 2.69
3198 3410 1.071385 ACCATCCATCAGATCCTTCGC 59.929 52.381 0.00 0.00 30.59 4.70
3293 3505 4.528596 TCAGGTGGTCTTTTTGGACAAAAA 59.471 37.500 18.58 18.58 44.98 1.94
3294 3506 4.081917 GTCAGGTGGTCTTTTTGGACAAAA 60.082 41.667 6.14 6.14 38.40 2.44
3295 3507 3.445805 GTCAGGTGGTCTTTTTGGACAAA 59.554 43.478 0.00 0.00 37.91 2.83
3296 3508 3.020984 GTCAGGTGGTCTTTTTGGACAA 58.979 45.455 0.00 0.00 37.91 3.18
3297 3509 2.650322 GTCAGGTGGTCTTTTTGGACA 58.350 47.619 0.00 0.00 37.91 4.02
3298 3510 1.602377 CGTCAGGTGGTCTTTTTGGAC 59.398 52.381 0.00 0.00 35.66 4.02
3299 3511 1.487142 TCGTCAGGTGGTCTTTTTGGA 59.513 47.619 0.00 0.00 0.00 3.53
3300 3512 1.961793 TCGTCAGGTGGTCTTTTTGG 58.038 50.000 0.00 0.00 0.00 3.28
3301 3513 3.363970 CGATTCGTCAGGTGGTCTTTTTG 60.364 47.826 0.00 0.00 0.00 2.44
3302 3514 2.806244 CGATTCGTCAGGTGGTCTTTTT 59.194 45.455 0.00 0.00 0.00 1.94
3303 3515 2.036733 TCGATTCGTCAGGTGGTCTTTT 59.963 45.455 5.89 0.00 0.00 2.27
3304 3516 1.616865 TCGATTCGTCAGGTGGTCTTT 59.383 47.619 5.89 0.00 0.00 2.52
3305 3517 1.254026 TCGATTCGTCAGGTGGTCTT 58.746 50.000 5.89 0.00 0.00 3.01
3306 3518 1.254026 TTCGATTCGTCAGGTGGTCT 58.746 50.000 5.89 0.00 0.00 3.85
3307 3519 2.295253 ATTCGATTCGTCAGGTGGTC 57.705 50.000 5.89 0.00 0.00 4.02
3308 3520 2.346803 CAATTCGATTCGTCAGGTGGT 58.653 47.619 5.89 0.00 0.00 4.16
3309 3521 1.062587 GCAATTCGATTCGTCAGGTGG 59.937 52.381 5.89 0.00 0.00 4.61
3310 3522 2.002586 AGCAATTCGATTCGTCAGGTG 58.997 47.619 5.89 0.66 0.00 4.00
3311 3523 2.386661 AGCAATTCGATTCGTCAGGT 57.613 45.000 5.89 0.00 0.00 4.00
3312 3524 3.706698 TCTAGCAATTCGATTCGTCAGG 58.293 45.455 5.89 0.00 0.00 3.86
3313 3525 5.702622 TTTCTAGCAATTCGATTCGTCAG 57.297 39.130 5.89 0.00 0.00 3.51
3314 3526 5.867174 TCTTTTCTAGCAATTCGATTCGTCA 59.133 36.000 5.89 0.00 0.00 4.35
3315 3527 6.179193 GTCTTTTCTAGCAATTCGATTCGTC 58.821 40.000 5.89 0.00 0.00 4.20
3316 3528 5.063564 GGTCTTTTCTAGCAATTCGATTCGT 59.936 40.000 5.89 0.00 0.00 3.85
3317 3529 5.493735 GGTCTTTTCTAGCAATTCGATTCG 58.506 41.667 0.00 0.00 0.00 3.34
3318 3530 5.586643 AGGGTCTTTTCTAGCAATTCGATTC 59.413 40.000 0.00 0.00 0.00 2.52
3319 3531 5.501156 AGGGTCTTTTCTAGCAATTCGATT 58.499 37.500 0.00 0.00 0.00 3.34
3320 3532 5.104259 AGGGTCTTTTCTAGCAATTCGAT 57.896 39.130 0.00 0.00 0.00 3.59
3321 3533 4.553330 AGGGTCTTTTCTAGCAATTCGA 57.447 40.909 0.00 0.00 0.00 3.71
3322 3534 5.420409 AGTAGGGTCTTTTCTAGCAATTCG 58.580 41.667 0.00 0.00 0.00 3.34
3323 3535 8.788325 TTTAGTAGGGTCTTTTCTAGCAATTC 57.212 34.615 0.00 0.00 0.00 2.17
3324 3536 9.011095 GTTTTAGTAGGGTCTTTTCTAGCAATT 57.989 33.333 0.00 0.00 0.00 2.32
3325 3537 8.161425 TGTTTTAGTAGGGTCTTTTCTAGCAAT 58.839 33.333 0.00 0.00 0.00 3.56
3326 3538 7.511268 TGTTTTAGTAGGGTCTTTTCTAGCAA 58.489 34.615 0.00 0.00 0.00 3.91
3327 3539 7.069877 TGTTTTAGTAGGGTCTTTTCTAGCA 57.930 36.000 0.00 0.00 0.00 3.49
3328 3540 7.974482 TTGTTTTAGTAGGGTCTTTTCTAGC 57.026 36.000 0.00 0.00 0.00 3.42
3331 3543 9.416284 TCAATTTGTTTTAGTAGGGTCTTTTCT 57.584 29.630 0.00 0.00 0.00 2.52
3332 3544 9.459640 GTCAATTTGTTTTAGTAGGGTCTTTTC 57.540 33.333 0.00 0.00 0.00 2.29
3333 3545 8.973182 TGTCAATTTGTTTTAGTAGGGTCTTTT 58.027 29.630 0.00 0.00 0.00 2.27
3334 3546 8.528044 TGTCAATTTGTTTTAGTAGGGTCTTT 57.472 30.769 0.00 0.00 0.00 2.52
3335 3547 8.528044 TTGTCAATTTGTTTTAGTAGGGTCTT 57.472 30.769 0.00 0.00 0.00 3.01
3336 3548 8.528044 TTTGTCAATTTGTTTTAGTAGGGTCT 57.472 30.769 0.00 0.00 0.00 3.85
3337 3549 9.589111 TTTTTGTCAATTTGTTTTAGTAGGGTC 57.411 29.630 0.00 0.00 0.00 4.46
3360 3572 1.676006 CACGGTTCAGCTGGTCTTTTT 59.324 47.619 15.13 0.00 0.00 1.94
3361 3573 1.308998 CACGGTTCAGCTGGTCTTTT 58.691 50.000 15.13 0.00 0.00 2.27
3362 3574 0.535102 CCACGGTTCAGCTGGTCTTT 60.535 55.000 15.13 0.00 0.00 2.52
3363 3575 1.071471 CCACGGTTCAGCTGGTCTT 59.929 57.895 15.13 0.00 0.00 3.01
3364 3576 2.743718 CCACGGTTCAGCTGGTCT 59.256 61.111 15.13 0.00 0.00 3.85
3365 3577 3.050275 GCCACGGTTCAGCTGGTC 61.050 66.667 15.13 7.19 0.00 4.02
3366 3578 4.988598 CGCCACGGTTCAGCTGGT 62.989 66.667 15.13 0.00 0.00 4.00
3397 3609 3.434319 GCAGGTGCCACATGTCGG 61.434 66.667 11.50 2.40 31.66 4.79
3411 3623 2.433838 CTGCTCCTGTGACGGCAG 60.434 66.667 0.00 0.00 44.45 4.85
3412 3624 4.007644 CCTGCTCCTGTGACGGCA 62.008 66.667 0.00 0.00 0.00 5.69
3414 3626 3.947132 CTGCCTGCTCCTGTGACGG 62.947 68.421 0.00 0.00 0.00 4.79
3415 3627 2.433838 CTGCCTGCTCCTGTGACG 60.434 66.667 0.00 0.00 0.00 4.35
3416 3628 2.745492 GCTGCCTGCTCCTGTGAC 60.745 66.667 0.00 0.00 38.95 3.67
3426 3638 1.676678 TAAGCCCGAGTAGCTGCCTG 61.677 60.000 0.00 0.00 40.49 4.85
3427 3639 0.976073 TTAAGCCCGAGTAGCTGCCT 60.976 55.000 0.00 0.00 40.49 4.75
3428 3640 0.810426 GTTAAGCCCGAGTAGCTGCC 60.810 60.000 0.00 0.00 40.49 4.85
3429 3641 0.108329 TGTTAAGCCCGAGTAGCTGC 60.108 55.000 0.00 0.00 40.49 5.25
3430 3642 1.471676 CCTGTTAAGCCCGAGTAGCTG 60.472 57.143 0.00 0.00 40.49 4.24
3431 3643 0.824759 CCTGTTAAGCCCGAGTAGCT 59.175 55.000 0.00 0.00 44.19 3.32
3432 3644 0.535797 ACCTGTTAAGCCCGAGTAGC 59.464 55.000 0.00 0.00 0.00 3.58
3433 3645 3.329929 AAACCTGTTAAGCCCGAGTAG 57.670 47.619 0.00 0.00 0.00 2.57
3434 3646 5.422145 GAATAAACCTGTTAAGCCCGAGTA 58.578 41.667 0.00 0.00 0.00 2.59
3435 3647 3.994931 ATAAACCTGTTAAGCCCGAGT 57.005 42.857 0.00 0.00 0.00 4.18
3436 3648 3.308866 CGAATAAACCTGTTAAGCCCGAG 59.691 47.826 0.00 0.00 0.00 4.63
3437 3649 3.264104 CGAATAAACCTGTTAAGCCCGA 58.736 45.455 0.00 0.00 0.00 5.14
3438 3650 3.004862 ACGAATAAACCTGTTAAGCCCG 58.995 45.455 0.00 0.00 0.00 6.13
3439 3651 3.376234 GGACGAATAAACCTGTTAAGCCC 59.624 47.826 0.00 0.00 0.00 5.19
3440 3652 3.063045 CGGACGAATAAACCTGTTAAGCC 59.937 47.826 0.00 0.00 0.00 4.35
3441 3653 3.063045 CCGGACGAATAAACCTGTTAAGC 59.937 47.826 0.00 0.00 0.00 3.09
3442 3654 4.497300 TCCGGACGAATAAACCTGTTAAG 58.503 43.478 0.00 0.00 0.00 1.85
3443 3655 4.533919 TCCGGACGAATAAACCTGTTAA 57.466 40.909 0.00 0.00 0.00 2.01
3444 3656 4.533919 TTCCGGACGAATAAACCTGTTA 57.466 40.909 1.83 0.00 0.00 2.41
3445 3657 3.405823 TTCCGGACGAATAAACCTGTT 57.594 42.857 1.83 0.00 0.00 3.16
3446 3658 3.244318 ACTTTCCGGACGAATAAACCTGT 60.244 43.478 1.83 0.00 0.00 4.00
3447 3659 3.332034 ACTTTCCGGACGAATAAACCTG 58.668 45.455 1.83 0.00 0.00 4.00
3448 3660 3.690475 ACTTTCCGGACGAATAAACCT 57.310 42.857 1.83 0.00 0.00 3.50
3449 3661 3.308053 GCTACTTTCCGGACGAATAAACC 59.692 47.826 1.83 0.00 0.00 3.27
3450 3662 4.032558 CAGCTACTTTCCGGACGAATAAAC 59.967 45.833 1.83 0.00 0.00 2.01
3451 3663 4.178540 CAGCTACTTTCCGGACGAATAAA 58.821 43.478 1.83 0.00 0.00 1.40
3452 3664 3.777478 CAGCTACTTTCCGGACGAATAA 58.223 45.455 1.83 0.00 0.00 1.40
3453 3665 2.480759 GCAGCTACTTTCCGGACGAATA 60.481 50.000 1.83 0.00 0.00 1.75
3454 3666 1.739371 GCAGCTACTTTCCGGACGAAT 60.739 52.381 1.83 0.00 0.00 3.34
3455 3667 0.389426 GCAGCTACTTTCCGGACGAA 60.389 55.000 1.83 0.00 0.00 3.85
3456 3668 1.214589 GCAGCTACTTTCCGGACGA 59.785 57.895 1.83 0.00 0.00 4.20
3457 3669 0.669318 TTGCAGCTACTTTCCGGACG 60.669 55.000 1.83 0.00 0.00 4.79
3458 3670 0.796927 GTTGCAGCTACTTTCCGGAC 59.203 55.000 1.83 0.00 0.00 4.79
3459 3671 0.669318 CGTTGCAGCTACTTTCCGGA 60.669 55.000 0.00 0.00 0.00 5.14
3460 3672 1.635663 CCGTTGCAGCTACTTTCCGG 61.636 60.000 5.42 0.00 0.00 5.14
3461 3673 0.669318 TCCGTTGCAGCTACTTTCCG 60.669 55.000 5.42 0.00 0.00 4.30
3462 3674 1.197036 GTTCCGTTGCAGCTACTTTCC 59.803 52.381 5.42 0.00 0.00 3.13
3463 3675 1.136336 CGTTCCGTTGCAGCTACTTTC 60.136 52.381 5.42 0.00 0.00 2.62
3464 3676 0.865769 CGTTCCGTTGCAGCTACTTT 59.134 50.000 5.42 0.00 0.00 2.66
3465 3677 0.949105 CCGTTCCGTTGCAGCTACTT 60.949 55.000 5.42 0.00 0.00 2.24
3466 3678 1.374252 CCGTTCCGTTGCAGCTACT 60.374 57.895 5.42 0.00 0.00 2.57
3467 3679 0.739813 ATCCGTTCCGTTGCAGCTAC 60.740 55.000 0.00 0.00 0.00 3.58
3468 3680 0.036765 AATCCGTTCCGTTGCAGCTA 60.037 50.000 0.00 0.00 0.00 3.32
3469 3681 1.302511 AATCCGTTCCGTTGCAGCT 60.303 52.632 0.00 0.00 0.00 4.24
3470 3682 1.154225 CAATCCGTTCCGTTGCAGC 60.154 57.895 0.00 0.00 0.00 5.25
3471 3683 0.953471 TCCAATCCGTTCCGTTGCAG 60.953 55.000 0.00 0.00 0.00 4.41
3472 3684 0.953471 CTCCAATCCGTTCCGTTGCA 60.953 55.000 0.00 0.00 0.00 4.08
3473 3685 1.644786 CCTCCAATCCGTTCCGTTGC 61.645 60.000 0.00 0.00 0.00 4.17
3474 3686 1.024579 CCCTCCAATCCGTTCCGTTG 61.025 60.000 0.00 0.00 0.00 4.10
3475 3687 1.298667 CCCTCCAATCCGTTCCGTT 59.701 57.895 0.00 0.00 0.00 4.44
3476 3688 2.666098 CCCCTCCAATCCGTTCCGT 61.666 63.158 0.00 0.00 0.00 4.69
3477 3689 2.189521 CCCCTCCAATCCGTTCCG 59.810 66.667 0.00 0.00 0.00 4.30
3478 3690 1.077716 CACCCCTCCAATCCGTTCC 60.078 63.158 0.00 0.00 0.00 3.62
3479 3691 1.077716 CCACCCCTCCAATCCGTTC 60.078 63.158 0.00 0.00 0.00 3.95
3480 3692 2.612493 CCCACCCCTCCAATCCGTT 61.612 63.158 0.00 0.00 0.00 4.44
3481 3693 3.015145 CCCACCCCTCCAATCCGT 61.015 66.667 0.00 0.00 0.00 4.69
3482 3694 4.506255 GCCCACCCCTCCAATCCG 62.506 72.222 0.00 0.00 0.00 4.18
3483 3695 4.143301 GGCCCACCCCTCCAATCC 62.143 72.222 0.00 0.00 0.00 3.01
3515 3727 2.738521 CGAGTTGGTGCCGTCTGG 60.739 66.667 0.00 0.00 38.77 3.86
3516 3728 3.414700 GCGAGTTGGTGCCGTCTG 61.415 66.667 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.