Multiple sequence alignment - TraesCS4A01G023000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G023000 chr4A 100.000 5495 0 0 1 5495 16459586 16465080 0.000000e+00 10148.0
1 TraesCS4A01G023000 chr4D 93.541 3592 155 42 548 4120 450223378 450219845 0.000000e+00 5276.0
2 TraesCS4A01G023000 chr4D 92.169 779 36 15 4724 5495 450208989 450208229 0.000000e+00 1077.0
3 TraesCS4A01G023000 chr4D 90.088 565 25 11 1 563 450223956 450223421 0.000000e+00 704.0
4 TraesCS4A01G023000 chr4D 95.000 180 5 4 4732 4910 450210271 450210095 4.190000e-71 279.0
5 TraesCS4A01G023000 chr4D 92.105 114 5 3 4176 4286 450218352 450218240 2.050000e-34 158.0
6 TraesCS4A01G023000 chr4D 96.721 61 2 0 4273 4333 450218224 450218164 9.740000e-18 102.0
7 TraesCS4A01G023000 chr4D 93.220 59 4 0 4126 4184 450219813 450219755 2.730000e-13 87.9
8 TraesCS4A01G023000 chr4B 93.640 3129 125 38 1 3119 563227667 563224603 0.000000e+00 4608.0
9 TraesCS4A01G023000 chr4B 92.615 826 32 17 4691 5495 563215749 563214932 0.000000e+00 1160.0
10 TraesCS4A01G023000 chr4B 91.028 457 22 6 3132 3577 563224501 563224053 2.830000e-167 599.0
11 TraesCS4A01G023000 chr4B 90.909 286 17 4 3576 3855 563224013 563223731 5.200000e-100 375.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G023000 chr4A 16459586 16465080 5494 False 10148.000000 10148 100.0000 1 5495 1 chr4A.!!$F1 5494
1 TraesCS4A01G023000 chr4D 450218164 450223956 5792 True 1265.580000 5276 93.1350 1 4333 5 chr4D.!!$R2 4332
2 TraesCS4A01G023000 chr4D 450208229 450210271 2042 True 678.000000 1077 93.5845 4724 5495 2 chr4D.!!$R1 771
3 TraesCS4A01G023000 chr4B 563223731 563227667 3936 True 1860.666667 4608 91.8590 1 3855 3 chr4B.!!$R2 3854
4 TraesCS4A01G023000 chr4B 563214932 563215749 817 True 1160.000000 1160 92.6150 4691 5495 1 chr4B.!!$R1 804

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
602 660 0.108804 GGATTCTCGGAACAGCACGA 60.109 55.0 0.00 0.0 37.56 4.35 F
662 720 0.314935 ACCGCGTCTAAAACCGAAGA 59.685 50.0 4.92 0.0 0.00 2.87 F
812 870 0.320421 AACACACTCGAATCCACCCG 60.320 55.0 0.00 0.0 0.00 5.28 F
1536 1596 0.402504 ATGCGGTGTTGAAGGGGTTA 59.597 50.0 0.00 0.0 0.00 2.85 F
2709 2769 0.610232 ATGTTGCAGCTGGGAACTCC 60.610 55.0 17.12 0.0 46.85 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1870 1930 0.102120 CTAACTCTCAGCGCCTCCAG 59.898 60.000 2.29 0.0 0.0 3.86 R
1900 1960 1.591183 GCAAACATCCACGGCCAAT 59.409 52.632 2.24 0.0 0.0 3.16 R
1980 2040 1.696336 TCAGTCAAAAGCTCCTCTGCT 59.304 47.619 0.00 0.0 46.4 4.24 R
3352 3510 0.036577 AGCATGCTATCCTCCGATGC 60.037 55.000 21.21 0.0 39.8 3.91 R
4573 6252 0.096976 CGCGCAATCAATCCGAACTT 59.903 50.000 8.75 0.0 0.0 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 4.182433 TCCCTGCGTGTGTGGCAA 62.182 61.111 0.00 0.00 40.39 4.52
473 480 1.398960 GCTGCTTAAATAGATGCGGCG 60.399 52.381 0.51 0.51 45.75 6.46
505 512 4.770874 CCGGGTCGGTTTCGCCAT 62.771 66.667 0.00 0.00 42.73 4.40
544 551 3.106407 GTCGTGCTGTCGCCTGTC 61.106 66.667 0.00 0.00 34.43 3.51
581 639 4.385405 AGCGTGGAGTGCTGGAGC 62.385 66.667 0.00 0.00 42.14 4.70
586 644 3.474570 GGAGTGCTGGAGCCGGAT 61.475 66.667 5.05 0.00 41.18 4.18
602 660 0.108804 GGATTCTCGGAACAGCACGA 60.109 55.000 0.00 0.00 37.56 4.35
603 661 1.471676 GGATTCTCGGAACAGCACGAT 60.472 52.381 0.00 0.00 38.56 3.73
628 686 2.093658 TCAGCCCGTGGAGTCTTTAATC 60.094 50.000 0.00 0.00 0.00 1.75
662 720 0.314935 ACCGCGTCTAAAACCGAAGA 59.685 50.000 4.92 0.00 0.00 2.87
710 768 0.899720 TAGAAAGCGGGTCCAACGAT 59.100 50.000 0.00 0.00 0.00 3.73
749 807 2.764010 AGAAGGTGGGTTTGTTTGGTTC 59.236 45.455 0.00 0.00 0.00 3.62
811 869 1.156736 CAACACACTCGAATCCACCC 58.843 55.000 0.00 0.00 0.00 4.61
812 870 0.320421 AACACACTCGAATCCACCCG 60.320 55.000 0.00 0.00 0.00 5.28
814 872 2.283529 ACACTCGAATCCACCCGCT 61.284 57.895 0.00 0.00 0.00 5.52
884 944 2.507102 CGTAGCCACCAGACGCTG 60.507 66.667 0.00 0.52 36.53 5.18
1128 1188 2.284405 ACCTACACCCAGTCCCGG 60.284 66.667 0.00 0.00 0.00 5.73
1324 1384 2.418368 TAACATCATGGTCCACAGCC 57.582 50.000 0.00 0.00 0.00 4.85
1353 1413 2.694109 AGCCCTACAGTTCGATAAGGTC 59.306 50.000 0.00 0.00 0.00 3.85
1536 1596 0.402504 ATGCGGTGTTGAAGGGGTTA 59.597 50.000 0.00 0.00 0.00 2.85
1776 1836 3.950794 GAAGATGGACCGTGCGGCA 62.951 63.158 10.87 0.00 39.32 5.69
1803 1863 4.424842 ACTTGAGGGAGATGAGAGAGTTT 58.575 43.478 0.00 0.00 0.00 2.66
1870 1930 3.455469 GCAGGGCTGGGTCAATGC 61.455 66.667 0.00 0.00 0.00 3.56
1900 1960 3.894427 GCTGAGAGTTAGGGATGAGATGA 59.106 47.826 0.00 0.00 0.00 2.92
1980 2040 3.746045 AAAGAGCGTAGGTTGTCTGAA 57.254 42.857 0.00 0.00 39.88 3.02
2061 2121 7.039993 ACCTTCACAACTTTAATTCATGGGTAC 60.040 37.037 0.00 0.00 0.00 3.34
2105 2165 6.704310 AGAAGGCATTGCAACTATTTGAAAT 58.296 32.000 11.39 0.00 41.15 2.17
2115 2175 5.220340 GCAACTATTTGAAATGATGCTGCAC 60.220 40.000 3.57 0.00 34.24 4.57
2259 2319 3.523564 ACCACATTACCTACAGCATCCTT 59.476 43.478 0.00 0.00 0.00 3.36
2304 2364 3.167485 ACAAGTGGATGATGCATTTGGT 58.833 40.909 21.98 8.61 39.15 3.67
2332 2392 4.961730 TGGATGAAATGATAAACAAGGGGG 59.038 41.667 0.00 0.00 0.00 5.40
2555 2615 5.835280 AGAATGAAAAGGTTCAACCAGACAT 59.165 36.000 9.90 6.08 46.66 3.06
2709 2769 0.610232 ATGTTGCAGCTGGGAACTCC 60.610 55.000 17.12 0.00 46.85 3.85
2766 2826 3.011032 AGAAAGGGTTTGCTCCTGATGAT 59.989 43.478 0.00 0.00 34.34 2.45
2924 2985 7.822161 TGAAGGTGAGAATGAGAAATTTTGA 57.178 32.000 0.00 0.00 0.00 2.69
2930 2991 7.324616 GGTGAGAATGAGAAATTTTGAAGTTCG 59.675 37.037 0.00 0.00 40.19 3.95
2956 3017 7.264947 GCATTAAAATATTGGCTAGGTTGTGT 58.735 34.615 0.00 0.00 0.00 3.72
2965 3026 1.568612 CTAGGTTGTGTGCACTGCCG 61.569 60.000 19.41 0.13 33.43 5.69
3002 3063 7.223582 CCGTAGTGGAATCAGCAATGATATATC 59.776 40.741 5.73 5.73 42.00 1.63
3003 3064 7.761249 CGTAGTGGAATCAGCAATGATATATCA 59.239 37.037 17.56 17.56 41.70 2.15
3004 3065 9.440773 GTAGTGGAATCAGCAATGATATATCAA 57.559 33.333 19.03 2.36 40.69 2.57
3123 3187 7.333528 TGCTTGACTGACATTCTTTTACTTT 57.666 32.000 0.00 0.00 0.00 2.66
3138 3288 9.897744 TTCTTTTACTTTTGCATTCTATCACTG 57.102 29.630 0.00 0.00 0.00 3.66
3139 3289 8.023128 TCTTTTACTTTTGCATTCTATCACTGC 58.977 33.333 0.00 0.00 36.45 4.40
3302 3453 5.809001 TCTAGATGTGCTTTCTTCACCAAT 58.191 37.500 0.00 0.00 33.71 3.16
3332 3490 5.975988 AATATTCTGTTAGGGCTCAGGAA 57.024 39.130 0.00 0.00 33.13 3.36
3340 3498 1.673665 GGGCTCAGGAAGTGTGCTG 60.674 63.158 0.00 0.00 43.83 4.41
3352 3510 1.750778 AGTGTGCTGTTGTTTTCTGGG 59.249 47.619 0.00 0.00 0.00 4.45
3387 3548 4.639310 AGCATGCTCTAAATTTCTCAGGTG 59.361 41.667 16.30 0.00 0.00 4.00
3460 3621 6.233430 GCACTAATGCCTGATATACAACTG 57.767 41.667 0.00 0.00 46.97 3.16
3507 3668 3.486383 ACATATTGCCAGGTTATTCCCG 58.514 45.455 0.00 0.00 36.75 5.14
3621 3824 1.602311 ACAGGCAGCACTTCTTTCTG 58.398 50.000 0.00 0.00 0.00 3.02
3636 3839 3.873361 TCTTTCTGAGCAGTCACAACTTG 59.127 43.478 0.00 0.00 31.71 3.16
3638 3841 3.758755 TCTGAGCAGTCACAACTTGAT 57.241 42.857 0.00 0.00 36.32 2.57
3732 3940 2.687425 TGCTGCTGAGTAAAACTGCAAA 59.313 40.909 0.00 0.00 40.46 3.68
3733 3941 3.045688 GCTGCTGAGTAAAACTGCAAAC 58.954 45.455 0.00 0.00 40.46 2.93
3734 3942 3.243201 GCTGCTGAGTAAAACTGCAAACT 60.243 43.478 0.00 0.00 40.46 2.66
3744 3952 9.647679 GAGTAAAACTGCAAACTACTACTTTTC 57.352 33.333 0.00 0.00 0.00 2.29
3821 4029 1.135689 CGCGAAACTGATCAAAAGGGG 60.136 52.381 0.00 0.00 0.00 4.79
3827 4035 4.731313 AACTGATCAAAAGGGGAGAACT 57.269 40.909 0.00 0.00 0.00 3.01
3832 4040 1.774254 TCAAAAGGGGAGAACTGAGCA 59.226 47.619 0.00 0.00 0.00 4.26
3918 4126 9.413048 GCTGTATATATGAGAAACTTACACTCC 57.587 37.037 0.00 0.00 0.00 3.85
3920 4128 9.429109 TGTATATATGAGAAACTTACACTCCCA 57.571 33.333 0.00 0.00 0.00 4.37
3939 4149 2.161855 CACTTTACTGCAGGGCAATCA 58.838 47.619 19.93 0.00 38.41 2.57
3958 4168 6.481644 GCAATCAAAATTGGTGTACAAAGGAA 59.518 34.615 0.00 0.00 43.46 3.36
3964 4174 9.108284 CAAAATTGGTGTACAAAGGAAGAAATT 57.892 29.630 0.00 0.00 43.46 1.82
4008 4218 1.379977 GCCCCTTCAAGCCTTACCC 60.380 63.158 0.00 0.00 0.00 3.69
4030 4240 4.040829 CCCCAAAAGAGCAAGGAAAAGAAT 59.959 41.667 0.00 0.00 0.00 2.40
4036 4246 6.966534 AAGAGCAAGGAAAAGAATGAAAGA 57.033 33.333 0.00 0.00 0.00 2.52
4037 4247 6.572167 AGAGCAAGGAAAAGAATGAAAGAG 57.428 37.500 0.00 0.00 0.00 2.85
4063 4273 4.074970 CAGAGGTTATGAGCACAAGGTTT 58.925 43.478 0.00 0.00 0.00 3.27
4065 4275 5.705441 CAGAGGTTATGAGCACAAGGTTTTA 59.295 40.000 0.00 0.00 0.00 1.52
4066 4276 6.375455 CAGAGGTTATGAGCACAAGGTTTTAT 59.625 38.462 0.00 0.00 0.00 1.40
4067 4277 6.375455 AGAGGTTATGAGCACAAGGTTTTATG 59.625 38.462 0.00 0.00 0.00 1.90
4068 4278 5.102313 GGTTATGAGCACAAGGTTTTATGC 58.898 41.667 0.00 0.00 38.39 3.14
4095 4305 7.550551 CAGGCTTTGATGAAGTTATGAGAAGTA 59.449 37.037 0.00 0.00 37.69 2.24
4096 4306 7.768120 AGGCTTTGATGAAGTTATGAGAAGTAG 59.232 37.037 0.00 0.00 37.69 2.57
4109 4319 2.492484 GAGAAGTAGGTTTCTCTGCCGA 59.508 50.000 8.17 0.00 46.12 5.54
4122 4332 4.382320 GCCGAGGCCGTGGTTGTA 62.382 66.667 16.46 0.00 34.56 2.41
4123 4333 2.582436 CCGAGGCCGTGGTTGTAT 59.418 61.111 8.06 0.00 0.00 2.29
4124 4334 1.813753 CCGAGGCCGTGGTTGTATG 60.814 63.158 8.06 0.00 0.00 2.39
4126 4336 1.600107 GAGGCCGTGGTTGTATGGA 59.400 57.895 0.00 0.00 0.00 3.41
4128 4338 0.623723 AGGCCGTGGTTGTATGGATT 59.376 50.000 0.00 0.00 0.00 3.01
4129 4339 1.841277 AGGCCGTGGTTGTATGGATTA 59.159 47.619 0.00 0.00 0.00 1.75
4130 4340 1.944709 GGCCGTGGTTGTATGGATTAC 59.055 52.381 0.00 0.00 0.00 1.89
4131 4341 1.944709 GCCGTGGTTGTATGGATTACC 59.055 52.381 0.00 0.00 0.00 2.85
4132 4342 2.206750 CCGTGGTTGTATGGATTACCG 58.793 52.381 0.00 0.00 39.42 4.02
4166 4402 5.049167 TGCACTTTGGACACAAATCATTTC 58.951 37.500 0.00 0.00 44.91 2.17
4179 5828 5.416952 ACAAATCATTTCTCTCCACCATCAC 59.583 40.000 0.00 0.00 0.00 3.06
4182 5831 4.984295 TCATTTCTCTCCACCATCACAAA 58.016 39.130 0.00 0.00 0.00 2.83
4185 5834 4.437682 TTCTCTCCACCATCACAAAAGT 57.562 40.909 0.00 0.00 0.00 2.66
4186 5835 3.743521 TCTCTCCACCATCACAAAAGTG 58.256 45.455 0.00 0.00 0.00 3.16
4188 5837 4.136796 CTCTCCACCATCACAAAAGTGAA 58.863 43.478 2.13 0.00 36.88 3.18
4204 5853 2.370189 AGTGAAAGAGGTGTGAAGAGGG 59.630 50.000 0.00 0.00 0.00 4.30
4210 5859 4.000928 AGAGGTGTGAAGAGGGATACAT 57.999 45.455 0.00 0.00 39.74 2.29
4219 5868 2.780714 AGAGGGATACATACGGACGAG 58.219 52.381 0.00 0.00 39.74 4.18
4295 5974 6.169557 TGTCTTAGGCAGAGTTTACAAAGA 57.830 37.500 0.00 0.00 29.34 2.52
4309 5988 3.795623 ACAAAGATCCTTGCATGATGC 57.204 42.857 11.12 11.12 45.29 3.91
4333 6012 7.280876 TGCATTTGCCAAGTTTGTATTTGTAAA 59.719 29.630 0.00 0.00 41.18 2.01
4334 6013 8.125448 GCATTTGCCAAGTTTGTATTTGTAAAA 58.875 29.630 0.00 0.00 34.31 1.52
4337 6016 9.994432 TTTGCCAAGTTTGTATTTGTAAAATTG 57.006 25.926 0.00 0.00 0.00 2.32
4338 6017 8.723942 TGCCAAGTTTGTATTTGTAAAATTGT 57.276 26.923 0.00 0.00 0.00 2.71
4339 6018 9.167311 TGCCAAGTTTGTATTTGTAAAATTGTT 57.833 25.926 0.00 0.00 0.00 2.83
4340 6019 9.432077 GCCAAGTTTGTATTTGTAAAATTGTTG 57.568 29.630 0.00 0.00 0.00 3.33
4352 6031 7.938563 TGTAAAATTGTTGTATGTCCAAAGC 57.061 32.000 0.00 0.00 0.00 3.51
4353 6032 7.492524 TGTAAAATTGTTGTATGTCCAAAGCA 58.507 30.769 0.00 0.00 0.00 3.91
4354 6033 7.651304 TGTAAAATTGTTGTATGTCCAAAGCAG 59.349 33.333 0.00 0.00 0.00 4.24
4355 6034 3.641437 TTGTTGTATGTCCAAAGCAGC 57.359 42.857 0.00 0.00 0.00 5.25
4356 6035 2.580962 TGTTGTATGTCCAAAGCAGCA 58.419 42.857 0.00 0.00 0.00 4.41
4357 6036 2.553602 TGTTGTATGTCCAAAGCAGCAG 59.446 45.455 0.00 0.00 0.00 4.24
4358 6037 1.167851 TGTATGTCCAAAGCAGCAGC 58.832 50.000 0.00 0.00 42.56 5.25
4359 6038 1.167851 GTATGTCCAAAGCAGCAGCA 58.832 50.000 3.17 0.00 45.49 4.41
4360 6039 1.131883 GTATGTCCAAAGCAGCAGCAG 59.868 52.381 3.17 0.00 45.49 4.24
4361 6040 1.248785 ATGTCCAAAGCAGCAGCAGG 61.249 55.000 3.17 2.25 45.49 4.85
4362 6041 2.987547 TCCAAAGCAGCAGCAGGC 60.988 61.111 3.17 0.00 45.49 4.85
4378 6057 3.645286 GCTTCGTGCCGTTACCAA 58.355 55.556 0.00 0.00 35.15 3.67
4379 6058 1.495951 GCTTCGTGCCGTTACCAAG 59.504 57.895 0.00 0.00 35.15 3.61
4380 6059 1.908066 GCTTCGTGCCGTTACCAAGG 61.908 60.000 0.00 0.00 35.15 3.61
4381 6060 0.601841 CTTCGTGCCGTTACCAAGGT 60.602 55.000 0.00 0.00 0.00 3.50
4382 6061 0.179051 TTCGTGCCGTTACCAAGGTT 60.179 50.000 0.00 0.00 0.00 3.50
4383 6062 0.600782 TCGTGCCGTTACCAAGGTTC 60.601 55.000 0.00 0.00 0.00 3.62
4384 6063 1.864176 GTGCCGTTACCAAGGTTCG 59.136 57.895 0.00 3.46 0.00 3.95
4385 6064 1.301874 TGCCGTTACCAAGGTTCGG 60.302 57.895 22.22 22.22 42.50 4.30
4386 6065 1.301953 GCCGTTACCAAGGTTCGGT 60.302 57.895 24.89 5.33 42.04 4.69
4387 6066 1.571215 GCCGTTACCAAGGTTCGGTG 61.571 60.000 24.89 10.59 42.04 4.94
4388 6067 0.033781 CCGTTACCAAGGTTCGGTGA 59.966 55.000 19.87 0.00 38.52 4.02
4389 6068 1.540797 CCGTTACCAAGGTTCGGTGAA 60.541 52.381 19.87 0.00 38.52 3.18
4390 6069 2.419667 CGTTACCAAGGTTCGGTGAAT 58.580 47.619 0.00 0.00 37.33 2.57
4391 6070 2.158841 CGTTACCAAGGTTCGGTGAATG 59.841 50.000 0.00 0.00 37.33 2.67
4392 6071 2.483014 TACCAAGGTTCGGTGAATGG 57.517 50.000 0.00 0.00 37.33 3.16
4393 6072 0.768622 ACCAAGGTTCGGTGAATGGA 59.231 50.000 5.03 0.00 34.69 3.41
4394 6073 1.354368 ACCAAGGTTCGGTGAATGGAT 59.646 47.619 5.03 0.00 34.69 3.41
4395 6074 1.745087 CCAAGGTTCGGTGAATGGATG 59.255 52.381 0.00 0.00 0.00 3.51
4396 6075 2.436417 CAAGGTTCGGTGAATGGATGT 58.564 47.619 0.00 0.00 0.00 3.06
4397 6076 2.403252 AGGTTCGGTGAATGGATGTC 57.597 50.000 0.00 0.00 0.00 3.06
4398 6077 1.628340 AGGTTCGGTGAATGGATGTCA 59.372 47.619 0.00 0.00 0.00 3.58
4399 6078 2.039746 AGGTTCGGTGAATGGATGTCAA 59.960 45.455 0.00 0.00 0.00 3.18
4400 6079 2.817258 GGTTCGGTGAATGGATGTCAAA 59.183 45.455 0.00 0.00 0.00 2.69
4401 6080 3.443681 GGTTCGGTGAATGGATGTCAAAT 59.556 43.478 0.00 0.00 0.00 2.32
4402 6081 4.638421 GGTTCGGTGAATGGATGTCAAATA 59.362 41.667 0.00 0.00 0.00 1.40
4403 6082 5.299279 GGTTCGGTGAATGGATGTCAAATAT 59.701 40.000 0.00 0.00 0.00 1.28
4404 6083 6.430451 GTTCGGTGAATGGATGTCAAATATC 58.570 40.000 0.00 0.00 0.00 1.63
4405 6084 5.928976 TCGGTGAATGGATGTCAAATATCT 58.071 37.500 0.00 0.00 0.00 1.98
4406 6085 6.356556 TCGGTGAATGGATGTCAAATATCTT 58.643 36.000 0.00 0.00 0.00 2.40
4407 6086 6.828273 TCGGTGAATGGATGTCAAATATCTTT 59.172 34.615 0.00 0.00 0.00 2.52
4408 6087 7.339212 TCGGTGAATGGATGTCAAATATCTTTT 59.661 33.333 0.00 0.00 0.00 2.27
4409 6088 7.433131 CGGTGAATGGATGTCAAATATCTTTTG 59.567 37.037 0.00 0.00 0.00 2.44
4410 6089 8.469200 GGTGAATGGATGTCAAATATCTTTTGA 58.531 33.333 0.00 0.00 36.21 2.69
4411 6090 9.859427 GTGAATGGATGTCAAATATCTTTTGAA 57.141 29.630 2.58 0.00 39.76 2.69
4412 6091 9.859427 TGAATGGATGTCAAATATCTTTTGAAC 57.141 29.630 2.58 0.00 39.76 3.18
4415 6094 9.865321 ATGGATGTCAAATATCTTTTGAACTTG 57.135 29.630 2.58 0.00 39.76 3.16
4416 6095 8.859090 TGGATGTCAAATATCTTTTGAACTTGT 58.141 29.630 2.58 0.00 39.76 3.16
4417 6096 9.696917 GGATGTCAAATATCTTTTGAACTTGTT 57.303 29.630 2.58 0.00 39.76 2.83
4419 6098 8.351495 TGTCAAATATCTTTTGAACTTGTTGC 57.649 30.769 2.58 0.00 39.76 4.17
4420 6099 7.978414 TGTCAAATATCTTTTGAACTTGTTGCA 59.022 29.630 2.58 0.00 39.76 4.08
4421 6100 8.816144 GTCAAATATCTTTTGAACTTGTTGCAA 58.184 29.630 0.00 0.00 39.76 4.08
4422 6101 9.376075 TCAAATATCTTTTGAACTTGTTGCAAA 57.624 25.926 0.00 0.00 35.69 3.68
4423 6102 9.985318 CAAATATCTTTTGAACTTGTTGCAAAA 57.015 25.926 0.00 0.00 38.68 2.44
4426 6105 5.280328 CTTTTGAACTTGTTGCAAAAGCA 57.720 34.783 22.20 3.29 46.24 3.91
4427 6106 5.871539 CTTTTGAACTTGTTGCAAAAGCAT 58.128 33.333 22.20 9.25 46.24 3.79
4428 6107 5.467902 TTTGAACTTGTTGCAAAAGCATC 57.532 34.783 16.38 15.12 0.00 3.91
4429 6108 4.120792 TGAACTTGTTGCAAAAGCATCA 57.879 36.364 16.38 16.68 0.00 3.07
4430 6109 4.695396 TGAACTTGTTGCAAAAGCATCAT 58.305 34.783 16.38 4.02 0.00 2.45
4431 6110 4.746115 TGAACTTGTTGCAAAAGCATCATC 59.254 37.500 16.38 10.32 0.00 2.92
4432 6111 4.325028 ACTTGTTGCAAAAGCATCATCA 57.675 36.364 16.38 0.11 0.00 3.07
4433 6112 4.304110 ACTTGTTGCAAAAGCATCATCAG 58.696 39.130 16.38 1.41 0.00 2.90
4434 6113 4.038282 ACTTGTTGCAAAAGCATCATCAGA 59.962 37.500 16.38 0.00 0.00 3.27
4435 6114 4.587584 TGTTGCAAAAGCATCATCAGAA 57.412 36.364 0.00 0.00 0.00 3.02
4436 6115 4.552355 TGTTGCAAAAGCATCATCAGAAG 58.448 39.130 0.00 0.00 0.00 2.85
4437 6116 3.226346 TGCAAAAGCATCATCAGAAGC 57.774 42.857 0.00 0.00 38.70 3.86
4438 6117 2.559231 TGCAAAAGCATCATCAGAAGCA 59.441 40.909 0.00 0.00 40.78 3.91
4439 6118 3.194755 TGCAAAAGCATCATCAGAAGCAT 59.805 39.130 0.00 0.00 40.78 3.79
4440 6119 4.399934 TGCAAAAGCATCATCAGAAGCATA 59.600 37.500 0.00 0.00 40.78 3.14
4441 6120 4.976731 GCAAAAGCATCATCAGAAGCATAG 59.023 41.667 0.00 0.00 40.78 2.23
4442 6121 4.832590 AAAGCATCATCAGAAGCATAGC 57.167 40.909 0.00 0.00 40.78 2.97
4443 6122 3.487120 AGCATCATCAGAAGCATAGCA 57.513 42.857 0.00 0.00 40.78 3.49
4444 6123 3.816994 AGCATCATCAGAAGCATAGCAA 58.183 40.909 0.00 0.00 40.78 3.91
4445 6124 4.204799 AGCATCATCAGAAGCATAGCAAA 58.795 39.130 0.00 0.00 40.78 3.68
4446 6125 4.643334 AGCATCATCAGAAGCATAGCAAAA 59.357 37.500 0.00 0.00 40.78 2.44
4447 6126 5.302059 AGCATCATCAGAAGCATAGCAAAAT 59.698 36.000 0.00 0.00 40.78 1.82
4448 6127 5.402568 GCATCATCAGAAGCATAGCAAAATG 59.597 40.000 0.00 0.00 38.31 2.32
4462 6141 4.184079 GCAAAATGCTCTTCTGGAATGT 57.816 40.909 0.00 0.00 40.96 2.71
4463 6142 5.314923 GCAAAATGCTCTTCTGGAATGTA 57.685 39.130 0.00 0.00 40.96 2.29
4464 6143 5.899299 GCAAAATGCTCTTCTGGAATGTAT 58.101 37.500 0.00 0.00 40.96 2.29
4465 6144 5.747197 GCAAAATGCTCTTCTGGAATGTATG 59.253 40.000 0.00 0.00 40.96 2.39
4466 6145 5.511234 AAATGCTCTTCTGGAATGTATGC 57.489 39.130 0.00 0.00 0.00 3.14
4467 6146 2.923121 TGCTCTTCTGGAATGTATGCC 58.077 47.619 0.00 0.00 0.00 4.40
4468 6147 2.507058 TGCTCTTCTGGAATGTATGCCT 59.493 45.455 0.00 0.00 0.00 4.75
4469 6148 3.137533 GCTCTTCTGGAATGTATGCCTC 58.862 50.000 0.00 0.00 0.00 4.70
4470 6149 3.181456 GCTCTTCTGGAATGTATGCCTCT 60.181 47.826 0.00 0.00 0.00 3.69
4471 6150 4.378774 CTCTTCTGGAATGTATGCCTCTG 58.621 47.826 0.00 0.00 0.00 3.35
4472 6151 4.033009 TCTTCTGGAATGTATGCCTCTGA 58.967 43.478 0.00 0.00 0.00 3.27
4473 6152 4.471025 TCTTCTGGAATGTATGCCTCTGAA 59.529 41.667 0.00 0.00 0.00 3.02
4474 6153 4.842531 TCTGGAATGTATGCCTCTGAAA 57.157 40.909 0.00 0.00 0.00 2.69
4475 6154 5.178096 TCTGGAATGTATGCCTCTGAAAA 57.822 39.130 0.00 0.00 0.00 2.29
4476 6155 5.188434 TCTGGAATGTATGCCTCTGAAAAG 58.812 41.667 0.00 0.00 0.00 2.27
4477 6156 4.922206 TGGAATGTATGCCTCTGAAAAGT 58.078 39.130 0.00 0.00 0.00 2.66
4478 6157 4.943705 TGGAATGTATGCCTCTGAAAAGTC 59.056 41.667 0.00 0.00 0.00 3.01
4479 6158 4.943705 GGAATGTATGCCTCTGAAAAGTCA 59.056 41.667 0.00 0.00 0.00 3.41
4480 6159 5.415701 GGAATGTATGCCTCTGAAAAGTCAA 59.584 40.000 0.00 0.00 31.88 3.18
4481 6160 6.071952 GGAATGTATGCCTCTGAAAAGTCAAA 60.072 38.462 0.00 0.00 31.88 2.69
4482 6161 6.899393 ATGTATGCCTCTGAAAAGTCAAAA 57.101 33.333 0.00 0.00 31.88 2.44
4483 6162 6.707440 TGTATGCCTCTGAAAAGTCAAAAA 57.293 33.333 0.00 0.00 31.88 1.94
4502 6181 5.590530 AAAAACACACTTCTGGCAATACA 57.409 34.783 0.00 0.00 0.00 2.29
4503 6182 5.789643 AAAACACACTTCTGGCAATACAT 57.210 34.783 0.00 0.00 0.00 2.29
4504 6183 6.892658 AAAACACACTTCTGGCAATACATA 57.107 33.333 0.00 0.00 0.00 2.29
4505 6184 6.892658 AAACACACTTCTGGCAATACATAA 57.107 33.333 0.00 0.00 0.00 1.90
4506 6185 7.466746 AAACACACTTCTGGCAATACATAAT 57.533 32.000 0.00 0.00 0.00 1.28
4507 6186 6.441093 ACACACTTCTGGCAATACATAATG 57.559 37.500 0.00 0.00 0.00 1.90
4508 6187 6.179756 ACACACTTCTGGCAATACATAATGA 58.820 36.000 0.00 0.00 0.00 2.57
4509 6188 6.658816 ACACACTTCTGGCAATACATAATGAA 59.341 34.615 0.00 0.00 0.00 2.57
4510 6189 7.176515 ACACACTTCTGGCAATACATAATGAAA 59.823 33.333 0.00 0.00 0.00 2.69
4511 6190 8.192774 CACACTTCTGGCAATACATAATGAAAT 58.807 33.333 0.00 0.00 0.00 2.17
4512 6191 9.407380 ACACTTCTGGCAATACATAATGAAATA 57.593 29.630 0.00 0.00 0.00 1.40
4513 6192 9.888878 CACTTCTGGCAATACATAATGAAATAG 57.111 33.333 0.00 0.00 0.00 1.73
4514 6193 9.851686 ACTTCTGGCAATACATAATGAAATAGA 57.148 29.630 0.00 0.00 0.00 1.98
4517 6196 9.716531 TCTGGCAATACATAATGAAATAGAGAG 57.283 33.333 0.00 0.00 0.00 3.20
4518 6197 9.716531 CTGGCAATACATAATGAAATAGAGAGA 57.283 33.333 0.00 0.00 0.00 3.10
4525 6204 8.954950 ACATAATGAAATAGAGAGAACACTGG 57.045 34.615 0.00 0.00 0.00 4.00
4526 6205 8.543774 ACATAATGAAATAGAGAGAACACTGGT 58.456 33.333 0.00 0.00 0.00 4.00
4527 6206 9.388506 CATAATGAAATAGAGAGAACACTGGTT 57.611 33.333 0.00 0.00 40.76 3.67
4528 6207 9.965902 ATAATGAAATAGAGAGAACACTGGTTT 57.034 29.630 0.00 0.00 37.36 3.27
4529 6208 8.697507 AATGAAATAGAGAGAACACTGGTTTT 57.302 30.769 0.00 0.00 37.36 2.43
4530 6209 9.793259 AATGAAATAGAGAGAACACTGGTTTTA 57.207 29.630 0.00 0.00 37.36 1.52
4531 6210 9.965902 ATGAAATAGAGAGAACACTGGTTTTAT 57.034 29.630 0.00 0.00 37.36 1.40
4534 6213 9.892130 AAATAGAGAGAACACTGGTTTTATAGG 57.108 33.333 0.00 0.00 37.36 2.57
4535 6214 6.301169 AGAGAGAACACTGGTTTTATAGGG 57.699 41.667 0.00 0.00 37.36 3.53
4536 6215 4.844884 AGAGAACACTGGTTTTATAGGGC 58.155 43.478 0.00 0.00 37.36 5.19
4537 6216 4.288626 AGAGAACACTGGTTTTATAGGGCA 59.711 41.667 0.00 0.00 37.36 5.36
4538 6217 4.993028 AGAACACTGGTTTTATAGGGCAA 58.007 39.130 0.00 0.00 37.36 4.52
4539 6218 5.390387 AGAACACTGGTTTTATAGGGCAAA 58.610 37.500 0.00 0.00 37.36 3.68
4540 6219 6.016555 AGAACACTGGTTTTATAGGGCAAAT 58.983 36.000 0.00 0.00 37.36 2.32
4541 6220 7.179269 AGAACACTGGTTTTATAGGGCAAATA 58.821 34.615 0.00 0.00 37.36 1.40
4542 6221 7.672239 AGAACACTGGTTTTATAGGGCAAATAA 59.328 33.333 0.00 0.00 37.36 1.40
4543 6222 7.784470 ACACTGGTTTTATAGGGCAAATAAA 57.216 32.000 0.00 0.83 0.00 1.40
4544 6223 8.196378 ACACTGGTTTTATAGGGCAAATAAAA 57.804 30.769 10.45 10.45 36.77 1.52
4545 6224 8.821817 ACACTGGTTTTATAGGGCAAATAAAAT 58.178 29.630 15.10 2.47 39.61 1.82
4546 6225 9.313118 CACTGGTTTTATAGGGCAAATAAAATC 57.687 33.333 15.10 14.98 39.61 2.17
4547 6226 9.267071 ACTGGTTTTATAGGGCAAATAAAATCT 57.733 29.630 19.18 5.94 39.24 2.40
4548 6227 9.750125 CTGGTTTTATAGGGCAAATAAAATCTC 57.250 33.333 19.18 12.77 39.24 2.75
4549 6228 9.261035 TGGTTTTATAGGGCAAATAAAATCTCA 57.739 29.630 19.18 14.23 39.24 3.27
4550 6229 9.750125 GGTTTTATAGGGCAAATAAAATCTCAG 57.250 33.333 15.10 0.00 39.61 3.35
4551 6230 9.750125 GTTTTATAGGGCAAATAAAATCTCAGG 57.250 33.333 15.10 0.00 39.61 3.86
4552 6231 9.487442 TTTTATAGGGCAAATAAAATCTCAGGT 57.513 29.630 10.45 0.00 35.11 4.00
4553 6232 9.487442 TTTATAGGGCAAATAAAATCTCAGGTT 57.513 29.630 2.17 0.00 0.00 3.50
4554 6233 5.665916 AGGGCAAATAAAATCTCAGGTTG 57.334 39.130 0.00 0.00 0.00 3.77
4555 6234 5.332743 AGGGCAAATAAAATCTCAGGTTGA 58.667 37.500 0.00 0.00 0.00 3.18
4556 6235 5.960202 AGGGCAAATAAAATCTCAGGTTGAT 59.040 36.000 0.00 0.00 0.00 2.57
4557 6236 6.441604 AGGGCAAATAAAATCTCAGGTTGATT 59.558 34.615 0.00 0.00 35.88 2.57
4558 6237 6.536224 GGGCAAATAAAATCTCAGGTTGATTG 59.464 38.462 0.00 0.00 34.74 2.67
4559 6238 6.036408 GGCAAATAAAATCTCAGGTTGATTGC 59.964 38.462 0.00 0.00 34.74 3.56
4560 6239 6.591062 GCAAATAAAATCTCAGGTTGATTGCA 59.409 34.615 0.00 0.00 34.74 4.08
4561 6240 7.118101 GCAAATAAAATCTCAGGTTGATTGCAA 59.882 33.333 0.00 0.00 34.74 4.08
4562 6241 9.158233 CAAATAAAATCTCAGGTTGATTGCAAT 57.842 29.630 12.83 12.83 36.22 3.56
4563 6242 9.729281 AAATAAAATCTCAGGTTGATTGCAATT 57.271 25.926 14.33 0.00 36.22 2.32
4564 6243 8.937634 ATAAAATCTCAGGTTGATTGCAATTC 57.062 30.769 14.33 7.58 36.22 2.17
4565 6244 5.988310 AATCTCAGGTTGATTGCAATTCA 57.012 34.783 14.33 10.12 36.22 2.57
4566 6245 5.578005 ATCTCAGGTTGATTGCAATTCAG 57.422 39.130 14.33 0.00 36.22 3.02
4567 6246 4.654915 TCTCAGGTTGATTGCAATTCAGA 58.345 39.130 14.33 0.00 36.22 3.27
4568 6247 5.072055 TCTCAGGTTGATTGCAATTCAGAA 58.928 37.500 14.33 1.97 36.22 3.02
4569 6248 5.535783 TCTCAGGTTGATTGCAATTCAGAAA 59.464 36.000 14.33 1.29 36.22 2.52
4570 6249 6.040729 TCTCAGGTTGATTGCAATTCAGAAAA 59.959 34.615 14.33 0.00 36.22 2.29
4571 6250 5.984926 TCAGGTTGATTGCAATTCAGAAAAC 59.015 36.000 14.33 10.85 36.22 2.43
4572 6251 5.754406 CAGGTTGATTGCAATTCAGAAAACA 59.246 36.000 14.33 1.03 36.22 2.83
4573 6252 6.258287 CAGGTTGATTGCAATTCAGAAAACAA 59.742 34.615 14.33 7.55 36.22 2.83
4574 6253 6.822676 AGGTTGATTGCAATTCAGAAAACAAA 59.177 30.769 14.33 0.00 36.22 2.83
4575 6254 7.011669 AGGTTGATTGCAATTCAGAAAACAAAG 59.988 33.333 14.33 0.00 36.22 2.77
4576 6255 7.201635 GGTTGATTGCAATTCAGAAAACAAAGT 60.202 33.333 14.33 0.00 36.22 2.66
4577 6256 7.846644 TGATTGCAATTCAGAAAACAAAGTT 57.153 28.000 14.33 0.00 0.00 2.66
4578 6257 7.908230 TGATTGCAATTCAGAAAACAAAGTTC 58.092 30.769 14.33 0.00 0.00 3.01
4579 6258 5.947503 TGCAATTCAGAAAACAAAGTTCG 57.052 34.783 0.00 0.00 0.00 3.95
4580 6259 4.803088 TGCAATTCAGAAAACAAAGTTCGG 59.197 37.500 0.00 0.00 0.00 4.30
4581 6260 5.040635 GCAATTCAGAAAACAAAGTTCGGA 58.959 37.500 0.00 0.00 0.00 4.55
4582 6261 5.691754 GCAATTCAGAAAACAAAGTTCGGAT 59.308 36.000 0.00 0.00 30.85 4.18
4583 6262 6.200854 GCAATTCAGAAAACAAAGTTCGGATT 59.799 34.615 0.00 0.00 30.85 3.01
4584 6263 7.558137 CAATTCAGAAAACAAAGTTCGGATTG 58.442 34.615 0.00 0.00 30.85 2.67
4585 6264 6.443934 TTCAGAAAACAAAGTTCGGATTGA 57.556 33.333 0.00 0.00 30.85 2.57
4586 6265 6.633500 TCAGAAAACAAAGTTCGGATTGAT 57.367 33.333 0.00 0.00 0.00 2.57
4587 6266 7.038154 TCAGAAAACAAAGTTCGGATTGATT 57.962 32.000 0.00 0.00 0.00 2.57
4588 6267 6.917477 TCAGAAAACAAAGTTCGGATTGATTG 59.083 34.615 0.00 0.00 0.00 2.67
4589 6268 5.691754 AGAAAACAAAGTTCGGATTGATTGC 59.308 36.000 0.00 0.00 0.00 3.56
4590 6269 3.201726 ACAAAGTTCGGATTGATTGCG 57.798 42.857 0.00 0.00 41.07 4.85
4591 6270 1.913403 CAAAGTTCGGATTGATTGCGC 59.087 47.619 0.00 0.00 39.30 6.09
4592 6271 0.096976 AAGTTCGGATTGATTGCGCG 59.903 50.000 0.00 0.00 39.30 6.86
4593 6272 1.297598 GTTCGGATTGATTGCGCGG 60.298 57.895 8.83 0.00 39.30 6.46
4594 6273 1.743623 TTCGGATTGATTGCGCGGT 60.744 52.632 8.83 0.00 39.30 5.68
4595 6274 1.976478 TTCGGATTGATTGCGCGGTG 61.976 55.000 8.83 0.00 39.30 4.94
4596 6275 2.278142 GGATTGATTGCGCGGTGC 60.278 61.111 8.83 6.58 46.70 5.01
4607 6286 4.434876 GCGGTGCGTTCTTTTAGC 57.565 55.556 0.00 0.00 0.00 3.09
4608 6287 1.572447 GCGGTGCGTTCTTTTAGCA 59.428 52.632 0.00 0.00 38.71 3.49
4618 6297 5.401956 CGTTCTTTTAGCACGCAAAATAC 57.598 39.130 0.00 0.00 26.95 1.89
4619 6298 4.319901 CGTTCTTTTAGCACGCAAAATACC 59.680 41.667 0.00 0.00 26.95 2.73
4620 6299 4.073169 TCTTTTAGCACGCAAAATACCG 57.927 40.909 0.00 0.00 0.00 4.02
4621 6300 3.747010 TCTTTTAGCACGCAAAATACCGA 59.253 39.130 0.00 0.00 0.00 4.69
4622 6301 3.458779 TTTAGCACGCAAAATACCGAC 57.541 42.857 0.00 0.00 0.00 4.79
4623 6302 2.373540 TAGCACGCAAAATACCGACT 57.626 45.000 0.00 0.00 0.00 4.18
4624 6303 0.796312 AGCACGCAAAATACCGACTG 59.204 50.000 0.00 0.00 0.00 3.51
4625 6304 0.179200 GCACGCAAAATACCGACTGG 60.179 55.000 0.00 0.00 42.84 4.00
4626 6305 0.446222 CACGCAAAATACCGACTGGG 59.554 55.000 0.00 0.00 40.75 4.45
4627 6306 1.303091 ACGCAAAATACCGACTGGGC 61.303 55.000 0.00 0.00 40.62 5.36
4628 6307 1.807226 GCAAAATACCGACTGGGCC 59.193 57.895 0.00 0.00 40.62 5.80
4629 6308 0.963355 GCAAAATACCGACTGGGCCA 60.963 55.000 5.85 5.85 40.62 5.36
4630 6309 1.540267 CAAAATACCGACTGGGCCAA 58.460 50.000 8.04 0.00 40.62 4.52
4631 6310 1.889829 CAAAATACCGACTGGGCCAAA 59.110 47.619 8.04 0.00 40.62 3.28
4632 6311 2.495669 CAAAATACCGACTGGGCCAAAT 59.504 45.455 8.04 0.00 40.62 2.32
4633 6312 1.762708 AATACCGACTGGGCCAAATG 58.237 50.000 8.04 0.00 40.62 2.32
4634 6313 0.916086 ATACCGACTGGGCCAAATGA 59.084 50.000 8.04 0.00 40.62 2.57
4635 6314 0.693622 TACCGACTGGGCCAAATGAA 59.306 50.000 8.04 0.00 40.62 2.57
4636 6315 0.178975 ACCGACTGGGCCAAATGAAA 60.179 50.000 8.04 0.00 40.62 2.69
4637 6316 0.965439 CCGACTGGGCCAAATGAAAA 59.035 50.000 8.04 0.00 0.00 2.29
4638 6317 1.336795 CCGACTGGGCCAAATGAAAAC 60.337 52.381 8.04 0.00 0.00 2.43
4639 6318 1.336795 CGACTGGGCCAAATGAAAACC 60.337 52.381 8.04 0.00 0.00 3.27
4640 6319 1.001974 GACTGGGCCAAATGAAAACCC 59.998 52.381 8.04 0.00 41.24 4.11
4641 6320 0.324614 CTGGGCCAAATGAAAACCCC 59.675 55.000 8.04 0.00 40.04 4.95
4642 6321 0.400525 TGGGCCAAATGAAAACCCCA 60.401 50.000 2.13 0.00 40.04 4.96
4643 6322 0.991146 GGGCCAAATGAAAACCCCAT 59.009 50.000 4.39 0.00 34.23 4.00
4644 6323 2.192263 GGGCCAAATGAAAACCCCATA 58.808 47.619 4.39 0.00 34.23 2.74
4645 6324 2.170397 GGGCCAAATGAAAACCCCATAG 59.830 50.000 4.39 0.00 34.23 2.23
4646 6325 2.419990 GGCCAAATGAAAACCCCATAGC 60.420 50.000 0.00 0.00 0.00 2.97
4647 6326 2.738321 GCCAAATGAAAACCCCATAGCG 60.738 50.000 0.00 0.00 0.00 4.26
4648 6327 2.159114 CCAAATGAAAACCCCATAGCGG 60.159 50.000 0.00 0.00 0.00 5.52
4649 6328 2.495669 CAAATGAAAACCCCATAGCGGT 59.504 45.455 0.00 0.00 34.07 5.68
4650 6329 3.655615 AATGAAAACCCCATAGCGGTA 57.344 42.857 0.00 0.00 31.69 4.02
4651 6330 3.876309 ATGAAAACCCCATAGCGGTAT 57.124 42.857 0.16 0.16 31.69 2.73
4652 6331 4.986054 ATGAAAACCCCATAGCGGTATA 57.014 40.909 6.84 0.00 31.69 1.47
4653 6332 4.986054 TGAAAACCCCATAGCGGTATAT 57.014 40.909 6.84 0.00 31.69 0.86
4654 6333 5.313280 TGAAAACCCCATAGCGGTATATT 57.687 39.130 6.84 0.00 31.69 1.28
4655 6334 5.310451 TGAAAACCCCATAGCGGTATATTC 58.690 41.667 6.84 6.25 31.69 1.75
4656 6335 3.994931 AACCCCATAGCGGTATATTCC 57.005 47.619 6.84 0.00 31.69 3.01
4657 6336 2.910544 ACCCCATAGCGGTATATTCCA 58.089 47.619 6.84 0.00 0.00 3.53
4658 6337 3.460825 ACCCCATAGCGGTATATTCCAT 58.539 45.455 6.84 0.00 0.00 3.41
4659 6338 4.627015 ACCCCATAGCGGTATATTCCATA 58.373 43.478 6.84 0.00 0.00 2.74
4660 6339 4.654262 ACCCCATAGCGGTATATTCCATAG 59.346 45.833 6.84 0.00 0.00 2.23
4661 6340 4.040461 CCCCATAGCGGTATATTCCATAGG 59.960 50.000 6.84 1.80 0.00 2.57
4662 6341 4.503296 CCCATAGCGGTATATTCCATAGGC 60.503 50.000 6.84 0.00 0.00 3.93
4663 6342 4.503296 CCATAGCGGTATATTCCATAGGCC 60.503 50.000 6.84 0.00 0.00 5.19
4664 6343 1.838077 AGCGGTATATTCCATAGGCCC 59.162 52.381 0.00 0.00 0.00 5.80
4665 6344 1.838077 GCGGTATATTCCATAGGCCCT 59.162 52.381 0.00 0.00 0.00 5.19
4666 6345 2.420129 GCGGTATATTCCATAGGCCCTG 60.420 54.545 0.00 0.00 0.00 4.45
4667 6346 2.420129 CGGTATATTCCATAGGCCCTGC 60.420 54.545 0.00 0.00 0.00 4.85
4668 6347 2.576191 GGTATATTCCATAGGCCCTGCA 59.424 50.000 0.00 0.00 0.00 4.41
4669 6348 3.010138 GGTATATTCCATAGGCCCTGCAA 59.990 47.826 0.00 0.00 0.00 4.08
4670 6349 2.656947 TATTCCATAGGCCCTGCAAC 57.343 50.000 0.00 0.00 0.00 4.17
4671 6350 0.929244 ATTCCATAGGCCCTGCAACT 59.071 50.000 0.00 0.00 0.00 3.16
4672 6351 0.704076 TTCCATAGGCCCTGCAACTT 59.296 50.000 0.00 0.00 0.00 2.66
4673 6352 0.704076 TCCATAGGCCCTGCAACTTT 59.296 50.000 0.00 0.00 0.00 2.66
4674 6353 1.919654 TCCATAGGCCCTGCAACTTTA 59.080 47.619 0.00 0.00 0.00 1.85
4675 6354 2.024414 CCATAGGCCCTGCAACTTTAC 58.976 52.381 0.00 0.00 0.00 2.01
4676 6355 2.620367 CCATAGGCCCTGCAACTTTACA 60.620 50.000 0.00 0.00 0.00 2.41
4677 6356 2.489938 TAGGCCCTGCAACTTTACAG 57.510 50.000 0.00 0.00 0.00 2.74
4678 6357 0.895559 AGGCCCTGCAACTTTACAGC 60.896 55.000 0.00 0.00 32.37 4.40
4679 6358 1.586541 GCCCTGCAACTTTACAGCC 59.413 57.895 0.00 0.00 32.37 4.85
4680 6359 1.877576 GCCCTGCAACTTTACAGCCC 61.878 60.000 0.00 0.00 32.37 5.19
4681 6360 0.539438 CCCTGCAACTTTACAGCCCA 60.539 55.000 0.00 0.00 32.37 5.36
4682 6361 0.883833 CCTGCAACTTTACAGCCCAG 59.116 55.000 0.00 0.00 32.37 4.45
4683 6362 0.242017 CTGCAACTTTACAGCCCAGC 59.758 55.000 0.00 0.00 0.00 4.85
4684 6363 1.178534 TGCAACTTTACAGCCCAGCC 61.179 55.000 0.00 0.00 0.00 4.85
4685 6364 1.877576 GCAACTTTACAGCCCAGCCC 61.878 60.000 0.00 0.00 0.00 5.19
4686 6365 1.303317 AACTTTACAGCCCAGCCCG 60.303 57.895 0.00 0.00 0.00 6.13
4687 6366 3.134127 CTTTACAGCCCAGCCCGC 61.134 66.667 0.00 0.00 0.00 6.13
4688 6367 3.628646 CTTTACAGCCCAGCCCGCT 62.629 63.158 0.00 0.00 36.91 5.52
4689 6368 3.204467 TTTACAGCCCAGCCCGCTT 62.204 57.895 0.00 0.00 33.17 4.68
4711 6390 1.133869 CCGCTTAGAAAAACGCCCG 59.866 57.895 0.00 0.00 0.00 6.13
4712 6391 1.511254 CGCTTAGAAAAACGCCCGC 60.511 57.895 0.00 0.00 0.00 6.13
4717 6396 2.504163 TAGAAAAACGCCCGCCGCTA 62.504 55.000 0.00 0.00 41.76 4.26
4718 6397 2.968639 GAAAAACGCCCGCCGCTAA 61.969 57.895 0.00 0.00 41.76 3.09
4722 6401 4.963428 ACGCCCGCCGCTAATAGC 62.963 66.667 1.41 1.41 41.76 2.97
4723 6402 4.664677 CGCCCGCCGCTAATAGCT 62.665 66.667 10.80 0.00 39.60 3.32
4724 6403 2.738904 GCCCGCCGCTAATAGCTC 60.739 66.667 10.80 1.35 39.60 4.09
4725 6404 2.048127 CCCGCCGCTAATAGCTCC 60.048 66.667 10.80 0.18 39.60 4.70
4727 6406 1.664965 CCGCCGCTAATAGCTCCAC 60.665 63.158 10.80 0.00 39.60 4.02
4771 6455 2.630580 CCCCTCCGAACCAAAATTTTCA 59.369 45.455 0.00 0.00 0.00 2.69
5164 6856 4.814041 GCCCCTCCCTCTCTGCCT 62.814 72.222 0.00 0.00 0.00 4.75
5175 6867 4.704103 TCTGCCTCCCCTGCTCGT 62.704 66.667 0.00 0.00 0.00 4.18
5194 6886 1.134694 GCATTCCGCCGAACAGTTC 59.865 57.895 2.85 2.85 32.94 3.01
5228 6920 2.590575 CGGCTTGTGAACGGTGGT 60.591 61.111 0.00 0.00 0.00 4.16
5239 6931 0.037975 AACGGTGGTCTATCGCGTTT 60.038 50.000 5.77 0.00 0.00 3.60
5311 7003 2.668550 GCGTCTGTGGGGTTGGTC 60.669 66.667 0.00 0.00 0.00 4.02
5363 7056 1.064060 GGGAATTTCGTCGAGCAATGG 59.936 52.381 0.00 0.00 0.00 3.16
5391 7084 3.192844 CGGAGTGTTGTGGTGTACTCTAT 59.807 47.826 0.00 0.00 39.50 1.98
5392 7085 4.397103 CGGAGTGTTGTGGTGTACTCTATA 59.603 45.833 0.00 0.00 39.50 1.31
5405 7098 6.015265 GGTGTACTCTATACCTTGATTCCCTC 60.015 46.154 0.00 0.00 37.04 4.30
5430 7123 0.610509 TTTTCCGGGCATGCTGCTAA 60.611 50.000 18.92 4.87 44.28 3.09
5436 7135 2.803479 GCATGCTGCTAAGTGCCC 59.197 61.111 11.37 0.00 40.96 5.36
5458 7157 3.674955 CGATTGGTAGTGTCAACGGATGA 60.675 47.826 0.00 0.00 35.05 2.92
5459 7158 3.313012 TTGGTAGTGTCAACGGATGAG 57.687 47.619 0.00 0.00 39.19 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
366 373 2.503375 CGTACGTCGACCACTGCC 60.503 66.667 10.58 0.00 42.86 4.85
574 632 2.279784 CGAGAATCCGGCTCCAGC 60.280 66.667 0.00 0.00 41.14 4.85
575 633 2.419198 CCGAGAATCCGGCTCCAG 59.581 66.667 0.00 0.00 43.25 3.86
585 643 1.645034 CATCGTGCTGTTCCGAGAAT 58.355 50.000 0.00 0.00 36.41 2.40
586 644 1.014044 GCATCGTGCTGTTCCGAGAA 61.014 55.000 3.20 0.00 40.96 2.87
602 660 4.457496 CTCCACGGGCTGACGCAT 62.457 66.667 0.00 0.00 38.10 4.73
611 669 2.629051 GGTGATTAAAGACTCCACGGG 58.371 52.381 0.00 0.00 0.00 5.28
621 679 3.821995 CCGGCCGGGTGATTAAAG 58.178 61.111 37.42 6.27 0.00 1.85
710 768 5.761234 ACCTTCTGTCAAGCATTACGTAAAA 59.239 36.000 12.81 0.00 0.00 1.52
749 807 0.171903 CCTTCAAGCTGGAATTGCGG 59.828 55.000 3.39 0.58 35.28 5.69
811 869 2.701006 CATTACCGACGGCAAGCG 59.299 61.111 15.39 0.00 0.00 4.68
812 870 3.098555 CCATTACCGACGGCAAGC 58.901 61.111 15.39 0.00 0.00 4.01
814 872 2.581208 ATCGCCATTACCGACGGCAA 62.581 55.000 15.39 8.16 46.60 4.52
1101 1161 1.521681 GGTGTAGGTGCGGATGAGC 60.522 63.158 0.00 0.00 37.71 4.26
1267 1327 2.115911 CGGAGTCGGAGGACAGGAG 61.116 68.421 0.00 0.00 45.92 3.69
1353 1413 3.181509 CCATCTCGGAGATTACGGTATCG 60.182 52.174 17.65 0.00 36.12 2.92
1357 1417 2.359981 TCCATCTCGGAGATTACGGT 57.640 50.000 17.65 0.00 39.64 4.83
1465 1525 3.181490 TGACTAACCATCGAATCGACCAG 60.181 47.826 7.77 1.95 39.18 4.00
1536 1596 2.858644 TCCCACCTTCCATTCCTACAT 58.141 47.619 0.00 0.00 0.00 2.29
1776 1836 2.246067 TCTCATCTCCCTCAAGTAGGCT 59.754 50.000 0.00 0.00 45.03 4.58
1803 1863 1.285667 ACACCATCAGGCATCAATCCA 59.714 47.619 0.00 0.00 39.06 3.41
1870 1930 0.102120 CTAACTCTCAGCGCCTCCAG 59.898 60.000 2.29 0.00 0.00 3.86
1900 1960 1.591183 GCAAACATCCACGGCCAAT 59.409 52.632 2.24 0.00 0.00 3.16
1980 2040 1.696336 TCAGTCAAAAGCTCCTCTGCT 59.304 47.619 0.00 0.00 46.40 4.24
2061 2121 5.063017 TCTCTATGTTACCCTCCCTACAG 57.937 47.826 0.00 0.00 0.00 2.74
2259 2319 3.701542 CCTTCTCACAGTGGCTGTCTATA 59.298 47.826 0.00 0.00 43.43 1.31
2337 2397 7.353525 TGGAATTATAGGTCATGATGTTTGGT 58.646 34.615 0.00 0.00 0.00 3.67
2709 2769 6.564709 TCATGAAGTTGAAATGACTCCTTG 57.435 37.500 0.00 0.00 0.00 3.61
2910 2971 5.841810 TGCCGAACTTCAAAATTTCTCATT 58.158 33.333 0.00 0.00 0.00 2.57
2924 2985 6.220726 AGCCAATATTTTAATGCCGAACTT 57.779 33.333 0.00 0.00 0.00 2.66
2930 2991 6.701400 CACAACCTAGCCAATATTTTAATGCC 59.299 38.462 0.00 0.00 0.00 4.40
2943 3004 0.534877 CAGTGCACACAACCTAGCCA 60.535 55.000 21.04 0.00 0.00 4.75
2956 3017 2.343101 GTAATGTAGAACGGCAGTGCA 58.657 47.619 18.61 0.00 0.00 4.57
2965 3026 6.567050 TGATTCCACTACGGTAATGTAGAAC 58.433 40.000 7.84 0.00 43.65 3.01
3032 3093 9.666626 AGAACAATATAGAATCTTACGAAGTCG 57.333 33.333 0.00 0.00 43.93 4.18
3138 3288 1.412343 ACCAAATCACAAACCACCTGC 59.588 47.619 0.00 0.00 0.00 4.85
3139 3289 3.005367 GGTACCAAATCACAAACCACCTG 59.995 47.826 7.15 0.00 0.00 4.00
3332 3490 1.750778 CCCAGAAAACAACAGCACACT 59.249 47.619 0.00 0.00 0.00 3.55
3340 3498 1.200020 CTCCGATGCCCAGAAAACAAC 59.800 52.381 0.00 0.00 0.00 3.32
3352 3510 0.036577 AGCATGCTATCCTCCGATGC 60.037 55.000 21.21 0.00 39.80 3.91
3460 3621 7.734538 ACTGTATTACGTATTTGCAAAATGC 57.265 32.000 17.19 8.08 45.29 3.56
3473 3634 6.704493 CCTGGCAATATGTTACTGTATTACGT 59.296 38.462 0.00 0.00 0.00 3.57
3480 3641 6.546034 GGAATAACCTGGCAATATGTTACTGT 59.454 38.462 0.00 0.00 35.41 3.55
3507 3668 3.004419 GGTCAACTAAGCAACAGGAAACC 59.996 47.826 0.00 0.00 0.00 3.27
3597 3799 3.423539 AAGAAGTGCTGCCTGTATTGA 57.576 42.857 0.00 0.00 0.00 2.57
3621 3824 4.511454 TGTTGTATCAAGTTGTGACTGCTC 59.489 41.667 2.11 0.00 39.72 4.26
3724 3932 7.226918 GGAAGAGAAAAGTAGTAGTTTGCAGTT 59.773 37.037 10.52 3.80 0.00 3.16
3821 4029 7.617041 ACCTTTTTATGTATGCTCAGTTCTC 57.383 36.000 0.00 0.00 0.00 2.87
3893 4101 9.915629 GGGAGTGTAAGTTTCTCATATATACAG 57.084 37.037 0.00 0.00 0.00 2.74
3900 4108 6.681729 AAGTGGGAGTGTAAGTTTCTCATA 57.318 37.500 0.00 0.00 0.00 2.15
3918 4126 1.474077 GATTGCCCTGCAGTAAAGTGG 59.526 52.381 13.81 6.52 40.61 4.00
3920 4128 2.584835 TGATTGCCCTGCAGTAAAGT 57.415 45.000 13.81 0.00 40.61 2.66
3964 4174 9.692749 CACATTTTACACTCTCTAGTCAGTTTA 57.307 33.333 0.00 0.00 31.97 2.01
3974 4184 2.644798 AGGGGCACATTTTACACTCTCT 59.355 45.455 0.00 0.00 0.00 3.10
3983 4193 0.686789 GGCTTGAAGGGGCACATTTT 59.313 50.000 0.00 0.00 0.00 1.82
4008 4218 4.670896 TTCTTTTCCTTGCTCTTTTGGG 57.329 40.909 0.00 0.00 0.00 4.12
4030 4240 5.934625 GCTCATAACCTCTGTTTCTCTTTCA 59.065 40.000 0.00 0.00 35.87 2.69
4036 4246 4.623932 TGTGCTCATAACCTCTGTTTCT 57.376 40.909 0.00 0.00 35.87 2.52
4037 4247 4.154918 CCTTGTGCTCATAACCTCTGTTTC 59.845 45.833 0.00 0.00 35.87 2.78
4063 4273 3.700538 ACTTCATCAAAGCCTGGCATAA 58.299 40.909 22.65 3.36 38.67 1.90
4065 4275 2.226962 ACTTCATCAAAGCCTGGCAT 57.773 45.000 22.65 5.87 38.67 4.40
4066 4276 1.999648 AACTTCATCAAAGCCTGGCA 58.000 45.000 22.65 0.00 38.67 4.92
4067 4277 3.696051 TCATAACTTCATCAAAGCCTGGC 59.304 43.478 11.65 11.65 38.67 4.85
4068 4278 5.188434 TCTCATAACTTCATCAAAGCCTGG 58.812 41.667 0.00 0.00 38.67 4.45
4106 4316 1.813753 CATACAACCACGGCCTCGG 60.814 63.158 0.00 2.93 41.39 4.63
4109 4319 0.623723 AATCCATACAACCACGGCCT 59.376 50.000 0.00 0.00 0.00 5.19
4120 4330 6.262601 CAAAATGTTGACCGGTAATCCATAC 58.737 40.000 7.34 0.00 36.83 2.39
4122 4332 4.381505 GCAAAATGTTGACCGGTAATCCAT 60.382 41.667 7.34 2.51 36.83 3.41
4123 4333 3.057174 GCAAAATGTTGACCGGTAATCCA 60.057 43.478 7.34 0.00 36.83 3.41
4124 4334 3.057174 TGCAAAATGTTGACCGGTAATCC 60.057 43.478 7.34 0.00 36.83 3.01
4126 4336 3.572255 AGTGCAAAATGTTGACCGGTAAT 59.428 39.130 7.34 0.00 36.83 1.89
4128 4338 2.577700 AGTGCAAAATGTTGACCGGTA 58.422 42.857 7.34 0.00 36.83 4.02
4129 4339 1.398692 AGTGCAAAATGTTGACCGGT 58.601 45.000 6.92 6.92 36.83 5.28
4130 4340 2.507339 AAGTGCAAAATGTTGACCGG 57.493 45.000 0.00 0.00 36.83 5.28
4131 4341 2.539274 CCAAAGTGCAAAATGTTGACCG 59.461 45.455 0.00 0.00 36.83 4.79
4132 4342 3.555547 GTCCAAAGTGCAAAATGTTGACC 59.444 43.478 0.00 0.00 36.83 4.02
4179 5828 5.220931 CCTCTTCACACCTCTTTCACTTTTG 60.221 44.000 0.00 0.00 0.00 2.44
4182 5831 3.181450 CCCTCTTCACACCTCTTTCACTT 60.181 47.826 0.00 0.00 0.00 3.16
4185 5834 2.689658 TCCCTCTTCACACCTCTTTCA 58.310 47.619 0.00 0.00 0.00 2.69
4186 5835 3.990959 ATCCCTCTTCACACCTCTTTC 57.009 47.619 0.00 0.00 0.00 2.62
4188 5837 3.791320 TGTATCCCTCTTCACACCTCTT 58.209 45.455 0.00 0.00 0.00 2.85
4204 5853 4.665212 TGTTCAACTCGTCCGTATGTATC 58.335 43.478 0.00 0.00 0.00 2.24
4210 5859 1.338973 AGCTTGTTCAACTCGTCCGTA 59.661 47.619 0.00 0.00 0.00 4.02
4219 5868 2.735823 CAGGCAAGAAGCTTGTTCAAC 58.264 47.619 2.10 0.00 44.60 3.18
4246 5896 3.120321 TGTTCAACTGTAATCTGCCGT 57.880 42.857 0.00 0.00 0.00 5.68
4333 6012 4.039004 TGCTGCTTTGGACATACAACAATT 59.961 37.500 0.00 0.00 0.00 2.32
4334 6013 3.573538 TGCTGCTTTGGACATACAACAAT 59.426 39.130 0.00 0.00 0.00 2.71
4335 6014 2.954989 TGCTGCTTTGGACATACAACAA 59.045 40.909 0.00 0.00 0.00 2.83
4336 6015 2.553602 CTGCTGCTTTGGACATACAACA 59.446 45.455 0.00 0.00 0.00 3.33
4337 6016 2.669391 GCTGCTGCTTTGGACATACAAC 60.669 50.000 8.53 0.00 36.03 3.32
4338 6017 1.541147 GCTGCTGCTTTGGACATACAA 59.459 47.619 8.53 0.00 36.03 2.41
4339 6018 1.167851 GCTGCTGCTTTGGACATACA 58.832 50.000 8.53 0.00 36.03 2.29
4340 6019 1.131883 CTGCTGCTGCTTTGGACATAC 59.868 52.381 17.00 0.00 40.48 2.39
4341 6020 1.456296 CTGCTGCTGCTTTGGACATA 58.544 50.000 17.00 0.00 40.48 2.29
4342 6021 1.248785 CCTGCTGCTGCTTTGGACAT 61.249 55.000 17.00 0.00 40.48 3.06
4343 6022 1.900016 CCTGCTGCTGCTTTGGACA 60.900 57.895 17.00 0.00 40.48 4.02
4344 6023 2.960170 CCTGCTGCTGCTTTGGAC 59.040 61.111 17.00 0.00 40.48 4.02
4345 6024 2.987547 GCCTGCTGCTGCTTTGGA 60.988 61.111 17.00 0.00 40.48 3.53
4366 6045 1.571215 CCGAACCTTGGTAACGGCAC 61.571 60.000 19.16 0.00 42.51 5.01
4367 6046 1.301874 CCGAACCTTGGTAACGGCA 60.302 57.895 19.16 0.00 42.51 5.69
4368 6047 1.301953 ACCGAACCTTGGTAACGGC 60.302 57.895 25.87 3.57 46.18 5.68
4370 6049 1.868469 TTCACCGAACCTTGGTAACG 58.132 50.000 10.61 10.61 37.72 3.18
4371 6050 2.486592 CCATTCACCGAACCTTGGTAAC 59.513 50.000 0.00 0.00 37.72 2.50
4372 6051 2.372504 TCCATTCACCGAACCTTGGTAA 59.627 45.455 0.00 0.00 37.72 2.85
4373 6052 1.979308 TCCATTCACCGAACCTTGGTA 59.021 47.619 0.00 0.00 37.72 3.25
4374 6053 0.768622 TCCATTCACCGAACCTTGGT 59.231 50.000 0.00 0.00 41.47 3.67
4375 6054 1.745087 CATCCATTCACCGAACCTTGG 59.255 52.381 0.00 0.00 0.00 3.61
4376 6055 2.420022 GACATCCATTCACCGAACCTTG 59.580 50.000 0.00 0.00 0.00 3.61
4377 6056 2.039746 TGACATCCATTCACCGAACCTT 59.960 45.455 0.00 0.00 0.00 3.50
4378 6057 1.628340 TGACATCCATTCACCGAACCT 59.372 47.619 0.00 0.00 0.00 3.50
4379 6058 2.107950 TGACATCCATTCACCGAACC 57.892 50.000 0.00 0.00 0.00 3.62
4380 6059 4.701956 ATTTGACATCCATTCACCGAAC 57.298 40.909 0.00 0.00 0.00 3.95
4381 6060 6.356556 AGATATTTGACATCCATTCACCGAA 58.643 36.000 0.00 0.00 0.00 4.30
4382 6061 5.928976 AGATATTTGACATCCATTCACCGA 58.071 37.500 0.00 0.00 0.00 4.69
4383 6062 6.624352 AAGATATTTGACATCCATTCACCG 57.376 37.500 0.00 0.00 0.00 4.94
4384 6063 8.469200 TCAAAAGATATTTGACATCCATTCACC 58.531 33.333 0.00 0.00 33.90 4.02
4385 6064 9.859427 TTCAAAAGATATTTGACATCCATTCAC 57.141 29.630 3.28 0.00 38.05 3.18
4386 6065 9.859427 GTTCAAAAGATATTTGACATCCATTCA 57.141 29.630 3.28 0.00 38.05 2.57
4389 6068 9.865321 CAAGTTCAAAAGATATTTGACATCCAT 57.135 29.630 3.28 0.00 38.05 3.41
4390 6069 8.859090 ACAAGTTCAAAAGATATTTGACATCCA 58.141 29.630 3.28 0.00 38.05 3.41
4391 6070 9.696917 AACAAGTTCAAAAGATATTTGACATCC 57.303 29.630 3.28 0.00 38.05 3.51
4393 6072 8.981647 GCAACAAGTTCAAAAGATATTTGACAT 58.018 29.630 3.28 0.00 38.05 3.06
4394 6073 7.978414 TGCAACAAGTTCAAAAGATATTTGACA 59.022 29.630 3.28 0.00 38.05 3.58
4395 6074 8.351495 TGCAACAAGTTCAAAAGATATTTGAC 57.649 30.769 3.28 0.80 38.05 3.18
4396 6075 8.939201 TTGCAACAAGTTCAAAAGATATTTGA 57.061 26.923 0.00 0.00 36.71 2.69
4397 6076 9.985318 TTTTGCAACAAGTTCAAAAGATATTTG 57.015 25.926 0.00 0.00 35.53 2.32
4419 6098 4.976731 GCTATGCTTCTGATGATGCTTTTG 59.023 41.667 0.00 0.00 41.96 2.44
4420 6099 4.643334 TGCTATGCTTCTGATGATGCTTTT 59.357 37.500 0.00 0.00 41.96 2.27
4421 6100 4.204799 TGCTATGCTTCTGATGATGCTTT 58.795 39.130 0.00 0.00 41.96 3.51
4422 6101 3.816994 TGCTATGCTTCTGATGATGCTT 58.183 40.909 0.00 0.00 41.96 3.91
4423 6102 3.487120 TGCTATGCTTCTGATGATGCT 57.513 42.857 0.00 0.00 41.96 3.79
4424 6103 4.563337 TTTGCTATGCTTCTGATGATGC 57.437 40.909 0.00 0.00 41.84 3.91
4425 6104 5.402568 GCATTTTGCTATGCTTCTGATGATG 59.597 40.000 10.46 0.00 45.80 3.07
4426 6105 5.529791 GCATTTTGCTATGCTTCTGATGAT 58.470 37.500 10.46 0.00 45.80 2.45
4427 6106 4.928601 GCATTTTGCTATGCTTCTGATGA 58.071 39.130 10.46 0.00 45.80 2.92
4441 6120 4.184079 ACATTCCAGAAGAGCATTTTGC 57.816 40.909 0.00 0.00 45.46 3.68
4442 6121 5.747197 GCATACATTCCAGAAGAGCATTTTG 59.253 40.000 0.00 0.00 0.00 2.44
4443 6122 5.163478 GGCATACATTCCAGAAGAGCATTTT 60.163 40.000 0.00 0.00 0.00 1.82
4444 6123 4.340381 GGCATACATTCCAGAAGAGCATTT 59.660 41.667 0.00 0.00 0.00 2.32
4445 6124 3.887716 GGCATACATTCCAGAAGAGCATT 59.112 43.478 0.00 0.00 0.00 3.56
4446 6125 3.137913 AGGCATACATTCCAGAAGAGCAT 59.862 43.478 0.00 0.00 0.00 3.79
4447 6126 2.507058 AGGCATACATTCCAGAAGAGCA 59.493 45.455 0.00 0.00 0.00 4.26
4448 6127 3.137533 GAGGCATACATTCCAGAAGAGC 58.862 50.000 0.00 0.00 0.00 4.09
4449 6128 4.100653 TCAGAGGCATACATTCCAGAAGAG 59.899 45.833 0.00 0.00 0.00 2.85
4450 6129 4.033009 TCAGAGGCATACATTCCAGAAGA 58.967 43.478 0.00 0.00 0.00 2.87
4451 6130 4.412796 TCAGAGGCATACATTCCAGAAG 57.587 45.455 0.00 0.00 0.00 2.85
4452 6131 4.842531 TTCAGAGGCATACATTCCAGAA 57.157 40.909 0.00 0.00 0.00 3.02
4453 6132 4.842531 TTTCAGAGGCATACATTCCAGA 57.157 40.909 0.00 0.00 0.00 3.86
4454 6133 4.946157 ACTTTTCAGAGGCATACATTCCAG 59.054 41.667 0.00 0.00 0.00 3.86
4455 6134 4.922206 ACTTTTCAGAGGCATACATTCCA 58.078 39.130 0.00 0.00 0.00 3.53
4456 6135 4.943705 TGACTTTTCAGAGGCATACATTCC 59.056 41.667 0.00 0.00 27.08 3.01
4457 6136 6.500684 TTGACTTTTCAGAGGCATACATTC 57.499 37.500 0.00 0.00 33.90 2.67
4458 6137 6.899393 TTTGACTTTTCAGAGGCATACATT 57.101 33.333 0.00 0.00 33.90 2.71
4459 6138 6.899393 TTTTGACTTTTCAGAGGCATACAT 57.101 33.333 0.00 0.00 33.90 2.29
4460 6139 6.707440 TTTTTGACTTTTCAGAGGCATACA 57.293 33.333 0.00 0.00 33.90 2.29
4480 6159 5.590530 TGTATTGCCAGAAGTGTGTTTTT 57.409 34.783 0.00 0.00 0.00 1.94
4481 6160 5.789643 ATGTATTGCCAGAAGTGTGTTTT 57.210 34.783 0.00 0.00 0.00 2.43
4482 6161 6.892658 TTATGTATTGCCAGAAGTGTGTTT 57.107 33.333 0.00 0.00 0.00 2.83
4483 6162 6.658816 TCATTATGTATTGCCAGAAGTGTGTT 59.341 34.615 0.00 0.00 0.00 3.32
4484 6163 6.179756 TCATTATGTATTGCCAGAAGTGTGT 58.820 36.000 0.00 0.00 0.00 3.72
4485 6164 6.682423 TCATTATGTATTGCCAGAAGTGTG 57.318 37.500 0.00 0.00 0.00 3.82
4486 6165 7.701539 TTTCATTATGTATTGCCAGAAGTGT 57.298 32.000 0.00 0.00 0.00 3.55
4487 6166 9.888878 CTATTTCATTATGTATTGCCAGAAGTG 57.111 33.333 0.00 0.00 0.00 3.16
4488 6167 9.851686 TCTATTTCATTATGTATTGCCAGAAGT 57.148 29.630 0.00 0.00 0.00 3.01
4491 6170 9.716531 CTCTCTATTTCATTATGTATTGCCAGA 57.283 33.333 0.00 0.00 0.00 3.86
4492 6171 9.716531 TCTCTCTATTTCATTATGTATTGCCAG 57.283 33.333 0.00 0.00 0.00 4.85
4500 6179 8.543774 ACCAGTGTTCTCTCTATTTCATTATGT 58.456 33.333 0.00 0.00 0.00 2.29
4501 6180 8.954950 ACCAGTGTTCTCTCTATTTCATTATG 57.045 34.615 0.00 0.00 0.00 1.90
4502 6181 9.965902 AAACCAGTGTTCTCTCTATTTCATTAT 57.034 29.630 0.00 0.00 32.15 1.28
4503 6182 9.793259 AAAACCAGTGTTCTCTCTATTTCATTA 57.207 29.630 0.00 0.00 32.15 1.90
4504 6183 8.697507 AAAACCAGTGTTCTCTCTATTTCATT 57.302 30.769 0.00 0.00 32.15 2.57
4505 6184 9.965902 ATAAAACCAGTGTTCTCTCTATTTCAT 57.034 29.630 0.00 0.00 32.15 2.57
4508 6187 9.892130 CCTATAAAACCAGTGTTCTCTCTATTT 57.108 33.333 0.00 0.00 32.15 1.40
4509 6188 8.487028 CCCTATAAAACCAGTGTTCTCTCTATT 58.513 37.037 0.00 0.00 32.15 1.73
4510 6189 7.419172 GCCCTATAAAACCAGTGTTCTCTCTAT 60.419 40.741 0.00 0.00 32.15 1.98
4511 6190 6.127140 GCCCTATAAAACCAGTGTTCTCTCTA 60.127 42.308 0.00 0.00 32.15 2.43
4512 6191 5.338463 GCCCTATAAAACCAGTGTTCTCTCT 60.338 44.000 0.00 0.00 32.15 3.10
4513 6192 4.876679 GCCCTATAAAACCAGTGTTCTCTC 59.123 45.833 0.00 0.00 32.15 3.20
4514 6193 4.288626 TGCCCTATAAAACCAGTGTTCTCT 59.711 41.667 0.00 0.00 32.15 3.10
4515 6194 4.585879 TGCCCTATAAAACCAGTGTTCTC 58.414 43.478 0.00 0.00 32.15 2.87
4516 6195 4.650972 TGCCCTATAAAACCAGTGTTCT 57.349 40.909 0.00 0.00 32.15 3.01
4517 6196 5.715434 TTTGCCCTATAAAACCAGTGTTC 57.285 39.130 0.00 0.00 32.15 3.18
4518 6197 7.784470 TTATTTGCCCTATAAAACCAGTGTT 57.216 32.000 0.00 0.00 35.82 3.32
4519 6198 7.784470 TTTATTTGCCCTATAAAACCAGTGT 57.216 32.000 0.00 0.00 0.00 3.55
4520 6199 9.313118 GATTTTATTTGCCCTATAAAACCAGTG 57.687 33.333 8.83 0.00 39.14 3.66
4521 6200 9.267071 AGATTTTATTTGCCCTATAAAACCAGT 57.733 29.630 8.83 0.00 39.14 4.00
4522 6201 9.750125 GAGATTTTATTTGCCCTATAAAACCAG 57.250 33.333 8.83 0.00 39.14 4.00
4523 6202 9.261035 TGAGATTTTATTTGCCCTATAAAACCA 57.739 29.630 8.83 6.36 39.14 3.67
4524 6203 9.750125 CTGAGATTTTATTTGCCCTATAAAACC 57.250 33.333 8.83 2.32 39.14 3.27
4525 6204 9.750125 CCTGAGATTTTATTTGCCCTATAAAAC 57.250 33.333 8.83 5.47 39.14 2.43
4526 6205 9.487442 ACCTGAGATTTTATTTGCCCTATAAAA 57.513 29.630 0.00 0.00 40.04 1.52
4527 6206 9.487442 AACCTGAGATTTTATTTGCCCTATAAA 57.513 29.630 0.00 0.00 0.00 1.40
4528 6207 8.912988 CAACCTGAGATTTTATTTGCCCTATAA 58.087 33.333 0.00 0.00 0.00 0.98
4529 6208 8.278639 TCAACCTGAGATTTTATTTGCCCTATA 58.721 33.333 0.00 0.00 0.00 1.31
4530 6209 7.125391 TCAACCTGAGATTTTATTTGCCCTAT 58.875 34.615 0.00 0.00 0.00 2.57
4531 6210 6.489603 TCAACCTGAGATTTTATTTGCCCTA 58.510 36.000 0.00 0.00 0.00 3.53
4532 6211 5.332743 TCAACCTGAGATTTTATTTGCCCT 58.667 37.500 0.00 0.00 0.00 5.19
4533 6212 5.659440 TCAACCTGAGATTTTATTTGCCC 57.341 39.130 0.00 0.00 0.00 5.36
4534 6213 6.036408 GCAATCAACCTGAGATTTTATTTGCC 59.964 38.462 0.00 0.00 33.64 4.52
4535 6214 6.591062 TGCAATCAACCTGAGATTTTATTTGC 59.409 34.615 0.00 0.00 33.64 3.68
4536 6215 8.537049 TTGCAATCAACCTGAGATTTTATTTG 57.463 30.769 0.00 0.00 33.64 2.32
4537 6216 9.729281 AATTGCAATCAACCTGAGATTTTATTT 57.271 25.926 13.38 0.00 33.64 1.40
4538 6217 9.374838 GAATTGCAATCAACCTGAGATTTTATT 57.625 29.630 13.38 0.00 33.64 1.40
4539 6218 8.533657 TGAATTGCAATCAACCTGAGATTTTAT 58.466 29.630 13.38 0.00 33.64 1.40
4540 6219 7.894708 TGAATTGCAATCAACCTGAGATTTTA 58.105 30.769 13.38 0.00 33.64 1.52
4541 6220 6.761312 TGAATTGCAATCAACCTGAGATTTT 58.239 32.000 13.38 0.00 33.64 1.82
4542 6221 6.209986 TCTGAATTGCAATCAACCTGAGATTT 59.790 34.615 13.38 0.00 33.64 2.17
4543 6222 5.713389 TCTGAATTGCAATCAACCTGAGATT 59.287 36.000 13.38 0.00 36.19 2.40
4544 6223 5.258841 TCTGAATTGCAATCAACCTGAGAT 58.741 37.500 13.38 0.00 34.60 2.75
4545 6224 4.654915 TCTGAATTGCAATCAACCTGAGA 58.345 39.130 13.38 2.67 34.60 3.27
4546 6225 5.381174 TTCTGAATTGCAATCAACCTGAG 57.619 39.130 13.38 0.00 34.60 3.35
4547 6226 5.787953 TTTCTGAATTGCAATCAACCTGA 57.212 34.783 13.38 8.97 34.60 3.86
4548 6227 5.754406 TGTTTTCTGAATTGCAATCAACCTG 59.246 36.000 13.38 6.95 34.60 4.00
4549 6228 5.916318 TGTTTTCTGAATTGCAATCAACCT 58.084 33.333 13.38 0.00 34.60 3.50
4550 6229 6.601741 TTGTTTTCTGAATTGCAATCAACC 57.398 33.333 13.38 3.49 34.60 3.77
4551 6230 7.687445 ACTTTGTTTTCTGAATTGCAATCAAC 58.313 30.769 13.38 8.18 34.60 3.18
4552 6231 7.846644 ACTTTGTTTTCTGAATTGCAATCAA 57.153 28.000 13.38 7.09 36.51 2.57
4553 6232 7.254050 CGAACTTTGTTTTCTGAATTGCAATCA 60.254 33.333 13.38 11.29 0.00 2.57
4554 6233 7.059212 CGAACTTTGTTTTCTGAATTGCAATC 58.941 34.615 13.38 7.13 0.00 2.67
4555 6234 6.018832 CCGAACTTTGTTTTCTGAATTGCAAT 60.019 34.615 5.99 5.99 0.00 3.56
4556 6235 5.290643 CCGAACTTTGTTTTCTGAATTGCAA 59.709 36.000 0.00 0.00 0.00 4.08
4557 6236 4.803088 CCGAACTTTGTTTTCTGAATTGCA 59.197 37.500 0.00 0.00 0.00 4.08
4558 6237 5.040635 TCCGAACTTTGTTTTCTGAATTGC 58.959 37.500 0.00 0.00 0.00 3.56
4559 6238 7.434897 TCAATCCGAACTTTGTTTTCTGAATTG 59.565 33.333 0.00 0.00 0.00 2.32
4560 6239 7.488322 TCAATCCGAACTTTGTTTTCTGAATT 58.512 30.769 0.00 0.00 0.00 2.17
4561 6240 7.038154 TCAATCCGAACTTTGTTTTCTGAAT 57.962 32.000 0.00 0.00 0.00 2.57
4562 6241 6.443934 TCAATCCGAACTTTGTTTTCTGAA 57.556 33.333 0.00 0.00 0.00 3.02
4563 6242 6.633500 ATCAATCCGAACTTTGTTTTCTGA 57.367 33.333 0.00 0.00 0.00 3.27
4564 6243 6.346040 GCAATCAATCCGAACTTTGTTTTCTG 60.346 38.462 0.00 0.00 0.00 3.02
4565 6244 5.691754 GCAATCAATCCGAACTTTGTTTTCT 59.308 36.000 0.00 0.00 0.00 2.52
4566 6245 5.387342 CGCAATCAATCCGAACTTTGTTTTC 60.387 40.000 0.00 0.00 0.00 2.29
4567 6246 4.444056 CGCAATCAATCCGAACTTTGTTTT 59.556 37.500 0.00 0.00 0.00 2.43
4568 6247 3.980775 CGCAATCAATCCGAACTTTGTTT 59.019 39.130 0.00 0.00 0.00 2.83
4569 6248 3.564511 CGCAATCAATCCGAACTTTGTT 58.435 40.909 0.00 0.00 0.00 2.83
4570 6249 2.668279 GCGCAATCAATCCGAACTTTGT 60.668 45.455 0.30 0.00 0.00 2.83
4571 6250 1.913403 GCGCAATCAATCCGAACTTTG 59.087 47.619 0.30 0.00 0.00 2.77
4572 6251 1.465689 CGCGCAATCAATCCGAACTTT 60.466 47.619 8.75 0.00 0.00 2.66
4573 6252 0.096976 CGCGCAATCAATCCGAACTT 59.903 50.000 8.75 0.00 0.00 2.66
4574 6253 1.705337 CCGCGCAATCAATCCGAACT 61.705 55.000 8.75 0.00 0.00 3.01
4575 6254 1.297598 CCGCGCAATCAATCCGAAC 60.298 57.895 8.75 0.00 0.00 3.95
4576 6255 1.743623 ACCGCGCAATCAATCCGAA 60.744 52.632 8.75 0.00 0.00 4.30
4577 6256 2.125310 ACCGCGCAATCAATCCGA 60.125 55.556 8.75 0.00 0.00 4.55
4578 6257 2.023181 CACCGCGCAATCAATCCG 59.977 61.111 8.75 0.00 0.00 4.18
4579 6258 2.278142 GCACCGCGCAATCAATCC 60.278 61.111 8.75 0.00 41.79 3.01
4590 6269 0.724785 GTGCTAAAAGAACGCACCGC 60.725 55.000 2.43 0.00 46.09 5.68
4591 6270 3.361443 GTGCTAAAAGAACGCACCG 57.639 52.632 2.43 0.00 46.09 4.94
4597 6276 4.319901 CGGTATTTTGCGTGCTAAAAGAAC 59.680 41.667 5.62 4.46 31.31 3.01
4598 6277 4.213694 TCGGTATTTTGCGTGCTAAAAGAA 59.786 37.500 5.62 0.00 31.31 2.52
4599 6278 3.747010 TCGGTATTTTGCGTGCTAAAAGA 59.253 39.130 5.62 0.49 31.31 2.52
4600 6279 3.844099 GTCGGTATTTTGCGTGCTAAAAG 59.156 43.478 5.62 0.00 31.31 2.27
4601 6280 3.499157 AGTCGGTATTTTGCGTGCTAAAA 59.501 39.130 5.62 5.40 0.00 1.52
4602 6281 3.068560 AGTCGGTATTTTGCGTGCTAAA 58.931 40.909 4.08 4.08 0.00 1.85
4603 6282 2.413796 CAGTCGGTATTTTGCGTGCTAA 59.586 45.455 0.00 0.00 0.00 3.09
4604 6283 1.996898 CAGTCGGTATTTTGCGTGCTA 59.003 47.619 0.00 0.00 0.00 3.49
4605 6284 0.796312 CAGTCGGTATTTTGCGTGCT 59.204 50.000 0.00 0.00 0.00 4.40
4606 6285 0.179200 CCAGTCGGTATTTTGCGTGC 60.179 55.000 0.00 0.00 0.00 5.34
4607 6286 0.446222 CCCAGTCGGTATTTTGCGTG 59.554 55.000 0.00 0.00 0.00 5.34
4608 6287 1.303091 GCCCAGTCGGTATTTTGCGT 61.303 55.000 0.00 0.00 0.00 5.24
4609 6288 1.427819 GCCCAGTCGGTATTTTGCG 59.572 57.895 0.00 0.00 0.00 4.85
4610 6289 0.963355 TGGCCCAGTCGGTATTTTGC 60.963 55.000 0.00 0.00 0.00 3.68
4611 6290 1.540267 TTGGCCCAGTCGGTATTTTG 58.460 50.000 0.00 0.00 0.00 2.44
4612 6291 2.296073 TTTGGCCCAGTCGGTATTTT 57.704 45.000 0.00 0.00 0.00 1.82
4613 6292 2.099405 CATTTGGCCCAGTCGGTATTT 58.901 47.619 0.00 0.00 0.00 1.40
4614 6293 1.283613 TCATTTGGCCCAGTCGGTATT 59.716 47.619 0.00 0.00 0.00 1.89
4615 6294 0.916086 TCATTTGGCCCAGTCGGTAT 59.084 50.000 0.00 0.00 0.00 2.73
4616 6295 0.693622 TTCATTTGGCCCAGTCGGTA 59.306 50.000 0.00 0.00 0.00 4.02
4617 6296 0.178975 TTTCATTTGGCCCAGTCGGT 60.179 50.000 0.00 0.00 0.00 4.69
4618 6297 0.965439 TTTTCATTTGGCCCAGTCGG 59.035 50.000 0.00 0.00 0.00 4.79
4619 6298 1.336795 GGTTTTCATTTGGCCCAGTCG 60.337 52.381 0.00 0.00 0.00 4.18
4620 6299 1.001974 GGGTTTTCATTTGGCCCAGTC 59.998 52.381 0.00 0.00 39.13 3.51
4621 6300 1.055849 GGGTTTTCATTTGGCCCAGT 58.944 50.000 0.00 0.00 39.13 4.00
4622 6301 0.324614 GGGGTTTTCATTTGGCCCAG 59.675 55.000 0.00 0.00 41.02 4.45
4623 6302 0.400525 TGGGGTTTTCATTTGGCCCA 60.401 50.000 0.00 0.00 41.02 5.36
4624 6303 0.991146 ATGGGGTTTTCATTTGGCCC 59.009 50.000 0.00 0.00 38.61 5.80
4625 6304 2.419990 GCTATGGGGTTTTCATTTGGCC 60.420 50.000 0.00 0.00 0.00 5.36
4626 6305 2.738321 CGCTATGGGGTTTTCATTTGGC 60.738 50.000 0.00 0.00 0.00 4.52
4627 6306 2.159114 CCGCTATGGGGTTTTCATTTGG 60.159 50.000 0.00 0.00 0.00 3.28
4628 6307 2.495669 ACCGCTATGGGGTTTTCATTTG 59.504 45.455 0.25 0.00 46.84 2.32
4629 6308 2.815158 ACCGCTATGGGGTTTTCATTT 58.185 42.857 0.25 0.00 46.84 2.32
4630 6309 2.525105 ACCGCTATGGGGTTTTCATT 57.475 45.000 0.25 0.00 46.84 2.57
4631 6310 3.876309 ATACCGCTATGGGGTTTTCAT 57.124 42.857 11.40 0.00 46.84 2.57
4632 6311 4.986054 ATATACCGCTATGGGGTTTTCA 57.014 40.909 11.40 0.00 46.84 2.69
4633 6312 4.698780 GGAATATACCGCTATGGGGTTTTC 59.301 45.833 11.40 11.50 46.84 2.29
4634 6313 4.105057 TGGAATATACCGCTATGGGGTTTT 59.895 41.667 11.40 4.35 46.84 2.43
4635 6314 3.653836 TGGAATATACCGCTATGGGGTTT 59.346 43.478 11.40 6.78 46.84 3.27
4636 6315 3.253220 TGGAATATACCGCTATGGGGTT 58.747 45.455 11.40 3.44 46.84 4.11
4638 6317 4.040461 CCTATGGAATATACCGCTATGGGG 59.960 50.000 0.00 0.00 44.64 4.96
4639 6318 4.503296 GCCTATGGAATATACCGCTATGGG 60.503 50.000 0.00 0.00 44.64 4.00
4640 6319 4.503296 GGCCTATGGAATATACCGCTATGG 60.503 50.000 0.00 0.00 46.41 2.74
4641 6320 4.503296 GGGCCTATGGAATATACCGCTATG 60.503 50.000 0.84 0.00 0.00 2.23
4642 6321 3.646637 GGGCCTATGGAATATACCGCTAT 59.353 47.826 0.84 0.00 0.00 2.97
4643 6322 3.036091 GGGCCTATGGAATATACCGCTA 58.964 50.000 0.84 0.00 0.00 4.26
4644 6323 1.838077 GGGCCTATGGAATATACCGCT 59.162 52.381 0.84 0.00 0.00 5.52
4645 6324 1.838077 AGGGCCTATGGAATATACCGC 59.162 52.381 2.82 0.00 0.00 5.68
4646 6325 2.420129 GCAGGGCCTATGGAATATACCG 60.420 54.545 5.28 0.00 0.00 4.02
4647 6326 2.576191 TGCAGGGCCTATGGAATATACC 59.424 50.000 5.28 0.00 0.00 2.73
4648 6327 4.010349 GTTGCAGGGCCTATGGAATATAC 58.990 47.826 5.28 3.57 30.42 1.47
4649 6328 3.916349 AGTTGCAGGGCCTATGGAATATA 59.084 43.478 5.28 0.00 30.42 0.86
4650 6329 2.718609 AGTTGCAGGGCCTATGGAATAT 59.281 45.455 5.28 7.75 30.42 1.28
4651 6330 2.135189 AGTTGCAGGGCCTATGGAATA 58.865 47.619 5.28 0.00 30.42 1.75
4652 6331 0.929244 AGTTGCAGGGCCTATGGAAT 59.071 50.000 5.28 5.66 30.42 3.01
4653 6332 0.704076 AAGTTGCAGGGCCTATGGAA 59.296 50.000 5.28 7.05 0.00 3.53
4654 6333 0.704076 AAAGTTGCAGGGCCTATGGA 59.296 50.000 5.28 0.00 0.00 3.41
4655 6334 2.024414 GTAAAGTTGCAGGGCCTATGG 58.976 52.381 5.28 0.00 0.00 2.74
4656 6335 2.684881 CTGTAAAGTTGCAGGGCCTATG 59.315 50.000 5.28 2.99 37.27 2.23
4657 6336 2.945890 GCTGTAAAGTTGCAGGGCCTAT 60.946 50.000 5.28 0.00 40.63 2.57
4658 6337 1.613255 GCTGTAAAGTTGCAGGGCCTA 60.613 52.381 5.28 0.00 40.63 3.93
4659 6338 0.895559 GCTGTAAAGTTGCAGGGCCT 60.896 55.000 0.00 0.00 40.63 5.19
4660 6339 1.586541 GCTGTAAAGTTGCAGGGCC 59.413 57.895 10.56 0.00 40.63 5.80
4661 6340 1.586541 GGCTGTAAAGTTGCAGGGC 59.413 57.895 10.56 0.00 40.63 5.19
4662 6341 0.539438 TGGGCTGTAAAGTTGCAGGG 60.539 55.000 10.56 0.00 40.63 4.45
4663 6342 0.883833 CTGGGCTGTAAAGTTGCAGG 59.116 55.000 10.56 0.00 40.63 4.85
4664 6343 0.242017 GCTGGGCTGTAAAGTTGCAG 59.758 55.000 4.92 4.92 42.76 4.41
4665 6344 1.178534 GGCTGGGCTGTAAAGTTGCA 61.179 55.000 0.00 0.00 0.00 4.08
4666 6345 1.586541 GGCTGGGCTGTAAAGTTGC 59.413 57.895 0.00 0.00 0.00 4.17
4667 6346 1.586154 CGGGCTGGGCTGTAAAGTTG 61.586 60.000 0.00 0.00 0.00 3.16
4668 6347 1.303317 CGGGCTGGGCTGTAAAGTT 60.303 57.895 0.00 0.00 0.00 2.66
4669 6348 2.351276 CGGGCTGGGCTGTAAAGT 59.649 61.111 0.00 0.00 0.00 2.66
4670 6349 3.134127 GCGGGCTGGGCTGTAAAG 61.134 66.667 4.95 0.00 0.00 1.85
4671 6350 1.843462 TAAGCGGGCTGGGCTGTAAA 61.843 55.000 0.00 0.00 41.39 2.01
4672 6351 2.252072 CTAAGCGGGCTGGGCTGTAA 62.252 60.000 0.00 0.00 41.39 2.41
4673 6352 2.685743 TAAGCGGGCTGGGCTGTA 60.686 61.111 0.00 0.00 41.39 2.74
4674 6353 4.101448 CTAAGCGGGCTGGGCTGT 62.101 66.667 0.00 0.00 41.39 4.40
4682 6361 4.540735 TAAGCGGGCTAAGCGGGC 62.541 66.667 0.00 0.00 40.04 6.13
4683 6362 2.280186 CTAAGCGGGCTAAGCGGG 60.280 66.667 0.00 0.00 40.04 6.13
4684 6363 0.461339 TTTCTAAGCGGGCTAAGCGG 60.461 55.000 0.00 0.00 40.04 5.52
4685 6364 1.365699 TTTTCTAAGCGGGCTAAGCG 58.634 50.000 0.00 0.00 40.04 4.68
4686 6365 2.475685 CGTTTTTCTAAGCGGGCTAAGC 60.476 50.000 0.00 0.00 34.78 3.09
4687 6366 2.475685 GCGTTTTTCTAAGCGGGCTAAG 60.476 50.000 0.00 0.00 38.26 2.18
4688 6367 1.465777 GCGTTTTTCTAAGCGGGCTAA 59.534 47.619 0.00 0.00 38.26 3.09
4689 6368 1.081094 GCGTTTTTCTAAGCGGGCTA 58.919 50.000 0.00 0.00 38.26 3.93
4717 6396 2.403561 GAGAGGGAAGGTGGAGCTATT 58.596 52.381 0.00 0.00 0.00 1.73
4718 6397 1.755977 CGAGAGGGAAGGTGGAGCTAT 60.756 57.143 0.00 0.00 0.00 2.97
4722 6401 1.671901 GCTCGAGAGGGAAGGTGGAG 61.672 65.000 18.75 0.00 0.00 3.86
4723 6402 1.682684 GCTCGAGAGGGAAGGTGGA 60.683 63.158 18.75 0.00 0.00 4.02
4724 6403 2.896443 GCTCGAGAGGGAAGGTGG 59.104 66.667 18.75 0.00 0.00 4.61
4725 6404 2.492090 CGCTCGAGAGGGAAGGTG 59.508 66.667 18.75 0.00 43.22 4.00
4727 6406 2.756283 ACCGCTCGAGAGGGAAGG 60.756 66.667 34.27 19.24 43.22 3.46
4747 6430 2.437085 ATTTTGGTTCGGAGGGGATC 57.563 50.000 0.00 0.00 0.00 3.36
4771 6455 1.379146 GGAGGTTTCGGCCCTCTTT 59.621 57.895 13.29 0.00 46.43 2.52
5147 6839 4.814041 AGGCAGAGAGGGAGGGGC 62.814 72.222 0.00 0.00 0.00 5.80
5215 6907 1.670674 GCGATAGACCACCGTTCACAA 60.671 52.381 0.00 0.00 39.76 3.33
5228 6920 3.621268 CCAATCAAAGGAAACGCGATAGA 59.379 43.478 15.93 0.00 39.76 1.98
5239 6931 2.673775 TGCCTGAACCAATCAAAGGA 57.326 45.000 0.00 0.00 37.67 3.36
5311 7003 1.075542 TTTCCTATGTGCTGAACGCG 58.924 50.000 3.53 3.53 43.27 6.01
5363 7056 0.884704 ACCACAACACTCCGCACATC 60.885 55.000 0.00 0.00 0.00 3.06
5405 7098 1.205417 AGCATGCCCGGAAAATTCTTG 59.795 47.619 15.66 0.00 0.00 3.02
5430 7123 0.249398 GACACTACCAATCGGGCACT 59.751 55.000 0.00 0.00 42.05 4.40
5436 7135 2.357327 TCCGTTGACACTACCAATCG 57.643 50.000 0.00 0.00 0.00 3.34
5458 7157 3.555586 GGCATGAACAAAAACAGCATCCT 60.556 43.478 0.00 0.00 0.00 3.24
5459 7158 2.738314 GGCATGAACAAAAACAGCATCC 59.262 45.455 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.