Multiple sequence alignment - TraesCS4A01G014100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G014100 chr4A 100.000 4175 0 0 1 4175 8590156 8585982 0.000000e+00 7710
1 TraesCS4A01G014100 chr4A 100.000 376 0 0 4486 4861 8585671 8585296 0.000000e+00 695
2 TraesCS4A01G014100 chr4A 93.617 235 10 2 65 294 99024490 99024256 3.600000e-91 346
3 TraesCS4A01G014100 chr4B 88.865 2362 124 76 557 2849 574523920 574526211 0.000000e+00 2776
4 TraesCS4A01G014100 chr4B 91.652 1114 55 19 2956 4052 574526601 574527693 0.000000e+00 1507
5 TraesCS4A01G014100 chr4B 81.178 781 78 42 3318 4057 134118778 134118026 9.130000e-157 564
6 TraesCS4A01G014100 chr4B 87.946 224 22 3 4623 4844 574527719 574527939 4.830000e-65 259
7 TraesCS4A01G014100 chr4B 91.053 190 10 3 2719 2906 574526325 574526509 2.900000e-62 250
8 TraesCS4A01G014100 chr4B 89.394 132 8 2 2719 2849 574526205 574526331 1.400000e-35 161
9 TraesCS4A01G014100 chr4D 93.713 1511 52 18 1354 2849 459583593 459585075 0.000000e+00 2224
10 TraesCS4A01G014100 chr4D 92.344 849 40 10 3307 4136 459585913 459586755 0.000000e+00 1184
11 TraesCS4A01G014100 chr4D 87.537 674 45 21 565 1219 459582932 459583585 0.000000e+00 743
12 TraesCS4A01G014100 chr4D 87.684 544 37 10 2963 3488 459585382 459585913 1.500000e-169 606
13 TraesCS4A01G014100 chr4D 85.957 470 54 5 3580 4040 231931972 231932438 4.370000e-135 492
14 TraesCS4A01G014100 chr4D 90.421 261 22 2 4584 4844 459587218 459587475 1.680000e-89 340
15 TraesCS4A01G014100 chr4D 89.286 252 18 5 2719 2967 459585069 459585314 1.700000e-79 307
16 TraesCS4A01G014100 chr1B 85.851 523 56 9 3528 4041 569853461 569852948 1.540000e-149 540
17 TraesCS4A01G014100 chr1B 85.259 502 57 8 3566 4057 573739053 573738559 7.260000e-138 501
18 TraesCS4A01G014100 chr1B 93.644 236 10 2 65 295 24633737 24633972 1.000000e-91 348
19 TraesCS4A01G014100 chr5B 85.800 500 56 7 3530 4020 117962423 117962916 2.590000e-142 516
20 TraesCS4A01G014100 chr2B 85.115 524 56 12 3529 4040 220959981 220960494 2.590000e-142 516
21 TraesCS4A01G014100 chr3B 84.661 502 60 8 3566 4057 262256596 262256102 7.320000e-133 484
22 TraesCS4A01G014100 chr7A 93.724 239 9 3 62 294 721097167 721097405 2.150000e-93 353
23 TraesCS4A01G014100 chr5A 93.697 238 10 2 63 295 487278609 487278846 7.740000e-93 351
24 TraesCS4A01G014100 chr1D 93.671 237 10 2 64 295 309071964 309072200 2.780000e-92 350
25 TraesCS4A01G014100 chr5D 93.644 236 10 2 64 294 129481344 129481579 1.000000e-91 348
26 TraesCS4A01G014100 chr7D 93.617 235 10 2 65 294 45145491 45145725 3.600000e-91 346
27 TraesCS4A01G014100 chr6D 93.617 235 10 2 65 294 413720930 413721164 3.600000e-91 346
28 TraesCS4A01G014100 chr3D 93.617 235 9 3 65 294 83889610 83889377 3.600000e-91 346


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G014100 chr4A 8585296 8590156 4860 True 4202.500000 7710 100.000000 1 4861 2 chr4A.!!$R2 4860
1 TraesCS4A01G014100 chr4B 574523920 574527939 4019 False 990.600000 2776 89.782000 557 4844 5 chr4B.!!$F1 4287
2 TraesCS4A01G014100 chr4B 134118026 134118778 752 True 564.000000 564 81.178000 3318 4057 1 chr4B.!!$R1 739
3 TraesCS4A01G014100 chr4D 459582932 459587475 4543 False 900.666667 2224 90.164167 565 4844 6 chr4D.!!$F2 4279
4 TraesCS4A01G014100 chr1B 569852948 569853461 513 True 540.000000 540 85.851000 3528 4041 1 chr1B.!!$R1 513
5 TraesCS4A01G014100 chr2B 220959981 220960494 513 False 516.000000 516 85.115000 3529 4040 1 chr2B.!!$F1 511

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
69 70 0.109723 TGTTGGTGGCCTTGTACTCC 59.890 55.0 3.32 0.0 0.0 3.85 F
1081 1157 0.105593 CCCATGGACATCGACTGGAG 59.894 60.0 15.22 0.0 0.0 3.86 F
1321 1399 0.108585 CGAGGAGAGGAGAGGAGAGG 59.891 65.0 0.00 0.0 0.0 3.69 F
2801 3148 0.445436 CAATCAGTCGAGCACTTGGC 59.555 55.0 0.00 0.0 45.3 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1316 1394 0.028770 CTCGCTGTGTCGATCCTCTC 59.971 60.0 0.00 0.0 37.87 3.20 R
2029 2124 0.614979 TCCCGGAGAAGAGGTTCCTG 60.615 60.0 0.73 0.0 32.48 3.86 R
3267 3691 0.391228 ACAGTACACGGTCATGCACA 59.609 50.0 0.00 0.0 0.00 4.57 R
4496 5190 0.031917 TCCCCTATACAACCTCCGCA 60.032 55.0 0.00 0.0 0.00 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 7.913674 TTTGATTTAATTATTGTTGGTGGCC 57.086 32.000 0.00 0.00 0.00 5.36
61 62 6.865834 TGATTTAATTATTGTTGGTGGCCT 57.134 33.333 3.32 0.00 0.00 5.19
62 63 7.251321 TGATTTAATTATTGTTGGTGGCCTT 57.749 32.000 3.32 0.00 0.00 4.35
63 64 7.102346 TGATTTAATTATTGTTGGTGGCCTTG 58.898 34.615 3.32 0.00 0.00 3.61
64 65 6.426646 TTTAATTATTGTTGGTGGCCTTGT 57.573 33.333 3.32 0.00 0.00 3.16
65 66 7.540474 TTTAATTATTGTTGGTGGCCTTGTA 57.460 32.000 3.32 0.00 0.00 2.41
66 67 5.400066 AATTATTGTTGGTGGCCTTGTAC 57.600 39.130 3.32 0.00 0.00 2.90
67 68 2.675658 ATTGTTGGTGGCCTTGTACT 57.324 45.000 3.32 0.00 0.00 2.73
68 69 1.975660 TTGTTGGTGGCCTTGTACTC 58.024 50.000 3.32 0.00 0.00 2.59
69 70 0.109723 TGTTGGTGGCCTTGTACTCC 59.890 55.000 3.32 0.00 0.00 3.85
70 71 0.608308 GTTGGTGGCCTTGTACTCCC 60.608 60.000 3.32 0.00 0.00 4.30
71 72 0.770557 TTGGTGGCCTTGTACTCCCT 60.771 55.000 3.32 0.00 0.00 4.20
72 73 1.198759 TGGTGGCCTTGTACTCCCTC 61.199 60.000 3.32 0.00 0.00 4.30
73 74 0.910088 GGTGGCCTTGTACTCCCTCT 60.910 60.000 3.32 0.00 0.00 3.69
74 75 0.250513 GTGGCCTTGTACTCCCTCTG 59.749 60.000 3.32 0.00 0.00 3.35
75 76 0.178903 TGGCCTTGTACTCCCTCTGT 60.179 55.000 3.32 0.00 0.00 3.41
76 77 0.537653 GGCCTTGTACTCCCTCTGTC 59.462 60.000 0.00 0.00 0.00 3.51
77 78 1.267121 GCCTTGTACTCCCTCTGTCA 58.733 55.000 0.00 0.00 0.00 3.58
78 79 1.066787 GCCTTGTACTCCCTCTGTCAC 60.067 57.143 0.00 0.00 0.00 3.67
79 80 2.248248 CCTTGTACTCCCTCTGTCACA 58.752 52.381 0.00 0.00 0.00 3.58
80 81 2.232452 CCTTGTACTCCCTCTGTCACAG 59.768 54.545 0.00 0.00 0.00 3.66
81 82 2.677542 TGTACTCCCTCTGTCACAGT 57.322 50.000 4.28 0.00 32.61 3.55
82 83 2.958818 TGTACTCCCTCTGTCACAGTT 58.041 47.619 4.28 0.00 32.61 3.16
83 84 3.305720 TGTACTCCCTCTGTCACAGTTT 58.694 45.455 4.28 0.00 32.61 2.66
84 85 4.476297 TGTACTCCCTCTGTCACAGTTTA 58.524 43.478 4.28 0.00 32.61 2.01
85 86 4.523173 TGTACTCCCTCTGTCACAGTTTAG 59.477 45.833 4.28 1.54 32.61 1.85
86 87 3.845860 ACTCCCTCTGTCACAGTTTAGA 58.154 45.455 4.28 0.00 32.61 2.10
87 88 4.223953 ACTCCCTCTGTCACAGTTTAGAA 58.776 43.478 4.28 0.00 32.61 2.10
88 89 4.282195 ACTCCCTCTGTCACAGTTTAGAAG 59.718 45.833 4.28 0.00 32.61 2.85
89 90 3.578716 TCCCTCTGTCACAGTTTAGAAGG 59.421 47.826 4.28 2.74 32.61 3.46
90 91 3.330267 CCTCTGTCACAGTTTAGAAGGC 58.670 50.000 4.28 0.00 32.61 4.35
91 92 3.244215 CCTCTGTCACAGTTTAGAAGGCA 60.244 47.826 4.28 0.00 32.61 4.75
92 93 3.728845 TCTGTCACAGTTTAGAAGGCAC 58.271 45.455 4.28 0.00 32.61 5.01
93 94 3.133901 TCTGTCACAGTTTAGAAGGCACA 59.866 43.478 4.28 0.00 32.61 4.57
94 95 4.067896 CTGTCACAGTTTAGAAGGCACAT 58.932 43.478 0.00 0.00 0.00 3.21
95 96 4.460263 TGTCACAGTTTAGAAGGCACATT 58.540 39.130 0.00 0.00 0.00 2.71
96 97 4.887071 TGTCACAGTTTAGAAGGCACATTT 59.113 37.500 0.00 0.00 0.00 2.32
97 98 6.058833 TGTCACAGTTTAGAAGGCACATTTA 58.941 36.000 0.00 0.00 0.00 1.40
98 99 6.544197 TGTCACAGTTTAGAAGGCACATTTAA 59.456 34.615 0.00 0.00 0.00 1.52
99 100 7.067615 TGTCACAGTTTAGAAGGCACATTTAAA 59.932 33.333 0.00 0.00 0.00 1.52
100 101 8.082242 GTCACAGTTTAGAAGGCACATTTAAAT 58.918 33.333 0.00 0.00 0.00 1.40
101 102 8.637986 TCACAGTTTAGAAGGCACATTTAAATT 58.362 29.630 0.00 0.00 0.00 1.82
102 103 9.260002 CACAGTTTAGAAGGCACATTTAAATTT 57.740 29.630 0.00 0.00 0.00 1.82
103 104 9.260002 ACAGTTTAGAAGGCACATTTAAATTTG 57.740 29.630 9.53 9.53 0.00 2.32
104 105 8.223100 CAGTTTAGAAGGCACATTTAAATTTGC 58.777 33.333 24.68 24.68 40.44 3.68
105 106 6.942886 TTAGAAGGCACATTTAAATTTGCG 57.057 33.333 25.29 7.31 41.70 4.85
106 107 4.881920 AGAAGGCACATTTAAATTTGCGT 58.118 34.783 25.29 23.84 41.70 5.24
107 108 4.685628 AGAAGGCACATTTAAATTTGCGTG 59.314 37.500 26.37 18.64 41.70 5.34
108 109 2.736192 AGGCACATTTAAATTTGCGTGC 59.264 40.909 25.54 24.37 46.85 5.34
109 110 2.745422 GCACATTTAAATTTGCGTGCG 58.255 42.857 20.23 0.77 40.16 5.34
110 111 2.154772 GCACATTTAAATTTGCGTGCGT 59.845 40.909 20.23 1.35 40.16 5.24
111 112 3.362499 GCACATTTAAATTTGCGTGCGTT 60.362 39.130 20.23 0.00 40.16 4.84
112 113 4.756444 CACATTTAAATTTGCGTGCGTTT 58.244 34.783 0.00 0.00 0.00 3.60
113 114 4.832829 CACATTTAAATTTGCGTGCGTTTC 59.167 37.500 0.00 0.00 0.00 2.78
114 115 4.504461 ACATTTAAATTTGCGTGCGTTTCA 59.496 33.333 0.00 0.00 0.00 2.69
115 116 4.424476 TTTAAATTTGCGTGCGTTTCAC 57.576 36.364 0.00 0.00 42.23 3.18
116 117 1.914634 AAATTTGCGTGCGTTTCACA 58.085 40.000 0.00 0.00 45.92 3.58
117 118 1.914634 AATTTGCGTGCGTTTCACAA 58.085 40.000 0.00 0.00 45.92 3.33
118 119 2.132740 ATTTGCGTGCGTTTCACAAT 57.867 40.000 0.00 0.00 45.92 2.71
119 120 2.757686 TTTGCGTGCGTTTCACAATA 57.242 40.000 0.00 0.00 45.92 1.90
120 121 2.308347 TTGCGTGCGTTTCACAATAG 57.692 45.000 0.00 0.00 45.92 1.73
121 122 1.503294 TGCGTGCGTTTCACAATAGA 58.497 45.000 0.00 0.00 45.92 1.98
122 123 1.193650 TGCGTGCGTTTCACAATAGAC 59.806 47.619 0.00 0.00 45.92 2.59
123 124 1.193650 GCGTGCGTTTCACAATAGACA 59.806 47.619 0.00 0.00 45.92 3.41
124 125 2.349060 GCGTGCGTTTCACAATAGACAA 60.349 45.455 0.00 0.00 45.92 3.18
125 126 3.469629 CGTGCGTTTCACAATAGACAAG 58.530 45.455 0.00 0.00 45.92 3.16
126 127 3.664276 CGTGCGTTTCACAATAGACAAGG 60.664 47.826 0.00 0.00 45.92 3.61
127 128 3.250040 GTGCGTTTCACAATAGACAAGGT 59.750 43.478 0.00 0.00 44.98 3.50
128 129 3.880490 TGCGTTTCACAATAGACAAGGTT 59.120 39.130 0.00 0.00 0.00 3.50
129 130 4.336993 TGCGTTTCACAATAGACAAGGTTT 59.663 37.500 0.00 0.00 0.00 3.27
130 131 5.527951 TGCGTTTCACAATAGACAAGGTTTA 59.472 36.000 0.00 0.00 0.00 2.01
131 132 6.077838 GCGTTTCACAATAGACAAGGTTTAG 58.922 40.000 0.00 0.00 0.00 1.85
132 133 6.599437 CGTTTCACAATAGACAAGGTTTAGG 58.401 40.000 0.00 0.00 0.00 2.69
133 134 6.348213 CGTTTCACAATAGACAAGGTTTAGGG 60.348 42.308 0.00 0.00 0.00 3.53
134 135 4.585879 TCACAATAGACAAGGTTTAGGGC 58.414 43.478 0.00 0.00 0.00 5.19
135 136 3.374058 CACAATAGACAAGGTTTAGGGCG 59.626 47.826 0.00 0.00 0.00 6.13
136 137 2.327200 ATAGACAAGGTTTAGGGCGC 57.673 50.000 0.00 0.00 0.00 6.53
137 138 0.978151 TAGACAAGGTTTAGGGCGCA 59.022 50.000 10.83 0.00 0.00 6.09
138 139 0.328258 AGACAAGGTTTAGGGCGCAT 59.672 50.000 10.83 0.00 0.00 4.73
139 140 1.173913 GACAAGGTTTAGGGCGCATT 58.826 50.000 10.83 0.00 0.00 3.56
140 141 0.887933 ACAAGGTTTAGGGCGCATTG 59.112 50.000 10.83 3.20 0.00 2.82
141 142 0.887933 CAAGGTTTAGGGCGCATTGT 59.112 50.000 10.83 0.00 0.00 2.71
142 143 2.088423 CAAGGTTTAGGGCGCATTGTA 58.912 47.619 10.83 0.00 0.00 2.41
143 144 2.687935 CAAGGTTTAGGGCGCATTGTAT 59.312 45.455 10.83 0.00 0.00 2.29
144 145 3.012934 AGGTTTAGGGCGCATTGTATT 57.987 42.857 10.83 0.00 0.00 1.89
145 146 3.361786 AGGTTTAGGGCGCATTGTATTT 58.638 40.909 10.83 0.00 0.00 1.40
146 147 4.528920 AGGTTTAGGGCGCATTGTATTTA 58.471 39.130 10.83 0.00 0.00 1.40
147 148 5.137551 AGGTTTAGGGCGCATTGTATTTAT 58.862 37.500 10.83 0.00 0.00 1.40
148 149 5.596772 AGGTTTAGGGCGCATTGTATTTATT 59.403 36.000 10.83 0.00 0.00 1.40
149 150 6.097696 AGGTTTAGGGCGCATTGTATTTATTT 59.902 34.615 10.83 0.00 0.00 1.40
150 151 6.419710 GGTTTAGGGCGCATTGTATTTATTTC 59.580 38.462 10.83 0.00 0.00 2.17
151 152 6.952773 TTAGGGCGCATTGTATTTATTTCT 57.047 33.333 10.83 0.00 0.00 2.52
152 153 8.347035 GTTTAGGGCGCATTGTATTTATTTCTA 58.653 33.333 10.83 0.00 0.00 2.10
153 154 6.560253 AGGGCGCATTGTATTTATTTCTAG 57.440 37.500 10.83 0.00 0.00 2.43
154 155 6.062095 AGGGCGCATTGTATTTATTTCTAGT 58.938 36.000 10.83 0.00 0.00 2.57
155 156 7.221450 AGGGCGCATTGTATTTATTTCTAGTA 58.779 34.615 10.83 0.00 0.00 1.82
156 157 7.387948 AGGGCGCATTGTATTTATTTCTAGTAG 59.612 37.037 10.83 0.00 0.00 2.57
157 158 7.015877 GGCGCATTGTATTTATTTCTAGTAGC 58.984 38.462 10.83 0.00 0.00 3.58
158 159 7.095187 GGCGCATTGTATTTATTTCTAGTAGCT 60.095 37.037 10.83 0.00 0.00 3.32
159 160 8.922676 GCGCATTGTATTTATTTCTAGTAGCTA 58.077 33.333 0.30 0.00 0.00 3.32
172 173 9.790344 ATTTCTAGTAGCTAATTAGTACTCCGA 57.210 33.333 21.10 17.46 0.00 4.55
173 174 9.790344 TTTCTAGTAGCTAATTAGTACTCCGAT 57.210 33.333 21.10 8.68 0.00 4.18
229 230 5.359194 TTTTTAGCCCATTTCACAACCAA 57.641 34.783 0.00 0.00 0.00 3.67
230 231 5.559148 TTTTAGCCCATTTCACAACCAAT 57.441 34.783 0.00 0.00 0.00 3.16
231 232 6.672266 TTTTAGCCCATTTCACAACCAATA 57.328 33.333 0.00 0.00 0.00 1.90
232 233 5.913137 TTAGCCCATTTCACAACCAATAG 57.087 39.130 0.00 0.00 0.00 1.73
233 234 4.046286 AGCCCATTTCACAACCAATAGA 57.954 40.909 0.00 0.00 0.00 1.98
234 235 4.613437 AGCCCATTTCACAACCAATAGAT 58.387 39.130 0.00 0.00 0.00 1.98
235 236 5.765510 AGCCCATTTCACAACCAATAGATA 58.234 37.500 0.00 0.00 0.00 1.98
236 237 6.194235 AGCCCATTTCACAACCAATAGATAA 58.806 36.000 0.00 0.00 0.00 1.75
237 238 6.096846 AGCCCATTTCACAACCAATAGATAAC 59.903 38.462 0.00 0.00 0.00 1.89
238 239 6.682861 GCCCATTTCACAACCAATAGATAACC 60.683 42.308 0.00 0.00 0.00 2.85
239 240 6.379703 CCCATTTCACAACCAATAGATAACCA 59.620 38.462 0.00 0.00 0.00 3.67
240 241 7.257722 CCATTTCACAACCAATAGATAACCAC 58.742 38.462 0.00 0.00 0.00 4.16
241 242 6.827586 TTTCACAACCAATAGATAACCACC 57.172 37.500 0.00 0.00 0.00 4.61
242 243 5.772393 TCACAACCAATAGATAACCACCT 57.228 39.130 0.00 0.00 0.00 4.00
243 244 6.877668 TCACAACCAATAGATAACCACCTA 57.122 37.500 0.00 0.00 0.00 3.08
244 245 6.884832 TCACAACCAATAGATAACCACCTAG 58.115 40.000 0.00 0.00 0.00 3.02
245 246 6.055588 CACAACCAATAGATAACCACCTAGG 58.944 44.000 7.41 7.41 45.67 3.02
260 261 4.944317 CCACCTAGGTTCAAGAGAATTTCC 59.056 45.833 13.15 0.00 35.92 3.13
261 262 5.514834 CCACCTAGGTTCAAGAGAATTTCCA 60.515 44.000 13.15 0.00 35.92 3.53
262 263 6.003950 CACCTAGGTTCAAGAGAATTTCCAA 58.996 40.000 13.15 0.00 35.92 3.53
263 264 6.490040 CACCTAGGTTCAAGAGAATTTCCAAA 59.510 38.462 13.15 0.00 35.92 3.28
264 265 6.490381 ACCTAGGTTCAAGAGAATTTCCAAAC 59.510 38.462 9.21 0.00 35.92 2.93
265 266 5.438761 AGGTTCAAGAGAATTTCCAAACG 57.561 39.130 0.00 0.00 35.92 3.60
266 267 3.981416 GGTTCAAGAGAATTTCCAAACGC 59.019 43.478 0.00 0.00 35.92 4.84
267 268 3.536158 TCAAGAGAATTTCCAAACGCG 57.464 42.857 3.53 3.53 0.00 6.01
268 269 1.978782 CAAGAGAATTTCCAAACGCGC 59.021 47.619 5.73 0.00 0.00 6.86
269 270 0.521735 AGAGAATTTCCAAACGCGCC 59.478 50.000 5.73 0.00 0.00 6.53
270 271 0.521735 GAGAATTTCCAAACGCGCCT 59.478 50.000 5.73 0.00 0.00 5.52
271 272 0.958822 AGAATTTCCAAACGCGCCTT 59.041 45.000 5.73 0.00 0.00 4.35
272 273 1.068541 AGAATTTCCAAACGCGCCTTC 60.069 47.619 5.73 0.00 0.00 3.46
273 274 0.958822 AATTTCCAAACGCGCCTTCT 59.041 45.000 5.73 0.00 0.00 2.85
274 275 1.816074 ATTTCCAAACGCGCCTTCTA 58.184 45.000 5.73 0.00 0.00 2.10
275 276 1.595466 TTTCCAAACGCGCCTTCTAA 58.405 45.000 5.73 0.00 0.00 2.10
276 277 1.595466 TTCCAAACGCGCCTTCTAAA 58.405 45.000 5.73 0.00 0.00 1.85
277 278 0.869730 TCCAAACGCGCCTTCTAAAC 59.130 50.000 5.73 0.00 0.00 2.01
278 279 0.109919 CCAAACGCGCCTTCTAAACC 60.110 55.000 5.73 0.00 0.00 3.27
279 280 0.452122 CAAACGCGCCTTCTAAACCG 60.452 55.000 5.73 0.00 0.00 4.44
280 281 0.881600 AAACGCGCCTTCTAAACCGT 60.882 50.000 5.73 0.00 0.00 4.83
281 282 1.562575 AACGCGCCTTCTAAACCGTG 61.563 55.000 5.73 0.00 37.25 4.94
282 283 1.735198 CGCGCCTTCTAAACCGTGA 60.735 57.895 0.00 0.00 33.47 4.35
283 284 1.785951 GCGCCTTCTAAACCGTGAC 59.214 57.895 0.00 0.00 0.00 3.67
284 285 1.952266 GCGCCTTCTAAACCGTGACG 61.952 60.000 0.00 0.00 0.00 4.35
296 297 2.789842 CGTGACGGAGGGAGTATGA 58.210 57.895 0.00 0.00 0.00 2.15
297 298 1.100510 CGTGACGGAGGGAGTATGAA 58.899 55.000 0.00 0.00 0.00 2.57
298 299 1.681793 CGTGACGGAGGGAGTATGAAT 59.318 52.381 0.00 0.00 0.00 2.57
299 300 2.543861 CGTGACGGAGGGAGTATGAATG 60.544 54.545 0.00 0.00 0.00 2.67
300 301 2.431057 GTGACGGAGGGAGTATGAATGT 59.569 50.000 0.00 0.00 0.00 2.71
301 302 2.430694 TGACGGAGGGAGTATGAATGTG 59.569 50.000 0.00 0.00 0.00 3.21
302 303 2.431057 GACGGAGGGAGTATGAATGTGT 59.569 50.000 0.00 0.00 0.00 3.72
303 304 3.635373 GACGGAGGGAGTATGAATGTGTA 59.365 47.826 0.00 0.00 0.00 2.90
304 305 4.028131 ACGGAGGGAGTATGAATGTGTAA 58.972 43.478 0.00 0.00 0.00 2.41
305 306 4.654262 ACGGAGGGAGTATGAATGTGTAAT 59.346 41.667 0.00 0.00 0.00 1.89
306 307 4.991056 CGGAGGGAGTATGAATGTGTAATG 59.009 45.833 0.00 0.00 0.00 1.90
307 308 5.453339 CGGAGGGAGTATGAATGTGTAATGT 60.453 44.000 0.00 0.00 0.00 2.71
308 309 6.239204 CGGAGGGAGTATGAATGTGTAATGTA 60.239 42.308 0.00 0.00 0.00 2.29
309 310 6.929606 GGAGGGAGTATGAATGTGTAATGTAC 59.070 42.308 0.00 0.00 0.00 2.90
310 311 7.202011 GGAGGGAGTATGAATGTGTAATGTACT 60.202 40.741 0.00 0.00 0.00 2.73
311 312 8.777578 AGGGAGTATGAATGTGTAATGTACTA 57.222 34.615 0.00 0.00 0.00 1.82
312 313 9.381038 AGGGAGTATGAATGTGTAATGTACTAT 57.619 33.333 0.00 0.00 0.00 2.12
313 314 9.640963 GGGAGTATGAATGTGTAATGTACTATC 57.359 37.037 0.00 0.00 0.00 2.08
320 321 9.719355 TGAATGTGTAATGTACTATCAAACTGT 57.281 29.630 0.00 0.00 0.00 3.55
321 322 9.973246 GAATGTGTAATGTACTATCAAACTGTG 57.027 33.333 0.00 0.00 0.00 3.66
322 323 9.719355 AATGTGTAATGTACTATCAAACTGTGA 57.281 29.630 0.00 0.00 41.67 3.58
323 324 8.528917 TGTGTAATGTACTATCAAACTGTGAC 57.471 34.615 0.00 0.00 39.72 3.67
324 325 7.601130 TGTGTAATGTACTATCAAACTGTGACC 59.399 37.037 0.00 0.00 39.72 4.02
325 326 7.601130 GTGTAATGTACTATCAAACTGTGACCA 59.399 37.037 0.00 0.00 39.72 4.02
326 327 8.318412 TGTAATGTACTATCAAACTGTGACCAT 58.682 33.333 0.00 0.00 39.72 3.55
327 328 9.162764 GTAATGTACTATCAAACTGTGACCATT 57.837 33.333 0.00 0.00 39.72 3.16
329 330 9.733556 AATGTACTATCAAACTGTGACCATTAA 57.266 29.630 0.00 0.00 39.72 1.40
330 331 9.733556 ATGTACTATCAAACTGTGACCATTAAA 57.266 29.630 0.00 0.00 39.72 1.52
331 332 9.562408 TGTACTATCAAACTGTGACCATTAAAA 57.438 29.630 0.00 0.00 39.72 1.52
355 356 9.763465 AAAAATACAAAAATCATACCGTACGAG 57.237 29.630 18.76 9.56 0.00 4.18
356 357 7.473027 AATACAAAAATCATACCGTACGAGG 57.527 36.000 18.76 3.00 37.30 4.63
357 358 5.075858 ACAAAAATCATACCGTACGAGGA 57.924 39.130 18.76 5.18 34.73 3.71
358 359 5.481105 ACAAAAATCATACCGTACGAGGAA 58.519 37.500 18.76 0.00 34.73 3.36
359 360 5.349543 ACAAAAATCATACCGTACGAGGAAC 59.650 40.000 18.76 0.00 34.73 3.62
361 362 6.455360 AAAATCATACCGTACGAGGAACTA 57.545 37.500 18.76 0.00 41.55 2.24
362 363 6.645790 AAATCATACCGTACGAGGAACTAT 57.354 37.500 18.76 0.00 41.55 2.12
363 364 5.624344 ATCATACCGTACGAGGAACTATG 57.376 43.478 18.76 10.33 41.55 2.23
364 365 4.707105 TCATACCGTACGAGGAACTATGA 58.293 43.478 18.76 12.20 41.55 2.15
365 366 4.753610 TCATACCGTACGAGGAACTATGAG 59.246 45.833 18.76 0.00 41.55 2.90
366 367 3.272574 ACCGTACGAGGAACTATGAGA 57.727 47.619 18.76 0.00 41.55 3.27
367 368 2.941720 ACCGTACGAGGAACTATGAGAC 59.058 50.000 18.76 0.00 41.55 3.36
368 369 2.290093 CCGTACGAGGAACTATGAGACC 59.710 54.545 18.76 0.00 41.55 3.85
369 370 3.204526 CGTACGAGGAACTATGAGACCT 58.795 50.000 10.44 0.00 41.55 3.85
370 371 3.002451 CGTACGAGGAACTATGAGACCTG 59.998 52.174 10.44 0.00 41.55 4.00
371 372 3.367646 ACGAGGAACTATGAGACCTGA 57.632 47.619 0.00 0.00 41.55 3.86
372 373 3.283751 ACGAGGAACTATGAGACCTGAG 58.716 50.000 0.00 0.00 41.55 3.35
373 374 2.621055 CGAGGAACTATGAGACCTGAGG 59.379 54.545 0.00 0.00 41.55 3.86
374 375 2.364002 GAGGAACTATGAGACCTGAGGC 59.636 54.545 0.00 0.00 41.55 4.70
375 376 1.414550 GGAACTATGAGACCTGAGGCC 59.585 57.143 0.00 0.00 0.00 5.19
376 377 2.111384 GAACTATGAGACCTGAGGCCA 58.889 52.381 5.01 0.00 0.00 5.36
377 378 2.254152 ACTATGAGACCTGAGGCCAA 57.746 50.000 5.01 0.00 0.00 4.52
378 379 1.834263 ACTATGAGACCTGAGGCCAAC 59.166 52.381 5.01 0.00 0.00 3.77
379 380 2.114616 CTATGAGACCTGAGGCCAACT 58.885 52.381 5.01 0.00 0.00 3.16
380 381 2.254152 ATGAGACCTGAGGCCAACTA 57.746 50.000 5.01 0.00 0.00 2.24
381 382 1.267121 TGAGACCTGAGGCCAACTAC 58.733 55.000 5.01 0.00 0.00 2.73
382 383 1.267121 GAGACCTGAGGCCAACTACA 58.733 55.000 5.01 0.00 0.00 2.74
383 384 1.205893 GAGACCTGAGGCCAACTACAG 59.794 57.143 5.01 6.24 0.00 2.74
384 385 0.977395 GACCTGAGGCCAACTACAGT 59.023 55.000 5.01 0.00 0.00 3.55
385 386 0.687354 ACCTGAGGCCAACTACAGTG 59.313 55.000 5.01 3.74 0.00 3.66
386 387 0.687354 CCTGAGGCCAACTACAGTGT 59.313 55.000 5.01 0.00 0.00 3.55
387 388 1.899814 CCTGAGGCCAACTACAGTGTA 59.100 52.381 5.01 2.36 0.00 2.90
388 389 2.501723 CCTGAGGCCAACTACAGTGTAT 59.498 50.000 5.01 0.00 0.00 2.29
389 390 3.525537 CTGAGGCCAACTACAGTGTATG 58.474 50.000 5.01 0.01 0.00 2.39
390 391 3.169908 TGAGGCCAACTACAGTGTATGA 58.830 45.455 5.01 0.00 0.00 2.15
391 392 3.056107 TGAGGCCAACTACAGTGTATGAC 60.056 47.826 5.01 0.00 0.00 3.06
392 393 2.236395 AGGCCAACTACAGTGTATGACC 59.764 50.000 5.01 2.32 0.00 4.02
393 394 2.629051 GCCAACTACAGTGTATGACCC 58.371 52.381 2.82 0.00 0.00 4.46
394 395 2.679930 GCCAACTACAGTGTATGACCCC 60.680 54.545 2.82 0.00 0.00 4.95
395 396 2.418197 CCAACTACAGTGTATGACCCCG 60.418 54.545 2.82 0.00 0.00 5.73
396 397 2.494471 CAACTACAGTGTATGACCCCGA 59.506 50.000 2.82 0.00 0.00 5.14
397 398 2.097825 ACTACAGTGTATGACCCCGAC 58.902 52.381 2.82 0.00 0.00 4.79
398 399 1.065102 CTACAGTGTATGACCCCGACG 59.935 57.143 2.82 0.00 0.00 5.12
399 400 0.896940 ACAGTGTATGACCCCGACGT 60.897 55.000 0.00 0.00 0.00 4.34
400 401 0.245539 CAGTGTATGACCCCGACGTT 59.754 55.000 0.00 0.00 0.00 3.99
401 402 0.529378 AGTGTATGACCCCGACGTTC 59.471 55.000 0.00 0.00 0.00 3.95
402 403 0.244450 GTGTATGACCCCGACGTTCA 59.756 55.000 0.00 0.00 0.00 3.18
403 404 1.134907 GTGTATGACCCCGACGTTCAT 60.135 52.381 5.13 5.13 0.00 2.57
404 405 1.551430 TGTATGACCCCGACGTTCATT 59.449 47.619 5.09 0.00 0.00 2.57
405 406 2.027929 TGTATGACCCCGACGTTCATTT 60.028 45.455 5.09 0.00 0.00 2.32
406 407 2.194201 ATGACCCCGACGTTCATTTT 57.806 45.000 0.00 0.00 0.00 1.82
407 408 2.835580 TGACCCCGACGTTCATTTTA 57.164 45.000 0.00 0.00 0.00 1.52
408 409 2.415776 TGACCCCGACGTTCATTTTAC 58.584 47.619 0.00 0.00 0.00 2.01
409 410 2.037511 TGACCCCGACGTTCATTTTACT 59.962 45.455 0.00 0.00 0.00 2.24
410 411 3.069289 GACCCCGACGTTCATTTTACTT 58.931 45.455 0.00 0.00 0.00 2.24
411 412 2.809696 ACCCCGACGTTCATTTTACTTG 59.190 45.455 0.00 0.00 0.00 3.16
412 413 3.068560 CCCCGACGTTCATTTTACTTGA 58.931 45.455 0.00 0.00 0.00 3.02
413 414 3.499157 CCCCGACGTTCATTTTACTTGAA 59.501 43.478 0.00 0.00 0.00 2.69
414 415 4.155280 CCCCGACGTTCATTTTACTTGAAT 59.845 41.667 0.00 0.00 35.68 2.57
415 416 5.335348 CCCCGACGTTCATTTTACTTGAATT 60.335 40.000 0.00 0.00 35.68 2.17
416 417 5.793457 CCCGACGTTCATTTTACTTGAATTC 59.207 40.000 0.00 0.00 35.68 2.17
417 418 6.348213 CCCGACGTTCATTTTACTTGAATTCT 60.348 38.462 7.05 0.00 35.68 2.40
418 419 6.519761 CCGACGTTCATTTTACTTGAATTCTG 59.480 38.462 7.05 2.42 35.68 3.02
419 420 7.069569 CGACGTTCATTTTACTTGAATTCTGT 58.930 34.615 7.05 8.25 35.68 3.41
420 421 7.266335 CGACGTTCATTTTACTTGAATTCTGTC 59.734 37.037 7.05 0.00 35.68 3.51
421 422 7.360361 ACGTTCATTTTACTTGAATTCTGTCC 58.640 34.615 7.05 0.00 35.68 4.02
422 423 6.519761 CGTTCATTTTACTTGAATTCTGTCCG 59.480 38.462 7.05 0.00 35.68 4.79
423 424 7.360361 GTTCATTTTACTTGAATTCTGTCCGT 58.640 34.615 7.05 0.00 35.68 4.69
424 425 7.504924 TCATTTTACTTGAATTCTGTCCGTT 57.495 32.000 7.05 0.00 0.00 4.44
425 426 7.581476 TCATTTTACTTGAATTCTGTCCGTTC 58.419 34.615 7.05 0.00 0.00 3.95
426 427 6.928979 TTTTACTTGAATTCTGTCCGTTCA 57.071 33.333 7.05 0.00 0.00 3.18
427 428 7.504924 TTTTACTTGAATTCTGTCCGTTCAT 57.495 32.000 7.05 0.00 32.48 2.57
428 429 7.504924 TTTACTTGAATTCTGTCCGTTCATT 57.495 32.000 7.05 0.00 32.48 2.57
429 430 7.504924 TTACTTGAATTCTGTCCGTTCATTT 57.495 32.000 7.05 0.00 32.48 2.32
430 431 6.391227 ACTTGAATTCTGTCCGTTCATTTT 57.609 33.333 7.05 0.00 32.48 1.82
431 432 7.504924 ACTTGAATTCTGTCCGTTCATTTTA 57.495 32.000 7.05 0.00 32.48 1.52
432 433 7.360361 ACTTGAATTCTGTCCGTTCATTTTAC 58.640 34.615 7.05 0.00 32.48 2.01
433 434 6.869315 TGAATTCTGTCCGTTCATTTTACA 57.131 33.333 7.05 0.00 0.00 2.41
434 435 6.898041 TGAATTCTGTCCGTTCATTTTACAG 58.102 36.000 7.05 0.00 39.10 2.74
435 436 6.485313 TGAATTCTGTCCGTTCATTTTACAGT 59.515 34.615 7.05 0.00 38.88 3.55
436 437 5.666969 TTCTGTCCGTTCATTTTACAGTG 57.333 39.130 0.00 0.00 38.88 3.66
437 438 4.699637 TCTGTCCGTTCATTTTACAGTGT 58.300 39.130 0.00 0.00 38.88 3.55
438 439 5.845103 TCTGTCCGTTCATTTTACAGTGTA 58.155 37.500 0.00 0.00 38.88 2.90
439 440 6.460781 TCTGTCCGTTCATTTTACAGTGTAT 58.539 36.000 3.28 0.00 38.88 2.29
440 441 6.367695 TCTGTCCGTTCATTTTACAGTGTATG 59.632 38.462 3.28 0.80 38.88 2.39
441 442 6.224584 TGTCCGTTCATTTTACAGTGTATGA 58.775 36.000 3.28 3.43 0.00 2.15
442 443 6.367695 TGTCCGTTCATTTTACAGTGTATGAG 59.632 38.462 3.28 0.00 0.00 2.90
443 444 6.588756 GTCCGTTCATTTTACAGTGTATGAGA 59.411 38.462 3.28 0.00 0.00 3.27
444 445 6.588756 TCCGTTCATTTTACAGTGTATGAGAC 59.411 38.462 3.28 6.75 0.00 3.36
445 446 6.183360 CCGTTCATTTTACAGTGTATGAGACC 60.183 42.308 3.28 0.00 0.00 3.85
446 447 6.590292 CGTTCATTTTACAGTGTATGAGACCT 59.410 38.462 3.28 0.00 0.00 3.85
447 448 7.117812 CGTTCATTTTACAGTGTATGAGACCTT 59.882 37.037 3.28 0.00 0.00 3.50
448 449 8.784043 GTTCATTTTACAGTGTATGAGACCTTT 58.216 33.333 3.28 0.00 0.00 3.11
449 450 8.918202 TCATTTTACAGTGTATGAGACCTTTT 57.082 30.769 3.28 0.00 0.00 2.27
450 451 8.999431 TCATTTTACAGTGTATGAGACCTTTTC 58.001 33.333 3.28 0.00 0.00 2.29
451 452 9.003658 CATTTTACAGTGTATGAGACCTTTTCT 57.996 33.333 3.28 0.00 37.23 2.52
454 455 9.706691 TTTACAGTGTATGAGACCTTTTCTAAG 57.293 33.333 3.28 0.00 33.22 2.18
455 456 7.540474 ACAGTGTATGAGACCTTTTCTAAGA 57.460 36.000 0.00 0.00 33.22 2.10
456 457 8.140112 ACAGTGTATGAGACCTTTTCTAAGAT 57.860 34.615 0.00 0.00 33.22 2.40
457 458 8.037758 ACAGTGTATGAGACCTTTTCTAAGATG 58.962 37.037 0.00 0.00 33.22 2.90
458 459 7.010923 CAGTGTATGAGACCTTTTCTAAGATGC 59.989 40.741 0.00 0.00 33.22 3.91
459 460 6.818644 GTGTATGAGACCTTTTCTAAGATGCA 59.181 38.462 0.00 0.00 33.22 3.96
460 461 7.497249 GTGTATGAGACCTTTTCTAAGATGCAT 59.503 37.037 0.00 0.00 33.22 3.96
461 462 7.712639 TGTATGAGACCTTTTCTAAGATGCATC 59.287 37.037 19.37 19.37 33.22 3.91
462 463 5.111989 TGAGACCTTTTCTAAGATGCATCG 58.888 41.667 20.67 7.37 33.22 3.84
463 464 4.446371 AGACCTTTTCTAAGATGCATCGG 58.554 43.478 20.67 14.95 32.92 4.18
464 465 2.945668 ACCTTTTCTAAGATGCATCGGC 59.054 45.455 20.67 0.00 35.36 5.54
465 466 3.209410 CCTTTTCTAAGATGCATCGGCT 58.791 45.455 20.67 11.90 35.65 5.52
466 467 3.003068 CCTTTTCTAAGATGCATCGGCTG 59.997 47.826 20.67 12.28 35.65 4.85
467 468 2.988010 TTCTAAGATGCATCGGCTGT 57.012 45.000 20.67 7.88 41.91 4.40
468 469 2.229675 TCTAAGATGCATCGGCTGTG 57.770 50.000 20.67 9.37 41.91 3.66
469 470 0.585357 CTAAGATGCATCGGCTGTGC 59.415 55.000 20.67 11.69 42.81 4.57
473 474 2.743538 TGCATCGGCTGTGCACTC 60.744 61.111 19.41 9.69 46.76 3.51
474 475 2.743538 GCATCGGCTGTGCACTCA 60.744 61.111 19.41 0.00 42.08 3.41
475 476 2.327343 GCATCGGCTGTGCACTCAA 61.327 57.895 19.41 0.00 42.08 3.02
476 477 1.499056 CATCGGCTGTGCACTCAAC 59.501 57.895 19.41 4.45 0.00 3.18
477 478 2.029288 ATCGGCTGTGCACTCAACG 61.029 57.895 19.41 16.43 0.00 4.10
478 479 4.374702 CGGCTGTGCACTCAACGC 62.375 66.667 19.41 11.96 0.00 4.84
479 480 4.374702 GGCTGTGCACTCAACGCG 62.375 66.667 19.41 3.53 0.00 6.01
481 482 4.707840 CTGTGCACTCAACGCGCG 62.708 66.667 30.96 30.96 42.82 6.86
500 501 2.563471 GGACGCATCTCCGGTATATC 57.437 55.000 0.00 0.00 0.00 1.63
501 502 1.134560 GGACGCATCTCCGGTATATCC 59.865 57.143 0.00 1.69 0.00 2.59
514 515 4.335400 GGTATATCCGTTTTACCCCGAA 57.665 45.455 0.00 0.00 31.12 4.30
515 516 4.898320 GGTATATCCGTTTTACCCCGAAT 58.102 43.478 0.00 0.00 31.12 3.34
516 517 4.692155 GGTATATCCGTTTTACCCCGAATG 59.308 45.833 0.00 0.00 31.12 2.67
517 518 4.693042 ATATCCGTTTTACCCCGAATGA 57.307 40.909 0.00 0.00 0.00 2.57
518 519 2.855209 TCCGTTTTACCCCGAATGAA 57.145 45.000 0.00 0.00 0.00 2.57
519 520 2.425539 TCCGTTTTACCCCGAATGAAC 58.574 47.619 0.00 0.00 0.00 3.18
520 521 1.129064 CCGTTTTACCCCGAATGAACG 59.871 52.381 0.00 0.00 39.43 3.95
521 522 1.464521 CGTTTTACCCCGAATGAACGC 60.465 52.381 0.00 0.00 34.41 4.84
522 523 1.536331 GTTTTACCCCGAATGAACGCA 59.464 47.619 0.00 0.00 0.00 5.24
523 524 1.158434 TTTACCCCGAATGAACGCAC 58.842 50.000 0.00 0.00 0.00 5.34
524 525 0.674269 TTACCCCGAATGAACGCACC 60.674 55.000 0.00 0.00 0.00 5.01
525 526 2.524951 TACCCCGAATGAACGCACCC 62.525 60.000 0.00 0.00 0.00 4.61
526 527 3.496131 CCCGAATGAACGCACCCG 61.496 66.667 0.00 0.00 41.14 5.28
527 528 3.496131 CCGAATGAACGCACCCGG 61.496 66.667 0.00 0.00 39.22 5.73
528 529 2.433491 CGAATGAACGCACCCGGA 60.433 61.111 0.73 0.00 39.22 5.14
529 530 2.736682 CGAATGAACGCACCCGGAC 61.737 63.158 0.73 0.00 39.22 4.79
530 531 1.669760 GAATGAACGCACCCGGACA 60.670 57.895 0.73 0.00 39.22 4.02
531 532 1.635663 GAATGAACGCACCCGGACAG 61.636 60.000 0.73 0.00 39.22 3.51
532 533 3.605749 ATGAACGCACCCGGACAGG 62.606 63.158 0.73 0.00 39.22 4.00
559 560 4.308458 TGGAGTTGGCGTGGGACG 62.308 66.667 0.00 0.00 45.88 4.79
632 637 2.655577 CGTTCGGATGCGCTTTATTACG 60.656 50.000 9.73 8.54 0.00 3.18
761 788 5.122869 CCGCCATTATTATTCCAGATGACTG 59.877 44.000 0.00 0.00 43.12 3.51
810 841 3.679824 ACGGTCGGAAAGAAGAGAATT 57.320 42.857 0.00 0.00 0.00 2.17
884 926 1.809567 CGCAGAAAAGCCAAAGCCCT 61.810 55.000 0.00 0.00 41.25 5.19
886 928 0.605083 CAGAAAAGCCAAAGCCCTCC 59.395 55.000 0.00 0.00 41.25 4.30
904 946 1.185618 CCCCGGAGAAGACACACAGA 61.186 60.000 0.73 0.00 0.00 3.41
956 1027 4.825679 CACCCCTCCTCCCTCCCC 62.826 77.778 0.00 0.00 0.00 4.81
974 1045 3.461773 CTCTCCCGCGGACCACAT 61.462 66.667 30.73 0.00 0.00 3.21
975 1046 3.432051 CTCTCCCGCGGACCACATC 62.432 68.421 30.73 0.00 0.00 3.06
976 1047 4.873129 CTCCCGCGGACCACATCG 62.873 72.222 30.73 7.15 0.00 3.84
978 1049 4.873129 CCCGCGGACCACATCGAG 62.873 72.222 30.73 0.44 0.00 4.04
979 1050 3.822192 CCGCGGACCACATCGAGA 61.822 66.667 24.07 0.00 0.00 4.04
980 1051 2.180769 CGCGGACCACATCGAGAA 59.819 61.111 0.00 0.00 0.00 2.87
981 1052 2.158959 CGCGGACCACATCGAGAAC 61.159 63.158 0.00 0.00 0.00 3.01
982 1053 1.810030 GCGGACCACATCGAGAACC 60.810 63.158 0.00 0.00 0.00 3.62
983 1054 1.589630 CGGACCACATCGAGAACCA 59.410 57.895 0.00 0.00 0.00 3.67
984 1055 0.736325 CGGACCACATCGAGAACCAC 60.736 60.000 0.00 0.00 0.00 4.16
985 1056 0.320374 GGACCACATCGAGAACCACA 59.680 55.000 0.00 0.00 0.00 4.17
986 1057 1.673033 GGACCACATCGAGAACCACAG 60.673 57.143 0.00 0.00 0.00 3.66
987 1058 0.320771 ACCACATCGAGAACCACAGC 60.321 55.000 0.00 0.00 0.00 4.40
1081 1157 0.105593 CCCATGGACATCGACTGGAG 59.894 60.000 15.22 0.00 0.00 3.86
1254 1332 4.840005 CCGCTCCCGCTTCCTTCC 62.840 72.222 0.00 0.00 0.00 3.46
1256 1334 4.491409 GCTCCCGCTTCCTTCCCC 62.491 72.222 0.00 0.00 0.00 4.81
1275 1353 4.587189 GCGCCCGCGTCTCCTATT 62.587 66.667 11.18 0.00 42.09 1.73
1276 1354 2.658593 CGCCCGCGTCTCCTATTG 60.659 66.667 4.92 0.00 34.35 1.90
1277 1355 2.967615 GCCCGCGTCTCCTATTGC 60.968 66.667 4.92 0.00 0.00 3.56
1278 1356 2.815308 CCCGCGTCTCCTATTGCT 59.185 61.111 4.92 0.00 0.00 3.91
1279 1357 1.144057 CCCGCGTCTCCTATTGCTT 59.856 57.895 4.92 0.00 0.00 3.91
1280 1358 1.154205 CCCGCGTCTCCTATTGCTTG 61.154 60.000 4.92 0.00 0.00 4.01
1285 1363 1.398390 CGTCTCCTATTGCTTGGTTGC 59.602 52.381 0.00 0.00 0.00 4.17
1289 1367 1.106285 CCTATTGCTTGGTTGCTCCC 58.894 55.000 0.00 0.00 34.77 4.30
1290 1368 1.106285 CTATTGCTTGGTTGCTCCCC 58.894 55.000 0.00 0.00 34.77 4.81
1291 1369 0.704076 TATTGCTTGGTTGCTCCCCT 59.296 50.000 0.00 0.00 34.77 4.79
1292 1370 0.613012 ATTGCTTGGTTGCTCCCCTC 60.613 55.000 0.00 0.00 34.77 4.30
1293 1371 1.719063 TTGCTTGGTTGCTCCCCTCT 61.719 55.000 0.00 0.00 34.77 3.69
1300 1378 1.002274 TTGCTCCCCTCTCTCTCCC 59.998 63.158 0.00 0.00 0.00 4.30
1317 1395 2.190843 CGCGAGGAGAGGAGAGGA 59.809 66.667 0.00 0.00 0.00 3.71
1318 1396 1.891919 CGCGAGGAGAGGAGAGGAG 60.892 68.421 0.00 0.00 0.00 3.69
1319 1397 1.529796 GCGAGGAGAGGAGAGGAGA 59.470 63.158 0.00 0.00 0.00 3.71
1320 1398 0.535102 GCGAGGAGAGGAGAGGAGAG 60.535 65.000 0.00 0.00 0.00 3.20
1321 1399 0.108585 CGAGGAGAGGAGAGGAGAGG 59.891 65.000 0.00 0.00 0.00 3.69
1322 1400 1.518367 GAGGAGAGGAGAGGAGAGGA 58.482 60.000 0.00 0.00 0.00 3.71
1323 1401 2.065799 GAGGAGAGGAGAGGAGAGGAT 58.934 57.143 0.00 0.00 0.00 3.24
1324 1402 2.040412 GAGGAGAGGAGAGGAGAGGATC 59.960 59.091 0.00 0.00 0.00 3.36
1325 1403 1.271379 GGAGAGGAGAGGAGAGGATCG 60.271 61.905 0.00 0.00 42.67 3.69
1326 1404 1.697432 GAGAGGAGAGGAGAGGATCGA 59.303 57.143 0.00 0.00 42.67 3.59
1327 1405 1.420138 AGAGGAGAGGAGAGGATCGAC 59.580 57.143 0.00 0.00 42.67 4.20
1328 1406 1.142060 GAGGAGAGGAGAGGATCGACA 59.858 57.143 0.00 0.00 42.67 4.35
1329 1407 1.133915 AGGAGAGGAGAGGATCGACAC 60.134 57.143 0.00 0.00 42.67 3.67
1330 1408 1.408961 GGAGAGGAGAGGATCGACACA 60.409 57.143 0.00 0.00 42.67 3.72
1338 1416 1.064946 GGATCGACACAGCGAGGAG 59.935 63.158 0.00 0.00 44.26 3.69
1370 1449 2.488355 CTTGCCCGCTGCTGATTG 59.512 61.111 0.00 0.00 42.00 2.67
1417 1506 4.323477 CAAGAACGGACCCGCCCA 62.323 66.667 8.55 0.00 44.19 5.36
1476 1571 3.194062 CTGATTTCGCCCTTCTTCTCTC 58.806 50.000 0.00 0.00 0.00 3.20
1477 1572 2.834549 TGATTTCGCCCTTCTTCTCTCT 59.165 45.455 0.00 0.00 0.00 3.10
1504 1599 2.044946 AAATCCAGGCCGTGCTCC 60.045 61.111 0.00 0.00 0.00 4.70
1535 1630 2.914278 TCCCGAGAAATTCCCCTTGTTA 59.086 45.455 0.00 0.00 0.00 2.41
1559 1654 1.644786 CTTGATTTCCCACGGCGTCC 61.645 60.000 10.85 0.00 0.00 4.79
1695 1790 3.282157 CGCCATGATGCCCTTCGG 61.282 66.667 0.00 0.00 0.00 4.30
2077 2172 3.480470 ACTTGGCCAGATATCGGATTTG 58.520 45.455 5.11 0.73 0.00 2.32
2086 2181 6.347725 GCCAGATATCGGATTTGTACAATGAC 60.348 42.308 9.56 4.10 0.00 3.06
2232 2341 1.771854 TGGGTTGGTACTTTCAGCTCA 59.228 47.619 0.00 0.00 0.00 4.26
2254 2363 2.429478 TGACATTCTCATGTGTGCAGG 58.571 47.619 0.00 0.00 44.22 4.85
2657 2767 2.368439 GTGACTTAATCTGGCATGCCA 58.632 47.619 36.26 36.26 45.02 4.92
2699 2809 7.292713 TCTATGTAGTGTTGGTGACTGTTAA 57.707 36.000 0.00 0.00 0.00 2.01
2702 2812 5.736813 TGTAGTGTTGGTGACTGTTAAACT 58.263 37.500 0.00 0.00 0.00 2.66
2718 2829 5.645929 TGTTAAACTTGAGAGTGTTTGCTCA 59.354 36.000 0.00 0.00 39.24 4.26
2728 2839 5.825507 AGAGTGTTTGCTCAGTGAATTTTC 58.174 37.500 0.00 0.00 37.94 2.29
2729 2840 5.357878 AGAGTGTTTGCTCAGTGAATTTTCA 59.642 36.000 0.00 0.00 37.94 2.69
2764 2996 8.235226 GGTTTCTACTAGCCTTTGTGAAAATAC 58.765 37.037 0.00 0.00 0.00 1.89
2766 2998 8.773404 TTCTACTAGCCTTTGTGAAAATACTC 57.227 34.615 0.00 0.00 0.00 2.59
2801 3148 0.445436 CAATCAGTCGAGCACTTGGC 59.555 55.000 0.00 0.00 45.30 4.52
2926 3274 6.204688 TGTTTTTCCATAGGCTAGATATTGCG 59.795 38.462 0.00 0.00 0.00 4.85
2928 3276 6.599356 TTTCCATAGGCTAGATATTGCGTA 57.401 37.500 0.00 0.00 34.72 4.42
2930 3278 4.401519 TCCATAGGCTAGATATTGCGTACC 59.598 45.833 0.00 0.00 33.37 3.34
2931 3279 4.441634 CCATAGGCTAGATATTGCGTACCC 60.442 50.000 0.00 0.00 33.37 3.69
2946 3294 2.738643 CGTACCCGAGTTTGATGCTGAT 60.739 50.000 0.00 0.00 35.63 2.90
2958 3306 8.743085 AGTTTGATGCTGATATTGTTCTGTAT 57.257 30.769 0.00 0.00 0.00 2.29
2961 3309 6.748132 TGATGCTGATATTGTTCTGTATCGA 58.252 36.000 0.00 0.00 38.56 3.59
2971 3392 9.823647 ATATTGTTCTGTATCGATTTCTGAGTT 57.176 29.630 1.71 0.00 0.00 3.01
3012 3433 3.949754 CAGTGTCCATGCCTGTCAATAAT 59.050 43.478 0.00 0.00 0.00 1.28
3057 3478 9.518906 CATGTTCATAAGCTAAAATAATGTGCA 57.481 29.630 0.00 0.00 0.00 4.57
3078 3499 4.744631 GCATTTTCTTCGTGTTTCCAACAT 59.255 37.500 0.00 0.00 44.35 2.71
3113 3534 6.000840 TCAGTGTAAGTTCCATTGTGCATAA 58.999 36.000 0.00 0.00 0.00 1.90
3117 3538 6.582295 GTGTAAGTTCCATTGTGCATAACTTG 59.418 38.462 0.00 0.00 39.86 3.16
3147 3569 1.243902 TTTGCCCATTCGGTCACTTC 58.756 50.000 0.00 0.00 0.00 3.01
3164 3586 4.696877 TCACTTCATCAGTAGCATGTTTGG 59.303 41.667 0.00 0.00 32.76 3.28
3209 3631 1.804748 CTTAAGGGTGTTCGTTCAGGC 59.195 52.381 0.00 0.00 0.00 4.85
3210 3632 0.759959 TAAGGGTGTTCGTTCAGGCA 59.240 50.000 0.00 0.00 0.00 4.75
3242 3666 7.822161 TTGTAAATTAGTGGCATCAGCATAT 57.178 32.000 0.00 0.00 44.61 1.78
3243 3667 7.439157 TGTAAATTAGTGGCATCAGCATATC 57.561 36.000 0.00 0.00 44.61 1.63
3244 3668 7.226441 TGTAAATTAGTGGCATCAGCATATCT 58.774 34.615 0.00 0.00 44.61 1.98
3245 3669 6.570672 AAATTAGTGGCATCAGCATATCTG 57.429 37.500 0.00 0.00 44.61 2.90
3265 3689 3.884693 CTGCATATGTGGCACTAATTCCA 59.115 43.478 19.83 8.03 36.11 3.53
3266 3690 4.472496 TGCATATGTGGCACTAATTCCAT 58.528 39.130 19.83 4.46 36.11 3.41
3267 3691 4.894705 TGCATATGTGGCACTAATTCCATT 59.105 37.500 19.83 0.00 36.11 3.16
3268 3692 5.221283 TGCATATGTGGCACTAATTCCATTG 60.221 40.000 19.83 4.92 36.11 2.82
3269 3693 5.221303 GCATATGTGGCACTAATTCCATTGT 60.221 40.000 19.83 0.00 34.47 2.71
3270 3694 4.724074 ATGTGGCACTAATTCCATTGTG 57.276 40.909 19.83 0.00 34.47 3.33
3302 3733 4.449743 TGTACTGTAATTTTGTCAGCGACC 59.550 41.667 6.30 0.00 33.12 4.79
3305 3736 3.417101 TGTAATTTTGTCAGCGACCCAT 58.583 40.909 6.30 0.00 0.00 4.00
3321 3752 7.167968 CAGCGACCCATTTATGATAAATGTTTG 59.832 37.037 27.03 20.13 36.24 2.93
3388 4016 3.071479 TGTCATCGTGGCCTTTCTTAAC 58.929 45.455 3.32 0.00 0.00 2.01
3444 4095 8.952278 GTGGTAATCATTTACTGTTATGGTGAA 58.048 33.333 0.00 0.00 38.22 3.18
3483 4134 6.313905 GTCTTCTATTGATGTTGTGAATCCGT 59.686 38.462 0.00 0.00 0.00 4.69
3589 4256 5.441718 AATAAGGATCAGGAGAACAGCAA 57.558 39.130 0.00 0.00 0.00 3.91
3648 4318 3.788227 ACAACAACAGGGCTTATGAGA 57.212 42.857 0.00 0.00 0.00 3.27
4052 4737 9.964354 TTAGTGAATGATATTATCCAATCCCAG 57.036 33.333 1.27 0.00 0.00 4.45
4080 4765 2.508526 ACTGAATGCCTTGTTCTGGAC 58.491 47.619 0.00 0.00 0.00 4.02
4089 4774 3.381590 GCCTTGTTCTGGACTGTTTTCTT 59.618 43.478 0.00 0.00 0.00 2.52
4092 4777 3.351740 TGTTCTGGACTGTTTTCTTGCA 58.648 40.909 0.00 0.00 0.00 4.08
4096 4781 2.945008 CTGGACTGTTTTCTTGCACTGA 59.055 45.455 0.00 0.00 0.00 3.41
4102 4787 6.426937 GGACTGTTTTCTTGCACTGATACTTA 59.573 38.462 0.00 0.00 0.00 2.24
4103 4788 7.041372 GGACTGTTTTCTTGCACTGATACTTAA 60.041 37.037 0.00 0.00 0.00 1.85
4123 4808 4.823790 AAAAGTCACGGAACCAATACAC 57.176 40.909 0.00 0.00 0.00 2.90
4142 4836 3.071602 ACACTTTGAGGCAGATACACAGT 59.928 43.478 0.00 0.00 0.00 3.55
4143 4837 4.067896 CACTTTGAGGCAGATACACAGTT 58.932 43.478 0.00 0.00 0.00 3.16
4146 4840 3.319137 TGAGGCAGATACACAGTTGTC 57.681 47.619 0.00 0.00 37.15 3.18
4150 4844 3.257375 AGGCAGATACACAGTTGTCGTAA 59.743 43.478 0.00 0.00 37.15 3.18
4158 4852 3.942748 ACACAGTTGTCGTAAACCATTGT 59.057 39.130 0.38 0.00 0.00 2.71
4502 5196 4.787871 GGGGAGATGAATGCGGAG 57.212 61.111 0.00 0.00 0.00 4.63
4503 5197 1.072159 GGGGAGATGAATGCGGAGG 59.928 63.158 0.00 0.00 0.00 4.30
4504 5198 1.700042 GGGGAGATGAATGCGGAGGT 61.700 60.000 0.00 0.00 0.00 3.85
4505 5199 0.181350 GGGAGATGAATGCGGAGGTT 59.819 55.000 0.00 0.00 0.00 3.50
4506 5200 1.303309 GGAGATGAATGCGGAGGTTG 58.697 55.000 0.00 0.00 0.00 3.77
4507 5201 1.407437 GGAGATGAATGCGGAGGTTGT 60.407 52.381 0.00 0.00 0.00 3.32
4508 5202 2.158957 GGAGATGAATGCGGAGGTTGTA 60.159 50.000 0.00 0.00 0.00 2.41
4509 5203 3.495100 GGAGATGAATGCGGAGGTTGTAT 60.495 47.826 0.00 0.00 0.00 2.29
4510 5204 4.262463 GGAGATGAATGCGGAGGTTGTATA 60.262 45.833 0.00 0.00 0.00 1.47
4511 5205 4.887748 AGATGAATGCGGAGGTTGTATAG 58.112 43.478 0.00 0.00 0.00 1.31
4512 5206 3.469008 TGAATGCGGAGGTTGTATAGG 57.531 47.619 0.00 0.00 0.00 2.57
4513 5207 2.104111 TGAATGCGGAGGTTGTATAGGG 59.896 50.000 0.00 0.00 0.00 3.53
4514 5208 1.056660 ATGCGGAGGTTGTATAGGGG 58.943 55.000 0.00 0.00 0.00 4.79
4515 5209 0.031917 TGCGGAGGTTGTATAGGGGA 60.032 55.000 0.00 0.00 0.00 4.81
4516 5210 0.680061 GCGGAGGTTGTATAGGGGAG 59.320 60.000 0.00 0.00 0.00 4.30
4517 5211 1.339097 CGGAGGTTGTATAGGGGAGG 58.661 60.000 0.00 0.00 0.00 4.30
4518 5212 1.133262 CGGAGGTTGTATAGGGGAGGA 60.133 57.143 0.00 0.00 0.00 3.71
4519 5213 2.610873 GGAGGTTGTATAGGGGAGGAG 58.389 57.143 0.00 0.00 0.00 3.69
4520 5214 2.610873 GAGGTTGTATAGGGGAGGAGG 58.389 57.143 0.00 0.00 0.00 4.30
4521 5215 1.223337 AGGTTGTATAGGGGAGGAGGG 59.777 57.143 0.00 0.00 0.00 4.30
4522 5216 1.730851 GTTGTATAGGGGAGGAGGGG 58.269 60.000 0.00 0.00 0.00 4.79
4523 5217 0.571236 TTGTATAGGGGAGGAGGGGG 59.429 60.000 0.00 0.00 0.00 5.40
4524 5218 1.229561 GTATAGGGGAGGAGGGGGC 60.230 68.421 0.00 0.00 0.00 5.80
4525 5219 2.865147 TATAGGGGAGGAGGGGGCG 61.865 68.421 0.00 0.00 0.00 6.13
4601 5301 5.182001 CAGTTGCTCTAACATTTAGGCTGTT 59.818 40.000 0.00 0.00 41.88 3.16
4606 5306 6.594159 TGCTCTAACATTTAGGCTGTTCTTAC 59.406 38.462 0.00 0.00 37.89 2.34
4673 5375 4.981812 ACACTAAGGAAACGAGGGAATTT 58.018 39.130 0.00 0.00 0.00 1.82
4678 5380 2.642807 AGGAAACGAGGGAATTTGAGGA 59.357 45.455 0.00 0.00 0.00 3.71
4681 5383 3.721087 AACGAGGGAATTTGAGGACAT 57.279 42.857 0.00 0.00 0.00 3.06
4695 5397 8.871686 ATTTGAGGACATGTTCAAAAGTTTAC 57.128 30.769 22.91 0.00 43.95 2.01
4703 5405 9.687717 GACATGTTCAAAAGTTTACAATTGTTG 57.312 29.630 17.78 7.12 0.00 3.33
4727 5429 2.450476 TGCTCAGCTCTACATGAGTCA 58.550 47.619 0.00 0.00 43.94 3.41
4731 5433 4.981674 GCTCAGCTCTACATGAGTCAATAC 59.018 45.833 0.00 0.00 43.94 1.89
4799 5501 4.022416 ACACTTCTGTTTGTGCTGAAAACA 60.022 37.500 10.37 10.37 43.39 2.83
4833 5535 0.597637 CAGAGACAACAACCGCTCGT 60.598 55.000 0.00 0.00 32.80 4.18
4844 5546 1.805945 CCGCTCGTGAGGTGTTAGC 60.806 63.158 0.00 0.00 0.00 3.09
4845 5547 1.080772 CGCTCGTGAGGTGTTAGCA 60.081 57.895 0.00 0.00 32.69 3.49
4846 5548 0.666274 CGCTCGTGAGGTGTTAGCAA 60.666 55.000 0.00 0.00 32.69 3.91
4847 5549 0.790814 GCTCGTGAGGTGTTAGCAAC 59.209 55.000 0.00 0.00 33.38 4.17
4849 5551 2.061773 CTCGTGAGGTGTTAGCAACTG 58.938 52.381 0.17 0.00 43.85 3.16
4850 5552 1.684450 TCGTGAGGTGTTAGCAACTGA 59.316 47.619 0.17 0.00 43.85 3.41
4851 5553 2.101750 TCGTGAGGTGTTAGCAACTGAA 59.898 45.455 0.17 0.00 43.85 3.02
4852 5554 3.067106 CGTGAGGTGTTAGCAACTGAAT 58.933 45.455 0.17 0.00 43.85 2.57
4853 5555 3.123621 CGTGAGGTGTTAGCAACTGAATC 59.876 47.826 0.17 0.00 43.85 2.52
4854 5556 4.319177 GTGAGGTGTTAGCAACTGAATCT 58.681 43.478 0.17 0.00 43.85 2.40
4855 5557 4.390297 GTGAGGTGTTAGCAACTGAATCTC 59.610 45.833 0.17 0.00 43.85 2.75
4856 5558 4.284490 TGAGGTGTTAGCAACTGAATCTCT 59.716 41.667 0.17 0.00 43.85 3.10
4857 5559 5.221722 TGAGGTGTTAGCAACTGAATCTCTT 60.222 40.000 0.17 0.00 43.85 2.85
4858 5560 4.999950 AGGTGTTAGCAACTGAATCTCTTG 59.000 41.667 0.00 0.00 41.90 3.02
4859 5561 4.378874 GGTGTTAGCAACTGAATCTCTTGC 60.379 45.833 7.18 7.18 40.55 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 8.787852 GGCCACCAACAATAATTAAATCAAAAA 58.212 29.630 0.00 0.00 0.00 1.94
35 36 8.160106 AGGCCACCAACAATAATTAAATCAAAA 58.840 29.630 5.01 0.00 0.00 2.44
36 37 7.684529 AGGCCACCAACAATAATTAAATCAAA 58.315 30.769 5.01 0.00 0.00 2.69
37 38 7.251321 AGGCCACCAACAATAATTAAATCAA 57.749 32.000 5.01 0.00 0.00 2.57
38 39 6.865834 AGGCCACCAACAATAATTAAATCA 57.134 33.333 5.01 0.00 0.00 2.57
39 40 7.102993 ACAAGGCCACCAACAATAATTAAATC 58.897 34.615 5.01 0.00 0.00 2.17
40 41 7.014988 ACAAGGCCACCAACAATAATTAAAT 57.985 32.000 5.01 0.00 0.00 1.40
41 42 6.426646 ACAAGGCCACCAACAATAATTAAA 57.573 33.333 5.01 0.00 0.00 1.52
42 43 6.722129 AGTACAAGGCCACCAACAATAATTAA 59.278 34.615 5.01 0.00 0.00 1.40
43 44 6.249951 AGTACAAGGCCACCAACAATAATTA 58.750 36.000 5.01 0.00 0.00 1.40
44 45 5.083821 AGTACAAGGCCACCAACAATAATT 58.916 37.500 5.01 0.00 0.00 1.40
45 46 4.672899 AGTACAAGGCCACCAACAATAAT 58.327 39.130 5.01 0.00 0.00 1.28
46 47 4.076394 GAGTACAAGGCCACCAACAATAA 58.924 43.478 5.01 0.00 0.00 1.40
47 48 3.560453 GGAGTACAAGGCCACCAACAATA 60.560 47.826 5.01 0.00 0.00 1.90
48 49 2.514803 GAGTACAAGGCCACCAACAAT 58.485 47.619 5.01 0.00 0.00 2.71
49 50 1.477923 GGAGTACAAGGCCACCAACAA 60.478 52.381 5.01 0.00 0.00 2.83
50 51 0.109723 GGAGTACAAGGCCACCAACA 59.890 55.000 5.01 0.00 0.00 3.33
51 52 0.608308 GGGAGTACAAGGCCACCAAC 60.608 60.000 5.01 0.00 0.00 3.77
52 53 0.770557 AGGGAGTACAAGGCCACCAA 60.771 55.000 5.01 0.00 0.00 3.67
53 54 1.151899 AGGGAGTACAAGGCCACCA 60.152 57.895 5.01 0.00 0.00 4.17
54 55 0.910088 AGAGGGAGTACAAGGCCACC 60.910 60.000 5.01 0.00 0.00 4.61
55 56 0.250513 CAGAGGGAGTACAAGGCCAC 59.749 60.000 5.01 0.00 0.00 5.01
56 57 0.178903 ACAGAGGGAGTACAAGGCCA 60.179 55.000 5.01 0.00 0.00 5.36
57 58 0.537653 GACAGAGGGAGTACAAGGCC 59.462 60.000 0.00 0.00 0.00 5.19
58 59 1.066787 GTGACAGAGGGAGTACAAGGC 60.067 57.143 0.00 0.00 0.00 4.35
59 60 2.232452 CTGTGACAGAGGGAGTACAAGG 59.768 54.545 6.79 0.00 32.44 3.61
60 61 2.894126 ACTGTGACAGAGGGAGTACAAG 59.106 50.000 20.97 0.00 35.18 3.16
61 62 2.958818 ACTGTGACAGAGGGAGTACAA 58.041 47.619 20.97 0.00 35.18 2.41
62 63 2.677542 ACTGTGACAGAGGGAGTACA 57.322 50.000 20.97 0.00 35.18 2.90
63 64 4.765856 TCTAAACTGTGACAGAGGGAGTAC 59.234 45.833 20.97 0.00 35.18 2.73
64 65 4.994282 TCTAAACTGTGACAGAGGGAGTA 58.006 43.478 20.97 1.25 35.18 2.59
65 66 3.845860 TCTAAACTGTGACAGAGGGAGT 58.154 45.455 20.97 0.00 35.18 3.85
66 67 4.322349 CCTTCTAAACTGTGACAGAGGGAG 60.322 50.000 20.97 10.38 36.62 4.30
67 68 3.578716 CCTTCTAAACTGTGACAGAGGGA 59.421 47.826 20.97 8.65 36.62 4.20
68 69 3.866449 GCCTTCTAAACTGTGACAGAGGG 60.866 52.174 20.97 7.56 37.34 4.30
69 70 3.244215 TGCCTTCTAAACTGTGACAGAGG 60.244 47.826 20.97 14.87 35.18 3.69
70 71 3.743396 GTGCCTTCTAAACTGTGACAGAG 59.257 47.826 20.97 6.52 35.18 3.35
71 72 3.133901 TGTGCCTTCTAAACTGTGACAGA 59.866 43.478 20.97 0.00 35.18 3.41
72 73 3.466836 TGTGCCTTCTAAACTGTGACAG 58.533 45.455 11.70 11.70 37.52 3.51
73 74 3.552132 TGTGCCTTCTAAACTGTGACA 57.448 42.857 0.00 0.00 0.00 3.58
74 75 5.438761 AAATGTGCCTTCTAAACTGTGAC 57.561 39.130 0.00 0.00 0.00 3.67
75 76 7.575414 TTTAAATGTGCCTTCTAAACTGTGA 57.425 32.000 0.00 0.00 0.00 3.58
76 77 8.816640 AATTTAAATGTGCCTTCTAAACTGTG 57.183 30.769 0.39 0.00 0.00 3.66
77 78 9.260002 CAAATTTAAATGTGCCTTCTAAACTGT 57.740 29.630 5.42 0.00 0.00 3.55
78 79 8.223100 GCAAATTTAAATGTGCCTTCTAAACTG 58.777 33.333 26.63 0.00 42.56 3.16
79 80 7.116233 CGCAAATTTAAATGTGCCTTCTAAACT 59.884 33.333 29.30 0.00 44.94 2.66
80 81 7.095816 ACGCAAATTTAAATGTGCCTTCTAAAC 60.096 33.333 29.30 7.11 44.94 2.01
81 82 6.926272 ACGCAAATTTAAATGTGCCTTCTAAA 59.074 30.769 29.30 0.00 44.94 1.85
82 83 6.364706 CACGCAAATTTAAATGTGCCTTCTAA 59.635 34.615 29.30 0.00 44.94 2.10
83 84 5.861251 CACGCAAATTTAAATGTGCCTTCTA 59.139 36.000 29.30 0.00 44.94 2.10
84 85 4.685628 CACGCAAATTTAAATGTGCCTTCT 59.314 37.500 29.30 12.59 44.94 2.85
85 86 4.666402 GCACGCAAATTTAAATGTGCCTTC 60.666 41.667 29.30 17.84 44.94 3.46
86 87 3.186205 GCACGCAAATTTAAATGTGCCTT 59.814 39.130 29.30 18.11 44.94 4.35
87 88 2.736192 GCACGCAAATTTAAATGTGCCT 59.264 40.909 29.30 19.39 44.94 4.75
88 89 2.472073 CGCACGCAAATTTAAATGTGCC 60.472 45.455 29.30 18.35 44.94 5.01
89 90 2.154772 ACGCACGCAAATTTAAATGTGC 59.845 40.909 26.96 26.96 44.43 4.57
90 91 4.367716 AACGCACGCAAATTTAAATGTG 57.632 36.364 13.23 13.23 0.00 3.21
91 92 4.504461 TGAAACGCACGCAAATTTAAATGT 59.496 33.333 0.39 0.00 0.00 2.71
92 93 4.832829 GTGAAACGCACGCAAATTTAAATG 59.167 37.500 0.39 0.00 37.83 2.32
93 94 5.000675 GTGAAACGCACGCAAATTTAAAT 57.999 34.783 0.00 0.00 37.83 1.40
94 95 4.424476 GTGAAACGCACGCAAATTTAAA 57.576 36.364 0.00 0.00 37.83 1.52
106 107 3.472652 ACCTTGTCTATTGTGAAACGCA 58.527 40.909 0.00 0.00 42.39 5.24
107 108 4.483476 AACCTTGTCTATTGTGAAACGC 57.517 40.909 0.00 0.00 42.39 4.84
108 109 6.348213 CCCTAAACCTTGTCTATTGTGAAACG 60.348 42.308 0.00 0.00 42.39 3.60
109 110 6.569801 GCCCTAAACCTTGTCTATTGTGAAAC 60.570 42.308 0.00 0.00 37.35 2.78
110 111 5.475564 GCCCTAAACCTTGTCTATTGTGAAA 59.524 40.000 0.00 0.00 0.00 2.69
111 112 5.007682 GCCCTAAACCTTGTCTATTGTGAA 58.992 41.667 0.00 0.00 0.00 3.18
112 113 4.585879 GCCCTAAACCTTGTCTATTGTGA 58.414 43.478 0.00 0.00 0.00 3.58
113 114 3.374058 CGCCCTAAACCTTGTCTATTGTG 59.626 47.826 0.00 0.00 0.00 3.33
114 115 3.606687 CGCCCTAAACCTTGTCTATTGT 58.393 45.455 0.00 0.00 0.00 2.71
115 116 2.354821 GCGCCCTAAACCTTGTCTATTG 59.645 50.000 0.00 0.00 0.00 1.90
116 117 2.026636 TGCGCCCTAAACCTTGTCTATT 60.027 45.455 4.18 0.00 0.00 1.73
117 118 1.557832 TGCGCCCTAAACCTTGTCTAT 59.442 47.619 4.18 0.00 0.00 1.98
118 119 0.978151 TGCGCCCTAAACCTTGTCTA 59.022 50.000 4.18 0.00 0.00 2.59
119 120 0.328258 ATGCGCCCTAAACCTTGTCT 59.672 50.000 4.18 0.00 0.00 3.41
120 121 1.135402 CAATGCGCCCTAAACCTTGTC 60.135 52.381 4.18 0.00 0.00 3.18
121 122 0.887933 CAATGCGCCCTAAACCTTGT 59.112 50.000 4.18 0.00 0.00 3.16
122 123 0.887933 ACAATGCGCCCTAAACCTTG 59.112 50.000 4.18 0.00 0.00 3.61
123 124 2.500392 TACAATGCGCCCTAAACCTT 57.500 45.000 4.18 0.00 0.00 3.50
124 125 2.729028 ATACAATGCGCCCTAAACCT 57.271 45.000 4.18 0.00 0.00 3.50
125 126 3.793797 AAATACAATGCGCCCTAAACC 57.206 42.857 4.18 0.00 0.00 3.27
126 127 7.200455 AGAAATAAATACAATGCGCCCTAAAC 58.800 34.615 4.18 0.00 0.00 2.01
127 128 7.341445 AGAAATAAATACAATGCGCCCTAAA 57.659 32.000 4.18 0.00 0.00 1.85
128 129 6.952773 AGAAATAAATACAATGCGCCCTAA 57.047 33.333 4.18 0.00 0.00 2.69
129 130 7.221450 ACTAGAAATAAATACAATGCGCCCTA 58.779 34.615 4.18 0.00 0.00 3.53
130 131 6.062095 ACTAGAAATAAATACAATGCGCCCT 58.938 36.000 4.18 0.00 0.00 5.19
131 132 6.313744 ACTAGAAATAAATACAATGCGCCC 57.686 37.500 4.18 0.00 0.00 6.13
132 133 7.015877 GCTACTAGAAATAAATACAATGCGCC 58.984 38.462 4.18 0.00 0.00 6.53
133 134 7.797819 AGCTACTAGAAATAAATACAATGCGC 58.202 34.615 0.00 0.00 0.00 6.09
146 147 9.790344 TCGGAGTACTAATTAGCTACTAGAAAT 57.210 33.333 19.17 0.00 0.00 2.17
147 148 9.790344 ATCGGAGTACTAATTAGCTACTAGAAA 57.210 33.333 19.17 11.04 0.00 2.52
207 208 5.359194 TTGGTTGTGAAATGGGCTAAAAA 57.641 34.783 0.00 0.00 0.00 1.94
208 209 5.559148 ATTGGTTGTGAAATGGGCTAAAA 57.441 34.783 0.00 0.00 0.00 1.52
209 210 6.013379 TCTATTGGTTGTGAAATGGGCTAAA 58.987 36.000 0.00 0.00 0.00 1.85
210 211 5.575157 TCTATTGGTTGTGAAATGGGCTAA 58.425 37.500 0.00 0.00 0.00 3.09
211 212 5.186256 TCTATTGGTTGTGAAATGGGCTA 57.814 39.130 0.00 0.00 0.00 3.93
212 213 4.046286 TCTATTGGTTGTGAAATGGGCT 57.954 40.909 0.00 0.00 0.00 5.19
213 214 6.273071 GTTATCTATTGGTTGTGAAATGGGC 58.727 40.000 0.00 0.00 0.00 5.36
214 215 6.379703 TGGTTATCTATTGGTTGTGAAATGGG 59.620 38.462 0.00 0.00 0.00 4.00
215 216 7.257722 GTGGTTATCTATTGGTTGTGAAATGG 58.742 38.462 0.00 0.00 0.00 3.16
216 217 7.122650 AGGTGGTTATCTATTGGTTGTGAAATG 59.877 37.037 0.00 0.00 0.00 2.32
217 218 7.182060 AGGTGGTTATCTATTGGTTGTGAAAT 58.818 34.615 0.00 0.00 0.00 2.17
218 219 6.548321 AGGTGGTTATCTATTGGTTGTGAAA 58.452 36.000 0.00 0.00 0.00 2.69
219 220 6.134535 AGGTGGTTATCTATTGGTTGTGAA 57.865 37.500 0.00 0.00 0.00 3.18
220 221 5.772393 AGGTGGTTATCTATTGGTTGTGA 57.228 39.130 0.00 0.00 0.00 3.58
221 222 6.055588 CCTAGGTGGTTATCTATTGGTTGTG 58.944 44.000 0.00 0.00 0.00 3.33
222 223 6.248569 CCTAGGTGGTTATCTATTGGTTGT 57.751 41.667 0.00 0.00 0.00 3.32
237 238 4.944317 GGAAATTCTCTTGAACCTAGGTGG 59.056 45.833 17.14 6.65 42.93 4.61
238 239 5.560724 TGGAAATTCTCTTGAACCTAGGTG 58.439 41.667 17.14 2.42 34.71 4.00
239 240 5.843019 TGGAAATTCTCTTGAACCTAGGT 57.157 39.130 9.21 9.21 34.71 3.08
240 241 6.348540 CGTTTGGAAATTCTCTTGAACCTAGG 60.349 42.308 7.41 7.41 34.71 3.02
241 242 6.603095 CGTTTGGAAATTCTCTTGAACCTAG 58.397 40.000 0.00 0.00 34.71 3.02
242 243 5.048991 GCGTTTGGAAATTCTCTTGAACCTA 60.049 40.000 0.00 0.00 34.71 3.08
243 244 4.261614 GCGTTTGGAAATTCTCTTGAACCT 60.262 41.667 0.00 0.00 34.71 3.50
244 245 3.981416 GCGTTTGGAAATTCTCTTGAACC 59.019 43.478 0.00 0.00 34.71 3.62
245 246 3.664025 CGCGTTTGGAAATTCTCTTGAAC 59.336 43.478 0.00 0.00 34.71 3.18
246 247 3.851838 GCGCGTTTGGAAATTCTCTTGAA 60.852 43.478 8.43 0.00 36.54 2.69
247 248 2.350388 GCGCGTTTGGAAATTCTCTTGA 60.350 45.455 8.43 0.00 0.00 3.02
248 249 1.978782 GCGCGTTTGGAAATTCTCTTG 59.021 47.619 8.43 0.00 0.00 3.02
249 250 1.068541 GGCGCGTTTGGAAATTCTCTT 60.069 47.619 8.43 0.00 0.00 2.85
250 251 0.521735 GGCGCGTTTGGAAATTCTCT 59.478 50.000 8.43 0.00 0.00 3.10
251 252 0.521735 AGGCGCGTTTGGAAATTCTC 59.478 50.000 8.43 0.00 0.00 2.87
252 253 0.958822 AAGGCGCGTTTGGAAATTCT 59.041 45.000 10.00 0.00 0.00 2.40
253 254 1.068541 AGAAGGCGCGTTTGGAAATTC 60.069 47.619 17.42 1.26 0.00 2.17
254 255 0.958822 AGAAGGCGCGTTTGGAAATT 59.041 45.000 17.42 0.00 0.00 1.82
255 256 1.816074 TAGAAGGCGCGTTTGGAAAT 58.184 45.000 17.42 2.40 0.00 2.17
256 257 1.595466 TTAGAAGGCGCGTTTGGAAA 58.405 45.000 17.42 6.42 0.00 3.13
257 258 1.264826 GTTTAGAAGGCGCGTTTGGAA 59.735 47.619 17.42 8.61 0.00 3.53
258 259 0.869730 GTTTAGAAGGCGCGTTTGGA 59.130 50.000 17.42 2.58 0.00 3.53
259 260 0.109919 GGTTTAGAAGGCGCGTTTGG 60.110 55.000 17.42 0.00 0.00 3.28
260 261 0.452122 CGGTTTAGAAGGCGCGTTTG 60.452 55.000 17.42 0.00 0.00 2.93
261 262 0.881600 ACGGTTTAGAAGGCGCGTTT 60.882 50.000 17.42 6.10 0.00 3.60
262 263 1.301165 ACGGTTTAGAAGGCGCGTT 60.301 52.632 16.28 16.28 0.00 4.84
263 264 2.025418 CACGGTTTAGAAGGCGCGT 61.025 57.895 8.43 0.00 0.00 6.01
264 265 1.735198 TCACGGTTTAGAAGGCGCG 60.735 57.895 0.00 0.00 0.00 6.86
265 266 1.785951 GTCACGGTTTAGAAGGCGC 59.214 57.895 0.00 0.00 0.00 6.53
266 267 1.349259 CCGTCACGGTTTAGAAGGCG 61.349 60.000 8.54 0.00 42.73 5.52
267 268 2.452767 CCGTCACGGTTTAGAAGGC 58.547 57.895 8.54 0.00 42.73 4.35
278 279 1.100510 TTCATACTCCCTCCGTCACG 58.899 55.000 0.00 0.00 0.00 4.35
279 280 2.431057 ACATTCATACTCCCTCCGTCAC 59.569 50.000 0.00 0.00 0.00 3.67
280 281 2.430694 CACATTCATACTCCCTCCGTCA 59.569 50.000 0.00 0.00 0.00 4.35
281 282 2.431057 ACACATTCATACTCCCTCCGTC 59.569 50.000 0.00 0.00 0.00 4.79
282 283 2.467880 ACACATTCATACTCCCTCCGT 58.532 47.619 0.00 0.00 0.00 4.69
283 284 4.665833 TTACACATTCATACTCCCTCCG 57.334 45.455 0.00 0.00 0.00 4.63
284 285 5.930135 ACATTACACATTCATACTCCCTCC 58.070 41.667 0.00 0.00 0.00 4.30
285 286 7.727181 AGTACATTACACATTCATACTCCCTC 58.273 38.462 0.00 0.00 0.00 4.30
286 287 7.676683 AGTACATTACACATTCATACTCCCT 57.323 36.000 0.00 0.00 0.00 4.20
287 288 9.640963 GATAGTACATTACACATTCATACTCCC 57.359 37.037 0.00 0.00 0.00 4.30
294 295 9.719355 ACAGTTTGATAGTACATTACACATTCA 57.281 29.630 0.00 0.00 0.00 2.57
295 296 9.973246 CACAGTTTGATAGTACATTACACATTC 57.027 33.333 0.00 0.00 0.00 2.67
296 297 9.719355 TCACAGTTTGATAGTACATTACACATT 57.281 29.630 0.00 0.00 0.00 2.71
297 298 9.151471 GTCACAGTTTGATAGTACATTACACAT 57.849 33.333 0.00 0.00 36.32 3.21
298 299 7.601130 GGTCACAGTTTGATAGTACATTACACA 59.399 37.037 0.00 0.00 36.32 3.72
299 300 7.601130 TGGTCACAGTTTGATAGTACATTACAC 59.399 37.037 0.00 0.00 36.32 2.90
300 301 7.672240 TGGTCACAGTTTGATAGTACATTACA 58.328 34.615 0.00 0.00 36.32 2.41
301 302 8.718102 ATGGTCACAGTTTGATAGTACATTAC 57.282 34.615 0.00 0.00 36.32 1.89
303 304 9.733556 TTAATGGTCACAGTTTGATAGTACATT 57.266 29.630 0.00 0.00 36.32 2.71
304 305 9.733556 TTTAATGGTCACAGTTTGATAGTACAT 57.266 29.630 0.00 0.00 36.32 2.29
305 306 9.562408 TTTTAATGGTCACAGTTTGATAGTACA 57.438 29.630 0.00 0.00 36.32 2.90
329 330 9.763465 CTCGTACGGTATGATTTTTGTATTTTT 57.237 29.630 16.52 0.00 0.00 1.94
330 331 8.392612 CCTCGTACGGTATGATTTTTGTATTTT 58.607 33.333 16.52 0.00 0.00 1.82
331 332 7.765360 TCCTCGTACGGTATGATTTTTGTATTT 59.235 33.333 16.52 0.00 0.00 1.40
332 333 7.267128 TCCTCGTACGGTATGATTTTTGTATT 58.733 34.615 16.52 0.00 0.00 1.89
333 334 6.808829 TCCTCGTACGGTATGATTTTTGTAT 58.191 36.000 16.52 0.00 0.00 2.29
334 335 6.206395 TCCTCGTACGGTATGATTTTTGTA 57.794 37.500 16.52 0.00 0.00 2.41
335 336 5.075858 TCCTCGTACGGTATGATTTTTGT 57.924 39.130 16.52 0.00 0.00 2.83
336 337 5.579511 AGTTCCTCGTACGGTATGATTTTTG 59.420 40.000 16.52 0.00 0.00 2.44
337 338 5.727434 AGTTCCTCGTACGGTATGATTTTT 58.273 37.500 16.52 0.00 0.00 1.94
338 339 5.334724 AGTTCCTCGTACGGTATGATTTT 57.665 39.130 16.52 0.00 0.00 1.82
339 340 4.996788 AGTTCCTCGTACGGTATGATTT 57.003 40.909 16.52 0.00 0.00 2.17
340 341 5.766670 TCATAGTTCCTCGTACGGTATGATT 59.233 40.000 16.52 0.00 0.00 2.57
341 342 5.311265 TCATAGTTCCTCGTACGGTATGAT 58.689 41.667 16.52 0.88 0.00 2.45
342 343 4.707105 TCATAGTTCCTCGTACGGTATGA 58.293 43.478 16.52 14.06 0.00 2.15
343 344 4.753610 TCTCATAGTTCCTCGTACGGTATG 59.246 45.833 16.52 12.26 0.00 2.39
344 345 4.754114 GTCTCATAGTTCCTCGTACGGTAT 59.246 45.833 16.52 1.01 0.00 2.73
345 346 4.122776 GTCTCATAGTTCCTCGTACGGTA 58.877 47.826 16.52 0.00 0.00 4.02
346 347 2.941720 GTCTCATAGTTCCTCGTACGGT 59.058 50.000 16.52 0.00 0.00 4.83
347 348 2.290093 GGTCTCATAGTTCCTCGTACGG 59.710 54.545 16.52 6.09 0.00 4.02
348 349 3.002451 CAGGTCTCATAGTTCCTCGTACG 59.998 52.174 9.53 9.53 0.00 3.67
349 350 4.197750 TCAGGTCTCATAGTTCCTCGTAC 58.802 47.826 0.00 0.00 0.00 3.67
350 351 4.452825 CTCAGGTCTCATAGTTCCTCGTA 58.547 47.826 0.00 0.00 0.00 3.43
351 352 3.283751 CTCAGGTCTCATAGTTCCTCGT 58.716 50.000 0.00 0.00 0.00 4.18
352 353 2.621055 CCTCAGGTCTCATAGTTCCTCG 59.379 54.545 0.00 0.00 0.00 4.63
353 354 2.364002 GCCTCAGGTCTCATAGTTCCTC 59.636 54.545 0.00 0.00 0.00 3.71
354 355 2.393646 GCCTCAGGTCTCATAGTTCCT 58.606 52.381 0.00 0.00 0.00 3.36
355 356 1.414550 GGCCTCAGGTCTCATAGTTCC 59.585 57.143 0.00 0.00 0.00 3.62
356 357 2.111384 TGGCCTCAGGTCTCATAGTTC 58.889 52.381 3.32 0.00 0.00 3.01
357 358 2.237392 GTTGGCCTCAGGTCTCATAGTT 59.763 50.000 3.32 0.00 0.00 2.24
358 359 1.834263 GTTGGCCTCAGGTCTCATAGT 59.166 52.381 3.32 0.00 0.00 2.12
359 360 2.114616 AGTTGGCCTCAGGTCTCATAG 58.885 52.381 3.32 0.00 0.00 2.23
360 361 2.254152 AGTTGGCCTCAGGTCTCATA 57.746 50.000 3.32 0.00 0.00 2.15
361 362 1.834263 GTAGTTGGCCTCAGGTCTCAT 59.166 52.381 3.32 0.00 0.00 2.90
362 363 1.267121 GTAGTTGGCCTCAGGTCTCA 58.733 55.000 3.32 0.00 0.00 3.27
363 364 1.205893 CTGTAGTTGGCCTCAGGTCTC 59.794 57.143 3.32 0.00 0.00 3.36
364 365 1.270907 CTGTAGTTGGCCTCAGGTCT 58.729 55.000 3.32 0.00 0.00 3.85
365 366 0.977395 ACTGTAGTTGGCCTCAGGTC 59.023 55.000 3.32 0.00 32.92 3.85
366 367 0.687354 CACTGTAGTTGGCCTCAGGT 59.313 55.000 3.32 0.00 32.92 4.00
367 368 0.687354 ACACTGTAGTTGGCCTCAGG 59.313 55.000 3.32 0.00 32.92 3.86
368 369 3.195610 TCATACACTGTAGTTGGCCTCAG 59.804 47.826 3.32 7.53 0.00 3.35
369 370 3.056107 GTCATACACTGTAGTTGGCCTCA 60.056 47.826 3.32 0.00 0.00 3.86
370 371 3.522553 GTCATACACTGTAGTTGGCCTC 58.477 50.000 3.32 0.00 0.00 4.70
371 372 2.236395 GGTCATACACTGTAGTTGGCCT 59.764 50.000 3.32 0.00 0.00 5.19
372 373 2.629051 GGTCATACACTGTAGTTGGCC 58.371 52.381 0.00 0.00 0.00 5.36
373 374 2.629051 GGGTCATACACTGTAGTTGGC 58.371 52.381 0.00 0.00 0.00 4.52
374 375 2.418197 CGGGGTCATACACTGTAGTTGG 60.418 54.545 0.00 0.00 0.00 3.77
375 376 2.494471 TCGGGGTCATACACTGTAGTTG 59.506 50.000 0.00 0.00 0.00 3.16
376 377 2.494870 GTCGGGGTCATACACTGTAGTT 59.505 50.000 0.00 0.00 0.00 2.24
377 378 2.097825 GTCGGGGTCATACACTGTAGT 58.902 52.381 0.00 0.00 0.00 2.73
378 379 1.065102 CGTCGGGGTCATACACTGTAG 59.935 57.143 0.00 0.00 0.00 2.74
379 380 1.097232 CGTCGGGGTCATACACTGTA 58.903 55.000 0.00 0.00 0.00 2.74
380 381 0.896940 ACGTCGGGGTCATACACTGT 60.897 55.000 0.00 0.00 0.00 3.55
381 382 0.245539 AACGTCGGGGTCATACACTG 59.754 55.000 0.00 0.00 0.00 3.66
382 383 0.529378 GAACGTCGGGGTCATACACT 59.471 55.000 0.00 0.00 0.00 3.55
383 384 0.244450 TGAACGTCGGGGTCATACAC 59.756 55.000 0.00 0.00 0.00 2.90
384 385 1.187974 ATGAACGTCGGGGTCATACA 58.812 50.000 6.19 0.00 0.00 2.29
385 386 2.304751 AATGAACGTCGGGGTCATAC 57.695 50.000 8.09 0.00 0.00 2.39
386 387 3.337694 AAAATGAACGTCGGGGTCATA 57.662 42.857 8.09 0.00 0.00 2.15
387 388 2.194201 AAAATGAACGTCGGGGTCAT 57.806 45.000 0.00 2.59 0.00 3.06
388 389 2.037511 AGTAAAATGAACGTCGGGGTCA 59.962 45.455 0.00 0.00 0.00 4.02
389 390 2.691927 AGTAAAATGAACGTCGGGGTC 58.308 47.619 0.00 0.00 0.00 4.46
390 391 2.809696 CAAGTAAAATGAACGTCGGGGT 59.190 45.455 0.00 0.00 0.00 4.95
391 392 3.068560 TCAAGTAAAATGAACGTCGGGG 58.931 45.455 0.00 0.00 0.00 5.73
392 393 4.735662 TTCAAGTAAAATGAACGTCGGG 57.264 40.909 0.00 0.00 32.10 5.14
393 394 6.519761 CAGAATTCAAGTAAAATGAACGTCGG 59.480 38.462 8.44 0.00 39.43 4.79
394 395 7.069569 ACAGAATTCAAGTAAAATGAACGTCG 58.930 34.615 8.44 0.00 39.43 5.12
395 396 7.534239 GGACAGAATTCAAGTAAAATGAACGTC 59.466 37.037 8.44 0.00 39.43 4.34
396 397 7.360361 GGACAGAATTCAAGTAAAATGAACGT 58.640 34.615 8.44 0.00 39.43 3.99
397 398 6.519761 CGGACAGAATTCAAGTAAAATGAACG 59.480 38.462 8.44 1.95 39.43 3.95
398 399 7.360361 ACGGACAGAATTCAAGTAAAATGAAC 58.640 34.615 8.44 0.00 39.43 3.18
399 400 7.504924 ACGGACAGAATTCAAGTAAAATGAA 57.495 32.000 8.44 0.00 40.76 2.57
400 401 7.227711 TGAACGGACAGAATTCAAGTAAAATGA 59.772 33.333 8.44 0.00 29.56 2.57
401 402 7.359595 TGAACGGACAGAATTCAAGTAAAATG 58.640 34.615 8.44 0.00 29.56 2.32
402 403 7.504924 TGAACGGACAGAATTCAAGTAAAAT 57.495 32.000 8.44 0.00 29.56 1.82
403 404 6.928979 TGAACGGACAGAATTCAAGTAAAA 57.071 33.333 8.44 0.00 29.56 1.52
404 405 7.504924 AATGAACGGACAGAATTCAAGTAAA 57.495 32.000 8.44 0.00 36.03 2.01
405 406 7.504924 AAATGAACGGACAGAATTCAAGTAA 57.495 32.000 8.44 0.00 36.03 2.24
406 407 7.504924 AAAATGAACGGACAGAATTCAAGTA 57.495 32.000 8.44 0.00 36.03 2.24
407 408 6.391227 AAAATGAACGGACAGAATTCAAGT 57.609 33.333 8.44 5.73 36.03 3.16
408 409 7.359595 TGTAAAATGAACGGACAGAATTCAAG 58.640 34.615 8.44 2.21 36.03 3.02
409 410 7.012894 ACTGTAAAATGAACGGACAGAATTCAA 59.987 33.333 8.44 0.00 39.94 2.69
410 411 6.485313 ACTGTAAAATGAACGGACAGAATTCA 59.515 34.615 8.44 0.00 39.94 2.57
411 412 6.797033 CACTGTAAAATGAACGGACAGAATTC 59.203 38.462 7.30 0.00 39.94 2.17
412 413 6.262273 ACACTGTAAAATGAACGGACAGAATT 59.738 34.615 7.30 0.00 39.94 2.17
413 414 5.763204 ACACTGTAAAATGAACGGACAGAAT 59.237 36.000 7.30 0.00 39.94 2.40
414 415 5.120399 ACACTGTAAAATGAACGGACAGAA 58.880 37.500 7.30 0.00 39.94 3.02
415 416 4.699637 ACACTGTAAAATGAACGGACAGA 58.300 39.130 7.30 0.00 39.94 3.41
416 417 6.367695 TCATACACTGTAAAATGAACGGACAG 59.632 38.462 0.00 0.00 42.58 3.51
417 418 6.224584 TCATACACTGTAAAATGAACGGACA 58.775 36.000 0.00 0.00 0.00 4.02
418 419 6.588756 TCTCATACACTGTAAAATGAACGGAC 59.411 38.462 0.00 0.00 0.00 4.79
419 420 6.588756 GTCTCATACACTGTAAAATGAACGGA 59.411 38.462 0.00 0.00 0.00 4.69
420 421 6.183360 GGTCTCATACACTGTAAAATGAACGG 60.183 42.308 0.00 0.00 0.00 4.44
421 422 6.590292 AGGTCTCATACACTGTAAAATGAACG 59.410 38.462 0.00 0.00 0.00 3.95
422 423 7.907214 AGGTCTCATACACTGTAAAATGAAC 57.093 36.000 0.00 0.00 0.00 3.18
423 424 8.918202 AAAGGTCTCATACACTGTAAAATGAA 57.082 30.769 0.00 0.00 0.00 2.57
424 425 8.918202 AAAAGGTCTCATACACTGTAAAATGA 57.082 30.769 0.00 0.00 0.00 2.57
425 426 9.003658 AGAAAAGGTCTCATACACTGTAAAATG 57.996 33.333 0.00 0.00 0.00 2.32
428 429 9.706691 CTTAGAAAAGGTCTCATACACTGTAAA 57.293 33.333 0.00 0.00 37.84 2.01
429 430 9.085645 TCTTAGAAAAGGTCTCATACACTGTAA 57.914 33.333 0.00 0.00 37.84 2.41
430 431 8.645814 TCTTAGAAAAGGTCTCATACACTGTA 57.354 34.615 0.00 0.00 37.84 2.74
431 432 7.540474 TCTTAGAAAAGGTCTCATACACTGT 57.460 36.000 0.00 0.00 37.84 3.55
432 433 7.010923 GCATCTTAGAAAAGGTCTCATACACTG 59.989 40.741 0.00 0.00 37.84 3.66
433 434 7.044798 GCATCTTAGAAAAGGTCTCATACACT 58.955 38.462 0.00 0.00 37.84 3.55
434 435 6.818644 TGCATCTTAGAAAAGGTCTCATACAC 59.181 38.462 0.00 0.00 37.84 2.90
435 436 6.946340 TGCATCTTAGAAAAGGTCTCATACA 58.054 36.000 0.00 0.00 37.84 2.29
436 437 7.095857 CGATGCATCTTAGAAAAGGTCTCATAC 60.096 40.741 23.73 0.00 37.84 2.39
437 438 6.925718 CGATGCATCTTAGAAAAGGTCTCATA 59.074 38.462 23.73 0.00 37.84 2.15
438 439 5.757320 CGATGCATCTTAGAAAAGGTCTCAT 59.243 40.000 23.73 0.00 37.84 2.90
439 440 5.111989 CGATGCATCTTAGAAAAGGTCTCA 58.888 41.667 23.73 0.00 37.84 3.27
440 441 4.509600 CCGATGCATCTTAGAAAAGGTCTC 59.490 45.833 23.73 0.00 37.84 3.36
441 442 4.446371 CCGATGCATCTTAGAAAAGGTCT 58.554 43.478 23.73 0.00 40.71 3.85
442 443 3.002759 GCCGATGCATCTTAGAAAAGGTC 59.997 47.826 23.73 8.02 37.47 3.85
443 444 2.945668 GCCGATGCATCTTAGAAAAGGT 59.054 45.455 23.73 0.00 37.47 3.50
444 445 3.003068 CAGCCGATGCATCTTAGAAAAGG 59.997 47.826 23.73 15.38 41.13 3.11
445 446 3.624861 ACAGCCGATGCATCTTAGAAAAG 59.375 43.478 23.73 6.09 41.13 2.27
446 447 3.374988 CACAGCCGATGCATCTTAGAAAA 59.625 43.478 23.73 0.00 41.13 2.29
447 448 2.938451 CACAGCCGATGCATCTTAGAAA 59.062 45.455 23.73 0.00 41.13 2.52
448 449 2.554142 CACAGCCGATGCATCTTAGAA 58.446 47.619 23.73 0.00 41.13 2.10
449 450 1.807755 GCACAGCCGATGCATCTTAGA 60.808 52.381 23.73 0.00 42.88 2.10
450 451 0.585357 GCACAGCCGATGCATCTTAG 59.415 55.000 23.73 13.43 42.88 2.18
451 452 2.694065 GCACAGCCGATGCATCTTA 58.306 52.632 23.73 0.00 42.88 2.10
452 453 3.506108 GCACAGCCGATGCATCTT 58.494 55.556 23.73 7.22 42.88 2.40
457 458 2.327343 TTGAGTGCACAGCCGATGC 61.327 57.895 21.04 0.00 43.68 3.91
458 459 1.499056 GTTGAGTGCACAGCCGATG 59.501 57.895 21.04 0.00 0.00 3.84
459 460 2.029288 CGTTGAGTGCACAGCCGAT 61.029 57.895 21.04 0.00 0.00 4.18
460 461 2.661537 CGTTGAGTGCACAGCCGA 60.662 61.111 21.04 4.68 0.00 5.54
461 462 4.374702 GCGTTGAGTGCACAGCCG 62.375 66.667 21.04 15.69 0.00 5.52
462 463 4.374702 CGCGTTGAGTGCACAGCC 62.375 66.667 21.04 8.27 0.00 4.85
481 482 1.134560 GGATATACCGGAGATGCGTCC 59.865 57.143 9.46 7.27 0.00 4.79
482 483 2.563471 GGATATACCGGAGATGCGTC 57.437 55.000 9.46 0.00 0.00 5.19
493 494 4.335400 TTCGGGGTAAAACGGATATACC 57.665 45.455 0.00 0.00 38.68 2.73
494 495 5.540911 TCATTCGGGGTAAAACGGATATAC 58.459 41.667 0.00 0.00 0.00 1.47
495 496 5.804944 TCATTCGGGGTAAAACGGATATA 57.195 39.130 0.00 0.00 0.00 0.86
496 497 4.693042 TCATTCGGGGTAAAACGGATAT 57.307 40.909 0.00 0.00 0.00 1.63
497 498 4.190772 GTTCATTCGGGGTAAAACGGATA 58.809 43.478 0.00 0.00 0.00 2.59
498 499 3.011818 GTTCATTCGGGGTAAAACGGAT 58.988 45.455 0.00 0.00 0.00 4.18
499 500 2.425539 GTTCATTCGGGGTAAAACGGA 58.574 47.619 0.00 0.00 0.00 4.69
500 501 1.129064 CGTTCATTCGGGGTAAAACGG 59.871 52.381 0.00 0.00 36.70 4.44
501 502 1.464521 GCGTTCATTCGGGGTAAAACG 60.465 52.381 0.00 0.00 41.59 3.60
502 503 1.536331 TGCGTTCATTCGGGGTAAAAC 59.464 47.619 0.00 0.00 0.00 2.43
503 504 1.536331 GTGCGTTCATTCGGGGTAAAA 59.464 47.619 0.00 0.00 0.00 1.52
504 505 1.158434 GTGCGTTCATTCGGGGTAAA 58.842 50.000 0.00 0.00 0.00 2.01
505 506 0.674269 GGTGCGTTCATTCGGGGTAA 60.674 55.000 0.00 0.00 0.00 2.85
506 507 1.078988 GGTGCGTTCATTCGGGGTA 60.079 57.895 0.00 0.00 0.00 3.69
507 508 2.359478 GGTGCGTTCATTCGGGGT 60.359 61.111 0.00 0.00 0.00 4.95
508 509 3.131478 GGGTGCGTTCATTCGGGG 61.131 66.667 0.00 0.00 0.00 5.73
509 510 3.496131 CGGGTGCGTTCATTCGGG 61.496 66.667 0.00 0.00 0.00 5.14
510 511 3.496131 CCGGGTGCGTTCATTCGG 61.496 66.667 0.00 0.00 35.52 4.30
511 512 2.433491 TCCGGGTGCGTTCATTCG 60.433 61.111 0.00 0.00 0.00 3.34
512 513 1.635663 CTGTCCGGGTGCGTTCATTC 61.636 60.000 0.00 0.00 0.00 2.67
513 514 1.671054 CTGTCCGGGTGCGTTCATT 60.671 57.895 0.00 0.00 0.00 2.57
514 515 2.047274 CTGTCCGGGTGCGTTCAT 60.047 61.111 0.00 0.00 0.00 2.57
515 516 4.308458 CCTGTCCGGGTGCGTTCA 62.308 66.667 0.00 0.00 0.00 3.18
540 541 4.329545 TCCCACGCCAACTCCAGC 62.330 66.667 0.00 0.00 0.00 4.85
541 542 2.358737 GTCCCACGCCAACTCCAG 60.359 66.667 0.00 0.00 0.00 3.86
542 543 4.308458 CGTCCCACGCCAACTCCA 62.308 66.667 0.00 0.00 33.65 3.86
551 552 0.385473 GTCACAAAATGCGTCCCACG 60.385 55.000 0.00 0.00 45.88 4.94
552 553 0.665835 TGTCACAAAATGCGTCCCAC 59.334 50.000 0.00 0.00 0.00 4.61
553 554 0.665835 GTGTCACAAAATGCGTCCCA 59.334 50.000 0.00 0.00 0.00 4.37
554 555 0.039527 GGTGTCACAAAATGCGTCCC 60.040 55.000 5.12 0.00 0.00 4.46
555 556 0.385473 CGGTGTCACAAAATGCGTCC 60.385 55.000 5.12 0.00 0.00 4.79
559 560 1.463056 TCGATCGGTGTCACAAAATGC 59.537 47.619 16.41 0.00 0.00 3.56
563 564 0.320073 GGGTCGATCGGTGTCACAAA 60.320 55.000 16.41 0.00 0.00 2.83
567 568 2.348104 CCTGGGTCGATCGGTGTCA 61.348 63.158 16.41 8.06 0.00 3.58
616 621 1.191647 CGACCGTAATAAAGCGCATCC 59.808 52.381 11.47 0.00 0.00 3.51
678 695 1.453379 GATCTCGTCCTCCGTGGGA 60.453 63.158 0.00 0.00 37.94 4.37
679 696 2.491022 GGATCTCGTCCTCCGTGGG 61.491 68.421 0.00 0.00 44.16 4.61
680 697 3.121019 GGATCTCGTCCTCCGTGG 58.879 66.667 0.00 0.00 44.16 4.94
884 926 1.152419 TGTGTGTCTTCTCCGGGGA 60.152 57.895 0.00 0.00 0.00 4.81
886 928 0.038159 GTCTGTGTGTCTTCTCCGGG 60.038 60.000 0.00 0.00 0.00 5.73
904 946 4.079850 CTGGCTCCTGCTCTGCGT 62.080 66.667 0.00 0.00 39.59 5.24
945 987 3.036959 GGAGAGGGGGAGGGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
946 988 4.179599 GGGAGAGGGGGAGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
971 1042 0.109086 CTCGCTGTGGTTCTCGATGT 60.109 55.000 0.00 0.00 0.00 3.06
972 1043 0.171231 TCTCGCTGTGGTTCTCGATG 59.829 55.000 0.00 0.00 0.00 3.84
973 1044 0.171455 GTCTCGCTGTGGTTCTCGAT 59.829 55.000 0.00 0.00 0.00 3.59
974 1045 0.889638 AGTCTCGCTGTGGTTCTCGA 60.890 55.000 0.00 0.00 0.00 4.04
975 1046 0.455295 GAGTCTCGCTGTGGTTCTCG 60.455 60.000 0.00 0.00 0.00 4.04
976 1047 0.598562 TGAGTCTCGCTGTGGTTCTC 59.401 55.000 0.00 0.00 0.00 2.87
977 1048 0.315568 GTGAGTCTCGCTGTGGTTCT 59.684 55.000 6.14 0.00 0.00 3.01
978 1049 1.004277 CGTGAGTCTCGCTGTGGTTC 61.004 60.000 11.52 0.00 0.00 3.62
979 1050 1.007271 CGTGAGTCTCGCTGTGGTT 60.007 57.895 11.52 0.00 0.00 3.67
980 1051 1.857318 CTCGTGAGTCTCGCTGTGGT 61.857 60.000 11.52 0.00 0.00 4.16
981 1052 1.154131 CTCGTGAGTCTCGCTGTGG 60.154 63.158 11.52 0.00 0.00 4.17
982 1053 1.799519 GCTCGTGAGTCTCGCTGTG 60.800 63.158 11.52 7.22 0.00 3.66
983 1054 2.563942 GCTCGTGAGTCTCGCTGT 59.436 61.111 11.52 0.00 0.00 4.40
984 1055 2.575525 CGCTCGTGAGTCTCGCTG 60.576 66.667 11.52 6.43 0.00 5.18
985 1056 4.468615 GCGCTCGTGAGTCTCGCT 62.469 66.667 11.52 0.00 39.49 4.93
1105 1181 2.708255 CCTCGTAGGTCTCGTCGC 59.292 66.667 0.00 0.00 0.00 5.19
1220 1296 2.100603 GGAGCGAAGAGACGGACG 59.899 66.667 0.00 0.00 0.00 4.79
1221 1297 2.490685 GGGAGCGAAGAGACGGAC 59.509 66.667 0.00 0.00 0.00 4.79
1222 1298 3.132139 CGGGAGCGAAGAGACGGA 61.132 66.667 0.00 0.00 0.00 4.69
1258 1336 4.587189 AATAGGAGACGCGGGCGC 62.587 66.667 12.47 0.00 44.19 6.53
1259 1337 2.658593 CAATAGGAGACGCGGGCG 60.659 66.667 12.47 12.04 46.03 6.13
1261 1339 1.144057 AAGCAATAGGAGACGCGGG 59.856 57.895 12.47 0.00 0.00 6.13
1263 1341 0.460284 ACCAAGCAATAGGAGACGCG 60.460 55.000 3.53 3.53 0.00 6.01
1264 1342 1.398390 CAACCAAGCAATAGGAGACGC 59.602 52.381 0.00 0.00 0.00 5.19
1265 1343 1.398390 GCAACCAAGCAATAGGAGACG 59.602 52.381 0.00 0.00 0.00 4.18
1266 1344 2.680339 GAGCAACCAAGCAATAGGAGAC 59.320 50.000 0.00 0.00 36.85 3.36
1267 1345 2.356125 GGAGCAACCAAGCAATAGGAGA 60.356 50.000 0.00 0.00 38.79 3.71
1268 1346 2.019984 GGAGCAACCAAGCAATAGGAG 58.980 52.381 0.00 0.00 38.79 3.69
1269 1347 1.340991 GGGAGCAACCAAGCAATAGGA 60.341 52.381 2.58 0.00 41.20 2.94
1270 1348 1.106285 GGGAGCAACCAAGCAATAGG 58.894 55.000 2.58 0.00 41.20 2.57
1271 1349 1.106285 GGGGAGCAACCAAGCAATAG 58.894 55.000 2.58 0.00 41.20 1.73
1272 1350 0.704076 AGGGGAGCAACCAAGCAATA 59.296 50.000 2.58 0.00 41.20 1.90
1273 1351 0.613012 GAGGGGAGCAACCAAGCAAT 60.613 55.000 2.58 0.00 41.20 3.56
1274 1352 1.228552 GAGGGGAGCAACCAAGCAA 60.229 57.895 2.58 0.00 41.20 3.91
1275 1353 2.129555 GAGAGGGGAGCAACCAAGCA 62.130 60.000 2.58 0.00 41.20 3.91
1276 1354 1.377856 GAGAGGGGAGCAACCAAGC 60.378 63.158 2.58 0.00 41.20 4.01
1277 1355 0.251634 GAGAGAGGGGAGCAACCAAG 59.748 60.000 2.58 0.00 41.20 3.61
1278 1356 0.178891 AGAGAGAGGGGAGCAACCAA 60.179 55.000 2.58 0.00 41.20 3.67
1279 1357 0.616111 GAGAGAGAGGGGAGCAACCA 60.616 60.000 2.58 0.00 41.20 3.67
1280 1358 1.334384 GGAGAGAGAGGGGAGCAACC 61.334 65.000 0.00 0.00 38.08 3.77
1285 1363 2.520741 GCGGGAGAGAGAGGGGAG 60.521 72.222 0.00 0.00 0.00 4.30
1300 1378 1.891919 CTCCTCTCCTCTCCTCGCG 60.892 68.421 0.00 0.00 0.00 5.87
1308 1386 1.142060 TGTCGATCCTCTCCTCTCCTC 59.858 57.143 0.00 0.00 0.00 3.71
1310 1388 1.314730 GTGTCGATCCTCTCCTCTCC 58.685 60.000 0.00 0.00 0.00 3.71
1313 1391 0.383949 GCTGTGTCGATCCTCTCCTC 59.616 60.000 0.00 0.00 0.00 3.71
1314 1392 1.380403 CGCTGTGTCGATCCTCTCCT 61.380 60.000 0.00 0.00 0.00 3.69
1316 1394 0.028770 CTCGCTGTGTCGATCCTCTC 59.971 60.000 0.00 0.00 37.87 3.20
1317 1395 1.380403 CCTCGCTGTGTCGATCCTCT 61.380 60.000 0.00 0.00 37.87 3.69
1318 1396 1.064946 CCTCGCTGTGTCGATCCTC 59.935 63.158 0.00 0.00 37.87 3.71
1319 1397 1.378646 TCCTCGCTGTGTCGATCCT 60.379 57.895 0.00 0.00 37.87 3.24
1320 1398 1.064946 CTCCTCGCTGTGTCGATCC 59.935 63.158 0.00 0.00 37.87 3.36
1321 1399 1.587613 GCTCCTCGCTGTGTCGATC 60.588 63.158 0.00 0.00 37.87 3.69
1322 1400 2.492090 GCTCCTCGCTGTGTCGAT 59.508 61.111 0.00 0.00 37.87 3.59
1323 1401 4.103103 CGCTCCTCGCTGTGTCGA 62.103 66.667 0.00 0.00 36.13 4.20
1324 1402 4.103103 TCGCTCCTCGCTGTGTCG 62.103 66.667 0.00 0.00 38.27 4.35
1325 1403 2.202544 CTCGCTCCTCGCTGTGTC 60.203 66.667 0.00 0.00 38.27 3.67
1326 1404 3.753434 CCTCGCTCCTCGCTGTGT 61.753 66.667 0.00 0.00 38.27 3.72
1417 1506 2.103042 GCTGCGCGGATCAAGAACT 61.103 57.895 23.20 0.00 0.00 3.01
1477 1572 1.004745 GGCCTGGATTTCTGGAGAACA 59.995 52.381 0.00 0.00 36.68 3.18
1504 1599 1.508632 TTTCTCGGGAACAGAAAGCG 58.491 50.000 0.00 0.00 34.65 4.68
1535 1630 1.818674 GCCGTGGGAAATCAAGTCAAT 59.181 47.619 0.00 0.00 0.00 2.57
1560 1655 2.348666 CGGAAATGGATGTCAAGACGAC 59.651 50.000 0.00 0.00 45.61 4.34
1561 1656 2.028476 ACGGAAATGGATGTCAAGACGA 60.028 45.455 0.00 0.00 0.00 4.20
1562 1657 2.094258 CACGGAAATGGATGTCAAGACG 59.906 50.000 0.00 0.00 0.00 4.18
1568 1663 0.734889 CCAGCACGGAAATGGATGTC 59.265 55.000 0.00 0.00 36.09 3.06
1669 1764 0.029834 GCATCATGGCGGACATTGAC 59.970 55.000 0.00 0.00 37.84 3.18
2029 2124 0.614979 TCCCGGAGAAGAGGTTCCTG 60.615 60.000 0.73 0.00 32.48 3.86
2077 2172 1.394917 CGCTGCTTGAGGTCATTGTAC 59.605 52.381 0.00 0.00 0.00 2.90
2086 2181 3.207669 GCCATCCGCTGCTTGAGG 61.208 66.667 0.00 0.00 36.94 3.86
2118 2213 1.534959 TCTGAGACAGGCTGCTGGT 60.535 57.895 15.89 0.00 31.51 4.00
2232 2341 3.442625 CCTGCACACATGAGAATGTCAAT 59.557 43.478 0.00 0.00 39.19 2.57
2254 2363 1.447317 CCACCACACCACTGCTGTTC 61.447 60.000 0.00 0.00 0.00 3.18
2265 2374 0.693049 ATCCACCTTCTCCACCACAC 59.307 55.000 0.00 0.00 0.00 3.82
2331 2440 4.344865 TTCCTTGCCTCGCCACCC 62.345 66.667 0.00 0.00 0.00 4.61
2699 2809 3.624861 CACTGAGCAAACACTCTCAAGTT 59.375 43.478 0.00 0.00 38.68 2.66
2702 2812 3.541996 TCACTGAGCAAACACTCTCAA 57.458 42.857 0.00 0.00 38.68 3.02
2718 2829 8.695456 AGAAACCACAAATACTGAAAATTCACT 58.305 29.630 0.00 0.00 32.90 3.41
2728 2839 6.407202 AGGCTAGTAGAAACCACAAATACTG 58.593 40.000 0.00 0.00 0.00 2.74
2729 2840 6.622427 AGGCTAGTAGAAACCACAAATACT 57.378 37.500 0.00 0.00 0.00 2.12
2766 2998 9.098355 TCGACTGATTGGAATGTTCTTAAATAG 57.902 33.333 0.00 0.00 0.00 1.73
2921 3269 2.006888 CATCAAACTCGGGTACGCAAT 58.993 47.619 10.84 0.00 40.69 3.56
2924 3272 0.739813 AGCATCAAACTCGGGTACGC 60.740 55.000 0.00 0.00 40.69 4.42
2926 3274 2.380084 TCAGCATCAAACTCGGGTAC 57.620 50.000 0.00 0.00 0.00 3.34
2928 3276 3.845781 ATATCAGCATCAAACTCGGGT 57.154 42.857 0.00 0.00 0.00 5.28
2930 3278 5.295292 AGAACAATATCAGCATCAAACTCGG 59.705 40.000 0.00 0.00 0.00 4.63
2931 3279 6.183360 ACAGAACAATATCAGCATCAAACTCG 60.183 38.462 0.00 0.00 0.00 4.18
2946 3294 9.302345 GAACTCAGAAATCGATACAGAACAATA 57.698 33.333 0.00 0.00 0.00 1.90
2958 3306 7.154656 TCAAAGATCTTGAACTCAGAAATCGA 58.845 34.615 9.17 0.00 0.00 3.59
2961 3309 8.782144 GTTCTCAAAGATCTTGAACTCAGAAAT 58.218 33.333 21.36 0.00 35.51 2.17
2971 3392 6.586344 ACACTGAAGTTCTCAAAGATCTTGA 58.414 36.000 9.17 7.93 35.16 3.02
3012 3433 8.977412 TGAACATGTATAATAAGGAGACACTGA 58.023 33.333 0.00 0.00 0.00 3.41
3030 3451 9.520204 GCACATTATTTTAGCTTATGAACATGT 57.480 29.630 0.00 0.00 0.00 3.21
3113 3534 4.411927 TGGGCAAAATATACACCACAAGT 58.588 39.130 0.00 0.00 0.00 3.16
3117 3538 4.499019 CCGAATGGGCAAAATATACACCAC 60.499 45.833 0.00 0.00 0.00 4.16
3147 3569 4.256110 TGAGACCAAACATGCTACTGATG 58.744 43.478 0.00 0.00 0.00 3.07
3164 3586 2.320367 GTCACAGTGACGACATGAGAC 58.680 52.381 17.96 1.15 37.67 3.36
3242 3666 4.136796 GGAATTAGTGCCACATATGCAGA 58.863 43.478 1.58 0.00 39.87 4.26
3243 3667 3.884693 TGGAATTAGTGCCACATATGCAG 59.115 43.478 1.58 0.00 39.87 4.41
3244 3668 3.895998 TGGAATTAGTGCCACATATGCA 58.104 40.909 1.58 0.00 36.12 3.96
3245 3669 5.221303 ACAATGGAATTAGTGCCACATATGC 60.221 40.000 1.58 0.00 36.92 3.14
3246 3670 6.210796 CACAATGGAATTAGTGCCACATATG 58.789 40.000 0.00 0.00 36.92 1.78
3247 3671 5.221303 GCACAATGGAATTAGTGCCACATAT 60.221 40.000 5.16 0.00 46.19 1.78
3248 3672 4.097741 GCACAATGGAATTAGTGCCACATA 59.902 41.667 5.16 0.00 46.19 2.29
3249 3673 3.119029 GCACAATGGAATTAGTGCCACAT 60.119 43.478 5.16 0.00 46.19 3.21
3265 3689 2.076100 CAGTACACGGTCATGCACAAT 58.924 47.619 0.00 0.00 0.00 2.71
3266 3690 1.202592 ACAGTACACGGTCATGCACAA 60.203 47.619 0.00 0.00 0.00 3.33
3267 3691 0.391228 ACAGTACACGGTCATGCACA 59.609 50.000 0.00 0.00 0.00 4.57
3268 3692 2.357327 TACAGTACACGGTCATGCAC 57.643 50.000 0.00 0.00 0.00 4.57
3269 3693 3.603158 ATTACAGTACACGGTCATGCA 57.397 42.857 0.00 0.00 0.00 3.96
3270 3694 4.939509 AAATTACAGTACACGGTCATGC 57.060 40.909 0.00 0.00 0.00 4.06
3271 3695 6.073494 TGACAAAATTACAGTACACGGTCATG 60.073 38.462 0.00 0.00 0.00 3.07
3302 3733 7.499292 TGGAGCCAAACATTTATCATAAATGG 58.501 34.615 26.81 15.97 40.84 3.16
3321 3752 6.767902 TGATCAAGTGAAGTATAAATGGAGCC 59.232 38.462 0.00 0.00 0.00 4.70
3468 4119 6.358118 TGCTATTTACGGATTCACAACATC 57.642 37.500 0.00 0.00 0.00 3.06
3483 4134 7.065803 GGTTAGCTTGTGTTGAGATGCTATTTA 59.934 37.037 0.00 0.00 30.88 1.40
3589 4256 3.728385 AAGGTTGCCTCTTAGCATCTT 57.272 42.857 0.00 0.00 43.64 2.40
3648 4318 1.254284 CCACTGGAGCTCTCTTCGGT 61.254 60.000 14.64 4.97 37.94 4.69
4004 4689 9.646427 ACTAAGATGAAGAAGAACAGTAACATC 57.354 33.333 0.00 0.00 34.88 3.06
4011 4696 8.768957 TCATTCACTAAGATGAAGAAGAACAG 57.231 34.615 0.00 0.00 41.76 3.16
4041 4726 7.451731 TTCAGTAAGATAACTGGGATTGGAT 57.548 36.000 4.32 0.00 45.69 3.41
4042 4727 6.884472 TTCAGTAAGATAACTGGGATTGGA 57.116 37.500 4.32 0.00 45.69 3.53
4044 4729 6.016777 GGCATTCAGTAAGATAACTGGGATTG 60.017 42.308 4.32 0.06 45.69 2.67
4045 4730 6.064717 GGCATTCAGTAAGATAACTGGGATT 58.935 40.000 4.32 0.00 45.69 3.01
4052 4737 7.414540 CCAGAACAAGGCATTCAGTAAGATAAC 60.415 40.741 0.00 0.00 0.00 1.89
4080 4765 9.173939 CTTTTAAGTATCAGTGCAAGAAAACAG 57.826 33.333 0.00 0.00 0.00 3.16
4089 4774 4.688879 CCGTGACTTTTAAGTATCAGTGCA 59.311 41.667 0.00 0.00 39.88 4.57
4092 4777 5.930569 GGTTCCGTGACTTTTAAGTATCAGT 59.069 40.000 0.00 0.00 39.88 3.41
4096 4781 7.879160 TGTATTGGTTCCGTGACTTTTAAGTAT 59.121 33.333 0.00 0.00 39.88 2.12
4102 4787 4.457466 AGTGTATTGGTTCCGTGACTTTT 58.543 39.130 0.00 0.00 0.00 2.27
4103 4788 4.081322 AGTGTATTGGTTCCGTGACTTT 57.919 40.909 0.00 0.00 0.00 2.66
4123 4808 4.067896 ACAACTGTGTATCTGCCTCAAAG 58.932 43.478 0.00 0.00 35.72 2.77
4142 4836 3.357166 GGCAACAATGGTTTACGACAA 57.643 42.857 0.00 0.00 34.21 3.18
4485 5179 1.072159 CCTCCGCATTCATCTCCCC 59.928 63.158 0.00 0.00 0.00 4.81
4486 5180 0.181350 AACCTCCGCATTCATCTCCC 59.819 55.000 0.00 0.00 0.00 4.30
4487 5181 1.303309 CAACCTCCGCATTCATCTCC 58.697 55.000 0.00 0.00 0.00 3.71
4488 5182 2.029838 ACAACCTCCGCATTCATCTC 57.970 50.000 0.00 0.00 0.00 2.75
4489 5183 3.845781 ATACAACCTCCGCATTCATCT 57.154 42.857 0.00 0.00 0.00 2.90
4490 5184 3.997021 CCTATACAACCTCCGCATTCATC 59.003 47.826 0.00 0.00 0.00 2.92
4491 5185 3.244561 CCCTATACAACCTCCGCATTCAT 60.245 47.826 0.00 0.00 0.00 2.57
4492 5186 2.104111 CCCTATACAACCTCCGCATTCA 59.896 50.000 0.00 0.00 0.00 2.57
4493 5187 2.550208 CCCCTATACAACCTCCGCATTC 60.550 54.545 0.00 0.00 0.00 2.67
4494 5188 1.420138 CCCCTATACAACCTCCGCATT 59.580 52.381 0.00 0.00 0.00 3.56
4495 5189 1.056660 CCCCTATACAACCTCCGCAT 58.943 55.000 0.00 0.00 0.00 4.73
4496 5190 0.031917 TCCCCTATACAACCTCCGCA 60.032 55.000 0.00 0.00 0.00 5.69
4497 5191 0.680061 CTCCCCTATACAACCTCCGC 59.320 60.000 0.00 0.00 0.00 5.54
4498 5192 1.133262 TCCTCCCCTATACAACCTCCG 60.133 57.143 0.00 0.00 0.00 4.63
4499 5193 2.610873 CTCCTCCCCTATACAACCTCC 58.389 57.143 0.00 0.00 0.00 4.30
4500 5194 2.610873 CCTCCTCCCCTATACAACCTC 58.389 57.143 0.00 0.00 0.00 3.85
4501 5195 1.223337 CCCTCCTCCCCTATACAACCT 59.777 57.143 0.00 0.00 0.00 3.50
4502 5196 1.730851 CCCTCCTCCCCTATACAACC 58.269 60.000 0.00 0.00 0.00 3.77
4503 5197 1.730851 CCCCTCCTCCCCTATACAAC 58.269 60.000 0.00 0.00 0.00 3.32
4504 5198 0.571236 CCCCCTCCTCCCCTATACAA 59.429 60.000 0.00 0.00 0.00 2.41
4505 5199 2.044777 GCCCCCTCCTCCCCTATACA 62.045 65.000 0.00 0.00 0.00 2.29
4506 5200 1.229561 GCCCCCTCCTCCCCTATAC 60.230 68.421 0.00 0.00 0.00 1.47
4507 5201 2.865147 CGCCCCCTCCTCCCCTATA 61.865 68.421 0.00 0.00 0.00 1.31
4508 5202 4.256278 CGCCCCCTCCTCCCCTAT 62.256 72.222 0.00 0.00 0.00 2.57
4567 5261 9.632638 AAATGTTAGAGCAACTGGATTATGTAT 57.367 29.630 0.00 0.00 38.05 2.29
4569 5263 7.944729 AAATGTTAGAGCAACTGGATTATGT 57.055 32.000 0.00 0.00 38.05 2.29
4570 5264 8.562892 CCTAAATGTTAGAGCAACTGGATTATG 58.437 37.037 0.00 0.00 38.05 1.90
4571 5265 7.229506 GCCTAAATGTTAGAGCAACTGGATTAT 59.770 37.037 0.00 0.00 38.05 1.28
4572 5266 6.542370 GCCTAAATGTTAGAGCAACTGGATTA 59.458 38.462 0.00 0.00 38.05 1.75
4573 5267 5.358160 GCCTAAATGTTAGAGCAACTGGATT 59.642 40.000 0.00 0.00 38.05 3.01
4574 5268 4.884164 GCCTAAATGTTAGAGCAACTGGAT 59.116 41.667 0.00 0.00 38.05 3.41
4575 5269 4.019321 AGCCTAAATGTTAGAGCAACTGGA 60.019 41.667 9.58 0.00 38.05 3.86
4576 5270 4.095483 CAGCCTAAATGTTAGAGCAACTGG 59.905 45.833 9.58 0.00 38.05 4.00
4577 5271 4.697352 ACAGCCTAAATGTTAGAGCAACTG 59.303 41.667 9.58 0.00 38.05 3.16
4578 5272 4.911390 ACAGCCTAAATGTTAGAGCAACT 58.089 39.130 9.58 0.00 38.05 3.16
4579 5273 5.412904 AGAACAGCCTAAATGTTAGAGCAAC 59.587 40.000 9.58 0.00 40.86 4.17
4580 5274 5.560724 AGAACAGCCTAAATGTTAGAGCAA 58.439 37.500 9.58 0.00 40.86 3.91
4581 5275 5.165961 AGAACAGCCTAAATGTTAGAGCA 57.834 39.130 9.58 0.00 40.86 4.26
4582 5276 6.594159 TGTAAGAACAGCCTAAATGTTAGAGC 59.406 38.462 0.00 0.00 40.86 4.09
4601 5301 9.886132 GTCTTAATATCTGGAACCTTTGTAAGA 57.114 33.333 0.00 0.00 0.00 2.10
4606 5306 8.525290 AATGGTCTTAATATCTGGAACCTTTG 57.475 34.615 0.00 0.00 0.00 2.77
4673 5375 7.397892 TTGTAAACTTTTGAACATGTCCTCA 57.602 32.000 0.00 0.00 0.00 3.86
4678 5380 8.174422 GCAACAATTGTAAACTTTTGAACATGT 58.826 29.630 12.39 0.00 0.00 3.21
4681 5383 7.658179 TGCAACAATTGTAAACTTTTGAACA 57.342 28.000 12.39 0.00 0.00 3.18
4695 5397 2.666508 GAGCTGAGCAATGCAACAATTG 59.333 45.455 7.39 3.24 39.98 2.32
4703 5405 2.544686 CTCATGTAGAGCTGAGCAATGC 59.455 50.000 7.39 0.00 37.59 3.56
4727 5429 5.992217 AGAGCTTGAGAAACGAACAAGTATT 59.008 36.000 0.00 0.00 41.73 1.89
4731 5433 3.557595 ACAGAGCTTGAGAAACGAACAAG 59.442 43.478 0.00 0.00 42.33 3.16
4799 5501 3.054875 TGTCTCTGCCTCAAATGCATACT 60.055 43.478 0.00 0.00 38.22 2.12
4833 5535 4.284490 AGAGATTCAGTTGCTAACACCTCA 59.716 41.667 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.