Multiple sequence alignment - TraesCS4A01G025400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G025400 chr4A 100.000 5056 0 0 1 5056 17484882 17479827 0.000000e+00 9337.0
1 TraesCS4A01G025400 chr4D 93.403 1440 52 17 516 1931 449201175 449202595 0.000000e+00 2093.0
2 TraesCS4A01G025400 chr4D 92.143 1400 96 8 2996 4389 449203656 449205047 0.000000e+00 1964.0
3 TraesCS4A01G025400 chr4D 95.057 526 14 8 1 517 449200616 449201138 0.000000e+00 817.0
4 TraesCS4A01G025400 chr4D 89.450 218 19 4 4607 4821 449205729 449205945 6.450000e-69 272.0
5 TraesCS4A01G025400 chr4D 92.000 175 9 2 4443 4616 449205091 449205261 1.820000e-59 241.0
6 TraesCS4A01G025400 chr4D 89.349 169 13 4 2386 2552 449203042 449203207 1.840000e-49 207.0
7 TraesCS4A01G025400 chr4D 84.324 185 22 6 4819 5003 449233037 449233214 1.870000e-39 174.0
8 TraesCS4A01G025400 chr4D 88.710 124 10 3 2197 2320 449202902 449203021 1.130000e-31 148.0
9 TraesCS4A01G025400 chr4D 88.983 118 10 2 1933 2050 449202642 449202756 5.280000e-30 143.0
10 TraesCS4A01G025400 chr4D 88.889 72 5 3 2141 2210 449202883 449202953 9.020000e-13 86.1
11 TraesCS4A01G025400 chr4D 94.444 36 1 1 4376 4411 449205067 449205101 3.000000e-03 54.7
12 TraesCS4A01G025400 chr4B 91.506 1401 105 9 2996 4389 561591183 561592576 0.000000e+00 1916.0
13 TraesCS4A01G025400 chr4B 92.807 1140 38 19 516 1628 561588663 561589785 0.000000e+00 1611.0
14 TraesCS4A01G025400 chr4B 95.181 415 13 3 1 414 561587868 561588276 0.000000e+00 649.0
15 TraesCS4A01G025400 chr4B 89.817 383 28 5 4443 4821 561592620 561592995 9.840000e-132 481.0
16 TraesCS4A01G025400 chr4B 95.946 296 9 2 1627 1921 561589826 561590119 1.270000e-130 477.0
17 TraesCS4A01G025400 chr4B 85.852 311 27 10 2620 2915 561590876 561591184 1.060000e-81 315.0
18 TraesCS4A01G025400 chr4B 88.690 168 15 3 2386 2552 561590576 561590740 8.580000e-48 202.0
19 TraesCS4A01G025400 chr4B 84.324 185 22 6 4819 5003 561594263 561594440 1.870000e-39 174.0
20 TraesCS4A01G025400 chr4B 89.683 126 9 3 2197 2320 561590432 561590555 1.880000e-34 158.0
21 TraesCS4A01G025400 chr4B 89.831 118 9 2 1933 2050 561590173 561590287 1.130000e-31 148.0
22 TraesCS4A01G025400 chr4B 90.909 99 8 1 1287 1385 23323439 23323536 1.140000e-26 132.0
23 TraesCS4A01G025400 chr4B 88.889 72 5 3 2141 2210 561590413 561590483 9.020000e-13 86.1
24 TraesCS4A01G025400 chr4B 96.875 32 1 0 4380 4411 561592599 561592630 3.000000e-03 54.7
25 TraesCS4A01G025400 chr1A 84.945 631 61 17 1004 1602 492271806 492272434 4.330000e-170 608.0
26 TraesCS4A01G025400 chr1A 88.824 170 16 2 1750 1919 492272520 492272686 6.640000e-49 206.0
27 TraesCS4A01G025400 chr1A 86.598 97 10 3 2914 3008 474384748 474384843 2.490000e-18 104.0
28 TraesCS4A01G025400 chr1D 84.430 623 63 13 1012 1602 392949740 392949120 2.620000e-162 582.0
29 TraesCS4A01G025400 chr1D 89.412 170 15 2 1750 1919 392949043 392948877 1.430000e-50 211.0
30 TraesCS4A01G025400 chr1D 81.410 156 27 2 3416 3570 223387594 223387440 5.310000e-25 126.0
31 TraesCS4A01G025400 chr1B 83.544 632 74 10 1003 1604 529705132 529705763 9.500000e-157 564.0
32 TraesCS4A01G025400 chr1B 82.808 349 57 3 3747 4095 529706088 529706433 4.920000e-80 309.0
33 TraesCS4A01G025400 chr1B 92.258 155 12 0 1765 1919 529705840 529705994 2.370000e-53 220.0
34 TraesCS4A01G025400 chr1B 86.316 95 8 5 2905 2997 106864728 106864819 1.160000e-16 99.0
35 TraesCS4A01G025400 chr1B 85.263 95 9 5 2905 2997 106875619 106875710 5.390000e-15 93.5
36 TraesCS4A01G025400 chr5B 80.972 247 42 5 3364 3606 89303328 89303083 1.860000e-44 191.0
37 TraesCS4A01G025400 chr7D 79.339 242 47 3 3364 3603 432936969 432937209 3.130000e-37 167.0
38 TraesCS4A01G025400 chr7D 76.448 259 47 10 3361 3606 154533261 154533004 1.480000e-25 128.0
39 TraesCS4A01G025400 chr2D 77.733 247 49 5 3358 3599 20665613 20665858 4.080000e-31 147.0
40 TraesCS4A01G025400 chr2D 86.364 88 12 0 2910 2997 474738292 474738379 4.170000e-16 97.1
41 TraesCS4A01G025400 chr2B 77.869 244 49 5 3362 3603 33911028 33911268 4.080000e-31 147.0
42 TraesCS4A01G025400 chr7B 88.525 122 11 1 1334 1452 51909961 51910082 1.470000e-30 145.0
43 TraesCS4A01G025400 chr7B 86.667 90 10 2 2914 3001 72609120 72609209 1.160000e-16 99.0
44 TraesCS4A01G025400 chr7B 86.905 84 11 0 2914 2997 705867443 705867526 1.500000e-15 95.3
45 TraesCS4A01G025400 chr2A 81.111 180 31 3 3361 3538 706570487 706570665 1.900000e-29 141.0
46 TraesCS4A01G025400 chr2A 85.484 62 9 0 3473 3534 765095732 765095793 1.170000e-06 65.8
47 TraesCS4A01G025400 chr3D 85.496 131 14 2 3363 3492 4960524 4960650 1.140000e-26 132.0
48 TraesCS4A01G025400 chr3D 86.364 88 9 3 2912 2997 500043996 500043910 5.390000e-15 93.5
49 TraesCS4A01G025400 chr5D 91.667 84 6 1 2914 2996 554366992 554366909 1.150000e-21 115.0
50 TraesCS4A01G025400 chrUn 88.235 85 9 1 2914 2997 42479324 42479240 3.220000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G025400 chr4A 17479827 17484882 5055 True 9337.000000 9337 100.000000 1 5056 1 chr4A.!!$R1 5055
1 TraesCS4A01G025400 chr4D 449200616 449205945 5329 False 602.580000 2093 91.242800 1 4821 10 chr4D.!!$F2 4820
2 TraesCS4A01G025400 chr4B 561587868 561594440 6572 False 522.650000 1916 90.783417 1 5003 12 chr4B.!!$F2 5002
3 TraesCS4A01G025400 chr1A 492271806 492272686 880 False 407.000000 608 86.884500 1004 1919 2 chr1A.!!$F2 915
4 TraesCS4A01G025400 chr1D 392948877 392949740 863 True 396.500000 582 86.921000 1012 1919 2 chr1D.!!$R2 907
5 TraesCS4A01G025400 chr1B 529705132 529706433 1301 False 364.333333 564 86.203333 1003 4095 3 chr1B.!!$F3 3092

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
560 896 0.318762 GAGAGACGGACAGGTGCTTT 59.681 55.0 0.00 0.00 0.00 3.51 F
1992 2516 0.109272 GATGTGAGTCGTTCCGCTCA 60.109 55.0 6.65 6.65 37.55 4.26 F
2306 2831 1.393603 TCATAGGTGTCTGGAGCGAG 58.606 55.0 0.00 0.00 0.00 5.03 F
3586 4213 1.534729 CCTACACAACCCTTTCCAGC 58.465 55.0 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2297 2821 0.034059 ACAAACTCACCTCGCTCCAG 59.966 55.000 0.0 0.0 0.00 3.86 R
3370 3991 0.675837 GCCGGTGTACTCCCCTTTTC 60.676 60.000 1.9 0.0 0.00 2.29 R
3731 4362 1.409427 GCCTGTACGATAGAGCAAGGT 59.591 52.381 0.0 0.0 41.38 3.50 R
4411 5074 0.107703 CACACCCACGCCAGTATGAT 60.108 55.000 0.0 0.0 39.69 2.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 6.942532 TGCAATTGTCTTCTTCTTTGTACT 57.057 33.333 7.40 0.00 0.00 2.73
110 111 2.431782 GTTTGATATTGGTGCCTGGCAT 59.568 45.455 26.22 11.42 41.91 4.40
310 312 4.342862 AGGTGTGTCTGATGCCATATAC 57.657 45.455 0.00 0.00 0.00 1.47
311 313 3.969976 AGGTGTGTCTGATGCCATATACT 59.030 43.478 0.00 0.00 0.00 2.12
312 314 5.147767 AGGTGTGTCTGATGCCATATACTA 58.852 41.667 0.00 0.00 0.00 1.82
403 405 3.515104 TCATGCATGTGTCAGGTAGAGAA 59.485 43.478 25.43 0.00 0.00 2.87
433 435 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
434 436 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
456 458 4.222336 AGAGAGAGAGAGAGAGAGAGAGG 58.778 52.174 0.00 0.00 0.00 3.69
463 465 5.407049 AGAGAGAGAGAGAGAGGTAGCTAT 58.593 45.833 0.00 0.00 0.00 2.97
464 466 6.562228 AGAGAGAGAGAGAGAGGTAGCTATA 58.438 44.000 0.00 0.00 0.00 1.31
465 467 6.665680 AGAGAGAGAGAGAGAGGTAGCTATAG 59.334 46.154 0.00 0.00 0.00 1.31
466 468 5.187967 AGAGAGAGAGAGAGGTAGCTATAGC 59.812 48.000 17.33 17.33 42.49 2.97
467 469 4.844085 AGAGAGAGAGAGGTAGCTATAGCA 59.156 45.833 26.07 9.86 45.16 3.49
486 498 3.126514 AGCATGAGTTTGAAAGATGCTCG 59.873 43.478 11.26 0.00 45.10 5.03
494 506 2.596452 TGAAAGATGCTCGAAGTCGAC 58.404 47.619 7.70 7.70 44.22 4.20
519 855 7.093377 ACGTACAACTATCATTAACCCTTACCA 60.093 37.037 0.00 0.00 0.00 3.25
560 896 0.318762 GAGAGACGGACAGGTGCTTT 59.681 55.000 0.00 0.00 0.00 3.51
641 977 6.182627 ACCTGAGAAAGTGCATTGATGATAA 58.817 36.000 0.00 0.00 0.00 1.75
669 1006 7.611467 AGTTGAAGGATAAAGTGTGATTGCATA 59.389 33.333 0.00 0.00 0.00 3.14
685 1022 4.963276 TGCATATCGAAGAAAAAGTGGG 57.037 40.909 0.00 0.00 43.58 4.61
687 1024 5.192927 TGCATATCGAAGAAAAAGTGGGAT 58.807 37.500 0.00 0.00 43.58 3.85
690 1027 2.857483 TCGAAGAAAAAGTGGGATGCA 58.143 42.857 0.00 0.00 0.00 3.96
692 1029 2.095059 CGAAGAAAAAGTGGGATGCAGG 60.095 50.000 0.00 0.00 0.00 4.85
699 1036 0.682209 AGTGGGATGCAGGTGAATGC 60.682 55.000 0.00 0.00 46.68 3.56
735 1072 8.096414 CACCACATTCCACATGACATATATAGA 58.904 37.037 0.00 0.00 0.00 1.98
737 1074 9.676861 CCACATTCCACATGACATATATAGATT 57.323 33.333 0.00 0.00 0.00 2.40
742 1079 9.933723 TTCCACATGACATATATAGATTGACAG 57.066 33.333 0.00 0.00 0.00 3.51
744 1081 9.363763 CCACATGACATATATAGATTGACAGTC 57.636 37.037 0.00 0.00 0.00 3.51
749 1097 6.625362 ACATATATAGATTGACAGTCAGGCG 58.375 40.000 2.82 0.00 0.00 5.52
767 1115 1.282248 CGGTTCGACGCTGTGAATGT 61.282 55.000 0.00 0.00 0.00 2.71
785 1133 7.298122 GTGAATGTCACATGTATCTTTCGTTT 58.702 34.615 0.00 0.00 46.22 3.60
787 1135 5.605564 TGTCACATGTATCTTTCGTTTGG 57.394 39.130 0.00 0.00 0.00 3.28
788 1136 5.301555 TGTCACATGTATCTTTCGTTTGGA 58.698 37.500 0.00 0.00 0.00 3.53
789 1137 5.178623 TGTCACATGTATCTTTCGTTTGGAC 59.821 40.000 0.00 0.00 0.00 4.02
790 1138 5.408604 GTCACATGTATCTTTCGTTTGGACT 59.591 40.000 0.00 0.00 0.00 3.85
791 1139 5.995282 TCACATGTATCTTTCGTTTGGACTT 59.005 36.000 0.00 0.00 0.00 3.01
792 1140 6.073276 TCACATGTATCTTTCGTTTGGACTTG 60.073 38.462 0.00 0.00 0.00 3.16
801 1156 5.883503 TTCGTTTGGACTTGTACTTTTGT 57.116 34.783 0.00 0.00 0.00 2.83
828 1183 1.000731 CGTTTTGCCCATGTTGACCAT 59.999 47.619 0.00 0.00 0.00 3.55
868 1226 7.853437 CCTCTTTACGCGATCTACTATATGATG 59.147 40.741 15.93 0.00 0.00 3.07
873 1231 7.787725 ACGCGATCTACTATATGATGTATGA 57.212 36.000 15.93 0.00 0.00 2.15
874 1232 8.384607 ACGCGATCTACTATATGATGTATGAT 57.615 34.615 15.93 0.00 0.00 2.45
875 1233 9.490379 ACGCGATCTACTATATGATGTATGATA 57.510 33.333 15.93 0.00 0.00 2.15
989 1356 0.618981 ACCATTCTTTCGACCCCTCC 59.381 55.000 0.00 0.00 0.00 4.30
1053 1426 0.622154 TCCTCCTCCTCGTCTCCTCT 60.622 60.000 0.00 0.00 0.00 3.69
1602 1999 0.179092 TCATCTCGCAGGTGCTGATG 60.179 55.000 19.83 19.83 43.81 3.07
1603 2000 1.523258 ATCTCGCAGGTGCTGATGC 60.523 57.895 0.00 0.00 39.32 3.91
1604 2001 1.969200 ATCTCGCAGGTGCTGATGCT 61.969 55.000 0.00 0.00 40.34 3.79
1605 2002 2.435410 TCGCAGGTGCTGATGCTG 60.435 61.111 0.00 0.00 40.34 4.41
1606 2003 2.435410 CGCAGGTGCTGATGCTGA 60.435 61.111 0.00 0.00 40.34 4.26
1607 2004 1.818363 CGCAGGTGCTGATGCTGAT 60.818 57.895 0.00 0.00 40.34 2.90
1647 2124 9.755064 CATACTAGTTGTAACTAAATTGTGCAC 57.245 33.333 10.75 10.75 40.70 4.57
1664 2141 2.177531 CGCATCAAGGCTGTGTGC 59.822 61.111 7.86 7.86 41.94 4.57
1665 2142 2.619165 CGCATCAAGGCTGTGTGCA 61.619 57.895 15.49 0.00 45.15 4.57
1700 2178 5.184864 CGACTGAGATTTAGGCTCCTATCAT 59.815 44.000 0.00 0.00 0.00 2.45
1716 2194 7.170658 GCTCCTATCATTAGTCAAATCACTGTC 59.829 40.741 0.00 0.00 0.00 3.51
1719 2197 4.820897 TCATTAGTCAAATCACTGTCGCT 58.179 39.130 0.00 0.00 0.00 4.93
1742 2220 1.928503 GGACGCGAATTAATTGGTCGA 59.071 47.619 15.93 0.00 36.92 4.20
1798 2277 1.961394 GGGATCATAGTGCACTCGGTA 59.039 52.381 25.56 5.97 0.00 4.02
1939 2463 8.071967 CAGGTATGCATATGTTTTGTACATCAG 58.928 37.037 10.16 0.00 44.15 2.90
1992 2516 0.109272 GATGTGAGTCGTTCCGCTCA 60.109 55.000 6.65 6.65 37.55 4.26
2005 2529 4.378149 CGTTCCGCTCATATACGAGTATGT 60.378 45.833 6.04 0.00 35.33 2.29
2007 2531 3.119955 TCCGCTCATATACGAGTATGTGC 60.120 47.826 19.24 19.24 43.16 4.57
2009 2533 3.822996 GCTCATATACGAGTATGTGCGT 58.177 45.455 13.04 0.00 39.94 5.24
2012 2536 5.616204 GCTCATATACGAGTATGTGCGTACA 60.616 44.000 9.28 9.28 44.50 2.90
2013 2537 6.303021 TCATATACGAGTATGTGCGTACAA 57.697 37.500 11.22 0.00 44.50 2.41
2014 2538 6.905578 TCATATACGAGTATGTGCGTACAAT 58.094 36.000 11.22 0.00 44.50 2.71
2025 2549 9.373603 AGTATGTGCGTACAATAATAGACAAAA 57.626 29.630 11.22 0.00 40.84 2.44
2050 2574 6.932356 TGGATTTGCTAATCTTCTGACATC 57.068 37.500 18.26 2.00 40.07 3.06
2051 2575 5.824624 TGGATTTGCTAATCTTCTGACATCC 59.175 40.000 18.26 2.56 40.07 3.51
2053 2577 6.238593 GGATTTGCTAATCTTCTGACATCCAC 60.239 42.308 18.26 0.00 40.07 4.02
2054 2578 4.142609 TGCTAATCTTCTGACATCCACC 57.857 45.455 0.00 0.00 0.00 4.61
2055 2579 3.519107 TGCTAATCTTCTGACATCCACCA 59.481 43.478 0.00 0.00 0.00 4.17
2056 2580 4.019411 TGCTAATCTTCTGACATCCACCAA 60.019 41.667 0.00 0.00 0.00 3.67
2057 2581 4.943705 GCTAATCTTCTGACATCCACCAAA 59.056 41.667 0.00 0.00 0.00 3.28
2058 2582 5.415701 GCTAATCTTCTGACATCCACCAAAA 59.584 40.000 0.00 0.00 0.00 2.44
2061 2585 5.710513 TCTTCTGACATCCACCAAAAATG 57.289 39.130 0.00 0.00 0.00 2.32
2062 2586 5.384336 TCTTCTGACATCCACCAAAAATGA 58.616 37.500 0.00 0.00 0.00 2.57
2063 2587 5.241506 TCTTCTGACATCCACCAAAAATGAC 59.758 40.000 0.00 0.00 0.00 3.06
2064 2588 3.501828 TCTGACATCCACCAAAAATGACG 59.498 43.478 0.00 0.00 0.00 4.35
2065 2589 3.218453 TGACATCCACCAAAAATGACGT 58.782 40.909 0.00 0.00 0.00 4.34
2066 2590 3.004210 TGACATCCACCAAAAATGACGTG 59.996 43.478 0.00 0.00 0.00 4.49
2067 2591 2.955660 ACATCCACCAAAAATGACGTGT 59.044 40.909 0.00 0.00 0.00 4.49
2068 2592 3.243367 ACATCCACCAAAAATGACGTGTG 60.243 43.478 0.00 0.00 0.00 3.82
2069 2593 2.644676 TCCACCAAAAATGACGTGTGA 58.355 42.857 0.00 0.00 0.00 3.58
2070 2594 3.017442 TCCACCAAAAATGACGTGTGAA 58.983 40.909 0.00 0.00 0.00 3.18
2071 2595 3.634448 TCCACCAAAAATGACGTGTGAAT 59.366 39.130 0.00 0.00 0.00 2.57
2072 2596 4.098654 TCCACCAAAAATGACGTGTGAATT 59.901 37.500 0.00 0.00 0.00 2.17
2073 2597 4.808364 CCACCAAAAATGACGTGTGAATTT 59.192 37.500 0.00 0.00 0.00 1.82
2075 2599 5.518128 CACCAAAAATGACGTGTGAATTTGA 59.482 36.000 0.00 0.00 0.00 2.69
2076 2600 5.748152 ACCAAAAATGACGTGTGAATTTGAG 59.252 36.000 0.00 0.00 0.00 3.02
2078 2602 6.255453 CCAAAAATGACGTGTGAATTTGAGTT 59.745 34.615 0.00 0.00 0.00 3.01
2079 2603 7.329582 CAAAAATGACGTGTGAATTTGAGTTC 58.670 34.615 0.00 0.00 0.00 3.01
2080 2604 6.377327 AAATGACGTGTGAATTTGAGTTCT 57.623 33.333 0.00 0.00 0.00 3.01
2081 2605 7.490962 AAATGACGTGTGAATTTGAGTTCTA 57.509 32.000 0.00 0.00 0.00 2.10
2082 2606 6.712241 ATGACGTGTGAATTTGAGTTCTAG 57.288 37.500 0.00 0.00 0.00 2.43
2083 2607 5.838529 TGACGTGTGAATTTGAGTTCTAGA 58.161 37.500 0.00 0.00 0.00 2.43
2084 2608 6.277605 TGACGTGTGAATTTGAGTTCTAGAA 58.722 36.000 0.00 0.00 0.00 2.10
2086 2610 7.441157 TGACGTGTGAATTTGAGTTCTAGAAAT 59.559 33.333 6.78 5.81 0.00 2.17
2087 2611 7.576236 ACGTGTGAATTTGAGTTCTAGAAATG 58.424 34.615 10.69 0.00 0.00 2.32
2088 2612 7.226720 ACGTGTGAATTTGAGTTCTAGAAATGT 59.773 33.333 10.69 0.00 0.00 2.71
2089 2613 7.531871 CGTGTGAATTTGAGTTCTAGAAATGTG 59.468 37.037 10.69 0.00 0.00 3.21
2093 2617 7.177216 TGAATTTGAGTTCTAGAAATGTGCCAT 59.823 33.333 10.69 0.00 0.00 4.40
2094 2618 8.579850 AATTTGAGTTCTAGAAATGTGCCATA 57.420 30.769 10.69 0.00 0.00 2.74
2098 2622 9.851686 TTGAGTTCTAGAAATGTGCCATATTAT 57.148 29.630 10.69 0.00 0.00 1.28
2099 2623 9.851686 TGAGTTCTAGAAATGTGCCATATTATT 57.148 29.630 10.69 0.00 0.00 1.40
2101 2625 9.289782 AGTTCTAGAAATGTGCCATATTATTCC 57.710 33.333 6.78 0.00 0.00 3.01
2103 2627 8.621532 TCTAGAAATGTGCCATATTATTCCAC 57.378 34.615 0.00 0.00 0.00 4.02
2106 2630 6.606796 AGAAATGTGCCATATTATTCCACACA 59.393 34.615 7.81 0.00 38.99 3.72
2107 2631 6.982160 AATGTGCCATATTATTCCACACAT 57.018 33.333 0.00 0.00 46.17 3.21
2108 2632 6.982160 ATGTGCCATATTATTCCACACATT 57.018 33.333 0.00 0.00 42.82 2.71
2109 2633 6.788598 TGTGCCATATTATTCCACACATTT 57.211 33.333 0.00 0.00 32.06 2.32
2110 2634 6.804677 TGTGCCATATTATTCCACACATTTC 58.195 36.000 0.00 0.00 32.06 2.17
2111 2635 6.183360 TGTGCCATATTATTCCACACATTTCC 60.183 38.462 0.00 0.00 32.06 3.13
2112 2636 6.040842 GTGCCATATTATTCCACACATTTCCT 59.959 38.462 0.00 0.00 0.00 3.36
2114 2638 7.782168 TGCCATATTATTCCACACATTTCCTAA 59.218 33.333 0.00 0.00 0.00 2.69
2116 2640 9.965824 CCATATTATTCCACACATTTCCTAAAC 57.034 33.333 0.00 0.00 0.00 2.01
2120 2644 6.737254 ATTCCACACATTTCCTAAACTACG 57.263 37.500 0.00 0.00 0.00 3.51
2121 2645 5.217978 TCCACACATTTCCTAAACTACGT 57.782 39.130 0.00 0.00 0.00 3.57
2122 2646 5.613329 TCCACACATTTCCTAAACTACGTT 58.387 37.500 0.00 0.00 0.00 3.99
2123 2647 5.697633 TCCACACATTTCCTAAACTACGTTC 59.302 40.000 0.00 0.00 0.00 3.95
2124 2648 5.467399 CCACACATTTCCTAAACTACGTTCA 59.533 40.000 0.00 0.00 0.00 3.18
2125 2649 6.148811 CCACACATTTCCTAAACTACGTTCAT 59.851 38.462 0.00 0.00 0.00 2.57
2126 2650 7.332430 CCACACATTTCCTAAACTACGTTCATA 59.668 37.037 0.00 0.00 0.00 2.15
2127 2651 8.879759 CACACATTTCCTAAACTACGTTCATAT 58.120 33.333 0.00 0.00 0.00 1.78
2128 2652 9.444600 ACACATTTCCTAAACTACGTTCATATT 57.555 29.630 0.00 0.00 0.00 1.28
2185 2709 7.203255 GCCTAAGCTTCTGAACTTTCTAAAA 57.797 36.000 0.00 0.00 35.50 1.52
2186 2710 7.821652 GCCTAAGCTTCTGAACTTTCTAAAAT 58.178 34.615 0.00 0.00 35.50 1.82
2187 2711 8.300286 GCCTAAGCTTCTGAACTTTCTAAAATT 58.700 33.333 0.00 0.00 35.50 1.82
2188 2712 9.617975 CCTAAGCTTCTGAACTTTCTAAAATTG 57.382 33.333 0.00 0.00 0.00 2.32
2191 2715 8.457238 AGCTTCTGAACTTTCTAAAATTGTCT 57.543 30.769 0.00 0.00 0.00 3.41
2192 2716 8.563732 AGCTTCTGAACTTTCTAAAATTGTCTC 58.436 33.333 0.00 0.00 0.00 3.36
2193 2717 8.345565 GCTTCTGAACTTTCTAAAATTGTCTCA 58.654 33.333 0.00 0.00 0.00 3.27
2194 2718 9.657121 CTTCTGAACTTTCTAAAATTGTCTCAC 57.343 33.333 0.00 0.00 0.00 3.51
2195 2719 8.154649 TCTGAACTTTCTAAAATTGTCTCACC 57.845 34.615 0.00 0.00 0.00 4.02
2228 2752 7.936950 AAGCTTCTGAACTTTCTAAAATTGC 57.063 32.000 0.00 0.00 0.00 3.56
2253 2777 1.630878 CCTGAACCCTAGCTTGGTCTT 59.369 52.381 13.38 3.93 34.15 3.01
2260 2784 5.514500 ACCCTAGCTTGGTCTTGAATTTA 57.486 39.130 13.38 0.00 0.00 1.40
2261 2785 5.501156 ACCCTAGCTTGGTCTTGAATTTAG 58.499 41.667 13.38 0.00 0.00 1.85
2268 2792 6.207614 AGCTTGGTCTTGAATTTAGAGGTTTC 59.792 38.462 0.00 0.00 0.00 2.78
2270 2794 7.470009 GCTTGGTCTTGAATTTAGAGGTTTCAA 60.470 37.037 0.00 0.00 37.11 2.69
2280 2804 8.655935 AATTTAGAGGTTTCAAGGAATGTGAT 57.344 30.769 0.00 0.00 0.00 3.06
2281 2805 9.753674 AATTTAGAGGTTTCAAGGAATGTGATA 57.246 29.630 0.00 0.00 0.00 2.15
2297 2821 9.736023 GGAATGTGATAAAAATTCATAGGTGTC 57.264 33.333 0.00 0.00 32.96 3.67
2300 2824 8.279970 TGTGATAAAAATTCATAGGTGTCTGG 57.720 34.615 0.00 0.00 0.00 3.86
2301 2825 8.106462 TGTGATAAAAATTCATAGGTGTCTGGA 58.894 33.333 0.00 0.00 0.00 3.86
2306 2831 1.393603 TCATAGGTGTCTGGAGCGAG 58.606 55.000 0.00 0.00 0.00 5.03
2320 2845 2.930682 GGAGCGAGGTGAGTTTGTAATC 59.069 50.000 0.00 0.00 0.00 1.75
2322 2847 3.589988 AGCGAGGTGAGTTTGTAATCTG 58.410 45.455 0.00 0.00 0.00 2.90
2325 2850 4.927425 GCGAGGTGAGTTTGTAATCTGTAA 59.073 41.667 0.00 0.00 0.00 2.41
2326 2851 5.407387 GCGAGGTGAGTTTGTAATCTGTAAA 59.593 40.000 0.00 0.00 0.00 2.01
2328 2853 7.360946 GCGAGGTGAGTTTGTAATCTGTAAAAT 60.361 37.037 0.00 0.00 0.00 1.82
2329 2854 8.504005 CGAGGTGAGTTTGTAATCTGTAAAATT 58.496 33.333 0.00 0.00 0.00 1.82
2330 2855 9.827411 GAGGTGAGTTTGTAATCTGTAAAATTC 57.173 33.333 0.00 0.00 0.00 2.17
2331 2856 8.793592 AGGTGAGTTTGTAATCTGTAAAATTCC 58.206 33.333 0.00 0.00 0.00 3.01
2332 2857 8.573035 GGTGAGTTTGTAATCTGTAAAATTCCA 58.427 33.333 0.00 0.00 0.00 3.53
2399 2924 3.366422 ACAATTTGTGTCGTGTGCAAAAC 59.634 39.130 0.15 0.00 34.38 2.43
2404 2929 2.742589 TGTGTCGTGTGCAAAACTAACA 59.257 40.909 0.00 0.00 0.00 2.41
2412 2939 5.452302 CGTGTGCAAAACTAACAAGAGAAAG 59.548 40.000 0.00 0.00 0.00 2.62
2424 2951 9.007901 ACTAACAAGAGAAAGAATGATTCCTTG 57.992 33.333 15.07 15.07 38.98 3.61
2429 2956 4.410099 AGAAAGAATGATTCCTTGTGCCA 58.590 39.130 0.75 0.00 0.00 4.92
2460 2987 2.610433 GATTAAGCTTTGCAGGTTGCC 58.390 47.619 3.20 0.00 44.23 4.52
2466 2993 2.068519 GCTTTGCAGGTTGCCAATTAC 58.931 47.619 0.00 0.00 44.23 1.89
2477 3005 1.849692 TGCCAATTACTAGCATCCCCA 59.150 47.619 0.00 0.00 0.00 4.96
2560 3119 3.490419 CGTGGTAAAGATTAGGAGGGTCG 60.490 52.174 0.00 0.00 0.00 4.79
2561 3120 2.433239 TGGTAAAGATTAGGAGGGTCGC 59.567 50.000 0.00 0.00 0.00 5.19
2582 3141 4.323868 CGCTTAGTCTTCAAAGGTTCTACG 59.676 45.833 0.00 0.00 0.00 3.51
2583 3142 5.228665 GCTTAGTCTTCAAAGGTTCTACGT 58.771 41.667 0.00 0.00 0.00 3.57
2591 3150 7.223387 GTCTTCAAAGGTTCTACGTAACTGAAA 59.777 37.037 0.00 0.00 0.00 2.69
2611 3170 8.956426 ACTGAAAAATAATACATAGGTGTGTGG 58.044 33.333 0.00 0.00 39.39 4.17
2617 3176 2.327325 ACATAGGTGTGTGGAGAGGT 57.673 50.000 0.00 0.00 37.14 3.85
2623 3182 6.615726 ACATAGGTGTGTGGAGAGGTTTATAT 59.384 38.462 0.00 0.00 37.14 0.86
2651 3248 5.221402 TGTGGCAGCTGAAAAATAATCAACA 60.221 36.000 20.43 2.91 0.00 3.33
2656 3253 8.382875 GGCAGCTGAAAAATAATCAACAAATAC 58.617 33.333 20.43 0.00 0.00 1.89
2657 3254 8.924691 GCAGCTGAAAAATAATCAACAAATACA 58.075 29.630 20.43 0.00 0.00 2.29
2739 3336 7.967771 TCACAACGCATGTATATCATTTTTG 57.032 32.000 0.00 0.00 41.46 2.44
2740 3337 7.534282 TCACAACGCATGTATATCATTTTTGT 58.466 30.769 0.00 0.00 41.46 2.83
2741 3338 8.669243 TCACAACGCATGTATATCATTTTTGTA 58.331 29.630 0.00 0.00 41.46 2.41
2743 3340 9.502145 ACAACGCATGTATATCATTTTTGTAAG 57.498 29.630 0.00 0.00 41.63 2.34
2744 3341 9.502145 CAACGCATGTATATCATTTTTGTAAGT 57.498 29.630 0.00 0.00 34.09 2.24
2776 3374 4.397417 GTGGCCTATCATTTCATAGCATCC 59.603 45.833 3.32 0.00 0.00 3.51
2792 3410 2.112998 CATCCCCTGCAAACCATGATT 58.887 47.619 0.00 0.00 0.00 2.57
2808 3426 6.998802 ACCATGATTTTAAAAATCGGTCCAA 58.001 32.000 4.44 0.00 0.00 3.53
2814 3432 6.466885 TTTTAAAAATCGGTCCAAGGTTCA 57.533 33.333 0.00 0.00 0.00 3.18
2862 3481 2.433970 ACAGTTTCATGGTTTGGGGTTG 59.566 45.455 0.00 0.00 0.00 3.77
2864 3483 3.111484 AGTTTCATGGTTTGGGGTTGTT 58.889 40.909 0.00 0.00 0.00 2.83
2865 3484 4.100189 CAGTTTCATGGTTTGGGGTTGTTA 59.900 41.667 0.00 0.00 0.00 2.41
2866 3485 4.343814 AGTTTCATGGTTTGGGGTTGTTAG 59.656 41.667 0.00 0.00 0.00 2.34
2868 3487 3.917300 TCATGGTTTGGGGTTGTTAGTT 58.083 40.909 0.00 0.00 0.00 2.24
2869 3488 5.063017 TCATGGTTTGGGGTTGTTAGTTA 57.937 39.130 0.00 0.00 0.00 2.24
2872 3491 4.463070 TGGTTTGGGGTTGTTAGTTAGAC 58.537 43.478 0.00 0.00 0.00 2.59
2873 3492 3.499537 GGTTTGGGGTTGTTAGTTAGACG 59.500 47.826 0.00 0.00 0.00 4.18
2901 3520 4.760204 CCGATAGTTCAGGGTTCAAAACTT 59.240 41.667 0.00 0.00 34.09 2.66
2903 3522 6.092259 CCGATAGTTCAGGGTTCAAAACTTAG 59.908 42.308 0.00 0.00 34.09 2.18
2915 3534 9.888878 GGGTTCAAAACTTAGAATGTTAGTTAC 57.111 33.333 0.00 0.00 32.17 2.50
2919 3538 9.498176 TCAAAACTTAGAATGTTAGTTACTCCC 57.502 33.333 0.00 0.00 32.17 4.30
2920 3539 9.503399 CAAAACTTAGAATGTTAGTTACTCCCT 57.497 33.333 0.00 0.00 32.17 4.20
2921 3540 9.722184 AAAACTTAGAATGTTAGTTACTCCCTC 57.278 33.333 0.00 0.00 32.17 4.30
2922 3541 8.667592 AACTTAGAATGTTAGTTACTCCCTCT 57.332 34.615 0.00 0.00 30.75 3.69
2923 3542 8.068892 ACTTAGAATGTTAGTTACTCCCTCTG 57.931 38.462 0.00 0.00 0.00 3.35
2924 3543 7.674772 ACTTAGAATGTTAGTTACTCCCTCTGT 59.325 37.037 0.00 0.00 0.00 3.41
2925 3544 6.532988 AGAATGTTAGTTACTCCCTCTGTC 57.467 41.667 0.00 0.00 0.00 3.51
2926 3545 5.422650 AGAATGTTAGTTACTCCCTCTGTCC 59.577 44.000 0.00 0.00 0.00 4.02
2927 3546 3.438183 TGTTAGTTACTCCCTCTGTCCC 58.562 50.000 0.00 0.00 0.00 4.46
2928 3547 3.181415 TGTTAGTTACTCCCTCTGTCCCA 60.181 47.826 0.00 0.00 0.00 4.37
2929 3548 2.950990 AGTTACTCCCTCTGTCCCAT 57.049 50.000 0.00 0.00 0.00 4.00
2930 3549 5.206587 GTTAGTTACTCCCTCTGTCCCATA 58.793 45.833 0.00 0.00 0.00 2.74
2931 3550 4.348020 AGTTACTCCCTCTGTCCCATAA 57.652 45.455 0.00 0.00 0.00 1.90
2932 3551 4.897051 AGTTACTCCCTCTGTCCCATAAT 58.103 43.478 0.00 0.00 0.00 1.28
2933 3552 6.039415 AGTTACTCCCTCTGTCCCATAATA 57.961 41.667 0.00 0.00 0.00 0.98
2934 3553 6.635021 AGTTACTCCCTCTGTCCCATAATAT 58.365 40.000 0.00 0.00 0.00 1.28
2935 3554 7.776745 AGTTACTCCCTCTGTCCCATAATATA 58.223 38.462 0.00 0.00 0.00 0.86
2936 3555 8.239478 AGTTACTCCCTCTGTCCCATAATATAA 58.761 37.037 0.00 0.00 0.00 0.98
2937 3556 8.532819 GTTACTCCCTCTGTCCCATAATATAAG 58.467 40.741 0.00 0.00 0.00 1.73
2938 3557 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
2939 3558 6.726764 ACTCCCTCTGTCCCATAATATAAGAC 59.273 42.308 0.00 0.00 0.00 3.01
2940 3559 5.715279 TCCCTCTGTCCCATAATATAAGACG 59.285 44.000 0.00 0.00 0.00 4.18
2941 3560 5.480772 CCCTCTGTCCCATAATATAAGACGT 59.519 44.000 0.00 0.00 0.00 4.34
2942 3561 6.014499 CCCTCTGTCCCATAATATAAGACGTT 60.014 42.308 0.00 0.00 0.00 3.99
2943 3562 7.442656 CCTCTGTCCCATAATATAAGACGTTT 58.557 38.462 0.00 0.00 0.00 3.60
2944 3563 7.931948 CCTCTGTCCCATAATATAAGACGTTTT 59.068 37.037 0.00 0.00 0.00 2.43
2945 3564 8.657074 TCTGTCCCATAATATAAGACGTTTTG 57.343 34.615 0.83 0.00 0.00 2.44
2946 3565 7.225931 TCTGTCCCATAATATAAGACGTTTTGC 59.774 37.037 0.83 0.00 0.00 3.68
2947 3566 6.824196 TGTCCCATAATATAAGACGTTTTGCA 59.176 34.615 0.83 0.00 0.00 4.08
2948 3567 7.337184 TGTCCCATAATATAAGACGTTTTGCAA 59.663 33.333 0.83 0.00 0.00 4.08
2949 3568 7.855904 GTCCCATAATATAAGACGTTTTGCAAG 59.144 37.037 0.00 0.00 0.00 4.01
2950 3569 6.636850 CCCATAATATAAGACGTTTTGCAAGC 59.363 38.462 0.00 0.00 0.00 4.01
2951 3570 7.417612 CCATAATATAAGACGTTTTGCAAGCT 58.582 34.615 0.00 0.00 0.00 3.74
2952 3571 8.556194 CCATAATATAAGACGTTTTGCAAGCTA 58.444 33.333 0.00 0.00 0.00 3.32
2955 3574 5.880054 ATAAGACGTTTTGCAAGCTATGT 57.120 34.783 0.00 1.05 0.00 2.29
2956 3575 4.568152 AAGACGTTTTGCAAGCTATGTT 57.432 36.364 0.00 0.00 0.00 2.71
2957 3576 5.682943 AAGACGTTTTGCAAGCTATGTTA 57.317 34.783 0.00 0.00 0.00 2.41
2958 3577 5.283060 AGACGTTTTGCAAGCTATGTTAG 57.717 39.130 0.00 0.00 0.00 2.34
2959 3578 4.154195 AGACGTTTTGCAAGCTATGTTAGG 59.846 41.667 0.00 0.00 0.00 2.69
2960 3579 3.818773 ACGTTTTGCAAGCTATGTTAGGT 59.181 39.130 0.00 0.00 38.32 3.08
2961 3580 4.277423 ACGTTTTGCAAGCTATGTTAGGTT 59.723 37.500 0.00 0.00 46.49 3.50
2971 3590 6.345096 AGCTATGTTAGGTTGCAAAAATGT 57.655 33.333 0.00 0.00 31.36 2.71
2972 3591 6.389906 AGCTATGTTAGGTTGCAAAAATGTC 58.610 36.000 0.00 0.00 31.36 3.06
2973 3592 6.209391 AGCTATGTTAGGTTGCAAAAATGTCT 59.791 34.615 0.00 0.00 31.36 3.41
2974 3593 6.868339 GCTATGTTAGGTTGCAAAAATGTCTT 59.132 34.615 0.00 0.00 0.00 3.01
2975 3594 8.026607 GCTATGTTAGGTTGCAAAAATGTCTTA 58.973 33.333 0.00 0.00 0.00 2.10
2983 3602 8.199449 AGGTTGCAAAAATGTCTTATATCATGG 58.801 33.333 0.00 0.00 0.00 3.66
2984 3603 7.439056 GGTTGCAAAAATGTCTTATATCATGGG 59.561 37.037 0.00 0.00 0.00 4.00
2985 3604 7.894753 TGCAAAAATGTCTTATATCATGGGA 57.105 32.000 0.00 0.00 0.00 4.37
2986 3605 7.715657 TGCAAAAATGTCTTATATCATGGGAC 58.284 34.615 0.00 0.00 0.00 4.46
2987 3606 6.857964 GCAAAAATGTCTTATATCATGGGACG 59.142 38.462 0.00 0.00 0.00 4.79
2988 3607 7.255104 GCAAAAATGTCTTATATCATGGGACGA 60.255 37.037 0.00 0.00 0.00 4.20
2989 3608 8.620416 CAAAAATGTCTTATATCATGGGACGAA 58.380 33.333 0.00 0.00 0.00 3.85
2990 3609 7.969536 AAATGTCTTATATCATGGGACGAAG 57.030 36.000 0.00 0.00 0.00 3.79
2991 3610 5.468540 TGTCTTATATCATGGGACGAAGG 57.531 43.478 0.00 0.00 0.00 3.46
2992 3611 4.283467 TGTCTTATATCATGGGACGAAGGG 59.717 45.833 0.00 0.00 0.00 3.95
2993 3612 4.527038 GTCTTATATCATGGGACGAAGGGA 59.473 45.833 0.00 0.00 0.00 4.20
2994 3613 4.772624 TCTTATATCATGGGACGAAGGGAG 59.227 45.833 0.00 0.00 0.00 4.30
2995 3614 2.471815 TATCATGGGACGAAGGGAGT 57.528 50.000 0.00 0.00 0.00 3.85
2996 3615 2.471815 ATCATGGGACGAAGGGAGTA 57.528 50.000 0.00 0.00 0.00 2.59
2997 3616 2.471815 TCATGGGACGAAGGGAGTAT 57.528 50.000 0.00 0.00 0.00 2.12
2998 3617 2.039418 TCATGGGACGAAGGGAGTATG 58.961 52.381 0.00 0.00 0.00 2.39
2999 3618 1.762957 CATGGGACGAAGGGAGTATGT 59.237 52.381 0.00 0.00 0.00 2.29
3000 3619 1.946984 TGGGACGAAGGGAGTATGTT 58.053 50.000 0.00 0.00 0.00 2.71
3001 3620 1.553248 TGGGACGAAGGGAGTATGTTG 59.447 52.381 0.00 0.00 0.00 3.33
3018 3637 7.334090 AGTATGTTGCACTGTTTCTAGATCAT 58.666 34.615 0.00 0.00 0.00 2.45
3020 3639 9.265901 GTATGTTGCACTGTTTCTAGATCATAT 57.734 33.333 0.00 0.00 0.00 1.78
3026 3645 9.399797 TGCACTGTTTCTAGATCATATGAAAAT 57.600 29.630 9.99 1.33 31.47 1.82
3092 3711 6.884295 TCGAGAGAATTACACCAAAATGGAAT 59.116 34.615 2.85 0.00 37.02 3.01
3108 3727 4.419522 TGGAATTTCAAGTCGCTTTAGC 57.580 40.909 0.00 0.00 37.78 3.09
3214 3833 9.995003 AATCACATCCTAGATGATAGAAAGAAC 57.005 33.333 11.40 0.00 32.74 3.01
3273 3893 8.414778 GCTACTCTAGAAGCTTACCTTAATCAA 58.585 37.037 8.86 0.00 35.80 2.57
3295 3915 7.026562 TCAATTGTATAGTTTTGCATTCCACG 58.973 34.615 5.13 0.00 0.00 4.94
3296 3916 6.751514 ATTGTATAGTTTTGCATTCCACGA 57.248 33.333 0.00 0.00 0.00 4.35
3297 3917 6.561737 TTGTATAGTTTTGCATTCCACGAA 57.438 33.333 0.00 0.00 0.00 3.85
3305 3925 6.200097 AGTTTTGCATTCCACGAAATTTACAC 59.800 34.615 0.00 0.00 0.00 2.90
3320 3940 4.530094 TTTACACACTGCAAGAAGTTCG 57.470 40.909 0.00 0.00 37.43 3.95
3326 3946 2.866156 CACTGCAAGAAGTTCGAGTGAA 59.134 45.455 16.23 4.04 37.43 3.18
3329 3949 4.576463 ACTGCAAGAAGTTCGAGTGAATTT 59.424 37.500 8.03 0.00 36.82 1.82
3331 3951 6.428159 ACTGCAAGAAGTTCGAGTGAATTTAT 59.572 34.615 8.03 0.00 34.57 1.40
3333 3953 8.492673 TGCAAGAAGTTCGAGTGAATTTATAT 57.507 30.769 8.03 0.00 34.57 0.86
3355 3975 2.809696 CACATGATTCACAGACAGCACA 59.190 45.455 0.00 0.00 0.00 4.57
3357 3977 4.077108 ACATGATTCACAGACAGCACAAT 58.923 39.130 0.00 0.00 0.00 2.71
3359 3979 4.492791 TGATTCACAGACAGCACAATTG 57.507 40.909 3.24 3.24 0.00 2.32
3386 4007 2.845363 TTCGAAAAGGGGAGTACACC 57.155 50.000 0.00 0.00 40.50 4.16
3471 4094 5.803967 CCGAGTACCAGACAGTAATACAAAC 59.196 44.000 0.00 0.00 0.00 2.93
3539 4166 4.871513 TCATCCACATAATCTACGAGTGC 58.128 43.478 0.00 0.00 0.00 4.40
3548 4175 1.835494 TCTACGAGTGCCTTGCTAGT 58.165 50.000 0.00 0.00 0.00 2.57
3553 4180 2.289694 ACGAGTGCCTTGCTAGTCAAAT 60.290 45.455 0.00 0.00 33.65 2.32
3556 4183 3.753272 GAGTGCCTTGCTAGTCAAATTGA 59.247 43.478 0.00 0.00 33.65 2.57
3578 4205 5.712917 TGATTGAATAAACCCTACACAACCC 59.287 40.000 0.00 0.00 0.00 4.11
3586 4213 1.534729 CCTACACAACCCTTTCCAGC 58.465 55.000 0.00 0.00 0.00 4.85
3593 4220 4.351054 CCCTTTCCAGCCGGCTGT 62.351 66.667 44.92 19.47 42.15 4.40
3597 4224 2.185310 CTTTCCAGCCGGCTGTACCT 62.185 60.000 44.92 17.02 42.15 3.08
3648 4275 6.509418 TTACATTGAGAGGCAATAAACCAC 57.491 37.500 0.00 0.00 45.23 4.16
3708 4339 7.418942 GGCCCATAAAATGATGGTAGAAAATGT 60.419 37.037 0.00 0.00 44.37 2.71
3717 4348 3.788937 TGGTAGAAAATGTAGGCTACGC 58.211 45.455 19.13 6.67 35.29 4.42
3718 4349 3.196039 TGGTAGAAAATGTAGGCTACGCA 59.804 43.478 19.13 3.74 35.29 5.24
3731 4362 8.439993 TGTAGGCTACGCAATTAATGAAATAA 57.560 30.769 19.13 0.00 0.00 1.40
3854 4485 3.252701 GGATATCCTCTGCTTACGACGAA 59.747 47.826 14.97 0.00 0.00 3.85
3884 4515 1.342672 GGGCCCTAATCGTGGAAGGA 61.343 60.000 17.04 0.00 33.98 3.36
3916 4547 1.524621 CCGCCGCTGGAATTCTGAT 60.525 57.895 5.23 0.00 0.00 2.90
4071 4702 0.761802 ATGAGAAATCCTCCTCGGCC 59.238 55.000 0.00 0.00 41.25 6.13
4201 4832 7.226523 TGTGCATATATACATCAAACTCCACAC 59.773 37.037 0.00 0.00 0.00 3.82
4202 4833 6.423604 TGCATATATACATCAAACTCCACACG 59.576 38.462 0.00 0.00 0.00 4.49
4227 4858 9.781834 CGGTGAAATATACATGTACATTTGTTT 57.218 29.630 23.30 11.58 0.00 2.83
4300 4931 2.823747 AGTGTTCATACTGGCGTGAGTA 59.176 45.455 0.00 0.00 32.97 2.59
4327 4958 4.931601 TGCATGACAACTATGTGTCTTCTC 59.068 41.667 0.00 0.00 46.70 2.87
4407 5070 4.958509 ACACAAAACCATTTCATGCATGA 58.041 34.783 25.42 25.42 34.44 3.07
4408 5071 4.992319 ACACAAAACCATTTCATGCATGAG 59.008 37.500 27.25 18.74 38.19 2.90
4409 5072 3.998341 ACAAAACCATTTCATGCATGAGC 59.002 39.130 27.25 0.00 38.19 4.26
4410 5073 2.572191 AACCATTTCATGCATGAGCG 57.428 45.000 27.25 19.09 46.23 5.03
4411 5074 1.753930 ACCATTTCATGCATGAGCGA 58.246 45.000 27.25 18.16 46.23 4.93
4412 5075 2.304092 ACCATTTCATGCATGAGCGAT 58.696 42.857 27.25 19.41 46.23 4.58
4413 5076 2.292569 ACCATTTCATGCATGAGCGATC 59.707 45.455 27.25 0.00 46.23 3.69
4414 5077 2.292292 CCATTTCATGCATGAGCGATCA 59.708 45.455 27.25 5.53 46.23 2.92
4415 5078 3.057526 CCATTTCATGCATGAGCGATCAT 60.058 43.478 27.25 11.05 46.23 2.45
4416 5079 4.155280 CCATTTCATGCATGAGCGATCATA 59.845 41.667 27.25 9.29 46.23 2.15
4417 5080 4.737353 TTTCATGCATGAGCGATCATAC 57.263 40.909 27.25 11.70 46.23 2.39
4418 5081 3.672767 TCATGCATGAGCGATCATACT 57.327 42.857 25.42 0.79 46.23 2.12
4419 5082 3.323243 TCATGCATGAGCGATCATACTG 58.677 45.455 25.42 13.36 46.23 2.74
4420 5083 2.159327 TGCATGAGCGATCATACTGG 57.841 50.000 16.98 5.05 46.23 4.00
4421 5084 0.795085 GCATGAGCGATCATACTGGC 59.205 55.000 16.98 11.80 0.00 4.85
4422 5085 1.066136 CATGAGCGATCATACTGGCG 58.934 55.000 16.98 0.00 0.00 5.69
4423 5086 0.676184 ATGAGCGATCATACTGGCGT 59.324 50.000 15.77 0.00 0.00 5.68
4424 5087 0.249031 TGAGCGATCATACTGGCGTG 60.249 55.000 0.00 0.00 0.00 5.34
4425 5088 0.941463 GAGCGATCATACTGGCGTGG 60.941 60.000 0.00 0.00 0.00 4.94
4426 5089 1.956170 GCGATCATACTGGCGTGGG 60.956 63.158 0.00 0.00 0.00 4.61
4427 5090 1.441729 CGATCATACTGGCGTGGGT 59.558 57.895 0.00 0.00 0.00 4.51
4428 5091 0.875908 CGATCATACTGGCGTGGGTG 60.876 60.000 0.00 0.00 0.00 4.61
4429 5092 0.178068 GATCATACTGGCGTGGGTGT 59.822 55.000 0.00 0.00 0.00 4.16
4430 5093 0.107703 ATCATACTGGCGTGGGTGTG 60.108 55.000 0.00 0.00 0.00 3.82
4431 5094 1.745115 CATACTGGCGTGGGTGTGG 60.745 63.158 0.00 0.00 0.00 4.17
4432 5095 2.221299 ATACTGGCGTGGGTGTGGT 61.221 57.895 0.00 0.00 0.00 4.16
4433 5096 2.463589 ATACTGGCGTGGGTGTGGTG 62.464 60.000 0.00 0.00 0.00 4.17
4434 5097 4.562425 CTGGCGTGGGTGTGGTGT 62.562 66.667 0.00 0.00 0.00 4.16
4435 5098 4.866224 TGGCGTGGGTGTGGTGTG 62.866 66.667 0.00 0.00 0.00 3.82
4438 5101 4.901123 CGTGGGTGTGGTGTGCGA 62.901 66.667 0.00 0.00 0.00 5.10
4439 5102 2.281484 GTGGGTGTGGTGTGCGAT 60.281 61.111 0.00 0.00 0.00 4.58
4440 5103 2.281414 TGGGTGTGGTGTGCGATG 60.281 61.111 0.00 0.00 0.00 3.84
4441 5104 2.031919 GGGTGTGGTGTGCGATGA 59.968 61.111 0.00 0.00 0.00 2.92
4442 5105 1.599518 GGGTGTGGTGTGCGATGAA 60.600 57.895 0.00 0.00 0.00 2.57
4443 5106 0.960364 GGGTGTGGTGTGCGATGAAT 60.960 55.000 0.00 0.00 0.00 2.57
4444 5107 0.168788 GGTGTGGTGTGCGATGAATG 59.831 55.000 0.00 0.00 0.00 2.67
4445 5108 0.454957 GTGTGGTGTGCGATGAATGC 60.455 55.000 0.00 0.00 0.00 3.56
4446 5109 0.888285 TGTGGTGTGCGATGAATGCA 60.888 50.000 0.00 0.00 40.70 3.96
4447 5110 0.452987 GTGGTGTGCGATGAATGCAT 59.547 50.000 0.00 0.00 45.34 3.96
4448 5111 0.452585 TGGTGTGCGATGAATGCATG 59.547 50.000 0.00 0.00 45.34 4.06
4479 5142 9.831737 CTTTGTACTCCAGAAGTAAAATGAATG 57.168 33.333 0.00 0.00 42.11 2.67
4481 5144 9.567776 TTGTACTCCAGAAGTAAAATGAATGAA 57.432 29.630 0.00 0.00 42.11 2.57
4482 5145 9.739276 TGTACTCCAGAAGTAAAATGAATGAAT 57.261 29.630 0.00 0.00 42.11 2.57
4561 5224 0.463620 ACCAAACAATGTGTGCACCC 59.536 50.000 15.69 2.52 0.00 4.61
4594 5257 4.314522 TGGTTAGCCATCTCAATCCAAA 57.685 40.909 0.00 0.00 40.46 3.28
4595 5258 4.870636 TGGTTAGCCATCTCAATCCAAAT 58.129 39.130 0.00 0.00 40.46 2.32
4597 5260 4.889409 GGTTAGCCATCTCAATCCAAATCA 59.111 41.667 0.00 0.00 34.09 2.57
4600 5263 7.322664 GTTAGCCATCTCAATCCAAATCAAAA 58.677 34.615 0.00 0.00 0.00 2.44
4601 5264 5.974108 AGCCATCTCAATCCAAATCAAAAG 58.026 37.500 0.00 0.00 0.00 2.27
4602 5265 5.482878 AGCCATCTCAATCCAAATCAAAAGT 59.517 36.000 0.00 0.00 0.00 2.66
4603 5266 6.664816 AGCCATCTCAATCCAAATCAAAAGTA 59.335 34.615 0.00 0.00 0.00 2.24
4604 5267 6.976925 GCCATCTCAATCCAAATCAAAAGTAG 59.023 38.462 0.00 0.00 0.00 2.57
4605 5268 7.363268 GCCATCTCAATCCAAATCAAAAGTAGT 60.363 37.037 0.00 0.00 0.00 2.73
4629 5770 8.434392 AGTGTATGTACAATTATTATCCCGGTT 58.566 33.333 0.00 0.00 38.04 4.44
4644 5785 8.754991 TTATCCCGGTTACATCAATTAAATGT 57.245 30.769 0.00 9.76 40.37 2.71
4675 5816 2.920912 TCGAGGAAACAGCCCCGT 60.921 61.111 0.00 0.00 0.00 5.28
4677 5818 2.430367 GAGGAAACAGCCCCGTGT 59.570 61.111 0.00 0.00 0.00 4.49
4679 5820 2.112297 GGAAACAGCCCCGTGTCA 59.888 61.111 0.00 0.00 0.00 3.58
4824 7238 3.649277 CTCTTCTCGTGGCGGGTGG 62.649 68.421 0.00 0.00 0.00 4.61
4832 7246 1.228154 GTGGCGGGTGGTTCTCTTT 60.228 57.895 0.00 0.00 0.00 2.52
4840 7254 1.133915 GGTGGTTCTCTTTCACACCCA 60.134 52.381 0.00 0.00 44.40 4.51
4842 7256 2.814336 GTGGTTCTCTTTCACACCCATC 59.186 50.000 0.00 0.00 0.00 3.51
4843 7257 2.711009 TGGTTCTCTTTCACACCCATCT 59.289 45.455 0.00 0.00 0.00 2.90
4844 7258 3.244561 TGGTTCTCTTTCACACCCATCTC 60.245 47.826 0.00 0.00 0.00 2.75
4845 7259 2.996621 GTTCTCTTTCACACCCATCTCG 59.003 50.000 0.00 0.00 0.00 4.04
4846 7260 2.525368 TCTCTTTCACACCCATCTCGA 58.475 47.619 0.00 0.00 0.00 4.04
4847 7261 2.897326 TCTCTTTCACACCCATCTCGAA 59.103 45.455 0.00 0.00 0.00 3.71
4848 7262 3.515502 TCTCTTTCACACCCATCTCGAAT 59.484 43.478 0.00 0.00 0.00 3.34
4849 7263 4.709886 TCTCTTTCACACCCATCTCGAATA 59.290 41.667 0.00 0.00 0.00 1.75
4850 7264 5.186992 TCTCTTTCACACCCATCTCGAATAA 59.813 40.000 0.00 0.00 0.00 1.40
4851 7265 5.800296 TCTTTCACACCCATCTCGAATAAA 58.200 37.500 0.00 0.00 0.00 1.40
4852 7266 6.414732 TCTTTCACACCCATCTCGAATAAAT 58.585 36.000 0.00 0.00 0.00 1.40
4853 7267 6.538742 TCTTTCACACCCATCTCGAATAAATC 59.461 38.462 0.00 0.00 0.00 2.17
4885 7299 4.218852 AGGGACAGTCTCTAAAGAAGAACG 59.781 45.833 0.00 0.00 32.46 3.95
4886 7300 4.217983 GGGACAGTCTCTAAAGAAGAACGA 59.782 45.833 0.00 0.00 32.46 3.85
4888 7302 6.095160 GGGACAGTCTCTAAAGAAGAACGATA 59.905 42.308 0.00 0.00 32.46 2.92
4943 7357 1.674817 CGCCGACCCAATGAGTACTTT 60.675 52.381 0.00 0.00 0.00 2.66
4954 7368 6.375455 CCCAATGAGTACTTTATGCTGAAACT 59.625 38.462 0.00 0.00 0.00 2.66
4956 7370 8.299570 CCAATGAGTACTTTATGCTGAAACTTT 58.700 33.333 0.00 0.00 0.00 2.66
4958 7372 8.621532 ATGAGTACTTTATGCTGAAACTTTCA 57.378 30.769 0.00 4.16 38.17 2.69
4968 7382 0.822121 GAAACTTTCACGGGCTGGGT 60.822 55.000 0.00 0.00 0.00 4.51
4969 7383 1.106944 AAACTTTCACGGGCTGGGTG 61.107 55.000 0.00 0.00 36.74 4.61
4970 7384 1.990160 AACTTTCACGGGCTGGGTGA 61.990 55.000 0.00 0.00 42.31 4.02
4990 7404 4.081420 GTGACCCTGTGATAGTTCATGAGT 60.081 45.833 0.00 0.00 33.56 3.41
4993 7407 4.287067 ACCCTGTGATAGTTCATGAGTTGT 59.713 41.667 0.00 0.00 33.56 3.32
5003 7417 2.771089 TCATGAGTTGTGCAACCTCTC 58.229 47.619 11.00 4.13 42.06 3.20
5004 7418 1.462283 CATGAGTTGTGCAACCTCTCG 59.538 52.381 11.00 2.23 42.06 4.04
5005 7419 0.880278 TGAGTTGTGCAACCTCTCGC 60.880 55.000 11.00 0.00 42.06 5.03
5006 7420 1.891060 GAGTTGTGCAACCTCTCGCG 61.891 60.000 11.00 0.00 42.06 5.87
5007 7421 2.664851 TTGTGCAACCTCTCGCGG 60.665 61.111 6.13 0.00 34.36 6.46
5008 7422 4.680237 TGTGCAACCTCTCGCGGG 62.680 66.667 6.13 1.01 34.36 6.13
5009 7423 4.373116 GTGCAACCTCTCGCGGGA 62.373 66.667 9.14 9.14 0.00 5.14
5010 7424 4.069232 TGCAACCTCTCGCGGGAG 62.069 66.667 29.27 29.27 41.89 4.30
5011 7425 4.070552 GCAACCTCTCGCGGGAGT 62.071 66.667 32.64 18.86 41.26 3.85
5012 7426 2.125912 CAACCTCTCGCGGGAGTG 60.126 66.667 32.64 25.26 41.26 3.51
5013 7427 2.600769 AACCTCTCGCGGGAGTGT 60.601 61.111 32.64 25.89 41.26 3.55
5014 7428 1.303888 AACCTCTCGCGGGAGTGTA 60.304 57.895 32.64 9.08 41.26 2.90
5015 7429 1.593296 AACCTCTCGCGGGAGTGTAC 61.593 60.000 32.64 0.00 41.26 2.90
5016 7430 2.403987 CTCTCGCGGGAGTGTACG 59.596 66.667 27.98 1.35 41.26 3.67
5017 7431 2.359107 TCTCGCGGGAGTGTACGT 60.359 61.111 26.49 0.00 41.26 3.57
5018 7432 2.099831 CTCGCGGGAGTGTACGTC 59.900 66.667 20.59 0.00 42.08 4.34
5019 7433 3.713615 CTCGCGGGAGTGTACGTCG 62.714 68.421 20.59 0.00 42.08 5.12
5020 7434 4.824166 CGCGGGAGTGTACGTCGG 62.824 72.222 0.00 0.00 35.16 4.79
5021 7435 3.741476 GCGGGAGTGTACGTCGGT 61.741 66.667 0.00 0.00 0.00 4.69
5022 7436 2.398554 GCGGGAGTGTACGTCGGTA 61.399 63.158 0.00 0.00 0.00 4.02
5023 7437 1.922135 GCGGGAGTGTACGTCGGTAA 61.922 60.000 0.00 0.00 0.00 2.85
5024 7438 0.734889 CGGGAGTGTACGTCGGTAAT 59.265 55.000 0.00 0.00 0.00 1.89
5025 7439 1.133025 CGGGAGTGTACGTCGGTAATT 59.867 52.381 0.00 0.00 0.00 1.40
5026 7440 2.792542 CGGGAGTGTACGTCGGTAATTC 60.793 54.545 0.00 0.00 0.00 2.17
5027 7441 2.424956 GGGAGTGTACGTCGGTAATTCT 59.575 50.000 0.00 0.00 0.00 2.40
5028 7442 3.119352 GGGAGTGTACGTCGGTAATTCTT 60.119 47.826 0.00 0.00 0.00 2.52
5029 7443 4.488879 GGAGTGTACGTCGGTAATTCTTT 58.511 43.478 0.00 0.00 0.00 2.52
5030 7444 4.325472 GGAGTGTACGTCGGTAATTCTTTG 59.675 45.833 0.00 0.00 0.00 2.77
5031 7445 3.676646 AGTGTACGTCGGTAATTCTTTGC 59.323 43.478 0.00 0.00 0.00 3.68
5032 7446 2.662637 TGTACGTCGGTAATTCTTTGCG 59.337 45.455 0.00 0.00 0.00 4.85
5033 7447 1.787012 ACGTCGGTAATTCTTTGCGT 58.213 45.000 0.00 0.00 0.00 5.24
5034 7448 1.458064 ACGTCGGTAATTCTTTGCGTG 59.542 47.619 0.00 0.00 0.00 5.34
5035 7449 1.201877 CGTCGGTAATTCTTTGCGTGG 60.202 52.381 0.00 0.00 0.00 4.94
5036 7450 1.802365 GTCGGTAATTCTTTGCGTGGT 59.198 47.619 0.00 0.00 0.00 4.16
5037 7451 1.801771 TCGGTAATTCTTTGCGTGGTG 59.198 47.619 0.00 0.00 0.00 4.17
5038 7452 1.135803 CGGTAATTCTTTGCGTGGTGG 60.136 52.381 0.00 0.00 0.00 4.61
5039 7453 1.201414 GGTAATTCTTTGCGTGGTGGG 59.799 52.381 0.00 0.00 0.00 4.61
5040 7454 2.156098 GTAATTCTTTGCGTGGTGGGA 58.844 47.619 0.00 0.00 0.00 4.37
5041 7455 1.698506 AATTCTTTGCGTGGTGGGAA 58.301 45.000 0.00 0.00 0.00 3.97
5042 7456 0.958822 ATTCTTTGCGTGGTGGGAAC 59.041 50.000 0.00 0.00 0.00 3.62
5043 7457 0.394488 TTCTTTGCGTGGTGGGAACA 60.394 50.000 0.00 0.00 38.70 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 6.373216 GCACCAATATCAAACACAAGGTAGTA 59.627 38.462 0.00 0.00 0.00 1.82
110 111 2.507484 GCCATATATGCAGAGTTGGCA 58.493 47.619 24.62 0.00 46.87 4.92
263 265 3.820689 GAGATCTCATCTCGGATCGTTG 58.179 50.000 18.11 0.00 45.50 4.10
334 336 1.899814 ACCAATAACTCGCTGTCTCCA 59.100 47.619 0.00 0.00 0.00 3.86
403 405 5.523588 TCTCTCTCTCTCTCTCTCTCTCTT 58.476 45.833 0.00 0.00 0.00 2.85
433 435 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
434 436 4.222336 CCTCTCTCTCTCTCTCTCTCTCT 58.778 52.174 0.00 0.00 0.00 3.10
456 458 8.494347 CATCTTTCAAACTCATGCTATAGCTAC 58.506 37.037 24.61 0.00 42.66 3.58
465 467 3.125829 TCGAGCATCTTTCAAACTCATGC 59.874 43.478 0.00 0.00 40.20 4.06
466 468 4.934075 TCGAGCATCTTTCAAACTCATG 57.066 40.909 0.00 0.00 0.00 3.07
467 469 4.999950 ACTTCGAGCATCTTTCAAACTCAT 59.000 37.500 0.00 0.00 0.00 2.90
486 498 7.044445 GGTTAATGATAGTTGTACGTCGACTTC 60.044 40.741 14.70 4.39 40.81 3.01
494 506 7.267128 TGGTAAGGGTTAATGATAGTTGTACG 58.733 38.462 0.00 0.00 0.00 3.67
519 855 3.633986 CCTTCCACTTTGCACTTTTCTCT 59.366 43.478 0.00 0.00 0.00 3.10
560 896 1.741528 CAGTACACCATGCATGCAGA 58.258 50.000 26.69 2.79 0.00 4.26
641 977 7.611467 TGCAATCACACTTTATCCTTCAACTAT 59.389 33.333 0.00 0.00 0.00 2.12
669 1006 3.420893 TGCATCCCACTTTTTCTTCGAT 58.579 40.909 0.00 0.00 0.00 3.59
699 1036 4.236935 GTGGAATGTGGTGCATAAAGTTG 58.763 43.478 0.00 0.00 36.67 3.16
735 1072 0.670546 CGAACCGCCTGACTGTCAAT 60.671 55.000 12.16 0.00 0.00 2.57
737 1074 2.197605 TCGAACCGCCTGACTGTCA 61.198 57.895 10.50 10.50 0.00 3.58
740 1077 2.805353 CGTCGAACCGCCTGACTG 60.805 66.667 0.00 0.00 0.00 3.51
749 1097 0.438830 GACATTCACAGCGTCGAACC 59.561 55.000 0.00 0.00 0.00 3.62
767 1115 5.547465 AGTCCAAACGAAAGATACATGTGA 58.453 37.500 9.11 0.00 0.00 3.58
770 1118 6.241207 ACAAGTCCAAACGAAAGATACATG 57.759 37.500 0.00 0.00 0.00 3.21
781 1129 6.354039 ACTACAAAAGTACAAGTCCAAACG 57.646 37.500 0.00 0.00 36.36 3.60
782 1130 9.874215 GATAACTACAAAAGTACAAGTCCAAAC 57.126 33.333 0.00 0.00 37.50 2.93
785 1133 7.436118 ACGATAACTACAAAAGTACAAGTCCA 58.564 34.615 0.00 0.00 37.50 4.02
788 1136 9.925268 CAAAACGATAACTACAAAAGTACAAGT 57.075 29.630 0.00 0.00 37.50 3.16
789 1137 8.889000 GCAAAACGATAACTACAAAAGTACAAG 58.111 33.333 0.00 0.00 37.50 3.16
790 1138 7.856894 GGCAAAACGATAACTACAAAAGTACAA 59.143 33.333 0.00 0.00 37.50 2.41
791 1139 7.354257 GGCAAAACGATAACTACAAAAGTACA 58.646 34.615 0.00 0.00 37.50 2.90
792 1140 6.798476 GGGCAAAACGATAACTACAAAAGTAC 59.202 38.462 0.00 0.00 37.50 2.73
801 1156 5.004448 TCAACATGGGCAAAACGATAACTA 58.996 37.500 0.00 0.00 0.00 2.24
877 1235 9.623000 TGAATTGAGAGATATCAATGTCAACAT 57.377 29.630 5.32 0.00 46.64 2.71
878 1236 9.623000 ATGAATTGAGAGATATCAATGTCAACA 57.377 29.630 5.32 2.41 46.64 3.33
983 1350 1.408266 CCATGGTTTTAGTCGGAGGGG 60.408 57.143 2.57 0.00 0.00 4.79
989 1356 0.451783 GGCAGCCATGGTTTTAGTCG 59.548 55.000 14.67 0.00 0.00 4.18
1053 1426 4.082523 CGGGCGAGCAAAGGGAGA 62.083 66.667 0.00 0.00 0.00 3.71
1401 1780 0.533032 TGGCAATGGTGTCGACGATA 59.467 50.000 11.62 0.00 29.15 2.92
1602 1999 0.510359 GGACGCATCGATCAATCAGC 59.490 55.000 0.00 0.00 0.00 4.26
1603 2000 1.856802 TGGACGCATCGATCAATCAG 58.143 50.000 0.00 0.00 0.00 2.90
1604 2001 2.531522 ATGGACGCATCGATCAATCA 57.468 45.000 0.00 0.00 0.00 2.57
1605 2002 3.579709 AGTATGGACGCATCGATCAATC 58.420 45.455 0.00 0.00 0.00 2.67
1606 2003 3.667497 AGTATGGACGCATCGATCAAT 57.333 42.857 0.00 0.00 0.00 2.57
1607 2004 3.568430 ACTAGTATGGACGCATCGATCAA 59.432 43.478 0.00 0.00 0.00 2.57
1647 2124 2.177531 GCACACAGCCTTGATGCG 59.822 61.111 0.00 0.00 37.23 4.73
1664 2141 3.427161 TCTCAGTCGAGTATGCATGTG 57.573 47.619 10.16 0.00 40.44 3.21
1665 2142 4.662468 AATCTCAGTCGAGTATGCATGT 57.338 40.909 10.16 0.00 40.44 3.21
1700 2178 3.740832 CACAGCGACAGTGATTTGACTAA 59.259 43.478 0.00 0.00 39.30 2.24
1719 2197 2.417239 GACCAATTAATTCGCGTCCACA 59.583 45.455 5.77 0.00 0.00 4.17
1742 2220 8.636213 CACCTAATTCAGATAAAGCATTGGAAT 58.364 33.333 0.00 0.00 0.00 3.01
1798 2277 2.026641 CCCAAAGACATGCCGATGATT 58.973 47.619 0.00 0.00 33.36 2.57
2005 2529 8.270080 TCCATTTTTGTCTATTATTGTACGCA 57.730 30.769 0.00 0.00 0.00 5.24
2018 2542 8.810041 AGAAGATTAGCAAATCCATTTTTGTCT 58.190 29.630 0.00 0.00 42.20 3.41
2025 2549 7.014038 GGATGTCAGAAGATTAGCAAATCCATT 59.986 37.037 0.00 0.00 42.20 3.16
2034 2558 4.142609 TGGTGGATGTCAGAAGATTAGC 57.857 45.455 0.00 0.00 0.00 3.09
2040 2564 5.464168 GTCATTTTTGGTGGATGTCAGAAG 58.536 41.667 0.00 0.00 0.00 2.85
2050 2574 3.428746 TTCACACGTCATTTTTGGTGG 57.571 42.857 0.00 0.00 34.78 4.61
2051 2575 5.518128 TCAAATTCACACGTCATTTTTGGTG 59.482 36.000 0.00 0.00 36.50 4.17
2053 2577 5.748152 ACTCAAATTCACACGTCATTTTTGG 59.252 36.000 0.00 0.00 0.00 3.28
2054 2578 6.810888 ACTCAAATTCACACGTCATTTTTG 57.189 33.333 0.00 0.00 0.00 2.44
2055 2579 7.257722 AGAACTCAAATTCACACGTCATTTTT 58.742 30.769 0.00 0.00 0.00 1.94
2056 2580 6.795399 AGAACTCAAATTCACACGTCATTTT 58.205 32.000 0.00 0.00 0.00 1.82
2057 2581 6.377327 AGAACTCAAATTCACACGTCATTT 57.623 33.333 0.00 0.00 0.00 2.32
2058 2582 6.929049 TCTAGAACTCAAATTCACACGTCATT 59.071 34.615 0.00 0.00 0.00 2.57
2061 2585 6.764877 TTCTAGAACTCAAATTCACACGTC 57.235 37.500 0.00 0.00 0.00 4.34
2062 2586 7.226720 ACATTTCTAGAACTCAAATTCACACGT 59.773 33.333 4.18 0.00 0.00 4.49
2063 2587 7.531871 CACATTTCTAGAACTCAAATTCACACG 59.468 37.037 4.18 0.00 0.00 4.49
2064 2588 7.324616 GCACATTTCTAGAACTCAAATTCACAC 59.675 37.037 4.18 0.00 0.00 3.82
2065 2589 7.362662 GCACATTTCTAGAACTCAAATTCACA 58.637 34.615 4.18 0.00 0.00 3.58
2066 2590 6.803807 GGCACATTTCTAGAACTCAAATTCAC 59.196 38.462 4.18 0.00 0.00 3.18
2067 2591 6.489700 TGGCACATTTCTAGAACTCAAATTCA 59.510 34.615 4.18 0.00 0.00 2.57
2068 2592 6.913170 TGGCACATTTCTAGAACTCAAATTC 58.087 36.000 4.18 0.00 0.00 2.17
2069 2593 6.899393 TGGCACATTTCTAGAACTCAAATT 57.101 33.333 4.18 0.00 0.00 1.82
2082 2606 7.927629 AATGTGTGGAATAATATGGCACATTTC 59.072 33.333 12.39 0.00 46.93 2.17
2083 2607 7.794041 AATGTGTGGAATAATATGGCACATTT 58.206 30.769 12.39 0.00 46.93 2.32
2087 2611 6.040842 AGGAAATGTGTGGAATAATATGGCAC 59.959 38.462 0.00 0.00 0.00 5.01
2088 2612 6.135454 AGGAAATGTGTGGAATAATATGGCA 58.865 36.000 0.00 0.00 0.00 4.92
2089 2613 6.655078 AGGAAATGTGTGGAATAATATGGC 57.345 37.500 0.00 0.00 0.00 4.40
2094 2618 8.889717 CGTAGTTTAGGAAATGTGTGGAATAAT 58.110 33.333 0.00 0.00 0.00 1.28
2098 2622 5.613329 ACGTAGTTTAGGAAATGTGTGGAA 58.387 37.500 0.00 0.00 37.78 3.53
2099 2623 5.217978 ACGTAGTTTAGGAAATGTGTGGA 57.782 39.130 0.00 0.00 37.78 4.02
2161 2685 6.803154 TTTAGAAAGTTCAGAAGCTTAGGC 57.197 37.500 0.00 0.00 39.06 3.93
2162 2686 9.617975 CAATTTTAGAAAGTTCAGAAGCTTAGG 57.382 33.333 0.00 0.00 0.00 2.69
2169 2693 8.621286 GGTGAGACAATTTTAGAAAGTTCAGAA 58.379 33.333 0.00 0.00 0.00 3.02
2171 2695 8.072567 CAGGTGAGACAATTTTAGAAAGTTCAG 58.927 37.037 0.00 0.00 0.00 3.02
2173 2697 8.154649 TCAGGTGAGACAATTTTAGAAAGTTC 57.845 34.615 0.00 0.00 0.00 3.01
2176 2700 7.363431 GGTTCAGGTGAGACAATTTTAGAAAG 58.637 38.462 0.00 0.00 0.00 2.62
2177 2701 6.264518 GGGTTCAGGTGAGACAATTTTAGAAA 59.735 38.462 0.00 0.00 0.00 2.52
2178 2702 5.768164 GGGTTCAGGTGAGACAATTTTAGAA 59.232 40.000 0.00 0.00 0.00 2.10
2180 2704 5.316987 AGGGTTCAGGTGAGACAATTTTAG 58.683 41.667 0.00 0.00 0.00 1.85
2183 2707 3.884037 AGGGTTCAGGTGAGACAATTT 57.116 42.857 0.00 0.00 0.00 1.82
2185 2709 3.307762 GCTTAGGGTTCAGGTGAGACAAT 60.308 47.826 0.00 0.00 0.00 2.71
2186 2710 2.038557 GCTTAGGGTTCAGGTGAGACAA 59.961 50.000 0.00 0.00 0.00 3.18
2187 2711 1.623811 GCTTAGGGTTCAGGTGAGACA 59.376 52.381 0.00 0.00 0.00 3.41
2188 2712 1.903183 AGCTTAGGGTTCAGGTGAGAC 59.097 52.381 0.00 0.00 0.00 3.36
2189 2713 2.327325 AGCTTAGGGTTCAGGTGAGA 57.673 50.000 0.00 0.00 0.00 3.27
2190 2714 2.979240 GAAGCTTAGGGTTCAGGTGAG 58.021 52.381 11.50 0.00 45.86 3.51
2228 2752 2.616510 CCAAGCTAGGGTTCAGGTGAAG 60.617 54.545 0.00 0.00 34.27 3.02
2253 2777 7.723616 TCACATTCCTTGAAACCTCTAAATTCA 59.276 33.333 0.00 0.00 0.00 2.57
2260 2784 8.477419 TTTTTATCACATTCCTTGAAACCTCT 57.523 30.769 0.00 0.00 0.00 3.69
2261 2785 9.710900 AATTTTTATCACATTCCTTGAAACCTC 57.289 29.630 0.00 0.00 0.00 3.85
2270 2794 9.479549 ACACCTATGAATTTTTATCACATTCCT 57.520 29.630 0.00 0.00 0.00 3.36
2280 2804 5.584649 CGCTCCAGACACCTATGAATTTTTA 59.415 40.000 0.00 0.00 0.00 1.52
2281 2805 4.396166 CGCTCCAGACACCTATGAATTTTT 59.604 41.667 0.00 0.00 0.00 1.94
2292 2816 2.219325 CTCACCTCGCTCCAGACACC 62.219 65.000 0.00 0.00 0.00 4.16
2297 2821 0.034059 ACAAACTCACCTCGCTCCAG 59.966 55.000 0.00 0.00 0.00 3.86
2300 2824 3.614616 CAGATTACAAACTCACCTCGCTC 59.385 47.826 0.00 0.00 0.00 5.03
2301 2825 3.006967 ACAGATTACAAACTCACCTCGCT 59.993 43.478 0.00 0.00 0.00 4.93
2306 2831 8.573035 TGGAATTTTACAGATTACAAACTCACC 58.427 33.333 0.00 0.00 0.00 4.02
2365 2890 9.872757 CACGACACAAATTGTTATAGTAGTTTT 57.127 29.630 0.00 0.00 39.17 2.43
2366 2891 9.048446 ACACGACACAAATTGTTATAGTAGTTT 57.952 29.630 0.00 0.00 39.17 2.66
2367 2892 8.492748 CACACGACACAAATTGTTATAGTAGTT 58.507 33.333 0.00 0.00 39.17 2.24
2368 2893 7.359765 GCACACGACACAAATTGTTATAGTAGT 60.360 37.037 0.00 0.00 39.17 2.73
2369 2894 6.953743 GCACACGACACAAATTGTTATAGTAG 59.046 38.462 0.00 0.00 39.17 2.57
2370 2895 6.424207 TGCACACGACACAAATTGTTATAGTA 59.576 34.615 0.00 0.00 39.17 1.82
2371 2896 5.237561 TGCACACGACACAAATTGTTATAGT 59.762 36.000 0.00 0.00 39.17 2.12
2372 2897 5.684850 TGCACACGACACAAATTGTTATAG 58.315 37.500 0.00 0.00 39.17 1.31
2373 2898 5.674933 TGCACACGACACAAATTGTTATA 57.325 34.783 0.00 0.00 39.17 0.98
2374 2899 4.560136 TGCACACGACACAAATTGTTAT 57.440 36.364 0.00 0.00 39.17 1.89
2375 2900 4.357018 TTGCACACGACACAAATTGTTA 57.643 36.364 0.00 0.00 39.17 2.41
2376 2901 2.929531 TGCACACGACACAAATTGTT 57.070 40.000 0.00 0.00 39.17 2.83
2377 2902 2.929531 TTGCACACGACACAAATTGT 57.070 40.000 0.00 0.00 43.10 2.71
2378 2903 3.611986 AGTTTTGCACACGACACAAATTG 59.388 39.130 0.00 0.00 33.62 2.32
2379 2904 3.843999 AGTTTTGCACACGACACAAATT 58.156 36.364 0.00 0.00 33.62 1.82
2380 2905 3.502191 AGTTTTGCACACGACACAAAT 57.498 38.095 0.00 0.00 33.62 2.32
2381 2906 2.999507 AGTTTTGCACACGACACAAA 57.000 40.000 0.00 0.00 0.00 2.83
2382 2907 3.188667 TGTTAGTTTTGCACACGACACAA 59.811 39.130 0.00 0.00 0.00 3.33
2383 2908 2.742589 TGTTAGTTTTGCACACGACACA 59.257 40.909 0.00 0.00 0.00 3.72
2384 2909 3.392769 TGTTAGTTTTGCACACGACAC 57.607 42.857 0.00 0.00 0.00 3.67
2389 2914 6.551736 TCTTTCTCTTGTTAGTTTTGCACAC 58.448 36.000 0.00 0.00 0.00 3.82
2399 2924 9.007901 ACAAGGAATCATTCTTTCTCTTGTTAG 57.992 33.333 11.23 0.00 39.19 2.34
2404 2929 5.184671 GGCACAAGGAATCATTCTTTCTCTT 59.815 40.000 0.00 0.00 0.00 2.85
2424 2951 8.480643 AAGCTTAATCGATAGTAATATGGCAC 57.519 34.615 0.00 0.00 37.40 5.01
2429 2956 9.155975 CCTGCAAAGCTTAATCGATAGTAATAT 57.844 33.333 0.00 0.00 37.40 1.28
2460 2987 4.074970 GGACATGGGGATGCTAGTAATTG 58.925 47.826 0.00 0.00 0.00 2.32
2466 2993 0.399454 CCTGGACATGGGGATGCTAG 59.601 60.000 0.00 0.00 0.00 3.42
2503 3031 6.670077 GGTTTTGCACCTTTGAATTTAACA 57.330 33.333 0.00 0.00 43.29 2.41
2538 3066 3.490419 CGACCCTCCTAATCTTTACCACG 60.490 52.174 0.00 0.00 0.00 4.94
2560 3119 5.228665 ACGTAGAACCTTTGAAGACTAAGC 58.771 41.667 0.00 0.00 0.00 3.09
2561 3120 8.081025 AGTTACGTAGAACCTTTGAAGACTAAG 58.919 37.037 0.00 0.00 0.00 2.18
2591 3150 7.127339 ACCTCTCCACACACCTATGTATTATTT 59.873 37.037 0.00 0.00 36.72 1.40
2611 3170 7.493971 CAGCTGCCACATATATATAAACCTCTC 59.506 40.741 0.00 0.00 0.00 3.20
2623 3182 8.462589 TGATTATTTTTCAGCTGCCACATATA 57.537 30.769 9.47 0.00 0.00 0.86
2699 3296 6.636447 TGCGTTGTGAAAAATGACAAAGATAG 59.364 34.615 0.00 0.00 0.00 2.08
2704 3301 4.867047 ACATGCGTTGTGAAAAATGACAAA 59.133 33.333 0.00 0.00 37.11 2.83
2739 3336 9.869757 AATGATAGGCCACAAAAATTAACTTAC 57.130 29.630 5.01 0.00 0.00 2.34
2741 3338 9.435688 GAAATGATAGGCCACAAAAATTAACTT 57.564 29.630 5.01 0.00 0.00 2.66
2743 3340 8.770438 TGAAATGATAGGCCACAAAAATTAAC 57.230 30.769 5.01 0.00 0.00 2.01
2746 3343 7.712205 GCTATGAAATGATAGGCCACAAAAATT 59.288 33.333 5.01 0.00 0.00 1.82
2748 3345 6.154192 TGCTATGAAATGATAGGCCACAAAAA 59.846 34.615 5.01 0.00 0.00 1.94
2776 3374 6.874288 TTTTTAAAATCATGGTTTGCAGGG 57.126 33.333 4.33 0.00 0.00 4.45
2792 3410 6.658188 ATGAACCTTGGACCGATTTTTAAA 57.342 33.333 0.00 0.00 0.00 1.52
2808 3426 7.924358 AACCCTAAACCTTTAAAATGAACCT 57.076 32.000 0.00 0.00 0.00 3.50
2842 3461 2.433970 ACAACCCCAAACCATGAAACTG 59.566 45.455 0.00 0.00 0.00 3.16
2843 3462 2.758130 ACAACCCCAAACCATGAAACT 58.242 42.857 0.00 0.00 0.00 2.66
2851 3470 3.499537 CGTCTAACTAACAACCCCAAACC 59.500 47.826 0.00 0.00 0.00 3.27
2862 3481 6.356757 ACTATCGGACTTCGTCTAACTAAC 57.643 41.667 0.00 0.00 40.32 2.34
2864 3483 6.108687 TGAACTATCGGACTTCGTCTAACTA 58.891 40.000 0.00 0.00 40.32 2.24
2865 3484 4.940046 TGAACTATCGGACTTCGTCTAACT 59.060 41.667 0.00 0.00 40.32 2.24
2866 3485 5.227238 TGAACTATCGGACTTCGTCTAAC 57.773 43.478 0.00 0.00 40.32 2.34
2868 3487 3.875727 CCTGAACTATCGGACTTCGTCTA 59.124 47.826 0.00 0.00 40.32 2.59
2869 3488 2.683867 CCTGAACTATCGGACTTCGTCT 59.316 50.000 0.00 0.00 40.32 4.18
2872 3491 1.749634 ACCCTGAACTATCGGACTTCG 59.250 52.381 0.00 0.00 40.90 3.79
2873 3492 3.194968 TGAACCCTGAACTATCGGACTTC 59.805 47.826 0.00 0.00 33.44 3.01
2878 3497 4.324267 AGTTTTGAACCCTGAACTATCGG 58.676 43.478 0.00 0.00 31.05 4.18
2901 3520 6.606395 GGACAGAGGGAGTAACTAACATTCTA 59.394 42.308 0.00 0.00 0.00 2.10
2903 3522 5.395435 GGGACAGAGGGAGTAACTAACATTC 60.395 48.000 0.00 0.00 0.00 2.67
2923 3542 7.254227 TGCAAAACGTCTTATATTATGGGAC 57.746 36.000 0.00 0.00 0.00 4.46
2924 3543 7.468084 GCTTGCAAAACGTCTTATATTATGGGA 60.468 37.037 0.00 0.00 0.00 4.37
2925 3544 6.636850 GCTTGCAAAACGTCTTATATTATGGG 59.363 38.462 0.00 0.00 0.00 4.00
2926 3545 7.417612 AGCTTGCAAAACGTCTTATATTATGG 58.582 34.615 0.00 0.00 0.00 2.74
2929 3548 9.104965 ACATAGCTTGCAAAACGTCTTATATTA 57.895 29.630 0.00 0.00 0.00 0.98
2930 3549 7.985476 ACATAGCTTGCAAAACGTCTTATATT 58.015 30.769 0.00 0.00 0.00 1.28
2931 3550 7.553881 ACATAGCTTGCAAAACGTCTTATAT 57.446 32.000 0.00 0.00 0.00 0.86
2932 3551 6.978343 ACATAGCTTGCAAAACGTCTTATA 57.022 33.333 0.00 0.00 0.00 0.98
2933 3552 5.880054 ACATAGCTTGCAAAACGTCTTAT 57.120 34.783 0.00 0.00 0.00 1.73
2934 3553 5.682943 AACATAGCTTGCAAAACGTCTTA 57.317 34.783 0.00 0.00 0.00 2.10
2935 3554 4.568152 AACATAGCTTGCAAAACGTCTT 57.432 36.364 0.00 0.00 0.00 3.01
2936 3555 4.154195 CCTAACATAGCTTGCAAAACGTCT 59.846 41.667 0.00 0.00 0.00 4.18
2937 3556 4.083484 ACCTAACATAGCTTGCAAAACGTC 60.083 41.667 0.00 0.00 0.00 4.34
2938 3557 3.818773 ACCTAACATAGCTTGCAAAACGT 59.181 39.130 0.00 0.00 0.00 3.99
2939 3558 4.419522 ACCTAACATAGCTTGCAAAACG 57.580 40.909 0.00 0.00 0.00 3.60
2940 3559 4.385748 GCAACCTAACATAGCTTGCAAAAC 59.614 41.667 0.00 0.00 43.48 2.43
2941 3560 4.555262 GCAACCTAACATAGCTTGCAAAA 58.445 39.130 0.00 0.00 43.48 2.44
2942 3561 4.173036 GCAACCTAACATAGCTTGCAAA 57.827 40.909 0.00 0.00 43.48 3.68
2943 3562 3.848272 GCAACCTAACATAGCTTGCAA 57.152 42.857 10.88 0.00 43.48 4.08
2945 3564 3.848272 TTGCAACCTAACATAGCTTGC 57.152 42.857 0.00 9.44 44.00 4.01
2946 3565 6.646240 ACATTTTTGCAACCTAACATAGCTTG 59.354 34.615 0.00 0.00 0.00 4.01
2947 3566 6.758254 ACATTTTTGCAACCTAACATAGCTT 58.242 32.000 0.00 0.00 0.00 3.74
2948 3567 6.209391 AGACATTTTTGCAACCTAACATAGCT 59.791 34.615 0.00 0.00 0.00 3.32
2949 3568 6.389906 AGACATTTTTGCAACCTAACATAGC 58.610 36.000 0.00 0.00 0.00 2.97
2957 3576 8.199449 CCATGATATAAGACATTTTTGCAACCT 58.801 33.333 0.00 0.00 0.00 3.50
2958 3577 7.439056 CCCATGATATAAGACATTTTTGCAACC 59.561 37.037 0.00 0.00 0.00 3.77
2959 3578 8.196771 TCCCATGATATAAGACATTTTTGCAAC 58.803 33.333 0.00 0.00 0.00 4.17
2960 3579 8.196771 GTCCCATGATATAAGACATTTTTGCAA 58.803 33.333 0.00 0.00 0.00 4.08
2961 3580 7.468494 CGTCCCATGATATAAGACATTTTTGCA 60.468 37.037 0.00 0.00 0.00 4.08
2962 3581 6.857964 CGTCCCATGATATAAGACATTTTTGC 59.142 38.462 0.00 0.00 0.00 3.68
2963 3582 8.153479 TCGTCCCATGATATAAGACATTTTTG 57.847 34.615 0.00 0.00 0.00 2.44
2964 3583 8.746052 TTCGTCCCATGATATAAGACATTTTT 57.254 30.769 0.00 0.00 0.00 1.94
2965 3584 7.445402 CCTTCGTCCCATGATATAAGACATTTT 59.555 37.037 0.00 0.00 0.00 1.82
2966 3585 6.936900 CCTTCGTCCCATGATATAAGACATTT 59.063 38.462 0.00 0.00 0.00 2.32
2967 3586 6.467677 CCTTCGTCCCATGATATAAGACATT 58.532 40.000 0.00 0.00 0.00 2.71
2968 3587 5.046304 CCCTTCGTCCCATGATATAAGACAT 60.046 44.000 0.00 0.00 0.00 3.06
2969 3588 4.283467 CCCTTCGTCCCATGATATAAGACA 59.717 45.833 0.00 0.00 0.00 3.41
2970 3589 4.527038 TCCCTTCGTCCCATGATATAAGAC 59.473 45.833 0.00 0.00 0.00 3.01
2971 3590 4.747583 TCCCTTCGTCCCATGATATAAGA 58.252 43.478 0.00 0.00 0.00 2.10
2972 3591 4.528596 ACTCCCTTCGTCCCATGATATAAG 59.471 45.833 0.00 0.00 0.00 1.73
2973 3592 4.489737 ACTCCCTTCGTCCCATGATATAA 58.510 43.478 0.00 0.00 0.00 0.98
2974 3593 4.127918 ACTCCCTTCGTCCCATGATATA 57.872 45.455 0.00 0.00 0.00 0.86
2975 3594 2.977808 ACTCCCTTCGTCCCATGATAT 58.022 47.619 0.00 0.00 0.00 1.63
2976 3595 2.471815 ACTCCCTTCGTCCCATGATA 57.528 50.000 0.00 0.00 0.00 2.15
2977 3596 2.471815 TACTCCCTTCGTCCCATGAT 57.528 50.000 0.00 0.00 0.00 2.45
2978 3597 2.039418 CATACTCCCTTCGTCCCATGA 58.961 52.381 0.00 0.00 0.00 3.07
2979 3598 1.762957 ACATACTCCCTTCGTCCCATG 59.237 52.381 0.00 0.00 0.00 3.66
2980 3599 2.170607 CAACATACTCCCTTCGTCCCAT 59.829 50.000 0.00 0.00 0.00 4.00
2981 3600 1.553248 CAACATACTCCCTTCGTCCCA 59.447 52.381 0.00 0.00 0.00 4.37
2982 3601 1.742750 GCAACATACTCCCTTCGTCCC 60.743 57.143 0.00 0.00 0.00 4.46
2983 3602 1.066430 TGCAACATACTCCCTTCGTCC 60.066 52.381 0.00 0.00 0.00 4.79
2984 3603 2.000447 GTGCAACATACTCCCTTCGTC 59.000 52.381 0.00 0.00 36.32 4.20
2985 3604 1.623811 AGTGCAACATACTCCCTTCGT 59.376 47.619 0.00 0.00 41.43 3.85
2986 3605 2.002586 CAGTGCAACATACTCCCTTCG 58.997 52.381 0.00 0.00 41.43 3.79
2987 3606 3.059352 ACAGTGCAACATACTCCCTTC 57.941 47.619 0.00 0.00 41.43 3.46
2988 3607 3.508845 AACAGTGCAACATACTCCCTT 57.491 42.857 0.00 0.00 41.43 3.95
2989 3608 3.073062 AGAAACAGTGCAACATACTCCCT 59.927 43.478 0.00 0.00 41.43 4.20
2990 3609 3.412386 AGAAACAGTGCAACATACTCCC 58.588 45.455 0.00 0.00 41.43 4.30
2991 3610 5.479306 TCTAGAAACAGTGCAACATACTCC 58.521 41.667 0.00 0.00 41.43 3.85
2992 3611 6.813649 TGATCTAGAAACAGTGCAACATACTC 59.186 38.462 0.00 0.00 41.43 2.59
2993 3612 6.701340 TGATCTAGAAACAGTGCAACATACT 58.299 36.000 0.00 0.00 41.43 2.12
2994 3613 6.968131 TGATCTAGAAACAGTGCAACATAC 57.032 37.500 0.00 0.00 41.43 2.39
2995 3614 9.264719 CATATGATCTAGAAACAGTGCAACATA 57.735 33.333 0.00 0.00 41.43 2.29
2996 3615 7.989170 TCATATGATCTAGAAACAGTGCAACAT 59.011 33.333 0.00 0.00 41.43 2.71
2997 3616 7.330262 TCATATGATCTAGAAACAGTGCAACA 58.670 34.615 0.00 0.00 41.43 3.33
2998 3617 7.776933 TCATATGATCTAGAAACAGTGCAAC 57.223 36.000 0.00 0.00 0.00 4.17
2999 3618 8.791327 TTTCATATGATCTAGAAACAGTGCAA 57.209 30.769 6.17 0.00 0.00 4.08
3000 3619 8.791327 TTTTCATATGATCTAGAAACAGTGCA 57.209 30.769 6.17 0.00 30.47 4.57
3057 3676 6.018669 GGTGTAATTCTCTCGACCAATGATTC 60.019 42.308 0.00 0.00 0.00 2.52
3069 3688 9.358872 GAAATTCCATTTTGGTGTAATTCTCTC 57.641 33.333 0.00 0.00 39.03 3.20
3071 3690 9.487790 TTGAAATTCCATTTTGGTGTAATTCTC 57.512 29.630 0.00 0.00 39.03 2.87
3073 3692 9.271828 ACTTGAAATTCCATTTTGGTGTAATTC 57.728 29.630 0.00 0.00 39.03 2.17
3273 3893 6.751514 TCGTGGAATGCAAAACTATACAAT 57.248 33.333 0.00 0.00 0.00 2.71
3280 3900 6.200097 GTGTAAATTTCGTGGAATGCAAAACT 59.800 34.615 0.00 0.00 0.00 2.66
3281 3901 6.019479 TGTGTAAATTTCGTGGAATGCAAAAC 60.019 34.615 0.00 0.00 0.00 2.43
3295 3915 6.140737 CGAACTTCTTGCAGTGTGTAAATTTC 59.859 38.462 0.00 0.00 0.00 2.17
3296 3916 5.971202 CGAACTTCTTGCAGTGTGTAAATTT 59.029 36.000 0.00 0.00 0.00 1.82
3297 3917 5.295787 TCGAACTTCTTGCAGTGTGTAAATT 59.704 36.000 0.00 0.00 0.00 1.82
3305 3925 2.473816 TCACTCGAACTTCTTGCAGTG 58.526 47.619 0.00 0.00 33.90 3.66
3326 3946 8.781196 GCTGTCTGTGAATCATGTGATATAAAT 58.219 33.333 0.00 0.00 33.73 1.40
3329 3949 6.703165 GTGCTGTCTGTGAATCATGTGATATA 59.297 38.462 0.00 0.00 33.73 0.86
3331 3951 4.872124 GTGCTGTCTGTGAATCATGTGATA 59.128 41.667 0.00 0.00 33.73 2.15
3333 3953 3.069289 GTGCTGTCTGTGAATCATGTGA 58.931 45.455 0.00 0.00 0.00 3.58
3340 3960 4.924305 AACAATTGTGCTGTCTGTGAAT 57.076 36.364 12.82 0.00 0.00 2.57
3370 3991 0.675837 GCCGGTGTACTCCCCTTTTC 60.676 60.000 1.90 0.00 0.00 2.29
3380 4001 1.521681 GATGCAGAGGCCGGTGTAC 60.522 63.158 1.90 0.00 40.13 2.90
3409 4032 7.754475 TGATTCACGTTCAATAAAATGGATGTG 59.246 33.333 2.20 2.20 44.07 3.21
3410 4033 7.825681 TGATTCACGTTCAATAAAATGGATGT 58.174 30.769 0.00 0.00 0.00 3.06
3424 4047 5.198274 GTGACTTGAACTTGATTCACGTTC 58.802 41.667 22.45 22.45 46.68 3.95
3447 4070 5.571784 TTGTATTACTGTCTGGTACTCGG 57.428 43.478 0.00 0.00 0.00 4.63
3449 4072 8.597662 TTTGTTTGTATTACTGTCTGGTACTC 57.402 34.615 0.00 0.00 0.00 2.59
3471 4094 7.126726 TCAATTGTGGTTGTGTTTCTTTTTG 57.873 32.000 5.13 0.00 0.00 2.44
3539 4166 9.859427 TTTATTCAATCAATTTGACTAGCAAGG 57.141 29.630 0.15 0.00 43.99 3.61
3548 4175 9.083422 TGTGTAGGGTTTATTCAATCAATTTGA 57.917 29.630 0.75 0.75 42.62 2.69
3553 4180 6.209788 GGGTTGTGTAGGGTTTATTCAATCAA 59.790 38.462 0.00 0.00 0.00 2.57
3556 4183 5.899278 AGGGTTGTGTAGGGTTTATTCAAT 58.101 37.500 0.00 0.00 0.00 2.57
3565 4192 1.423921 CTGGAAAGGGTTGTGTAGGGT 59.576 52.381 0.00 0.00 0.00 4.34
3566 4193 1.886655 GCTGGAAAGGGTTGTGTAGGG 60.887 57.143 0.00 0.00 0.00 3.53
3567 4194 1.534729 GCTGGAAAGGGTTGTGTAGG 58.465 55.000 0.00 0.00 0.00 3.18
3624 4251 6.663093 TGTGGTTTATTGCCTCTCAATGTAAT 59.337 34.615 0.82 0.00 44.62 1.89
3646 4273 6.206395 TCATGTTTGGTAAGCCATATTGTG 57.794 37.500 0.00 0.00 45.56 3.33
3648 4275 8.169977 AGTATCATGTTTGGTAAGCCATATTG 57.830 34.615 0.00 0.00 45.56 1.90
3731 4362 1.409427 GCCTGTACGATAGAGCAAGGT 59.591 52.381 0.00 0.00 41.38 3.50
3905 4536 3.732212 CGCCATGTAGATCAGAATTCCA 58.268 45.455 0.65 0.00 0.00 3.53
3916 4547 2.110352 TCGACGAGCGCCATGTAGA 61.110 57.895 2.29 3.13 40.61 2.59
4201 4832 9.781834 AAACAAATGTACATGTATATTTCACCG 57.218 29.630 27.92 21.27 35.58 4.94
4300 4931 3.689347 ACACATAGTTGTCATGCACCAT 58.311 40.909 0.00 0.00 32.34 3.55
4378 5009 7.148120 TGCATGAAATGGTTTTGTGTTTTGATT 60.148 29.630 0.00 0.00 46.86 2.57
4407 5070 1.068083 CCACGCCAGTATGATCGCT 59.932 57.895 0.00 0.00 39.69 4.93
4408 5071 1.956170 CCCACGCCAGTATGATCGC 60.956 63.158 0.00 0.00 39.69 4.58
4409 5072 0.875908 CACCCACGCCAGTATGATCG 60.876 60.000 0.00 0.00 39.69 3.69
4410 5073 0.178068 ACACCCACGCCAGTATGATC 59.822 55.000 0.00 0.00 39.69 2.92
4411 5074 0.107703 CACACCCACGCCAGTATGAT 60.108 55.000 0.00 0.00 39.69 2.45
4412 5075 1.295101 CACACCCACGCCAGTATGA 59.705 57.895 0.00 0.00 39.69 2.15
4413 5076 1.745115 CCACACCCACGCCAGTATG 60.745 63.158 0.00 0.00 0.00 2.39
4414 5077 2.221299 ACCACACCCACGCCAGTAT 61.221 57.895 0.00 0.00 0.00 2.12
4415 5078 2.845317 ACCACACCCACGCCAGTA 60.845 61.111 0.00 0.00 0.00 2.74
4416 5079 4.562425 CACCACACCCACGCCAGT 62.562 66.667 0.00 0.00 0.00 4.00
4417 5080 4.562425 ACACCACACCCACGCCAG 62.562 66.667 0.00 0.00 0.00 4.85
4418 5081 4.866224 CACACCACACCCACGCCA 62.866 66.667 0.00 0.00 0.00 5.69
4421 5084 4.901123 TCGCACACCACACCCACG 62.901 66.667 0.00 0.00 0.00 4.94
4422 5085 2.281484 ATCGCACACCACACCCAC 60.281 61.111 0.00 0.00 0.00 4.61
4423 5086 2.281414 CATCGCACACCACACCCA 60.281 61.111 0.00 0.00 0.00 4.51
4424 5087 0.960364 ATTCATCGCACACCACACCC 60.960 55.000 0.00 0.00 0.00 4.61
4425 5088 0.168788 CATTCATCGCACACCACACC 59.831 55.000 0.00 0.00 0.00 4.16
4426 5089 0.454957 GCATTCATCGCACACCACAC 60.455 55.000 0.00 0.00 0.00 3.82
4427 5090 0.888285 TGCATTCATCGCACACCACA 60.888 50.000 0.00 0.00 33.55 4.17
4428 5091 0.452987 ATGCATTCATCGCACACCAC 59.547 50.000 0.00 0.00 43.35 4.16
4429 5092 0.452585 CATGCATTCATCGCACACCA 59.547 50.000 0.00 0.00 43.35 4.17
4430 5093 0.452987 ACATGCATTCATCGCACACC 59.547 50.000 0.00 0.00 43.35 4.16
4431 5094 1.541475 CACATGCATTCATCGCACAC 58.459 50.000 0.00 0.00 43.35 3.82
4432 5095 0.179158 GCACATGCATTCATCGCACA 60.179 50.000 0.00 0.00 43.35 4.57
4433 5096 2.573802 GCACATGCATTCATCGCAC 58.426 52.632 0.00 0.00 43.35 5.34
4444 5107 1.879380 TGGAGTACAAAGTGCACATGC 59.121 47.619 21.04 5.05 42.50 4.06
4445 5108 3.402110 TCTGGAGTACAAAGTGCACATG 58.598 45.455 21.04 19.23 0.00 3.21
4446 5109 3.769739 TCTGGAGTACAAAGTGCACAT 57.230 42.857 21.04 3.48 0.00 3.21
4447 5110 3.118408 ACTTCTGGAGTACAAAGTGCACA 60.118 43.478 21.04 0.00 36.65 4.57
4448 5111 3.467803 ACTTCTGGAGTACAAAGTGCAC 58.532 45.455 9.40 9.40 36.65 4.57
4452 5115 8.974060 TTCATTTTACTTCTGGAGTACAAAGT 57.026 30.769 0.00 7.70 40.51 2.66
4541 5204 1.537990 GGGTGCACACATTGTTTGGTC 60.538 52.381 20.43 0.00 0.00 4.02
4554 5217 3.982241 GCTTGCCACAGGGTGCAC 61.982 66.667 8.80 8.80 36.17 4.57
4561 5224 1.868997 CTAACCACGCTTGCCACAG 59.131 57.895 0.00 0.00 0.00 3.66
4601 5264 9.362539 CCGGGATAATAATTGTACATACACTAC 57.637 37.037 0.00 0.00 35.64 2.73
4602 5265 9.092338 ACCGGGATAATAATTGTACATACACTA 57.908 33.333 6.32 0.00 35.64 2.74
4603 5266 7.970102 ACCGGGATAATAATTGTACATACACT 58.030 34.615 6.32 0.00 35.64 3.55
4604 5267 8.611654 AACCGGGATAATAATTGTACATACAC 57.388 34.615 6.32 0.00 35.64 2.90
4605 5268 9.709495 GTAACCGGGATAATAATTGTACATACA 57.291 33.333 6.32 0.00 0.00 2.29
4629 5770 7.054124 GGGGAGTCTCACATTTAATTGATGTA 58.946 38.462 4.08 0.00 36.04 2.29
4644 5785 4.710167 TCGACGCGGGGAGTCTCA 62.710 66.667 12.47 0.00 36.53 3.27
4731 5872 3.798511 GCGGGAGGGGAGGGAAAG 61.799 72.222 0.00 0.00 0.00 2.62
4797 5938 4.521062 CGAGAAGAGGCCCGGCTG 62.521 72.222 9.86 0.00 0.00 4.85
4824 7238 2.996621 CGAGATGGGTGTGAAAGAGAAC 59.003 50.000 0.00 0.00 0.00 3.01
4860 7274 6.526526 GTTCTTCTTTAGAGACTGTCCCTTT 58.473 40.000 3.76 0.00 33.51 3.11
4869 7283 7.254151 GCCAATGTATCGTTCTTCTTTAGAGAC 60.254 40.741 0.00 0.00 33.51 3.36
4874 7288 7.624360 AATGCCAATGTATCGTTCTTCTTTA 57.376 32.000 0.00 0.00 0.00 1.85
4885 7299 4.380233 GGCTGCTGATAATGCCAATGTATC 60.380 45.833 0.00 0.00 44.34 2.24
4886 7300 3.508793 GGCTGCTGATAATGCCAATGTAT 59.491 43.478 0.00 0.00 44.34 2.29
4888 7302 1.684983 GGCTGCTGATAATGCCAATGT 59.315 47.619 0.00 0.00 44.34 2.71
4925 7339 3.560068 GCATAAAGTACTCATTGGGTCGG 59.440 47.826 0.00 0.00 0.00 4.79
4928 7342 5.435686 TCAGCATAAAGTACTCATTGGGT 57.564 39.130 0.00 0.00 0.00 4.51
4943 7357 1.810151 GCCCGTGAAAGTTTCAGCATA 59.190 47.619 18.56 0.00 41.01 3.14
4954 7368 2.112297 GTCACCCAGCCCGTGAAA 59.888 61.111 0.12 0.00 41.70 2.69
4968 7382 4.096681 ACTCATGAACTATCACAGGGTCA 58.903 43.478 0.00 0.00 38.69 4.02
4969 7383 4.744795 ACTCATGAACTATCACAGGGTC 57.255 45.455 0.00 0.00 38.69 4.46
4970 7384 4.287067 ACAACTCATGAACTATCACAGGGT 59.713 41.667 0.00 0.00 38.69 4.34
4976 7390 4.455533 GGTTGCACAACTCATGAACTATCA 59.544 41.667 12.87 0.00 40.94 2.15
4979 7393 4.065088 GAGGTTGCACAACTCATGAACTA 58.935 43.478 12.87 0.00 40.94 2.24
4990 7404 2.664851 CCGCGAGAGGTTGCACAA 60.665 61.111 8.23 0.00 31.63 3.33
4993 7407 4.069232 CTCCCGCGAGAGGTTGCA 62.069 66.667 10.16 0.00 38.52 4.08
5003 7417 4.824166 CCGACGTACACTCCCGCG 62.824 72.222 0.00 0.00 0.00 6.46
5004 7418 1.922135 TTACCGACGTACACTCCCGC 61.922 60.000 0.00 0.00 0.00 6.13
5005 7419 0.734889 ATTACCGACGTACACTCCCG 59.265 55.000 0.00 0.00 0.00 5.14
5006 7420 2.424956 AGAATTACCGACGTACACTCCC 59.575 50.000 0.00 0.00 0.00 4.30
5007 7421 3.772060 AGAATTACCGACGTACACTCC 57.228 47.619 0.00 0.00 0.00 3.85
5008 7422 4.201561 GCAAAGAATTACCGACGTACACTC 60.202 45.833 0.00 0.00 0.00 3.51
5009 7423 3.676646 GCAAAGAATTACCGACGTACACT 59.323 43.478 0.00 0.00 0.00 3.55
5010 7424 3.480825 CGCAAAGAATTACCGACGTACAC 60.481 47.826 0.00 0.00 0.00 2.90
5011 7425 2.662637 CGCAAAGAATTACCGACGTACA 59.337 45.455 0.00 0.00 0.00 2.90
5012 7426 2.663119 ACGCAAAGAATTACCGACGTAC 59.337 45.455 0.00 0.00 0.00 3.67
5013 7427 2.662637 CACGCAAAGAATTACCGACGTA 59.337 45.455 0.00 0.00 0.00 3.57
5014 7428 1.458064 CACGCAAAGAATTACCGACGT 59.542 47.619 0.00 0.00 0.00 4.34
5015 7429 1.201877 CCACGCAAAGAATTACCGACG 60.202 52.381 0.00 0.00 0.00 5.12
5016 7430 1.802365 ACCACGCAAAGAATTACCGAC 59.198 47.619 0.00 0.00 0.00 4.79
5017 7431 1.801771 CACCACGCAAAGAATTACCGA 59.198 47.619 0.00 0.00 0.00 4.69
5018 7432 1.135803 CCACCACGCAAAGAATTACCG 60.136 52.381 0.00 0.00 0.00 4.02
5019 7433 1.201414 CCCACCACGCAAAGAATTACC 59.799 52.381 0.00 0.00 0.00 2.85
5020 7434 2.156098 TCCCACCACGCAAAGAATTAC 58.844 47.619 0.00 0.00 0.00 1.89
5021 7435 2.554893 GTTCCCACCACGCAAAGAATTA 59.445 45.455 0.00 0.00 0.00 1.40
5022 7436 1.339929 GTTCCCACCACGCAAAGAATT 59.660 47.619 0.00 0.00 0.00 2.17
5023 7437 0.958822 GTTCCCACCACGCAAAGAAT 59.041 50.000 0.00 0.00 0.00 2.40
5024 7438 0.394488 TGTTCCCACCACGCAAAGAA 60.394 50.000 0.00 0.00 0.00 2.52
5025 7439 1.098712 GTGTTCCCACCACGCAAAGA 61.099 55.000 0.00 0.00 35.44 2.52
5026 7440 1.358759 GTGTTCCCACCACGCAAAG 59.641 57.895 0.00 0.00 35.44 2.77
5027 7441 0.753479 ATGTGTTCCCACCACGCAAA 60.753 50.000 0.00 0.00 41.09 3.68
5028 7442 0.108774 TATGTGTTCCCACCACGCAA 59.891 50.000 0.00 0.00 41.09 4.85
5029 7443 0.326595 ATATGTGTTCCCACCACGCA 59.673 50.000 0.00 0.00 41.09 5.24
5030 7444 0.732571 CATATGTGTTCCCACCACGC 59.267 55.000 0.00 0.00 41.09 5.34
5031 7445 2.006888 GTCATATGTGTTCCCACCACG 58.993 52.381 1.90 0.00 41.09 4.94
5032 7446 2.006888 CGTCATATGTGTTCCCACCAC 58.993 52.381 1.90 0.00 41.09 4.16
5033 7447 1.903183 TCGTCATATGTGTTCCCACCA 59.097 47.619 1.90 0.00 41.09 4.17
5034 7448 2.684001 TCGTCATATGTGTTCCCACC 57.316 50.000 1.90 0.00 41.09 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.