Multiple sequence alignment - TraesCS4A01G031800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G031800 chr4A 100.000 6040 0 0 1 6040 24769312 24763273 0.000000e+00 11154
1 TraesCS4A01G031800 chr4A 88.273 631 61 10 3770 4398 621565352 621564733 0.000000e+00 743
2 TraesCS4A01G031800 chr4A 83.925 535 66 14 1248 1769 621567451 621566924 1.510000e-135 494
3 TraesCS4A01G031800 chr4A 94.534 311 17 0 551 861 514634711 514634401 1.180000e-131 481
4 TraesCS4A01G031800 chr4A 88.618 246 28 0 1903 2148 621566853 621566608 3.540000e-77 300
5 TraesCS4A01G031800 chr4A 86.911 191 25 0 4863 5053 621564209 621564019 1.320000e-51 215
6 TraesCS4A01G031800 chr4A 79.670 182 23 12 3211 3381 621566021 621565843 1.060000e-22 119
7 TraesCS4A01G031800 chr4D 89.252 2326 125 62 3770 6040 442897594 442899849 0.000000e+00 2795
8 TraesCS4A01G031800 chr4D 92.717 1373 64 16 918 2281 442894819 442896164 0.000000e+00 1949
9 TraesCS4A01G031800 chr4D 89.504 524 51 4 3227 3747 442897078 442897600 0.000000e+00 660
10 TraesCS4A01G031800 chr4D 82.504 663 72 18 2280 2937 442896077 442896700 5.330000e-150 542
11 TraesCS4A01G031800 chr4D 92.045 352 21 4 2937 3286 442896731 442897077 7.040000e-134 488
12 TraesCS4A01G031800 chr4D 83.848 551 44 20 1 543 442894278 442894791 3.270000e-132 483
13 TraesCS4A01G031800 chr4B 94.095 1558 56 19 2208 3747 552015120 552016659 0.000000e+00 2335
14 TraesCS4A01G031800 chr4B 94.506 1256 38 13 918 2165 552013891 552015123 0.000000e+00 1908
15 TraesCS4A01G031800 chr4B 88.506 1566 98 42 4510 6040 552017344 552018862 0.000000e+00 1820
16 TraesCS4A01G031800 chr4B 96.208 712 14 5 3763 4469 552016645 552017348 0.000000e+00 1153
17 TraesCS4A01G031800 chr4B 76.534 554 96 27 2 543 552013331 552013862 7.710000e-69 272
18 TraesCS4A01G031800 chr4B 88.172 93 10 1 2192 2283 552015200 552015292 6.400000e-20 110
19 TraesCS4A01G031800 chr5D 88.088 638 63 10 3770 4398 547608609 547607976 0.000000e+00 745
20 TraesCS4A01G031800 chr5D 84.774 532 62 14 1248 1769 547610661 547610139 3.230000e-142 516
21 TraesCS4A01G031800 chr5D 88.211 246 29 0 1903 2148 547610072 547609827 1.650000e-75 294
22 TraesCS4A01G031800 chr5D 86.911 191 25 0 4863 5053 547607447 547607257 1.320000e-51 215
23 TraesCS4A01G031800 chrUn 87.931 638 64 10 3770 4398 68496518 68495885 0.000000e+00 739
24 TraesCS4A01G031800 chrUn 84.211 532 65 14 1248 1769 68509191 68508669 3.250000e-137 499
25 TraesCS4A01G031800 chrUn 87.805 246 30 0 1903 2148 68508602 68508357 7.660000e-74 289
26 TraesCS4A01G031800 chrUn 86.387 191 26 0 4863 5053 68495356 68495166 6.130000e-50 209
27 TraesCS4A01G031800 chr5B 87.500 632 64 12 3770 4398 690908180 690908799 0.000000e+00 715
28 TraesCS4A01G031800 chr5B 84.952 525 57 14 1248 1761 690906368 690906881 4.180000e-141 512
29 TraesCS4A01G031800 chr5B 93.333 315 19 2 546 859 416592186 416591873 1.190000e-126 464
30 TraesCS4A01G031800 chr5B 84.483 290 43 2 1884 2172 690906924 690907212 9.910000e-73 285
31 TraesCS4A01G031800 chr5B 85.638 188 27 0 4863 5050 690909322 690909509 1.330000e-46 198
32 TraesCS4A01G031800 chr5B 75.909 440 67 26 2975 3383 690907274 690907705 7.990000e-44 189
33 TraesCS4A01G031800 chr6A 94.551 312 17 0 550 861 105585571 105585882 3.270000e-132 483
34 TraesCS4A01G031800 chr6A 93.458 321 21 0 546 866 58765769 58765449 1.520000e-130 477
35 TraesCS4A01G031800 chr6A 92.857 322 21 2 550 869 488058086 488057765 3.300000e-127 466
36 TraesCS4A01G031800 chr1A 93.949 314 19 0 548 861 350489901 350489588 5.480000e-130 475
37 TraesCS4A01G031800 chr1A 93.590 312 20 0 550 861 354954610 354954299 3.300000e-127 466
38 TraesCS4A01G031800 chr5A 93.910 312 19 0 551 862 630124088 630123777 7.090000e-129 472
39 TraesCS4A01G031800 chr2A 92.812 320 23 0 550 869 604748165 604748484 1.190000e-126 464
40 TraesCS4A01G031800 chr7D 92.760 221 14 2 1550 1769 180440130 180440349 9.770000e-83 318
41 TraesCS4A01G031800 chr6D 90.950 221 18 2 1550 1769 150886171 150885952 4.580000e-76 296
42 TraesCS4A01G031800 chr3A 90.950 221 18 2 1550 1769 703853064 703852845 4.580000e-76 296
43 TraesCS4A01G031800 chr7B 94.545 165 7 2 2773 2935 643031433 643031597 2.790000e-63 254
44 TraesCS4A01G031800 chr7B 98.305 59 1 0 2999 3057 643031602 643031660 2.980000e-18 104


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G031800 chr4A 24763273 24769312 6039 True 11154.000000 11154 100.000000 1 6040 1 chr4A.!!$R1 6039
1 TraesCS4A01G031800 chr4A 621564019 621567451 3432 True 374.200000 743 85.479400 1248 5053 5 chr4A.!!$R3 3805
2 TraesCS4A01G031800 chr4D 442894278 442899849 5571 False 1152.833333 2795 88.311667 1 6040 6 chr4D.!!$F1 6039
3 TraesCS4A01G031800 chr4B 552013331 552018862 5531 False 1266.333333 2335 89.670167 2 6040 6 chr4B.!!$F1 6038
4 TraesCS4A01G031800 chr5D 547607257 547610661 3404 True 442.500000 745 86.996000 1248 5053 4 chr5D.!!$R1 3805
5 TraesCS4A01G031800 chrUn 68495166 68496518 1352 True 474.000000 739 87.159000 3770 5053 2 chrUn.!!$R1 1283
6 TraesCS4A01G031800 chrUn 68508357 68509191 834 True 394.000000 499 86.008000 1248 2148 2 chrUn.!!$R2 900
7 TraesCS4A01G031800 chr5B 690906368 690909509 3141 False 379.800000 715 83.696400 1248 5050 5 chr5B.!!$F1 3802

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
880 911 0.393808 TTATTTGACGCTCAGGGGGC 60.394 55.000 0.00 0.0 0.00 5.80 F
1374 1414 0.460284 CCGACGACTCCCAAATCCAG 60.460 60.000 0.00 0.0 0.00 3.86 F
2312 2390 0.322816 TCCGGGCGACTTACTGTAGT 60.323 55.000 0.00 0.0 0.00 2.73 F
2527 2613 1.496429 ACCTTCCCCTTCATAGCCATG 59.504 52.381 0.00 0.0 0.00 3.66 F
4228 4618 0.443869 CGCGCTGTGCTATTTTGAGT 59.556 50.000 11.82 0.0 43.27 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2182 2247 0.314935 AAAACACTGGGCGCATCAAG 59.685 50.0 10.83 2.74 0.00 3.02 R
2559 2645 0.386838 GTGCCACTGCTTTGCTTCTT 59.613 50.0 0.00 0.00 38.71 2.52 R
3404 3674 1.026718 CAACTTCGGAGATGCCCCAC 61.027 60.0 0.00 0.00 35.04 4.61 R
4373 4769 0.535553 TACCTTTTCGGCCAAAGCGT 60.536 50.0 2.24 8.85 41.24 5.07 R
5681 6269 0.102844 TCGACCAGGTTCGTTCGTTT 59.897 50.0 0.00 0.00 40.07 3.60 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 59 5.411361 TCATGTTCGATCGAAAATCCAACTT 59.589 36.000 30.61 13.24 35.75 2.66
94 96 0.596600 GCACTCTCGTCCGTGAAACA 60.597 55.000 0.00 0.00 35.74 2.83
124 126 4.082300 AGCATTGTTGTATCAAATTGCCGA 60.082 37.500 0.00 0.00 35.32 5.54
212 231 2.231716 AGGGTTAAAATCTGGCACCC 57.768 50.000 0.00 0.00 46.77 4.61
213 232 2.231716 GGGTTAAAATCTGGCACCCT 57.768 50.000 0.00 0.00 43.51 4.34
214 233 2.100197 GGGTTAAAATCTGGCACCCTC 58.900 52.381 0.00 0.00 43.51 4.30
215 234 2.291605 GGGTTAAAATCTGGCACCCTCT 60.292 50.000 0.00 0.00 43.51 3.69
216 235 2.755103 GGTTAAAATCTGGCACCCTCTG 59.245 50.000 0.00 0.00 0.00 3.35
217 236 2.755103 GTTAAAATCTGGCACCCTCTGG 59.245 50.000 0.00 0.00 37.80 3.86
219 238 1.668826 AAATCTGGCACCCTCTGGTA 58.331 50.000 0.00 0.00 45.57 3.25
220 239 0.912486 AATCTGGCACCCTCTGGTAC 59.088 55.000 0.00 0.00 45.57 3.34
221 240 1.330655 ATCTGGCACCCTCTGGTACG 61.331 60.000 0.00 0.00 45.57 3.67
222 241 2.203728 TGGCACCCTCTGGTACGT 60.204 61.111 0.00 0.00 45.57 3.57
223 242 2.264794 GGCACCCTCTGGTACGTG 59.735 66.667 0.00 0.00 45.57 4.49
224 243 2.280552 GGCACCCTCTGGTACGTGA 61.281 63.158 0.00 0.00 45.57 4.35
225 244 1.215647 GCACCCTCTGGTACGTGAG 59.784 63.158 0.00 0.00 45.57 3.51
226 245 1.890894 CACCCTCTGGTACGTGAGG 59.109 63.158 19.83 19.83 45.57 3.86
227 246 1.982938 ACCCTCTGGTACGTGAGGC 60.983 63.158 20.83 0.00 45.45 4.70
228 247 2.722201 CCCTCTGGTACGTGAGGCC 61.722 68.421 20.83 0.00 45.71 5.19
242 261 3.810896 GGCCCCGATTGAACGCAC 61.811 66.667 0.00 0.00 0.00 5.34
244 263 2.406616 GCCCCGATTGAACGCACAT 61.407 57.895 0.00 0.00 0.00 3.21
258 277 6.212235 TGAACGCACATCAATTAATTGTTGT 58.788 32.000 27.72 27.72 46.11 3.32
259 278 6.699204 TGAACGCACATCAATTAATTGTTGTT 59.301 30.769 29.58 20.58 44.06 2.83
268 287 8.661257 CATCAATTAATTGTTGTTGCATGACAT 58.339 29.630 23.95 6.29 38.84 3.06
302 327 2.413677 TTGCACGGCAATGTTCACT 58.586 47.368 7.15 0.00 43.99 3.41
322 347 7.087409 TCACTGTAGAACATGGCAAATTATG 57.913 36.000 0.00 0.00 0.00 1.90
328 354 9.353431 TGTAGAACATGGCAAATTATGATACAT 57.647 29.630 0.00 0.00 0.00 2.29
359 385 7.884257 TGACAATTCTATCTGTTTTTGCATGA 58.116 30.769 0.00 0.00 0.00 3.07
362 388 7.811236 ACAATTCTATCTGTTTTTGCATGACAG 59.189 33.333 14.88 14.88 41.57 3.51
370 396 6.476380 TCTGTTTTTGCATGACAGACATTTTC 59.524 34.615 18.03 0.00 43.38 2.29
413 439 6.900074 CGGACTTTTAACATTTCCGTTTAC 57.100 37.500 0.12 0.00 43.46 2.01
444 470 8.600625 GGTTTTGTTCCATTTCTTAAACTTGTC 58.399 33.333 0.00 0.00 0.00 3.18
543 574 1.740296 CGGTAGGCGTGGACCTTTG 60.740 63.158 0.00 0.00 41.50 2.77
548 579 4.966787 GCGTGGACCTTTGCCCCA 62.967 66.667 0.00 0.00 0.00 4.96
549 580 2.035626 CGTGGACCTTTGCCCCAT 59.964 61.111 0.00 0.00 31.94 4.00
550 581 1.606313 CGTGGACCTTTGCCCCATT 60.606 57.895 0.00 0.00 31.94 3.16
551 582 1.184970 CGTGGACCTTTGCCCCATTT 61.185 55.000 0.00 0.00 31.94 2.32
552 583 1.888826 CGTGGACCTTTGCCCCATTTA 60.889 52.381 0.00 0.00 31.94 1.40
553 584 1.824852 GTGGACCTTTGCCCCATTTAG 59.175 52.381 0.00 0.00 31.94 1.85
554 585 1.272985 TGGACCTTTGCCCCATTTAGG 60.273 52.381 0.00 0.00 37.03 2.69
561 592 3.615597 GCCCCATTTAGGCCTTCTT 57.384 52.632 12.58 0.00 45.16 2.52
562 593 1.866015 GCCCCATTTAGGCCTTCTTT 58.134 50.000 12.58 0.00 45.16 2.52
563 594 1.482182 GCCCCATTTAGGCCTTCTTTG 59.518 52.381 12.58 3.98 45.16 2.77
564 595 2.110578 CCCCATTTAGGCCTTCTTTGG 58.889 52.381 12.58 13.47 35.39 3.28
565 596 2.559705 CCCCATTTAGGCCTTCTTTGGT 60.560 50.000 12.58 0.00 35.39 3.67
566 597 3.173151 CCCATTTAGGCCTTCTTTGGTT 58.827 45.455 12.58 0.00 35.39 3.67
567 598 3.582647 CCCATTTAGGCCTTCTTTGGTTT 59.417 43.478 12.58 0.00 35.39 3.27
568 599 4.563374 CCCATTTAGGCCTTCTTTGGTTTG 60.563 45.833 12.58 0.00 35.39 2.93
569 600 4.040339 CCATTTAGGCCTTCTTTGGTTTGT 59.960 41.667 12.58 0.00 0.00 2.83
570 601 5.245075 CCATTTAGGCCTTCTTTGGTTTGTA 59.755 40.000 12.58 0.00 0.00 2.41
571 602 6.389906 CATTTAGGCCTTCTTTGGTTTGTAG 58.610 40.000 12.58 0.00 0.00 2.74
572 603 2.876581 AGGCCTTCTTTGGTTTGTAGG 58.123 47.619 0.00 0.00 0.00 3.18
573 604 2.445525 AGGCCTTCTTTGGTTTGTAGGA 59.554 45.455 0.00 0.00 0.00 2.94
574 605 3.117284 AGGCCTTCTTTGGTTTGTAGGAA 60.117 43.478 0.00 0.00 0.00 3.36
575 606 3.832490 GGCCTTCTTTGGTTTGTAGGAAT 59.168 43.478 0.00 0.00 0.00 3.01
576 607 4.283467 GGCCTTCTTTGGTTTGTAGGAATT 59.717 41.667 0.00 0.00 0.00 2.17
577 608 5.221641 GGCCTTCTTTGGTTTGTAGGAATTT 60.222 40.000 0.00 0.00 0.00 1.82
578 609 5.926542 GCCTTCTTTGGTTTGTAGGAATTTC 59.073 40.000 0.00 0.00 0.00 2.17
579 610 6.462347 GCCTTCTTTGGTTTGTAGGAATTTCA 60.462 38.462 0.00 0.00 0.00 2.69
580 611 7.670364 CCTTCTTTGGTTTGTAGGAATTTCAT 58.330 34.615 0.00 0.00 0.00 2.57
581 612 8.802267 CCTTCTTTGGTTTGTAGGAATTTCATA 58.198 33.333 0.00 0.00 0.00 2.15
582 613 9.846248 CTTCTTTGGTTTGTAGGAATTTCATAG 57.154 33.333 0.00 0.00 0.00 2.23
583 614 8.348285 TCTTTGGTTTGTAGGAATTTCATAGG 57.652 34.615 0.00 0.00 0.00 2.57
584 615 8.167392 TCTTTGGTTTGTAGGAATTTCATAGGA 58.833 33.333 0.00 0.00 0.00 2.94
585 616 8.713708 TTTGGTTTGTAGGAATTTCATAGGAA 57.286 30.769 0.00 0.00 0.00 3.36
586 617 8.893563 TTGGTTTGTAGGAATTTCATAGGAAT 57.106 30.769 0.00 0.00 31.93 3.01
587 618 8.893563 TGGTTTGTAGGAATTTCATAGGAATT 57.106 30.769 0.00 0.00 31.93 2.17
588 619 8.966868 TGGTTTGTAGGAATTTCATAGGAATTC 58.033 33.333 0.00 0.00 31.93 2.17
589 620 9.190317 GGTTTGTAGGAATTTCATAGGAATTCT 57.810 33.333 5.23 0.00 31.93 2.40
636 667 6.493189 TTTTTCCTTTAGAGCCATTTGGTT 57.507 33.333 0.00 0.00 37.57 3.67
637 668 5.722021 TTTCCTTTAGAGCCATTTGGTTC 57.278 39.130 5.38 5.38 44.60 3.62
638 669 4.380843 TCCTTTAGAGCCATTTGGTTCA 57.619 40.909 14.77 0.09 46.37 3.18
639 670 4.934356 TCCTTTAGAGCCATTTGGTTCAT 58.066 39.130 14.77 4.10 46.37 2.57
640 671 6.073447 TCCTTTAGAGCCATTTGGTTCATA 57.927 37.500 14.77 3.29 46.37 2.15
641 672 6.122277 TCCTTTAGAGCCATTTGGTTCATAG 58.878 40.000 14.77 8.64 46.37 2.23
642 673 5.300286 CCTTTAGAGCCATTTGGTTCATAGG 59.700 44.000 14.77 12.78 46.37 2.57
643 674 5.708736 TTAGAGCCATTTGGTTCATAGGA 57.291 39.130 14.77 0.00 46.37 2.94
644 675 4.591321 AGAGCCATTTGGTTCATAGGAA 57.409 40.909 14.77 0.00 46.37 3.36
645 676 5.134725 AGAGCCATTTGGTTCATAGGAAT 57.865 39.130 14.77 0.00 46.37 3.01
646 677 4.891756 AGAGCCATTTGGTTCATAGGAATG 59.108 41.667 14.77 0.00 46.37 2.67
647 678 3.962718 AGCCATTTGGTTCATAGGAATGG 59.037 43.478 8.63 8.63 45.96 3.16
648 679 3.960102 GCCATTTGGTTCATAGGAATGGA 59.040 43.478 15.46 0.00 46.06 3.41
649 680 4.590222 GCCATTTGGTTCATAGGAATGGAT 59.410 41.667 15.46 0.00 46.06 3.41
650 681 5.070847 GCCATTTGGTTCATAGGAATGGATT 59.929 40.000 15.46 0.00 46.06 3.01
651 682 6.739565 GCCATTTGGTTCATAGGAATGGATTC 60.740 42.308 15.46 0.00 46.06 2.52
652 683 9.567931 GCCATTTGGTTCATAGGAATGGATTCC 62.568 44.444 15.46 10.03 46.06 3.01
675 706 7.974504 TCCTATTTCTACATAGGATTGGTTCC 58.025 38.462 5.49 0.00 46.83 3.62
686 717 4.503714 GGATTGGTTCCTATCCTTCACA 57.496 45.455 19.71 0.00 41.78 3.58
687 718 5.053978 GGATTGGTTCCTATCCTTCACAT 57.946 43.478 19.71 0.00 41.78 3.21
688 719 5.449553 GGATTGGTTCCTATCCTTCACATT 58.550 41.667 19.71 0.00 41.78 2.71
689 720 5.893824 GGATTGGTTCCTATCCTTCACATTT 59.106 40.000 19.71 0.00 41.78 2.32
690 721 6.381133 GGATTGGTTCCTATCCTTCACATTTT 59.619 38.462 19.71 0.00 41.78 1.82
691 722 7.559897 GGATTGGTTCCTATCCTTCACATTTTA 59.440 37.037 19.71 0.00 41.78 1.52
692 723 9.136323 GATTGGTTCCTATCCTTCACATTTTAT 57.864 33.333 2.68 0.00 0.00 1.40
694 725 9.627123 TTGGTTCCTATCCTTCACATTTTATAG 57.373 33.333 0.00 0.00 0.00 1.31
695 726 8.217799 TGGTTCCTATCCTTCACATTTTATAGG 58.782 37.037 0.00 0.00 38.09 2.57
696 727 8.437575 GGTTCCTATCCTTCACATTTTATAGGA 58.562 37.037 0.00 0.00 41.87 2.94
697 728 9.847224 GTTCCTATCCTTCACATTTTATAGGAA 57.153 33.333 14.58 14.58 46.36 3.36
718 749 8.512966 AGGAAAATAAAAATGAGCCTAGACTC 57.487 34.615 0.00 0.00 37.19 3.36
752 783 9.696917 AAATTCCTTTGATGTGAACTAAATGAC 57.303 29.630 0.00 0.00 0.00 3.06
753 784 7.815840 TTCCTTTGATGTGAACTAAATGACA 57.184 32.000 0.00 0.00 0.00 3.58
754 785 8.408043 TTCCTTTGATGTGAACTAAATGACAT 57.592 30.769 0.00 0.00 0.00 3.06
755 786 8.044060 TCCTTTGATGTGAACTAAATGACATC 57.956 34.615 0.00 0.00 43.31 3.06
756 787 7.884877 TCCTTTGATGTGAACTAAATGACATCT 59.115 33.333 0.00 0.00 43.38 2.90
757 788 8.180267 CCTTTGATGTGAACTAAATGACATCTC 58.820 37.037 0.00 0.00 43.38 2.75
758 789 6.892310 TGATGTGAACTAAATGACATCTCG 57.108 37.500 0.00 0.00 43.38 4.04
759 790 6.398095 TGATGTGAACTAAATGACATCTCGT 58.602 36.000 0.00 0.00 43.38 4.18
760 791 6.873605 TGATGTGAACTAAATGACATCTCGTT 59.126 34.615 0.00 0.00 43.38 3.85
761 792 7.387673 TGATGTGAACTAAATGACATCTCGTTT 59.612 33.333 0.00 0.00 43.38 3.60
762 793 7.117241 TGTGAACTAAATGACATCTCGTTTC 57.883 36.000 0.00 0.00 36.99 2.78
763 794 6.147164 TGTGAACTAAATGACATCTCGTTTCC 59.853 38.462 0.00 0.00 36.99 3.13
764 795 6.369065 GTGAACTAAATGACATCTCGTTTCCT 59.631 38.462 0.00 0.00 36.99 3.36
765 796 7.544566 GTGAACTAAATGACATCTCGTTTCCTA 59.455 37.037 0.00 0.00 36.99 2.94
766 797 8.258007 TGAACTAAATGACATCTCGTTTCCTAT 58.742 33.333 0.00 0.00 36.99 2.57
767 798 9.099454 GAACTAAATGACATCTCGTTTCCTATT 57.901 33.333 0.00 0.00 36.99 1.73
768 799 8.649973 ACTAAATGACATCTCGTTTCCTATTC 57.350 34.615 0.00 0.00 36.99 1.75
769 800 6.927294 AAATGACATCTCGTTTCCTATTCC 57.073 37.500 0.00 0.00 30.98 3.01
770 801 5.878406 ATGACATCTCGTTTCCTATTCCT 57.122 39.130 0.00 0.00 0.00 3.36
771 802 6.978674 ATGACATCTCGTTTCCTATTCCTA 57.021 37.500 0.00 0.00 0.00 2.94
772 803 6.145338 TGACATCTCGTTTCCTATTCCTAC 57.855 41.667 0.00 0.00 0.00 3.18
773 804 5.892119 TGACATCTCGTTTCCTATTCCTACT 59.108 40.000 0.00 0.00 0.00 2.57
774 805 6.039493 TGACATCTCGTTTCCTATTCCTACTC 59.961 42.308 0.00 0.00 0.00 2.59
775 806 5.892119 ACATCTCGTTTCCTATTCCTACTCA 59.108 40.000 0.00 0.00 0.00 3.41
776 807 6.551601 ACATCTCGTTTCCTATTCCTACTCAT 59.448 38.462 0.00 0.00 0.00 2.90
777 808 7.724506 ACATCTCGTTTCCTATTCCTACTCATA 59.275 37.037 0.00 0.00 0.00 2.15
778 809 7.747155 TCTCGTTTCCTATTCCTACTCATAG 57.253 40.000 0.00 0.00 0.00 2.23
797 828 8.899427 CTCATAGGATTTGAGTTACATGTCAT 57.101 34.615 0.00 0.00 36.64 3.06
798 829 8.893219 TCATAGGATTTGAGTTACATGTCATC 57.107 34.615 0.00 0.00 0.00 2.92
799 830 8.708378 TCATAGGATTTGAGTTACATGTCATCT 58.292 33.333 0.00 0.00 0.00 2.90
800 831 8.986847 CATAGGATTTGAGTTACATGTCATCTC 58.013 37.037 0.00 9.54 0.00 2.75
801 832 6.950842 AGGATTTGAGTTACATGTCATCTCA 58.049 36.000 17.59 17.59 34.08 3.27
802 833 7.571919 AGGATTTGAGTTACATGTCATCTCAT 58.428 34.615 20.32 11.71 35.54 2.90
803 834 8.051535 AGGATTTGAGTTACATGTCATCTCATT 58.948 33.333 20.32 14.28 35.54 2.57
804 835 8.680903 GGATTTGAGTTACATGTCATCTCATTT 58.319 33.333 20.32 14.05 35.54 2.32
807 838 8.853077 TTGAGTTACATGTCATCTCATTTTCT 57.147 30.769 20.32 0.00 35.54 2.52
808 839 9.942850 TTGAGTTACATGTCATCTCATTTTCTA 57.057 29.630 20.32 8.45 35.54 2.10
847 878 9.661954 TCCTATGATAATCCTATCCTATGAACC 57.338 37.037 0.00 0.00 34.10 3.62
848 879 9.439461 CCTATGATAATCCTATCCTATGAACCA 57.561 37.037 0.00 0.00 34.10 3.67
855 886 6.500589 TCCTATCCTATGAACCAAAAGAGG 57.499 41.667 0.00 0.00 0.00 3.69
856 887 5.066593 CCTATCCTATGAACCAAAAGAGGC 58.933 45.833 0.00 0.00 0.00 4.70
857 888 3.366052 TCCTATGAACCAAAAGAGGCC 57.634 47.619 0.00 0.00 0.00 5.19
858 889 2.919602 TCCTATGAACCAAAAGAGGCCT 59.080 45.455 3.86 3.86 0.00 5.19
859 890 3.333680 TCCTATGAACCAAAAGAGGCCTT 59.666 43.478 6.77 0.00 0.00 4.35
860 891 4.538490 TCCTATGAACCAAAAGAGGCCTTA 59.462 41.667 6.77 0.00 31.15 2.69
861 892 5.193728 TCCTATGAACCAAAAGAGGCCTTAT 59.806 40.000 6.77 0.00 31.15 1.73
874 905 4.127171 GAGGCCTTATTATTTGACGCTCA 58.873 43.478 6.77 0.00 0.00 4.26
879 910 2.348411 ATTATTTGACGCTCAGGGGG 57.652 50.000 0.00 0.00 0.00 5.40
880 911 0.393808 TTATTTGACGCTCAGGGGGC 60.394 55.000 0.00 0.00 0.00 5.80
892 923 4.868116 GGGGGCGCTCGGCATTAA 62.868 66.667 17.26 0.00 46.16 1.40
893 924 3.583086 GGGGCGCTCGGCATTAAC 61.583 66.667 17.26 0.00 46.16 2.01
894 925 3.583086 GGGCGCTCGGCATTAACC 61.583 66.667 17.26 0.00 46.16 2.85
902 933 4.954933 GGCATTAACCGCCTGAGA 57.045 55.556 9.95 0.00 46.56 3.27
903 934 3.168773 GGCATTAACCGCCTGAGAA 57.831 52.632 9.95 0.00 46.56 2.87
904 935 0.733150 GGCATTAACCGCCTGAGAAC 59.267 55.000 9.95 0.00 46.56 3.01
905 936 0.733150 GCATTAACCGCCTGAGAACC 59.267 55.000 0.00 0.00 0.00 3.62
906 937 1.948611 GCATTAACCGCCTGAGAACCA 60.949 52.381 0.00 0.00 0.00 3.67
907 938 2.432444 CATTAACCGCCTGAGAACCAA 58.568 47.619 0.00 0.00 0.00 3.67
908 939 2.871096 TTAACCGCCTGAGAACCAAT 57.129 45.000 0.00 0.00 0.00 3.16
909 940 3.985019 TTAACCGCCTGAGAACCAATA 57.015 42.857 0.00 0.00 0.00 1.90
910 941 2.871096 AACCGCCTGAGAACCAATAA 57.129 45.000 0.00 0.00 0.00 1.40
911 942 2.871096 ACCGCCTGAGAACCAATAAA 57.129 45.000 0.00 0.00 0.00 1.40
912 943 3.149005 ACCGCCTGAGAACCAATAAAA 57.851 42.857 0.00 0.00 0.00 1.52
913 944 3.492337 ACCGCCTGAGAACCAATAAAAA 58.508 40.909 0.00 0.00 0.00 1.94
1007 1038 2.935849 CACCTCACGCAGCACAATATAA 59.064 45.455 0.00 0.00 0.00 0.98
1008 1039 3.561310 CACCTCACGCAGCACAATATAAT 59.439 43.478 0.00 0.00 0.00 1.28
1009 1040 3.809832 ACCTCACGCAGCACAATATAATC 59.190 43.478 0.00 0.00 0.00 1.75
1010 1041 3.120889 CCTCACGCAGCACAATATAATCG 60.121 47.826 0.00 0.00 0.00 3.34
1374 1414 0.460284 CCGACGACTCCCAAATCCAG 60.460 60.000 0.00 0.00 0.00 3.86
1771 1830 0.737715 GCAGCAGGTACGTCTCTTGG 60.738 60.000 0.00 0.00 0.00 3.61
1783 1844 2.481104 CGTCTCTTGGCTTGATCCTCTC 60.481 54.545 0.00 0.00 0.00 3.20
1788 1849 2.550277 TGGCTTGATCCTCTCCACTA 57.450 50.000 0.00 0.00 0.00 2.74
1799 1860 1.153745 CTCCACTACCACGCTCTGC 60.154 63.158 0.00 0.00 0.00 4.26
1800 1861 1.877576 CTCCACTACCACGCTCTGCA 61.878 60.000 0.00 0.00 0.00 4.41
1801 1862 1.005037 CCACTACCACGCTCTGCAA 60.005 57.895 0.00 0.00 0.00 4.08
1823 1887 7.558161 CAAATGTGCTCTCATCTGGTTATTA 57.442 36.000 0.00 0.00 0.00 0.98
1861 1926 4.582869 TGCAGTATGAAGCTTGATTCTGT 58.417 39.130 25.33 0.00 39.69 3.41
1957 2022 0.963355 TGGGCAAGTTTACCGGCATC 60.963 55.000 0.00 0.00 0.00 3.91
1993 2058 1.166129 TCCCGTCGTCTCAGAAAGAG 58.834 55.000 0.00 0.00 46.14 2.85
2071 2136 0.741221 GGACGCTCACCAAGTGGATC 60.741 60.000 3.83 0.00 39.97 3.36
2173 2238 6.544197 AGCTTAGTTCTCTTGTCATCGATCTA 59.456 38.462 0.00 0.00 0.00 1.98
2182 2247 6.042777 TCTTGTCATCGATCTATTTGTGTCC 58.957 40.000 0.00 0.00 0.00 4.02
2190 2262 4.318333 CGATCTATTTGTGTCCTTGATGCG 60.318 45.833 0.00 0.00 0.00 4.73
2202 2274 1.539388 CTTGATGCGCCCAGTGTTTTA 59.461 47.619 4.18 0.00 0.00 1.52
2203 2275 1.610363 TGATGCGCCCAGTGTTTTAA 58.390 45.000 4.18 0.00 0.00 1.52
2207 2279 1.176619 GCGCCCAGTGTTTTAAGGGT 61.177 55.000 0.00 0.00 43.42 4.34
2208 2280 0.596082 CGCCCAGTGTTTTAAGGGTG 59.404 55.000 0.00 0.00 44.52 4.61
2219 2291 6.541278 AGTGTTTTAAGGGTGACTTACTGTTC 59.459 38.462 0.00 0.00 41.24 3.18
2285 2363 4.772886 AAGGTCCATACTCATTACACCC 57.227 45.455 0.00 0.00 0.00 4.61
2300 2378 3.361977 CCCAGTGTTTTCCGGGCG 61.362 66.667 0.00 0.00 0.00 6.13
2310 2388 1.255882 TTTCCGGGCGACTTACTGTA 58.744 50.000 0.00 0.00 0.00 2.74
2311 2389 0.813184 TTCCGGGCGACTTACTGTAG 59.187 55.000 0.00 0.00 0.00 2.74
2312 2390 0.322816 TCCGGGCGACTTACTGTAGT 60.323 55.000 0.00 0.00 0.00 2.73
2315 2393 2.164219 CCGGGCGACTTACTGTAGTTTA 59.836 50.000 0.00 0.00 0.00 2.01
2316 2394 3.432782 CGGGCGACTTACTGTAGTTTAG 58.567 50.000 0.00 0.00 0.00 1.85
2317 2395 3.119708 CGGGCGACTTACTGTAGTTTAGT 60.120 47.826 0.00 0.00 0.00 2.24
2318 2396 4.171754 GGGCGACTTACTGTAGTTTAGTG 58.828 47.826 0.00 1.09 0.00 2.74
2352 2432 5.070981 TGCTAATAGTGAAGGGAGAAGGATG 59.929 44.000 0.00 0.00 0.00 3.51
2353 2433 5.071115 GCTAATAGTGAAGGGAGAAGGATGT 59.929 44.000 0.00 0.00 0.00 3.06
2375 2456 5.962031 TGTTAGGTCCATACTCATTACAGGT 59.038 40.000 0.00 0.00 0.00 4.00
2390 2471 7.847096 TCATTACAGGTGTTATTTCTCAGCTA 58.153 34.615 0.00 0.00 39.82 3.32
2411 2492 5.229887 GCTACAAACAATAATGGCATTGACG 59.770 40.000 22.57 12.13 38.01 4.35
2428 2509 2.543848 TGACGGCAATATTCATTCGAGC 59.456 45.455 0.00 0.00 0.00 5.03
2453 2539 7.011857 GCCTTCATGTCCTTGTAAGAAATAGAG 59.988 40.741 0.00 0.00 0.00 2.43
2527 2613 1.496429 ACCTTCCCCTTCATAGCCATG 59.504 52.381 0.00 0.00 0.00 3.66
2536 2622 4.040829 CCCTTCATAGCCATGAGATGTACA 59.959 45.833 0.00 0.00 42.11 2.90
2537 2623 4.993584 CCTTCATAGCCATGAGATGTACAC 59.006 45.833 0.00 0.00 42.11 2.90
2556 2642 3.243434 ACACCGATAACTATCCGCAAGAG 60.243 47.826 0.00 0.00 43.02 2.85
2557 2643 2.288273 ACCGATAACTATCCGCAAGAGC 60.288 50.000 0.00 0.00 43.02 4.09
2558 2644 2.288213 CCGATAACTATCCGCAAGAGCA 60.288 50.000 0.00 0.00 42.27 4.26
2559 2645 3.381045 CGATAACTATCCGCAAGAGCAA 58.619 45.455 0.00 0.00 42.27 3.91
2560 2646 3.802139 CGATAACTATCCGCAAGAGCAAA 59.198 43.478 0.00 0.00 42.27 3.68
2561 2647 4.084849 CGATAACTATCCGCAAGAGCAAAG 60.085 45.833 0.00 0.00 42.27 2.77
2562 2648 3.334583 AACTATCCGCAAGAGCAAAGA 57.665 42.857 0.00 0.00 42.27 2.52
2590 2676 2.612972 GCAGTGGCACTTACTTGCTAGA 60.613 50.000 19.43 0.00 42.56 2.43
2614 2700 2.079925 GCCACTAACTTGCTTCCTCTG 58.920 52.381 0.00 0.00 0.00 3.35
2615 2701 2.551071 GCCACTAACTTGCTTCCTCTGT 60.551 50.000 0.00 0.00 0.00 3.41
2693 2780 9.116067 AGTCTAGTATGAGTCAGTGAATTAGAC 57.884 37.037 16.26 16.26 35.65 2.59
2767 2854 2.114670 GGGGTGTCATCATGGTGCG 61.115 63.158 0.00 0.00 0.00 5.34
2794 2881 5.242434 GTGTTATGTTAGGTGTGATGACCA 58.758 41.667 0.00 0.00 38.63 4.02
2870 2964 6.753744 GCATCTGTTTTCCAAGGACATAAATC 59.246 38.462 0.00 0.00 0.00 2.17
2972 3104 6.798959 GCTCTCATGTAAACTAGTTGCTTTTG 59.201 38.462 9.34 4.43 0.00 2.44
2997 3132 7.173218 TGTGATTGAATGAGTCCAGTTTCTTAC 59.827 37.037 0.00 0.00 0.00 2.34
3269 3439 2.565210 TGTGCTGCTTGTTGAACTTG 57.435 45.000 0.00 0.00 0.00 3.16
3271 3441 2.159393 TGTGCTGCTTGTTGAACTTGTC 60.159 45.455 0.00 0.00 0.00 3.18
3308 3542 5.487488 TGATAGGTAGAGGCTTTGGAAAAGA 59.513 40.000 3.95 0.00 0.00 2.52
3335 3569 4.582701 TTTCTTTATGCAGTGGGTTGTG 57.417 40.909 0.00 0.00 0.00 3.33
3345 3581 3.678529 GCAGTGGGTTGTGTTCAATTTGT 60.679 43.478 0.00 0.00 35.92 2.83
3347 3583 5.738783 GCAGTGGGTTGTGTTCAATTTGTAT 60.739 40.000 0.00 0.00 35.92 2.29
3530 3878 6.596888 TCATAATCTTATAGCCAATCAGCTGC 59.403 38.462 9.47 0.00 44.67 5.25
3691 4042 9.813826 ATTCAACTAGCCTTGGCTATATAATTT 57.186 29.630 20.15 0.69 0.00 1.82
3742 4132 6.313519 TCTGTTTCTATATGGTGCCTCTTT 57.686 37.500 0.00 0.00 0.00 2.52
3743 4133 6.721318 TCTGTTTCTATATGGTGCCTCTTTT 58.279 36.000 0.00 0.00 0.00 2.27
3744 4134 7.857456 TCTGTTTCTATATGGTGCCTCTTTTA 58.143 34.615 0.00 0.00 0.00 1.52
3745 4135 7.769044 TCTGTTTCTATATGGTGCCTCTTTTAC 59.231 37.037 0.00 0.00 0.00 2.01
3746 4136 7.630082 TGTTTCTATATGGTGCCTCTTTTACT 58.370 34.615 0.00 0.00 0.00 2.24
3747 4137 7.769044 TGTTTCTATATGGTGCCTCTTTTACTC 59.231 37.037 0.00 0.00 0.00 2.59
3748 4138 7.676683 TTCTATATGGTGCCTCTTTTACTCT 57.323 36.000 0.00 0.00 0.00 3.24
3749 4139 7.291411 TCTATATGGTGCCTCTTTTACTCTC 57.709 40.000 0.00 0.00 0.00 3.20
3750 4140 7.069986 TCTATATGGTGCCTCTTTTACTCTCT 58.930 38.462 0.00 0.00 0.00 3.10
3751 4141 4.917906 ATGGTGCCTCTTTTACTCTCTT 57.082 40.909 0.00 0.00 0.00 2.85
3752 4142 4.706842 TGGTGCCTCTTTTACTCTCTTT 57.293 40.909 0.00 0.00 0.00 2.52
3753 4143 5.818678 TGGTGCCTCTTTTACTCTCTTTA 57.181 39.130 0.00 0.00 0.00 1.85
3754 4144 6.374417 TGGTGCCTCTTTTACTCTCTTTAT 57.626 37.500 0.00 0.00 0.00 1.40
3755 4145 6.779860 TGGTGCCTCTTTTACTCTCTTTATT 58.220 36.000 0.00 0.00 0.00 1.40
3756 4146 7.231467 TGGTGCCTCTTTTACTCTCTTTATTT 58.769 34.615 0.00 0.00 0.00 1.40
3757 4147 7.174946 TGGTGCCTCTTTTACTCTCTTTATTTG 59.825 37.037 0.00 0.00 0.00 2.32
3758 4148 7.024171 GTGCCTCTTTTACTCTCTTTATTTGC 58.976 38.462 0.00 0.00 0.00 3.68
3759 4149 6.128282 TGCCTCTTTTACTCTCTTTATTTGCG 60.128 38.462 0.00 0.00 0.00 4.85
3760 4150 6.675728 GCCTCTTTTACTCTCTTTATTTGCGG 60.676 42.308 0.00 0.00 0.00 5.69
3761 4151 6.594159 CCTCTTTTACTCTCTTTATTTGCGGA 59.406 38.462 0.00 0.00 0.00 5.54
3762 4152 7.201565 CCTCTTTTACTCTCTTTATTTGCGGAG 60.202 40.741 0.00 0.00 0.00 4.63
3763 4153 6.594159 TCTTTTACTCTCTTTATTTGCGGAGG 59.406 38.462 0.00 0.00 0.00 4.30
3764 4154 3.983044 ACTCTCTTTATTTGCGGAGGT 57.017 42.857 0.00 0.00 0.00 3.85
3765 4155 3.863041 ACTCTCTTTATTTGCGGAGGTC 58.137 45.455 0.00 0.00 0.00 3.85
3766 4156 3.198872 CTCTCTTTATTTGCGGAGGTCC 58.801 50.000 0.00 0.00 0.00 4.46
3767 4157 2.838202 TCTCTTTATTTGCGGAGGTCCT 59.162 45.455 0.00 0.00 0.00 3.85
3768 4158 3.118738 TCTCTTTATTTGCGGAGGTCCTC 60.119 47.826 10.78 10.78 0.00 3.71
4020 4410 4.878397 GGACAGGTTATCATCTTTGTGAGG 59.122 45.833 0.00 0.00 0.00 3.86
4143 4533 8.884124 AAGTAATTCAGGAATTCAAAGATGGA 57.116 30.769 10.32 0.00 40.99 3.41
4226 4616 1.134487 GCGCGCTGTGCTATTTTGA 59.866 52.632 26.67 0.00 43.27 2.69
4227 4617 0.858961 GCGCGCTGTGCTATTTTGAG 60.859 55.000 26.67 0.00 43.27 3.02
4228 4618 0.443869 CGCGCTGTGCTATTTTGAGT 59.556 50.000 11.82 0.00 43.27 3.41
4229 4619 1.135972 CGCGCTGTGCTATTTTGAGTT 60.136 47.619 11.82 0.00 43.27 3.01
4231 4621 3.308530 GCGCTGTGCTATTTTGAGTTTT 58.691 40.909 5.84 0.00 41.73 2.43
4232 4622 3.735746 GCGCTGTGCTATTTTGAGTTTTT 59.264 39.130 5.84 0.00 41.73 1.94
4233 4623 4.375305 GCGCTGTGCTATTTTGAGTTTTTG 60.375 41.667 5.84 0.00 41.73 2.44
4256 4652 9.575868 TTTGACACACCAGTATAAATTTTCCTA 57.424 29.630 0.00 0.00 0.00 2.94
4301 4697 5.416947 GTTAACCTGGTCATCAACTACGAT 58.583 41.667 0.00 0.00 0.00 3.73
4373 4769 0.694771 ACAGAATTGGCAGAGCTGGA 59.305 50.000 14.25 0.00 0.00 3.86
4400 4796 4.245845 TGGCCGAAAAGGTAAATTTGTC 57.754 40.909 0.00 0.00 43.70 3.18
4403 4802 5.182380 TGGCCGAAAAGGTAAATTTGTCTAG 59.818 40.000 0.00 0.00 43.70 2.43
4447 4933 5.621197 TGTAAGCATATTTTGTCAACGCT 57.379 34.783 0.00 0.00 0.00 5.07
4469 4955 5.687770 TGTGACAGACATTAATGGTGTTG 57.312 39.130 20.55 14.40 31.68 3.33
4492 4978 3.490060 AGGAATTAAATGGCTTGGGGT 57.510 42.857 0.00 0.00 0.00 4.95
4582 5069 6.721318 TGTTTGTCCTAGCCTAAGATTGAAT 58.279 36.000 0.00 0.00 0.00 2.57
4636 5129 7.850193 AGGATTTTGCAATAGGATTTTTAGCA 58.150 30.769 0.00 0.00 0.00 3.49
4687 5180 8.028354 TGATGTGACCATTGTTTGTTGATTATC 58.972 33.333 0.00 0.00 0.00 1.75
4691 5184 4.111916 CCATTGTTTGTTGATTATCGGCC 58.888 43.478 0.00 0.00 0.00 6.13
4699 5192 3.627123 TGTTGATTATCGGCCTCATGTTG 59.373 43.478 0.00 0.00 0.00 3.33
4700 5193 3.558931 TGATTATCGGCCTCATGTTGT 57.441 42.857 0.00 0.00 0.00 3.32
4703 5196 4.096231 TGATTATCGGCCTCATGTTGTTTG 59.904 41.667 0.00 0.00 0.00 2.93
4704 5197 1.909700 ATCGGCCTCATGTTGTTTGT 58.090 45.000 0.00 0.00 0.00 2.83
4706 5199 1.606668 TCGGCCTCATGTTGTTTGTTC 59.393 47.619 0.00 0.00 0.00 3.18
4712 5205 5.510520 GGCCTCATGTTGTTTGTTCCATTTA 60.511 40.000 0.00 0.00 0.00 1.40
4713 5206 5.988561 GCCTCATGTTGTTTGTTCCATTTAA 59.011 36.000 0.00 0.00 0.00 1.52
4753 5249 6.857437 TGTGATCTCCTATTTCTTGAGACA 57.143 37.500 0.00 0.00 37.92 3.41
4777 5273 7.654520 ACAGTCAATTGATTTCCTTTGATTGTG 59.345 33.333 12.12 0.00 43.18 3.33
5015 5561 4.322567 AGGACAATTTTGAGACTGCTCTC 58.677 43.478 0.00 0.00 43.17 3.20
5060 5611 7.690256 AGTAAACATTCTCAGAAATAGGTGGT 58.310 34.615 0.00 0.00 0.00 4.16
5062 5613 4.265073 ACATTCTCAGAAATAGGTGGTGC 58.735 43.478 0.00 0.00 0.00 5.01
5063 5614 4.018960 ACATTCTCAGAAATAGGTGGTGCT 60.019 41.667 0.00 0.00 0.00 4.40
5064 5615 4.640771 TTCTCAGAAATAGGTGGTGCTT 57.359 40.909 0.00 0.00 0.00 3.91
5066 5617 5.086104 TCTCAGAAATAGGTGGTGCTTAC 57.914 43.478 0.00 0.00 0.00 2.34
5067 5618 4.081087 TCTCAGAAATAGGTGGTGCTTACC 60.081 45.833 0.00 0.00 38.52 2.85
5068 5619 2.936498 CAGAAATAGGTGGTGCTTACCG 59.064 50.000 0.00 0.00 43.06 4.02
5069 5620 1.669265 GAAATAGGTGGTGCTTACCGC 59.331 52.381 1.50 1.50 43.06 5.68
5080 5642 1.329292 TGCTTACCGCGATTATGTTGC 59.671 47.619 8.23 5.50 43.27 4.17
5148 5715 8.432013 AGTTATGTGGATTATGTTGAGCTGATA 58.568 33.333 0.00 0.00 0.00 2.15
5150 5717 5.988287 TGTGGATTATGTTGAGCTGATACA 58.012 37.500 0.00 0.00 0.00 2.29
5151 5718 6.051074 TGTGGATTATGTTGAGCTGATACAG 58.949 40.000 0.00 0.00 34.12 2.74
5175 5744 4.782691 TGAATTCTATGAGGGAGTGTCCAA 59.217 41.667 7.05 0.00 38.64 3.53
5176 5745 4.762289 ATTCTATGAGGGAGTGTCCAAC 57.238 45.455 0.00 0.00 38.64 3.77
5185 5755 3.074538 AGGGAGTGTCCAACTTTATGCTT 59.925 43.478 0.00 0.00 40.07 3.91
5189 5759 5.472137 GGAGTGTCCAACTTTATGCTTGTTA 59.528 40.000 0.00 0.00 40.07 2.41
5190 5760 6.151144 GGAGTGTCCAACTTTATGCTTGTTAT 59.849 38.462 0.00 0.00 40.07 1.89
5191 5761 7.309194 GGAGTGTCCAACTTTATGCTTGTTATT 60.309 37.037 0.00 0.00 40.07 1.40
5192 5762 7.951591 AGTGTCCAACTTTATGCTTGTTATTT 58.048 30.769 0.00 0.00 34.57 1.40
5193 5763 8.421002 AGTGTCCAACTTTATGCTTGTTATTTT 58.579 29.630 0.00 0.00 34.57 1.82
5194 5764 8.699749 GTGTCCAACTTTATGCTTGTTATTTTC 58.300 33.333 0.00 0.00 0.00 2.29
5195 5765 7.870445 TGTCCAACTTTATGCTTGTTATTTTCC 59.130 33.333 0.00 0.00 0.00 3.13
5196 5766 7.870445 GTCCAACTTTATGCTTGTTATTTTCCA 59.130 33.333 0.00 0.00 0.00 3.53
5197 5767 8.424918 TCCAACTTTATGCTTGTTATTTTCCAA 58.575 29.630 0.00 0.00 0.00 3.53
5198 5768 9.050601 CCAACTTTATGCTTGTTATTTTCCAAA 57.949 29.630 0.00 0.00 0.00 3.28
5200 5770 8.310406 ACTTTATGCTTGTTATTTTCCAAAGC 57.690 30.769 0.00 0.00 0.00 3.51
5201 5771 7.930865 ACTTTATGCTTGTTATTTTCCAAAGCA 59.069 29.630 10.45 10.45 32.99 3.91
5202 5772 8.845413 TTTATGCTTGTTATTTTCCAAAGCAT 57.155 26.923 20.87 20.87 38.17 3.79
5203 5773 9.935241 TTTATGCTTGTTATTTTCCAAAGCATA 57.065 25.926 19.20 19.20 37.05 3.14
5204 5774 9.935241 TTATGCTTGTTATTTTCCAAAGCATAA 57.065 25.926 25.64 25.64 40.41 1.90
5205 5775 7.650834 TGCTTGTTATTTTCCAAAGCATAAC 57.349 32.000 4.39 0.00 34.15 1.89
5206 5776 7.441017 TGCTTGTTATTTTCCAAAGCATAACT 58.559 30.769 4.39 0.00 34.50 2.24
5207 5777 7.930865 TGCTTGTTATTTTCCAAAGCATAACTT 59.069 29.630 4.39 0.00 41.70 2.66
5208 5778 8.435430 GCTTGTTATTTTCCAAAGCATAACTTC 58.565 33.333 0.00 0.00 37.75 3.01
5209 5779 8.825667 TTGTTATTTTCCAAAGCATAACTTCC 57.174 30.769 0.00 0.00 37.75 3.46
5237 5807 4.332819 AGGTTTTCAAGTCTTCTTCACACG 59.667 41.667 0.00 0.00 0.00 4.49
5238 5808 4.094442 GGTTTTCAAGTCTTCTTCACACGT 59.906 41.667 0.00 0.00 0.00 4.49
5240 5810 3.793797 TCAAGTCTTCTTCACACGTGA 57.206 42.857 25.01 0.00 37.91 4.35
5252 5822 5.529430 TCTTCACACGTGACCATGTAATTTT 59.471 36.000 25.01 0.00 39.66 1.82
5287 5858 8.642908 TCATTTGTATGTTAGTTACGAGATGG 57.357 34.615 0.00 0.00 33.34 3.51
5289 5860 4.940463 TGTATGTTAGTTACGAGATGGGC 58.060 43.478 0.00 0.00 0.00 5.36
5290 5861 4.403113 TGTATGTTAGTTACGAGATGGGCA 59.597 41.667 0.00 0.00 0.00 5.36
5291 5862 3.965379 TGTTAGTTACGAGATGGGCAA 57.035 42.857 0.00 0.00 0.00 4.52
5292 5863 3.857052 TGTTAGTTACGAGATGGGCAAG 58.143 45.455 0.00 0.00 0.00 4.01
5293 5864 3.259876 TGTTAGTTACGAGATGGGCAAGT 59.740 43.478 0.00 0.00 0.00 3.16
5294 5865 4.463539 TGTTAGTTACGAGATGGGCAAGTA 59.536 41.667 0.00 0.00 0.00 2.24
5296 5867 4.755266 AGTTACGAGATGGGCAAGTAAT 57.245 40.909 0.00 0.00 31.24 1.89
5298 5869 4.406003 AGTTACGAGATGGGCAAGTAATCT 59.594 41.667 0.00 0.00 33.36 2.40
5299 5870 5.597182 AGTTACGAGATGGGCAAGTAATCTA 59.403 40.000 0.00 0.00 30.83 1.98
5300 5871 4.323553 ACGAGATGGGCAAGTAATCTAC 57.676 45.455 0.00 0.00 30.83 2.59
5301 5872 3.961408 ACGAGATGGGCAAGTAATCTACT 59.039 43.478 0.00 0.00 41.73 2.57
5313 5884 6.258727 GCAAGTAATCTACTGCATGTGTACAT 59.741 38.462 0.00 0.00 39.39 2.29
5329 5900 4.515191 GTGTACATATTGATCGCAATGGGT 59.485 41.667 0.00 0.00 44.18 4.51
5354 5925 5.044919 AGTTACAAGATTCATCCCCATGTGA 60.045 40.000 0.00 0.00 0.00 3.58
5357 5928 4.018141 ACAAGATTCATCCCCATGTGAGAA 60.018 41.667 0.00 0.00 0.00 2.87
5358 5929 5.138276 CAAGATTCATCCCCATGTGAGAAT 58.862 41.667 0.00 0.00 0.00 2.40
5359 5930 4.726583 AGATTCATCCCCATGTGAGAATG 58.273 43.478 0.00 0.00 0.00 2.67
5361 5932 5.370584 AGATTCATCCCCATGTGAGAATGTA 59.629 40.000 0.00 0.00 0.00 2.29
5362 5933 4.422073 TCATCCCCATGTGAGAATGTAC 57.578 45.455 0.00 0.00 0.00 2.90
5433 6012 3.681473 TCGTGCTCGATGACCTGT 58.319 55.556 6.80 0.00 41.35 4.00
5531 6110 1.719780 GTTGCCGAACTTCTCGTACAG 59.280 52.381 0.00 0.00 46.65 2.74
5604 6183 4.537433 CCCAGCCCGCTAGACTGC 62.537 72.222 0.00 0.00 0.00 4.40
5605 6184 3.774528 CCAGCCCGCTAGACTGCA 61.775 66.667 0.00 0.00 0.00 4.41
5634 6221 7.611467 ACAGTCCAAATATTATCAGTGAGCAAA 59.389 33.333 0.00 0.00 0.00 3.68
5639 6226 7.358066 CAAATATTATCAGTGAGCAAAGCGAT 58.642 34.615 0.00 0.00 0.00 4.58
5640 6227 6.718454 ATATTATCAGTGAGCAAAGCGATC 57.282 37.500 0.00 0.00 0.00 3.69
5643 6230 1.134995 TCAGTGAGCAAAGCGATCGAT 60.135 47.619 21.57 10.64 0.00 3.59
5651 6238 3.562973 AGCAAAGCGATCGATGAATGATT 59.437 39.130 21.57 0.00 0.00 2.57
5657 6244 8.598075 CAAAGCGATCGATGAATGATTATCATA 58.402 33.333 21.57 0.00 35.76 2.15
5660 6247 7.434602 AGCGATCGATGAATGATTATCATACAG 59.565 37.037 21.57 0.00 35.76 2.74
5661 6248 7.221645 GCGATCGATGAATGATTATCATACAGT 59.778 37.037 21.57 0.00 35.76 3.55
5662 6249 9.722056 CGATCGATGAATGATTATCATACAGTA 57.278 33.333 10.26 0.00 35.76 2.74
5681 6269 1.855295 ACATTGCATGCATCCCAAGA 58.145 45.000 23.37 4.56 0.00 3.02
5682 6270 2.181125 ACATTGCATGCATCCCAAGAA 58.819 42.857 23.37 3.69 0.00 2.52
5948 6544 3.009115 TGGGAGCAGTAGGGGCAC 61.009 66.667 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.383774 TTTCGATCGAACATGAACACAC 57.616 40.909 29.15 0.00 33.41 3.82
57 59 1.596934 CCTTAGCCCGCAACTCTCA 59.403 57.895 0.00 0.00 0.00 3.27
94 96 7.902920 ATTTGATACAACAATGCTAATCCCT 57.097 32.000 0.00 0.00 0.00 4.20
102 104 4.031652 GTCGGCAATTTGATACAACAATGC 59.968 41.667 0.00 0.00 36.00 3.56
147 149 5.514274 TTGAAATCCCAGATAAAATCGGC 57.486 39.130 0.00 0.00 0.00 5.54
186 188 6.154534 GGTGCCAGATTTTAACCCTAAGAATT 59.845 38.462 0.00 0.00 0.00 2.17
190 192 3.699538 GGGTGCCAGATTTTAACCCTAAG 59.300 47.826 1.85 0.00 45.93 2.18
212 231 2.722201 GGGGCCTCACGTACCAGAG 61.722 68.421 0.84 2.93 0.00 3.35
213 232 2.682494 GGGGCCTCACGTACCAGA 60.682 66.667 0.84 0.00 0.00 3.86
214 233 4.143333 CGGGGCCTCACGTACCAG 62.143 72.222 1.96 0.00 0.00 4.00
215 234 3.968837 ATCGGGGCCTCACGTACCA 62.969 63.158 1.96 0.00 0.00 3.25
216 235 2.728435 AATCGGGGCCTCACGTACC 61.728 63.158 1.96 0.00 0.00 3.34
217 236 1.520787 CAATCGGGGCCTCACGTAC 60.521 63.158 1.96 0.00 0.00 3.67
218 237 1.259142 TTCAATCGGGGCCTCACGTA 61.259 55.000 1.96 0.00 0.00 3.57
219 238 2.589157 TTCAATCGGGGCCTCACGT 61.589 57.895 1.96 0.00 0.00 4.49
220 239 2.106683 GTTCAATCGGGGCCTCACG 61.107 63.158 1.96 6.02 0.00 4.35
221 240 2.106683 CGTTCAATCGGGGCCTCAC 61.107 63.158 1.96 0.00 0.00 3.51
222 241 2.267642 CGTTCAATCGGGGCCTCA 59.732 61.111 1.96 0.00 0.00 3.86
223 242 3.202706 GCGTTCAATCGGGGCCTC 61.203 66.667 0.84 0.00 0.00 4.70
224 243 4.028490 TGCGTTCAATCGGGGCCT 62.028 61.111 0.84 0.00 0.00 5.19
225 244 3.810896 GTGCGTTCAATCGGGGCC 61.811 66.667 0.00 0.00 0.00 5.80
226 245 2.322999 GATGTGCGTTCAATCGGGGC 62.323 60.000 0.00 0.00 0.00 5.80
227 246 1.024046 TGATGTGCGTTCAATCGGGG 61.024 55.000 0.00 0.00 0.00 5.73
228 247 0.801872 TTGATGTGCGTTCAATCGGG 59.198 50.000 0.00 0.00 0.00 5.14
242 261 8.019769 TGTCATGCAACAACAATTAATTGATG 57.980 30.769 30.18 28.71 43.54 3.07
244 263 8.604640 AATGTCATGCAACAACAATTAATTGA 57.395 26.923 30.18 10.05 40.87 2.57
302 327 8.744568 TGTATCATAATTTGCCATGTTCTACA 57.255 30.769 0.00 0.00 0.00 2.74
328 354 9.844790 CAAAAACAGATAGAATTGTCATGCTTA 57.155 29.630 0.00 0.00 0.00 3.09
353 379 2.885894 TGCTGAAAATGTCTGTCATGCA 59.114 40.909 0.00 0.00 36.81 3.96
359 385 7.864379 CAGATTTTTAGTGCTGAAAATGTCTGT 59.136 33.333 16.02 0.00 38.39 3.41
362 388 8.857216 CATCAGATTTTTAGTGCTGAAAATGTC 58.143 33.333 16.02 6.92 38.39 3.06
370 396 4.631377 TCCGACATCAGATTTTTAGTGCTG 59.369 41.667 0.00 0.00 0.00 4.41
502 529 2.370349 CGCCCACAACCCAATAACATA 58.630 47.619 0.00 0.00 0.00 2.29
503 530 1.181786 CGCCCACAACCCAATAACAT 58.818 50.000 0.00 0.00 0.00 2.71
545 576 2.820178 ACCAAAGAAGGCCTAAATGGG 58.180 47.619 23.23 17.41 36.00 4.00
546 577 4.040339 ACAAACCAAAGAAGGCCTAAATGG 59.960 41.667 19.76 19.76 39.35 3.16
547 578 5.213891 ACAAACCAAAGAAGGCCTAAATG 57.786 39.130 5.16 2.94 0.00 2.32
548 579 5.480422 CCTACAAACCAAAGAAGGCCTAAAT 59.520 40.000 5.16 0.00 0.00 1.40
549 580 4.830600 CCTACAAACCAAAGAAGGCCTAAA 59.169 41.667 5.16 0.00 0.00 1.85
550 581 4.105057 TCCTACAAACCAAAGAAGGCCTAA 59.895 41.667 5.16 0.00 0.00 2.69
551 582 3.653836 TCCTACAAACCAAAGAAGGCCTA 59.346 43.478 5.16 0.00 0.00 3.93
552 583 2.445525 TCCTACAAACCAAAGAAGGCCT 59.554 45.455 0.00 0.00 0.00 5.19
553 584 2.871453 TCCTACAAACCAAAGAAGGCC 58.129 47.619 0.00 0.00 0.00 5.19
554 585 5.468540 AATTCCTACAAACCAAAGAAGGC 57.531 39.130 0.00 0.00 0.00 4.35
555 586 7.049799 TGAAATTCCTACAAACCAAAGAAGG 57.950 36.000 0.00 0.00 0.00 3.46
556 587 9.846248 CTATGAAATTCCTACAAACCAAAGAAG 57.154 33.333 0.00 0.00 0.00 2.85
557 588 8.802267 CCTATGAAATTCCTACAAACCAAAGAA 58.198 33.333 0.00 0.00 0.00 2.52
558 589 8.167392 TCCTATGAAATTCCTACAAACCAAAGA 58.833 33.333 0.00 0.00 0.00 2.52
559 590 8.348285 TCCTATGAAATTCCTACAAACCAAAG 57.652 34.615 0.00 0.00 0.00 2.77
560 591 8.713708 TTCCTATGAAATTCCTACAAACCAAA 57.286 30.769 0.00 0.00 0.00 3.28
561 592 8.893563 ATTCCTATGAAATTCCTACAAACCAA 57.106 30.769 0.00 0.00 33.32 3.67
562 593 8.893563 AATTCCTATGAAATTCCTACAAACCA 57.106 30.769 0.00 0.00 33.32 3.67
563 594 9.190317 AGAATTCCTATGAAATTCCTACAAACC 57.810 33.333 0.65 0.00 33.32 3.27
613 644 6.098982 TGAACCAAATGGCTCTAAAGGAAAAA 59.901 34.615 0.00 0.00 39.32 1.94
614 645 5.600484 TGAACCAAATGGCTCTAAAGGAAAA 59.400 36.000 0.00 0.00 39.32 2.29
615 646 5.144100 TGAACCAAATGGCTCTAAAGGAAA 58.856 37.500 0.00 0.00 39.32 3.13
616 647 4.735369 TGAACCAAATGGCTCTAAAGGAA 58.265 39.130 0.00 0.00 39.32 3.36
617 648 4.380843 TGAACCAAATGGCTCTAAAGGA 57.619 40.909 0.00 0.00 39.32 3.36
618 649 5.300286 CCTATGAACCAAATGGCTCTAAAGG 59.700 44.000 0.00 2.55 39.32 3.11
619 650 6.122277 TCCTATGAACCAAATGGCTCTAAAG 58.878 40.000 0.00 0.00 39.32 1.85
620 651 6.073447 TCCTATGAACCAAATGGCTCTAAA 57.927 37.500 0.00 0.00 39.32 1.85
621 652 5.708736 TCCTATGAACCAAATGGCTCTAA 57.291 39.130 0.00 0.00 39.32 2.10
622 653 5.708736 TTCCTATGAACCAAATGGCTCTA 57.291 39.130 0.00 0.00 39.32 2.43
623 654 4.591321 TTCCTATGAACCAAATGGCTCT 57.409 40.909 0.00 0.00 39.32 4.09
624 655 4.038402 CCATTCCTATGAACCAAATGGCTC 59.962 45.833 0.00 0.00 39.77 4.70
625 656 3.962718 CCATTCCTATGAACCAAATGGCT 59.037 43.478 0.00 0.00 39.77 4.75
626 657 3.960102 TCCATTCCTATGAACCAAATGGC 59.040 43.478 7.41 0.00 43.87 4.40
627 658 6.736110 AATCCATTCCTATGAACCAAATGG 57.264 37.500 6.16 6.16 44.99 3.16
666 697 7.410120 AAAATGTGAAGGATAGGAACCAATC 57.590 36.000 0.00 0.00 0.00 2.67
668 699 9.627123 CTATAAAATGTGAAGGATAGGAACCAA 57.373 33.333 0.00 0.00 0.00 3.67
669 700 8.217799 CCTATAAAATGTGAAGGATAGGAACCA 58.782 37.037 0.00 0.00 38.72 3.67
670 701 8.437575 TCCTATAAAATGTGAAGGATAGGAACC 58.562 37.037 6.07 0.00 41.11 3.62
671 702 9.847224 TTCCTATAAAATGTGAAGGATAGGAAC 57.153 33.333 14.34 0.00 44.97 3.62
692 723 9.614792 GAGTCTAGGCTCATTTTTATTTTCCTA 57.385 33.333 19.57 0.00 35.67 2.94
693 724 8.109634 TGAGTCTAGGCTCATTTTTATTTTCCT 58.890 33.333 23.07 0.00 40.23 3.36
694 725 8.281212 TGAGTCTAGGCTCATTTTTATTTTCC 57.719 34.615 23.07 0.00 40.23 3.13
697 728 9.466497 TCATTGAGTCTAGGCTCATTTTTATTT 57.534 29.630 26.91 3.37 43.99 1.40
698 729 9.466497 TTCATTGAGTCTAGGCTCATTTTTATT 57.534 29.630 26.91 4.66 43.99 1.40
699 730 9.466497 TTTCATTGAGTCTAGGCTCATTTTTAT 57.534 29.630 26.91 14.49 43.99 1.40
700 731 8.862325 TTTCATTGAGTCTAGGCTCATTTTTA 57.138 30.769 26.91 12.75 43.99 1.52
701 732 7.765695 TTTCATTGAGTCTAGGCTCATTTTT 57.234 32.000 26.91 10.30 43.99 1.94
702 733 7.765695 TTTTCATTGAGTCTAGGCTCATTTT 57.234 32.000 26.91 12.69 43.99 1.82
703 734 7.765695 TTTTTCATTGAGTCTAGGCTCATTT 57.234 32.000 26.91 15.12 43.99 2.32
726 757 9.696917 GTCATTTAGTTCACATCAAAGGAATTT 57.303 29.630 0.00 0.00 0.00 1.82
727 758 8.859090 TGTCATTTAGTTCACATCAAAGGAATT 58.141 29.630 0.00 0.00 0.00 2.17
728 759 8.408043 TGTCATTTAGTTCACATCAAAGGAAT 57.592 30.769 0.00 0.00 0.00 3.01
729 760 7.815840 TGTCATTTAGTTCACATCAAAGGAA 57.184 32.000 0.00 0.00 0.00 3.36
730 761 7.884877 AGATGTCATTTAGTTCACATCAAAGGA 59.115 33.333 12.21 0.00 45.13 3.36
731 762 8.048534 AGATGTCATTTAGTTCACATCAAAGG 57.951 34.615 12.21 0.00 45.13 3.11
732 763 7.901889 CGAGATGTCATTTAGTTCACATCAAAG 59.098 37.037 12.21 1.44 45.13 2.77
733 764 7.387673 ACGAGATGTCATTTAGTTCACATCAAA 59.612 33.333 12.21 0.00 45.13 2.69
734 765 6.873605 ACGAGATGTCATTTAGTTCACATCAA 59.126 34.615 12.21 0.00 45.13 2.57
735 766 6.398095 ACGAGATGTCATTTAGTTCACATCA 58.602 36.000 12.21 0.00 45.13 3.07
736 767 6.893958 ACGAGATGTCATTTAGTTCACATC 57.106 37.500 3.21 3.21 43.70 3.06
737 768 7.148407 GGAAACGAGATGTCATTTAGTTCACAT 60.148 37.037 2.95 0.00 32.02 3.21
738 769 6.147164 GGAAACGAGATGTCATTTAGTTCACA 59.853 38.462 2.95 0.00 0.00 3.58
739 770 6.369065 AGGAAACGAGATGTCATTTAGTTCAC 59.631 38.462 2.95 0.74 0.00 3.18
740 771 6.464222 AGGAAACGAGATGTCATTTAGTTCA 58.536 36.000 2.95 0.00 0.00 3.18
741 772 6.969828 AGGAAACGAGATGTCATTTAGTTC 57.030 37.500 2.95 0.00 0.00 3.01
742 773 9.099454 GAATAGGAAACGAGATGTCATTTAGTT 57.901 33.333 0.00 0.00 0.00 2.24
743 774 7.711339 GGAATAGGAAACGAGATGTCATTTAGT 59.289 37.037 0.00 0.00 0.00 2.24
744 775 7.928706 AGGAATAGGAAACGAGATGTCATTTAG 59.071 37.037 0.00 0.00 0.00 1.85
745 776 7.792032 AGGAATAGGAAACGAGATGTCATTTA 58.208 34.615 0.00 0.00 0.00 1.40
746 777 6.653989 AGGAATAGGAAACGAGATGTCATTT 58.346 36.000 0.00 0.00 0.00 2.32
747 778 6.240549 AGGAATAGGAAACGAGATGTCATT 57.759 37.500 0.00 0.00 0.00 2.57
748 779 5.878406 AGGAATAGGAAACGAGATGTCAT 57.122 39.130 0.00 0.00 0.00 3.06
749 780 5.892119 AGTAGGAATAGGAAACGAGATGTCA 59.108 40.000 0.00 0.00 0.00 3.58
750 781 6.039493 TGAGTAGGAATAGGAAACGAGATGTC 59.961 42.308 0.00 0.00 0.00 3.06
751 782 5.892119 TGAGTAGGAATAGGAAACGAGATGT 59.108 40.000 0.00 0.00 0.00 3.06
752 783 6.392625 TGAGTAGGAATAGGAAACGAGATG 57.607 41.667 0.00 0.00 0.00 2.90
753 784 8.343168 CTATGAGTAGGAATAGGAAACGAGAT 57.657 38.462 0.00 0.00 0.00 2.75
754 785 7.747155 CTATGAGTAGGAATAGGAAACGAGA 57.253 40.000 0.00 0.00 0.00 4.04
773 804 8.708378 AGATGACATGTAACTCAAATCCTATGA 58.292 33.333 0.00 0.00 0.00 2.15
774 805 8.899427 AGATGACATGTAACTCAAATCCTATG 57.101 34.615 0.00 0.00 0.00 2.23
775 806 8.708378 TGAGATGACATGTAACTCAAATCCTAT 58.292 33.333 19.62 0.00 35.20 2.57
776 807 8.078060 TGAGATGACATGTAACTCAAATCCTA 57.922 34.615 19.62 3.07 35.20 2.94
777 808 6.950842 TGAGATGACATGTAACTCAAATCCT 58.049 36.000 19.62 4.18 35.20 3.24
778 809 7.798596 ATGAGATGACATGTAACTCAAATCC 57.201 36.000 23.18 1.24 40.21 3.01
781 812 9.288576 AGAAAATGAGATGACATGTAACTCAAA 57.711 29.630 23.18 9.54 40.21 2.69
782 813 8.853077 AGAAAATGAGATGACATGTAACTCAA 57.147 30.769 23.18 12.95 40.21 3.02
821 852 9.661954 GGTTCATAGGATAGGATTATCATAGGA 57.338 37.037 0.00 1.09 39.88 2.94
822 853 9.439461 TGGTTCATAGGATAGGATTATCATAGG 57.561 37.037 0.00 0.00 36.37 2.57
829 860 8.660435 CCTCTTTTGGTTCATAGGATAGGATTA 58.340 37.037 0.00 0.00 28.27 1.75
830 861 7.521669 CCTCTTTTGGTTCATAGGATAGGATT 58.478 38.462 0.00 0.00 28.27 3.01
831 862 6.466470 GCCTCTTTTGGTTCATAGGATAGGAT 60.466 42.308 0.00 0.00 28.27 3.24
832 863 5.163195 GCCTCTTTTGGTTCATAGGATAGGA 60.163 44.000 0.00 0.00 0.00 2.94
833 864 5.066593 GCCTCTTTTGGTTCATAGGATAGG 58.933 45.833 0.00 0.00 0.00 2.57
834 865 5.066593 GGCCTCTTTTGGTTCATAGGATAG 58.933 45.833 0.00 0.00 0.00 2.08
835 866 4.726825 AGGCCTCTTTTGGTTCATAGGATA 59.273 41.667 0.00 0.00 0.00 2.59
836 867 3.529319 AGGCCTCTTTTGGTTCATAGGAT 59.471 43.478 0.00 0.00 0.00 3.24
837 868 2.919602 AGGCCTCTTTTGGTTCATAGGA 59.080 45.455 0.00 0.00 0.00 2.94
838 869 3.372440 AGGCCTCTTTTGGTTCATAGG 57.628 47.619 0.00 0.00 0.00 2.57
839 870 8.697507 ATAATAAGGCCTCTTTTGGTTCATAG 57.302 34.615 5.23 0.00 34.59 2.23
840 871 9.487442 AAATAATAAGGCCTCTTTTGGTTCATA 57.513 29.630 5.23 0.00 34.59 2.15
841 872 7.978099 AATAATAAGGCCTCTTTTGGTTCAT 57.022 32.000 5.23 0.00 34.59 2.57
842 873 7.453126 TCAAATAATAAGGCCTCTTTTGGTTCA 59.547 33.333 5.23 0.00 34.59 3.18
843 874 7.759886 GTCAAATAATAAGGCCTCTTTTGGTTC 59.240 37.037 5.23 4.02 34.59 3.62
844 875 7.576856 CGTCAAATAATAAGGCCTCTTTTGGTT 60.577 37.037 5.23 0.00 34.59 3.67
845 876 6.127730 CGTCAAATAATAAGGCCTCTTTTGGT 60.128 38.462 5.23 0.00 34.59 3.67
846 877 6.265577 CGTCAAATAATAAGGCCTCTTTTGG 58.734 40.000 5.23 0.00 34.59 3.28
847 878 5.743872 GCGTCAAATAATAAGGCCTCTTTTG 59.256 40.000 5.23 11.98 34.59 2.44
848 879 5.652452 AGCGTCAAATAATAAGGCCTCTTTT 59.348 36.000 5.23 2.51 34.59 2.27
849 880 5.193679 AGCGTCAAATAATAAGGCCTCTTT 58.806 37.500 5.23 5.43 34.59 2.52
850 881 4.781934 AGCGTCAAATAATAAGGCCTCTT 58.218 39.130 5.23 5.65 37.03 2.85
851 882 4.141711 TGAGCGTCAAATAATAAGGCCTCT 60.142 41.667 5.23 0.00 0.00 3.69
852 883 4.127171 TGAGCGTCAAATAATAAGGCCTC 58.873 43.478 5.23 0.00 0.00 4.70
853 884 4.130118 CTGAGCGTCAAATAATAAGGCCT 58.870 43.478 0.00 0.00 0.00 5.19
854 885 3.251004 CCTGAGCGTCAAATAATAAGGCC 59.749 47.826 0.00 0.00 0.00 5.19
855 886 3.251004 CCCTGAGCGTCAAATAATAAGGC 59.749 47.826 0.00 0.00 0.00 4.35
856 887 3.815401 CCCCTGAGCGTCAAATAATAAGG 59.185 47.826 0.00 0.00 0.00 2.69
857 888 3.815401 CCCCCTGAGCGTCAAATAATAAG 59.185 47.826 0.00 0.00 0.00 1.73
858 889 3.815809 CCCCCTGAGCGTCAAATAATAA 58.184 45.455 0.00 0.00 0.00 1.40
859 890 2.486548 GCCCCCTGAGCGTCAAATAATA 60.487 50.000 0.00 0.00 0.00 0.98
860 891 1.750682 GCCCCCTGAGCGTCAAATAAT 60.751 52.381 0.00 0.00 0.00 1.28
861 892 0.393808 GCCCCCTGAGCGTCAAATAA 60.394 55.000 0.00 0.00 0.00 1.40
886 917 0.733150 GGTTCTCAGGCGGTTAATGC 59.267 55.000 0.00 0.00 0.00 3.56
887 918 2.107950 TGGTTCTCAGGCGGTTAATG 57.892 50.000 0.00 0.00 0.00 1.90
888 919 2.871096 TTGGTTCTCAGGCGGTTAAT 57.129 45.000 0.00 0.00 0.00 1.40
889 920 2.871096 ATTGGTTCTCAGGCGGTTAA 57.129 45.000 0.00 0.00 0.00 2.01
890 921 3.985019 TTATTGGTTCTCAGGCGGTTA 57.015 42.857 0.00 0.00 0.00 2.85
891 922 2.871096 TTATTGGTTCTCAGGCGGTT 57.129 45.000 0.00 0.00 0.00 4.44
892 923 2.871096 TTTATTGGTTCTCAGGCGGT 57.129 45.000 0.00 0.00 0.00 5.68
913 944 2.486592 CGGTCTCAGGCGGTTAATTTTT 59.513 45.455 0.00 0.00 0.00 1.94
914 945 2.081462 CGGTCTCAGGCGGTTAATTTT 58.919 47.619 0.00 0.00 0.00 1.82
915 946 1.734163 CGGTCTCAGGCGGTTAATTT 58.266 50.000 0.00 0.00 0.00 1.82
916 947 0.743345 GCGGTCTCAGGCGGTTAATT 60.743 55.000 0.00 0.00 0.00 1.40
1007 1038 0.687354 CGATTTGGGAGGGGATCGAT 59.313 55.000 0.00 0.00 42.82 3.59
1008 1039 1.407656 CCGATTTGGGAGGGGATCGA 61.408 60.000 6.20 0.00 42.82 3.59
1009 1040 1.071471 CCGATTTGGGAGGGGATCG 59.929 63.158 0.00 0.00 40.62 3.69
1034 1065 2.545596 GGTTCGCGTTTTTCCGGGT 61.546 57.895 5.77 0.00 41.07 5.28
1092 1123 2.356793 GCCATCGGAGCAGATCGG 60.357 66.667 0.00 0.00 0.00 4.18
1440 1493 1.808945 AGAAGCAAAGCACCGAATCAG 59.191 47.619 0.00 0.00 0.00 2.90
1441 1494 1.806542 GAGAAGCAAAGCACCGAATCA 59.193 47.619 0.00 0.00 0.00 2.57
1442 1495 1.131315 GGAGAAGCAAAGCACCGAATC 59.869 52.381 0.00 0.00 0.00 2.52
1618 1677 4.778415 CGCGACGAGGTCCCTGTG 62.778 72.222 0.00 0.00 0.00 3.66
1771 1830 2.111384 TGGTAGTGGAGAGGATCAAGC 58.889 52.381 0.00 0.00 37.82 4.01
1783 1844 0.602638 TTTGCAGAGCGTGGTAGTGG 60.603 55.000 0.00 0.00 0.00 4.00
1788 1849 1.951510 CACATTTGCAGAGCGTGGT 59.048 52.632 2.55 0.00 0.00 4.16
1799 1860 6.446781 AATAACCAGATGAGAGCACATTTG 57.553 37.500 0.00 0.00 33.87 2.32
1800 1861 7.568349 TCTAATAACCAGATGAGAGCACATTT 58.432 34.615 0.00 0.00 0.00 2.32
1801 1862 7.129457 TCTAATAACCAGATGAGAGCACATT 57.871 36.000 0.00 0.00 0.00 2.71
1848 1913 8.957466 GGGTATAAAACTAACAGAATCAAGCTT 58.043 33.333 0.00 0.00 0.00 3.74
1884 1949 6.207417 AGACCAACCAATCAAAATCAGTACAG 59.793 38.462 0.00 0.00 0.00 2.74
1993 2058 4.813027 CCATTTTGCTGATGGGCATATAC 58.187 43.478 5.87 0.00 42.09 1.47
2071 2136 1.398390 GTCGCAAGCTTCTTATGGGTG 59.602 52.381 0.00 0.00 37.18 4.61
2150 2215 9.743057 AAATAGATCGATGACAAGAGAACTAAG 57.257 33.333 0.54 0.00 0.00 2.18
2173 2238 0.527565 GGCGCATCAAGGACACAAAT 59.472 50.000 10.83 0.00 0.00 2.32
2182 2247 0.314935 AAAACACTGGGCGCATCAAG 59.685 50.000 10.83 2.74 0.00 3.02
2190 2262 1.611977 GTCACCCTTAAAACACTGGGC 59.388 52.381 0.00 0.00 43.25 5.36
2202 2274 3.832615 AACGAACAGTAAGTCACCCTT 57.167 42.857 0.00 0.00 37.17 3.95
2203 2275 3.832615 AAACGAACAGTAAGTCACCCT 57.167 42.857 0.00 0.00 0.00 4.34
2207 2279 7.645340 GTCTTACACTAAACGAACAGTAAGTCA 59.355 37.037 0.00 0.00 39.39 3.41
2208 2280 7.645340 TGTCTTACACTAAACGAACAGTAAGTC 59.355 37.037 0.00 0.00 39.39 3.01
2285 2363 1.164041 AAGTCGCCCGGAAAACACTG 61.164 55.000 0.73 0.00 0.00 3.66
2300 2378 9.392021 GTGTCTTACACTAAACTACAGTAAGTC 57.608 37.037 0.00 0.00 45.27 3.01
2317 2395 7.041721 CCTTCACTATTAGCATGTGTCTTACA 58.958 38.462 0.00 0.00 44.87 2.41
2318 2396 6.480320 CCCTTCACTATTAGCATGTGTCTTAC 59.520 42.308 0.00 0.00 33.82 2.34
2328 2408 4.620723 TCCTTCTCCCTTCACTATTAGCA 58.379 43.478 0.00 0.00 0.00 3.49
2337 2417 3.775316 GACCTAACATCCTTCTCCCTTCA 59.225 47.826 0.00 0.00 0.00 3.02
2352 2432 6.127140 ACACCTGTAATGAGTATGGACCTAAC 60.127 42.308 0.00 0.00 0.00 2.34
2353 2433 5.962031 ACACCTGTAATGAGTATGGACCTAA 59.038 40.000 0.00 0.00 0.00 2.69
2390 2471 4.493547 CCGTCAATGCCATTATTGTTTGT 58.506 39.130 0.00 0.00 38.77 2.83
2411 2492 3.565482 TGAAGGCTCGAATGAATATTGCC 59.435 43.478 0.00 0.00 34.65 4.52
2428 2509 7.011857 GCTCTATTTCTTACAAGGACATGAAGG 59.988 40.741 0.00 0.00 0.00 3.46
2453 2539 3.837213 TTGCTGCTAAGAAACATCTGC 57.163 42.857 0.00 0.00 0.00 4.26
2527 2613 5.629097 CGGATAGTTATCGGTGTACATCTC 58.371 45.833 4.28 0.00 33.52 2.75
2536 2622 2.288273 GCTCTTGCGGATAGTTATCGGT 60.288 50.000 8.05 0.00 35.99 4.69
2537 2623 2.288213 TGCTCTTGCGGATAGTTATCGG 60.288 50.000 3.18 3.18 43.34 4.18
2556 2642 1.494824 CCACTGCTTTGCTTCTTTGC 58.505 50.000 0.00 0.00 0.00 3.68
2557 2643 1.202440 TGCCACTGCTTTGCTTCTTTG 60.202 47.619 0.00 0.00 38.71 2.77
2558 2644 1.113788 TGCCACTGCTTTGCTTCTTT 58.886 45.000 0.00 0.00 38.71 2.52
2559 2645 0.386838 GTGCCACTGCTTTGCTTCTT 59.613 50.000 0.00 0.00 38.71 2.52
2560 2646 0.466922 AGTGCCACTGCTTTGCTTCT 60.467 50.000 0.00 0.00 38.71 2.85
2561 2647 0.386838 AAGTGCCACTGCTTTGCTTC 59.613 50.000 0.00 0.00 38.71 3.86
2562 2648 1.338020 GTAAGTGCCACTGCTTTGCTT 59.662 47.619 0.00 0.00 38.71 3.91
2590 2676 2.158608 AGGAAGCAAGTTAGTGGCAAGT 60.159 45.455 0.00 0.00 0.00 3.16
2614 2700 3.501062 GCCACAAGAAAGTTACCTACCAC 59.499 47.826 0.00 0.00 0.00 4.16
2615 2701 3.393278 AGCCACAAGAAAGTTACCTACCA 59.607 43.478 0.00 0.00 0.00 3.25
2689 2776 3.388024 AGGCCGCATTCTTTCATAGTCTA 59.612 43.478 0.00 0.00 0.00 2.59
2693 2780 2.292267 ACAGGCCGCATTCTTTCATAG 58.708 47.619 0.00 0.00 0.00 2.23
2767 2854 3.916761 TCACACCTAACATAACACGACC 58.083 45.455 0.00 0.00 0.00 4.79
2948 3080 7.800380 CACAAAAGCAACTAGTTTACATGAGAG 59.200 37.037 5.07 0.00 0.00 3.20
2949 3081 7.497579 TCACAAAAGCAACTAGTTTACATGAGA 59.502 33.333 5.07 3.75 0.00 3.27
2972 3104 6.566197 AAGAAACTGGACTCATTCAATCAC 57.434 37.500 0.00 0.00 0.00 3.06
3269 3439 9.149225 CTCTACCTATCATTAGCAATTGATGAC 57.851 37.037 10.34 0.00 34.96 3.06
3271 3441 7.065563 GCCTCTACCTATCATTAGCAATTGATG 59.934 40.741 10.34 4.42 0.00 3.07
3308 3542 5.079643 ACCCACTGCATAAAGAAAATGACT 58.920 37.500 0.00 0.00 0.00 3.41
3383 3653 1.179152 CATGAACATGCAGCCTTCCA 58.821 50.000 1.84 0.00 31.39 3.53
3404 3674 1.026718 CAACTTCGGAGATGCCCCAC 61.027 60.000 0.00 0.00 35.04 4.61
3475 3753 3.324556 AGTGCCCAAATGTGCAATTAACT 59.675 39.130 0.00 0.00 39.57 2.24
3691 4042 9.739276 ACAATCACATCTAACCAAGAATTTAGA 57.261 29.630 0.00 0.00 37.89 2.10
3742 4132 5.416271 ACCTCCGCAAATAAAGAGAGTAA 57.584 39.130 0.00 0.00 0.00 2.24
3743 4133 4.142004 GGACCTCCGCAAATAAAGAGAGTA 60.142 45.833 0.00 0.00 0.00 2.59
3744 4134 3.369576 GGACCTCCGCAAATAAAGAGAGT 60.370 47.826 0.00 0.00 0.00 3.24
3745 4135 3.118592 AGGACCTCCGCAAATAAAGAGAG 60.119 47.826 0.00 0.00 42.08 3.20
3746 4136 2.838202 AGGACCTCCGCAAATAAAGAGA 59.162 45.455 0.00 0.00 42.08 3.10
3747 4137 3.118592 AGAGGACCTCCGCAAATAAAGAG 60.119 47.826 18.32 0.00 42.08 2.85
3748 4138 2.838202 AGAGGACCTCCGCAAATAAAGA 59.162 45.455 18.32 0.00 42.08 2.52
3749 4139 3.268023 AGAGGACCTCCGCAAATAAAG 57.732 47.619 18.32 0.00 42.08 1.85
3750 4140 3.713826 AAGAGGACCTCCGCAAATAAA 57.286 42.857 18.32 0.00 42.08 1.40
3751 4141 3.713826 AAAGAGGACCTCCGCAAATAA 57.286 42.857 18.32 0.00 42.08 1.40
3752 4142 3.713826 AAAAGAGGACCTCCGCAAATA 57.286 42.857 18.32 0.00 42.08 1.40
3753 4143 2.586648 AAAAGAGGACCTCCGCAAAT 57.413 45.000 18.32 0.00 42.08 2.32
3754 4144 2.370849 AGTAAAAGAGGACCTCCGCAAA 59.629 45.455 18.32 0.00 42.08 3.68
3755 4145 1.975680 AGTAAAAGAGGACCTCCGCAA 59.024 47.619 18.32 0.00 42.08 4.85
3756 4146 1.640917 AGTAAAAGAGGACCTCCGCA 58.359 50.000 18.32 0.00 42.08 5.69
3757 4147 2.764439 AAGTAAAAGAGGACCTCCGC 57.236 50.000 18.32 4.31 42.08 5.54
3758 4148 8.782339 TTAAAATAAGTAAAAGAGGACCTCCG 57.218 34.615 18.32 0.00 42.08 4.63
4143 4533 8.768397 TCAGTTGATATAAGAACCTTGGTGTAT 58.232 33.333 0.00 0.00 0.00 2.29
4228 4618 9.535878 GGAAAATTTATACTGGTGTGTCAAAAA 57.464 29.630 0.00 0.00 0.00 1.94
4229 4619 8.919145 AGGAAAATTTATACTGGTGTGTCAAAA 58.081 29.630 0.00 0.00 0.00 2.44
4231 4621 9.005777 GTAGGAAAATTTATACTGGTGTGTCAA 57.994 33.333 0.00 0.00 0.00 3.18
4232 4622 8.380099 AGTAGGAAAATTTATACTGGTGTGTCA 58.620 33.333 8.90 0.00 0.00 3.58
4233 4623 8.788325 AGTAGGAAAATTTATACTGGTGTGTC 57.212 34.615 8.90 0.00 0.00 3.67
4267 4663 5.265989 TGACCAGGTTAACCTTTCAAAGTT 58.734 37.500 24.99 0.40 46.09 2.66
4268 4664 4.862371 TGACCAGGTTAACCTTTCAAAGT 58.138 39.130 24.99 14.25 46.09 2.66
4301 4697 9.020731 TCTCTCGTATTATACTTGATTGGCATA 57.979 33.333 0.69 0.00 0.00 3.14
4373 4769 0.535553 TACCTTTTCGGCCAAAGCGT 60.536 50.000 2.24 8.85 41.24 5.07
4400 4796 6.635030 TGGTGTATGTACATAGACTGCTAG 57.365 41.667 30.96 0.00 37.61 3.42
4403 4802 6.049149 ACAATGGTGTATGTACATAGACTGC 58.951 40.000 30.96 20.82 37.61 4.40
4447 4933 5.372373 TCAACACCATTAATGTCTGTCACA 58.628 37.500 14.25 1.37 40.18 3.58
4469 4955 5.147767 ACCCCAAGCCATTTAATTCCTATC 58.852 41.667 0.00 0.00 0.00 2.08
4492 4978 6.889177 TGATAACAGGTTCAATCTGCCATTAA 59.111 34.615 0.00 0.00 35.78 1.40
4582 5069 0.468226 AGACTGGTTCTGCCGACAAA 59.532 50.000 0.00 0.00 41.21 2.83
4687 5180 1.335872 GGAACAAACAACATGAGGCCG 60.336 52.381 0.00 0.00 0.00 6.13
4723 5219 8.378565 TCAAGAAATAGGAGATCACAACTTCTT 58.621 33.333 0.00 0.00 32.34 2.52
4753 5249 7.729116 ACACAATCAAAGGAAATCAATTGACT 58.271 30.769 11.07 0.00 34.88 3.41
4766 5262 9.811995 ATGATAAATCATGAACACAATCAAAGG 57.188 29.630 0.00 0.00 45.27 3.11
4792 5288 9.330063 TGGCATAACAAAATGTATGTTTCAAAA 57.670 25.926 0.00 0.00 41.11 2.44
4804 5339 7.037438 AGCTGATAAACTGGCATAACAAAATG 58.963 34.615 0.00 0.00 0.00 2.32
5015 5561 2.420022 CTCAAGTAAACCCGCATCCTTG 59.580 50.000 0.00 0.00 0.00 3.61
5062 5613 1.937223 TGGCAACATAATCGCGGTAAG 59.063 47.619 6.13 0.00 46.17 2.34
5063 5614 2.025589 TGGCAACATAATCGCGGTAA 57.974 45.000 6.13 0.00 46.17 2.85
5064 5615 3.762674 TGGCAACATAATCGCGGTA 57.237 47.368 6.13 0.00 46.17 4.02
5088 5650 4.518970 TCATCTGGTACAAAAGAACCAAGC 59.481 41.667 0.00 0.00 44.92 4.01
5111 5678 4.908601 TCCACATAACTCCAGACACAAT 57.091 40.909 0.00 0.00 0.00 2.71
5126 5693 6.594744 TGTATCAGCTCAACATAATCCACAT 58.405 36.000 0.00 0.00 0.00 3.21
5148 5715 4.780021 ACACTCCCTCATAGAATTCACTGT 59.220 41.667 8.44 0.00 0.00 3.55
5150 5717 4.407296 GGACACTCCCTCATAGAATTCACT 59.593 45.833 8.44 0.00 0.00 3.41
5151 5718 4.162320 TGGACACTCCCTCATAGAATTCAC 59.838 45.833 8.44 0.00 35.03 3.18
5175 5744 7.930865 TGCTTTGGAAAATAACAAGCATAAAGT 59.069 29.630 0.81 0.00 31.10 2.66
5176 5745 8.309163 TGCTTTGGAAAATAACAAGCATAAAG 57.691 30.769 0.81 0.00 31.10 1.85
5185 5755 8.189119 AGGAAGTTATGCTTTGGAAAATAACA 57.811 30.769 7.05 0.00 37.76 2.41
5197 5767 6.323739 TGAAAACCTCAAAGGAAGTTATGCTT 59.676 34.615 0.00 0.00 42.14 3.91
5198 5768 5.833131 TGAAAACCTCAAAGGAAGTTATGCT 59.167 36.000 0.00 0.00 37.67 3.79
5199 5769 6.084326 TGAAAACCTCAAAGGAAGTTATGC 57.916 37.500 0.00 0.00 37.67 3.14
5200 5770 7.716612 ACTTGAAAACCTCAAAGGAAGTTATG 58.283 34.615 0.00 0.00 43.54 1.90
5201 5771 7.780271 AGACTTGAAAACCTCAAAGGAAGTTAT 59.220 33.333 0.00 0.00 43.54 1.89
5202 5772 7.116736 AGACTTGAAAACCTCAAAGGAAGTTA 58.883 34.615 0.00 0.00 43.54 2.24
5203 5773 5.952347 AGACTTGAAAACCTCAAAGGAAGTT 59.048 36.000 0.00 0.00 43.54 2.66
5204 5774 5.510430 AGACTTGAAAACCTCAAAGGAAGT 58.490 37.500 0.00 0.00 43.54 3.01
5205 5775 6.319911 AGAAGACTTGAAAACCTCAAAGGAAG 59.680 38.462 0.00 0.00 43.54 3.46
5206 5776 6.187682 AGAAGACTTGAAAACCTCAAAGGAA 58.812 36.000 0.00 0.00 43.54 3.36
5207 5777 5.755849 AGAAGACTTGAAAACCTCAAAGGA 58.244 37.500 0.00 0.00 43.54 3.36
5208 5778 6.095440 TGAAGAAGACTTGAAAACCTCAAAGG 59.905 38.462 0.00 0.00 43.54 3.11
5209 5779 6.969473 GTGAAGAAGACTTGAAAACCTCAAAG 59.031 38.462 0.00 0.00 43.54 2.77
5276 5847 4.694339 AGATTACTTGCCCATCTCGTAAC 58.306 43.478 0.00 0.00 0.00 2.50
5279 5850 3.961408 AGTAGATTACTTGCCCATCTCGT 59.039 43.478 0.00 0.00 34.86 4.18
5280 5851 4.302455 CAGTAGATTACTTGCCCATCTCG 58.698 47.826 0.00 0.00 36.76 4.04
5282 5853 3.455910 TGCAGTAGATTACTTGCCCATCT 59.544 43.478 0.00 0.00 36.76 2.90
5283 5854 3.808728 TGCAGTAGATTACTTGCCCATC 58.191 45.455 0.00 0.00 36.76 3.51
5287 5858 3.941483 ACACATGCAGTAGATTACTTGCC 59.059 43.478 0.00 0.00 36.76 4.52
5289 5860 7.776933 ATGTACACATGCAGTAGATTACTTG 57.223 36.000 0.00 0.00 34.13 3.16
5291 5862 9.481340 CAATATGTACACATGCAGTAGATTACT 57.519 33.333 11.97 0.00 36.98 2.24
5292 5863 9.476202 TCAATATGTACACATGCAGTAGATTAC 57.524 33.333 11.97 0.00 37.15 1.89
5294 5865 9.212641 GATCAATATGTACACATGCAGTAGATT 57.787 33.333 11.97 5.07 37.15 2.40
5296 5867 6.863126 CGATCAATATGTACACATGCAGTAGA 59.137 38.462 0.00 0.00 37.15 2.59
5298 5869 5.405269 GCGATCAATATGTACACATGCAGTA 59.595 40.000 0.00 0.00 37.15 2.74
5299 5870 4.212004 GCGATCAATATGTACACATGCAGT 59.788 41.667 0.00 0.00 37.15 4.40
5300 5871 4.211794 TGCGATCAATATGTACACATGCAG 59.788 41.667 0.00 0.00 37.15 4.41
5301 5872 4.125703 TGCGATCAATATGTACACATGCA 58.874 39.130 0.00 0.00 37.15 3.96
5313 5884 5.919755 TGTAACTACCCATTGCGATCAATA 58.080 37.500 0.00 0.00 40.74 1.90
5329 5900 6.157820 TCACATGGGGATGAATCTTGTAACTA 59.842 38.462 0.00 0.00 0.00 2.24
5354 5925 9.507329 AGTTACACAAGAAATCATGTACATTCT 57.493 29.630 5.37 4.57 33.73 2.40
5357 5928 8.939929 CAGAGTTACACAAGAAATCATGTACAT 58.060 33.333 1.41 1.41 0.00 2.29
5358 5929 7.931407 ACAGAGTTACACAAGAAATCATGTACA 59.069 33.333 0.00 0.00 0.00 2.90
5359 5930 8.311650 ACAGAGTTACACAAGAAATCATGTAC 57.688 34.615 0.00 0.00 0.00 2.90
5361 5932 7.255242 CCAACAGAGTTACACAAGAAATCATGT 60.255 37.037 0.00 0.00 0.00 3.21
5362 5933 7.080099 CCAACAGAGTTACACAAGAAATCATG 58.920 38.462 0.00 0.00 0.00 3.07
5401 5978 1.597663 GCACGACAACTTGTAACTGCT 59.402 47.619 0.00 0.00 0.00 4.24
5604 6183 6.823182 TCACTGATAATATTTGGACTGTGGTG 59.177 38.462 0.00 0.00 0.00 4.17
5605 6184 6.957631 TCACTGATAATATTTGGACTGTGGT 58.042 36.000 0.00 0.00 0.00 4.16
5611 6198 6.914757 GCTTTGCTCACTGATAATATTTGGAC 59.085 38.462 0.00 0.00 0.00 4.02
5612 6199 6.238456 CGCTTTGCTCACTGATAATATTTGGA 60.238 38.462 0.00 0.00 0.00 3.53
5616 6203 6.128715 CGATCGCTTTGCTCACTGATAATATT 60.129 38.462 0.26 0.00 0.00 1.28
5621 6208 2.099098 TCGATCGCTTTGCTCACTGATA 59.901 45.455 11.09 0.00 0.00 2.15
5634 6221 7.260603 TGTATGATAATCATTCATCGATCGCT 58.739 34.615 11.09 0.00 38.26 4.93
5643 6230 9.558396 TGCAATGTACTGTATGATAATCATTCA 57.442 29.630 0.00 0.00 38.26 2.57
5664 6251 2.417651 CGTTTCTTGGGATGCATGCAAT 60.418 45.455 26.68 13.38 0.00 3.56
5665 6252 1.067706 CGTTTCTTGGGATGCATGCAA 60.068 47.619 26.68 5.71 0.00 4.08
5668 6256 2.728846 CGTTCGTTTCTTGGGATGCATG 60.729 50.000 2.46 0.00 0.00 4.06
5681 6269 0.102844 TCGACCAGGTTCGTTCGTTT 59.897 50.000 0.00 0.00 40.07 3.60
5682 6270 0.316204 ATCGACCAGGTTCGTTCGTT 59.684 50.000 0.00 0.00 40.07 3.85
5778 6371 2.290577 ACACCATCCTCAAGAAGAAGGC 60.291 50.000 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.