Multiple sequence alignment - TraesCS4A01G011800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G011800 chr4A 100.000 1576 0 0 1 1576 6818878 6817303 0.000000e+00 2911.0
1 TraesCS4A01G011800 chr4A 100.000 442 0 0 1877 2318 6817002 6816561 0.000000e+00 817.0
2 TraesCS4A01G011800 chr4A 94.268 314 15 3 2005 2318 537288116 537287806 5.790000e-131 477.0
3 TraesCS4A01G011800 chr4D 92.765 1244 50 17 369 1576 462797696 462796457 0.000000e+00 1762.0
4 TraesCS4A01G011800 chr4B 93.020 831 41 13 752 1576 578052336 578053155 0.000000e+00 1197.0
5 TraesCS4A01G011800 chr4B 86.629 531 37 13 244 751 578051668 578052187 7.240000e-155 556.0
6 TraesCS4A01G011800 chr4B 83.846 130 7 4 1890 2008 578053184 578053310 6.770000e-21 111.0
7 TraesCS4A01G011800 chr7D 94.340 318 14 3 2005 2318 548476583 548476266 3.460000e-133 484.0
8 TraesCS4A01G011800 chr7D 94.551 312 13 3 2005 2312 127559173 127559484 1.610000e-131 479.0
9 TraesCS4A01G011800 chr7D 94.534 311 13 3 2008 2318 562059663 562059969 5.790000e-131 477.0
10 TraesCS4A01G011800 chr7D 95.455 88 4 0 2 89 203172098 203172185 8.630000e-30 141.0
11 TraesCS4A01G011800 chr2A 93.711 318 16 3 2005 2318 580045918 580045601 7.500000e-130 473.0
12 TraesCS4A01G011800 chr1D 93.968 315 14 4 2005 2318 131289266 131288956 2.700000e-129 472.0
13 TraesCS4A01G011800 chr5D 93.910 312 16 2 2007 2318 35155175 35154867 3.490000e-128 468.0
14 TraesCS4A01G011800 chr5D 93.631 314 17 3 2005 2318 483524012 483523702 1.250000e-127 466.0
15 TraesCS4A01G011800 chr5D 95.413 109 4 1 146 253 8703339 8703231 3.060000e-39 172.0
16 TraesCS4A01G011800 chr6A 93.631 314 17 2 2008 2318 367772699 367773012 1.250000e-127 466.0
17 TraesCS4A01G011800 chr7A 95.327 107 3 2 146 252 35179319 35179215 3.960000e-38 169.0
18 TraesCS4A01G011800 chr7A 95.283 106 5 0 146 251 220843770 220843875 3.960000e-38 169.0
19 TraesCS4A01G011800 chr7A 94.545 110 5 1 146 254 698746159 698746050 3.960000e-38 169.0
20 TraesCS4A01G011800 chr7A 94.495 109 4 2 146 254 462018769 462018663 1.420000e-37 167.0
21 TraesCS4A01G011800 chr7A 100.000 46 0 0 101 146 20211184 20211229 4.100000e-13 86.1
22 TraesCS4A01G011800 chr3D 96.117 103 4 0 146 248 484286098 484286200 3.960000e-38 169.0
23 TraesCS4A01G011800 chr3D 92.857 98 4 1 2 96 553333701 553333604 3.110000e-29 139.0
24 TraesCS4A01G011800 chr3A 96.970 99 3 0 146 244 389052510 389052608 1.420000e-37 167.0
25 TraesCS4A01G011800 chr1B 94.495 109 5 1 146 253 182642059 182641951 1.420000e-37 167.0
26 TraesCS4A01G011800 chr1B 93.814 97 4 1 2 96 11409833 11409737 6.680000e-31 145.0
27 TraesCS4A01G011800 chr1B 93.814 97 4 1 2 96 15906411 15906507 6.680000e-31 145.0
28 TraesCS4A01G011800 chr1B 92.857 98 4 1 2 96 40601302 40601399 3.110000e-29 139.0
29 TraesCS4A01G011800 chr6D 91.597 119 7 3 146 263 450351668 450351784 6.630000e-36 161.0
30 TraesCS4A01G011800 chr3B 94.231 104 5 1 145 247 782851068 782850965 8.570000e-35 158.0
31 TraesCS4A01G011800 chr3B 94.898 98 2 1 2 96 101788677 101788580 1.430000e-32 150.0
32 TraesCS4A01G011800 chr3B 93.000 100 6 1 145 243 22082075 22082174 6.680000e-31 145.0
33 TraesCS4A01G011800 chr3B 91.837 98 5 1 2 96 606205545 606205642 1.440000e-27 134.0
34 TraesCS4A01G011800 chr5B 92.857 98 4 1 2 96 577101280 577101183 3.110000e-29 139.0
35 TraesCS4A01G011800 chr5B 97.674 43 0 1 104 146 675063517 675063476 3.190000e-09 73.1
36 TraesCS4A01G011800 chr6B 91.753 97 6 1 2 96 28017451 28017355 1.440000e-27 134.0
37 TraesCS4A01G011800 chr7B 86.667 60 8 0 244 303 652989266 652989325 1.490000e-07 67.6
38 TraesCS4A01G011800 chr7B 85.000 60 9 0 244 303 652261400 652261459 6.920000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G011800 chr4A 6816561 6818878 2317 True 1864.000000 2911 100.000000 1 2318 2 chr4A.!!$R2 2317
1 TraesCS4A01G011800 chr4D 462796457 462797696 1239 True 1762.000000 1762 92.765000 369 1576 1 chr4D.!!$R1 1207
2 TraesCS4A01G011800 chr4B 578051668 578053310 1642 False 621.333333 1197 87.831667 244 2008 3 chr4B.!!$F1 1764

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
352 353 0.179018 ATAGGCGGCCTTCATGAACC 60.179 55.0 29.02 4.48 34.61 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2050 2268 0.037605 GGTTTCACGGTCGAGATGGT 60.038 55.0 0.0 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.365105 CCCTAAGGCCACCGGAGA 60.365 66.667 9.46 0.00 0.00 3.71
20 21 1.766461 CCCTAAGGCCACCGGAGAT 60.766 63.158 9.46 0.00 0.00 2.75
21 22 1.447643 CCTAAGGCCACCGGAGATG 59.552 63.158 9.46 0.00 0.00 2.90
22 23 1.447643 CTAAGGCCACCGGAGATGG 59.552 63.158 9.46 6.89 0.00 3.51
23 24 2.044806 CTAAGGCCACCGGAGATGGG 62.045 65.000 9.46 2.12 0.00 4.00
24 25 2.539277 TAAGGCCACCGGAGATGGGA 62.539 60.000 9.46 0.00 0.00 4.37
25 26 4.176752 GGCCACCGGAGATGGGAC 62.177 72.222 9.46 0.00 0.00 4.46
26 27 4.530857 GCCACCGGAGATGGGACG 62.531 72.222 9.46 0.00 0.00 4.79
31 32 3.900892 CGGAGATGGGACGGACCG 61.901 72.222 13.61 13.61 40.11 4.79
32 33 2.441532 GGAGATGGGACGGACCGA 60.442 66.667 23.38 0.00 40.11 4.69
33 34 2.783288 GGAGATGGGACGGACCGAC 61.783 68.421 23.38 15.26 40.11 4.79
34 35 3.122250 GAGATGGGACGGACCGACG 62.122 68.421 23.38 0.00 40.11 5.12
35 36 4.867599 GATGGGACGGACCGACGC 62.868 72.222 23.38 23.00 40.11 5.19
61 62 2.034221 GCGGGAGGCAGAAAACCT 59.966 61.111 0.00 0.00 42.87 3.50
62 63 1.603739 GCGGGAGGCAGAAAACCTT 60.604 57.895 0.00 0.00 42.87 3.50
63 64 0.322187 GCGGGAGGCAGAAAACCTTA 60.322 55.000 0.00 0.00 42.87 2.69
64 65 1.739067 CGGGAGGCAGAAAACCTTAG 58.261 55.000 0.00 0.00 37.77 2.18
65 66 1.003233 CGGGAGGCAGAAAACCTTAGT 59.997 52.381 0.00 0.00 37.77 2.24
66 67 2.552373 CGGGAGGCAGAAAACCTTAGTT 60.552 50.000 0.00 0.00 37.77 2.24
68 69 3.255888 GGGAGGCAGAAAACCTTAGTTTG 59.744 47.826 0.00 0.00 45.54 2.93
69 70 3.255888 GGAGGCAGAAAACCTTAGTTTGG 59.744 47.826 0.00 0.00 45.54 3.28
70 71 4.142038 GAGGCAGAAAACCTTAGTTTGGA 58.858 43.478 0.00 0.00 45.54 3.53
71 72 4.145052 AGGCAGAAAACCTTAGTTTGGAG 58.855 43.478 0.00 0.00 45.54 3.86
72 73 3.255888 GGCAGAAAACCTTAGTTTGGAGG 59.744 47.826 0.00 0.00 45.54 4.30
73 74 3.305403 GCAGAAAACCTTAGTTTGGAGGC 60.305 47.826 0.00 0.00 45.54 4.70
74 75 3.058224 CAGAAAACCTTAGTTTGGAGGCG 60.058 47.826 0.00 0.00 45.54 5.52
75 76 1.905637 AAACCTTAGTTTGGAGGCGG 58.094 50.000 0.00 0.00 44.57 6.13
76 77 0.608308 AACCTTAGTTTGGAGGCGGC 60.608 55.000 0.00 0.00 36.48 6.53
77 78 2.106683 CCTTAGTTTGGAGGCGGCG 61.107 63.158 0.51 0.51 0.00 6.46
78 79 2.046700 TTAGTTTGGAGGCGGCGG 60.047 61.111 9.78 0.00 0.00 6.13
79 80 4.770874 TAGTTTGGAGGCGGCGGC 62.771 66.667 27.24 27.24 38.90 6.53
92 93 2.046314 GCGGCTGCCTAGGTCAAA 60.046 61.111 17.92 0.00 33.98 2.69
93 94 2.109126 GCGGCTGCCTAGGTCAAAG 61.109 63.158 17.92 4.70 33.98 2.77
94 95 1.450312 CGGCTGCCTAGGTCAAAGG 60.450 63.158 17.92 0.00 37.17 3.11
95 96 1.685820 GGCTGCCTAGGTCAAAGGT 59.314 57.895 12.43 0.00 36.43 3.50
96 97 0.393132 GGCTGCCTAGGTCAAAGGTC 60.393 60.000 12.43 0.00 36.43 3.85
97 98 0.615850 GCTGCCTAGGTCAAAGGTCT 59.384 55.000 11.31 0.00 36.43 3.85
98 99 1.831736 GCTGCCTAGGTCAAAGGTCTA 59.168 52.381 11.31 0.00 36.43 2.59
99 100 2.159028 GCTGCCTAGGTCAAAGGTCTAG 60.159 54.545 11.31 0.00 36.43 2.43
100 101 3.100671 CTGCCTAGGTCAAAGGTCTAGT 58.899 50.000 11.31 0.00 36.43 2.57
101 102 3.515901 CTGCCTAGGTCAAAGGTCTAGTT 59.484 47.826 11.31 0.00 36.43 2.24
102 103 3.514309 TGCCTAGGTCAAAGGTCTAGTTC 59.486 47.826 11.31 0.00 36.43 3.01
103 104 3.770388 GCCTAGGTCAAAGGTCTAGTTCT 59.230 47.826 11.31 0.00 36.43 3.01
104 105 4.142116 GCCTAGGTCAAAGGTCTAGTTCTC 60.142 50.000 11.31 0.00 36.43 2.87
105 106 5.017490 CCTAGGTCAAAGGTCTAGTTCTCA 58.983 45.833 0.00 0.00 31.21 3.27
106 107 5.659079 CCTAGGTCAAAGGTCTAGTTCTCAT 59.341 44.000 0.00 0.00 31.21 2.90
107 108 5.669164 AGGTCAAAGGTCTAGTTCTCATC 57.331 43.478 0.00 0.00 0.00 2.92
108 109 5.337788 AGGTCAAAGGTCTAGTTCTCATCT 58.662 41.667 0.00 0.00 0.00 2.90
109 110 5.782845 AGGTCAAAGGTCTAGTTCTCATCTT 59.217 40.000 0.00 0.00 0.00 2.40
110 111 6.271159 AGGTCAAAGGTCTAGTTCTCATCTTT 59.729 38.462 0.00 0.00 0.00 2.52
111 112 6.937465 GGTCAAAGGTCTAGTTCTCATCTTTT 59.063 38.462 0.00 0.00 0.00 2.27
112 113 7.445707 GGTCAAAGGTCTAGTTCTCATCTTTTT 59.554 37.037 0.00 0.00 0.00 1.94
134 135 8.976986 TTTTTACTGAACCTCTATAAGTCGAC 57.023 34.615 7.70 7.70 0.00 4.20
135 136 7.934855 TTTACTGAACCTCTATAAGTCGACT 57.065 36.000 13.58 13.58 0.00 4.18
136 137 7.934855 TTACTGAACCTCTATAAGTCGACTT 57.065 36.000 31.70 31.70 39.85 3.01
137 138 6.439675 ACTGAACCTCTATAAGTCGACTTC 57.560 41.667 32.86 16.50 37.40 3.01
138 139 6.181908 ACTGAACCTCTATAAGTCGACTTCT 58.818 40.000 32.86 25.23 37.40 2.85
139 140 6.660094 ACTGAACCTCTATAAGTCGACTTCTT 59.340 38.462 32.86 22.98 37.40 2.52
140 141 6.853720 TGAACCTCTATAAGTCGACTTCTTG 58.146 40.000 32.86 23.10 37.40 3.02
141 142 5.251601 ACCTCTATAAGTCGACTTCTTGC 57.748 43.478 32.86 0.00 37.40 4.01
142 143 4.951094 ACCTCTATAAGTCGACTTCTTGCT 59.049 41.667 32.86 12.22 37.40 3.91
143 144 5.066764 ACCTCTATAAGTCGACTTCTTGCTC 59.933 44.000 32.86 0.00 37.40 4.26
144 145 5.298276 CCTCTATAAGTCGACTTCTTGCTCT 59.702 44.000 32.86 10.68 37.40 4.09
145 146 6.483974 CCTCTATAAGTCGACTTCTTGCTCTA 59.516 42.308 32.86 14.41 37.40 2.43
146 147 7.012515 CCTCTATAAGTCGACTTCTTGCTCTAA 59.987 40.741 32.86 13.68 37.40 2.10
147 148 7.921787 TCTATAAGTCGACTTCTTGCTCTAAG 58.078 38.462 32.86 15.64 37.40 2.18
148 149 3.859411 AGTCGACTTCTTGCTCTAAGG 57.141 47.619 13.58 0.00 37.01 2.69
149 150 3.422796 AGTCGACTTCTTGCTCTAAGGA 58.577 45.455 13.58 0.00 37.01 3.36
150 151 3.442273 AGTCGACTTCTTGCTCTAAGGAG 59.558 47.826 13.58 0.00 45.97 3.69
151 152 3.440872 GTCGACTTCTTGCTCTAAGGAGA 59.559 47.826 8.70 0.00 43.66 3.71
152 153 4.097286 GTCGACTTCTTGCTCTAAGGAGAT 59.903 45.833 8.70 0.00 43.66 2.75
153 154 4.097135 TCGACTTCTTGCTCTAAGGAGATG 59.903 45.833 2.13 0.00 43.66 2.90
154 155 4.692228 GACTTCTTGCTCTAAGGAGATGG 58.308 47.826 2.13 0.00 43.66 3.51
155 156 4.357325 ACTTCTTGCTCTAAGGAGATGGA 58.643 43.478 2.13 0.00 43.66 3.41
156 157 4.161377 ACTTCTTGCTCTAAGGAGATGGAC 59.839 45.833 2.13 0.00 43.66 4.02
157 158 3.034635 TCTTGCTCTAAGGAGATGGACC 58.965 50.000 0.00 0.00 41.86 4.46
158 159 2.856760 TGCTCTAAGGAGATGGACCT 57.143 50.000 0.00 0.00 41.86 3.85
159 160 3.973472 TGCTCTAAGGAGATGGACCTA 57.027 47.619 0.00 0.00 41.86 3.08
160 161 4.477536 TGCTCTAAGGAGATGGACCTAT 57.522 45.455 0.00 0.00 41.86 2.57
161 162 4.820775 TGCTCTAAGGAGATGGACCTATT 58.179 43.478 0.00 0.00 41.86 1.73
162 163 4.590647 TGCTCTAAGGAGATGGACCTATTG 59.409 45.833 0.00 0.00 41.86 1.90
163 164 4.591072 GCTCTAAGGAGATGGACCTATTGT 59.409 45.833 0.00 0.00 41.86 2.71
164 165 5.510520 GCTCTAAGGAGATGGACCTATTGTG 60.511 48.000 0.00 0.00 41.86 3.33
165 166 4.901849 TCTAAGGAGATGGACCTATTGTGG 59.098 45.833 0.00 0.00 36.67 4.17
166 167 3.136641 AGGAGATGGACCTATTGTGGT 57.863 47.619 0.00 0.00 44.10 4.16
167 168 9.090416 CTCTAAGGAGATGGACCTATTGTGGTC 62.090 48.148 5.21 5.21 46.36 4.02
179 180 7.266905 ACCTATTGTGGTCTTAAGTAATGGT 57.733 36.000 1.63 5.45 34.86 3.55
180 181 7.696017 ACCTATTGTGGTCTTAAGTAATGGTT 58.304 34.615 1.63 0.00 34.86 3.67
181 182 7.610305 ACCTATTGTGGTCTTAAGTAATGGTTG 59.390 37.037 1.63 0.00 34.86 3.77
182 183 7.610305 CCTATTGTGGTCTTAAGTAATGGTTGT 59.390 37.037 1.63 0.00 0.00 3.32
183 184 7.833285 ATTGTGGTCTTAAGTAATGGTTGTT 57.167 32.000 1.63 0.00 0.00 2.83
184 185 6.627395 TGTGGTCTTAAGTAATGGTTGTTG 57.373 37.500 1.63 0.00 0.00 3.33
185 186 6.358178 TGTGGTCTTAAGTAATGGTTGTTGA 58.642 36.000 1.63 0.00 0.00 3.18
186 187 6.485313 TGTGGTCTTAAGTAATGGTTGTTGAG 59.515 38.462 1.63 0.00 0.00 3.02
187 188 6.485648 GTGGTCTTAAGTAATGGTTGTTGAGT 59.514 38.462 1.63 0.00 0.00 3.41
188 189 7.012989 GTGGTCTTAAGTAATGGTTGTTGAGTT 59.987 37.037 1.63 0.00 0.00 3.01
189 190 8.212312 TGGTCTTAAGTAATGGTTGTTGAGTTA 58.788 33.333 1.63 0.00 0.00 2.24
190 191 9.059260 GGTCTTAAGTAATGGTTGTTGAGTTAA 57.941 33.333 1.63 0.00 0.00 2.01
194 195 6.803154 AGTAATGGTTGTTGAGTTAAGAGC 57.197 37.500 0.00 0.00 0.00 4.09
195 196 6.296026 AGTAATGGTTGTTGAGTTAAGAGCA 58.704 36.000 0.00 0.00 0.00 4.26
196 197 6.942576 AGTAATGGTTGTTGAGTTAAGAGCAT 59.057 34.615 0.00 0.00 0.00 3.79
197 198 5.633830 ATGGTTGTTGAGTTAAGAGCATG 57.366 39.130 0.00 0.00 0.00 4.06
198 199 4.460263 TGGTTGTTGAGTTAAGAGCATGT 58.540 39.130 0.00 0.00 0.00 3.21
199 200 4.275689 TGGTTGTTGAGTTAAGAGCATGTG 59.724 41.667 0.00 0.00 0.00 3.21
200 201 4.275936 GGTTGTTGAGTTAAGAGCATGTGT 59.724 41.667 0.00 0.00 0.00 3.72
201 202 5.221048 GGTTGTTGAGTTAAGAGCATGTGTT 60.221 40.000 0.00 0.00 0.00 3.32
202 203 6.017440 GGTTGTTGAGTTAAGAGCATGTGTTA 60.017 38.462 0.00 0.00 0.00 2.41
203 204 7.308589 GGTTGTTGAGTTAAGAGCATGTGTTAT 60.309 37.037 0.00 0.00 0.00 1.89
204 205 7.132694 TGTTGAGTTAAGAGCATGTGTTATG 57.867 36.000 0.00 0.00 0.00 1.90
205 206 6.710295 TGTTGAGTTAAGAGCATGTGTTATGT 59.290 34.615 0.00 0.00 0.00 2.29
206 207 7.228507 TGTTGAGTTAAGAGCATGTGTTATGTT 59.771 33.333 0.00 0.00 0.00 2.71
207 208 7.744087 TGAGTTAAGAGCATGTGTTATGTTT 57.256 32.000 0.00 0.00 0.00 2.83
208 209 8.165239 TGAGTTAAGAGCATGTGTTATGTTTT 57.835 30.769 0.00 0.00 0.00 2.43
209 210 8.289618 TGAGTTAAGAGCATGTGTTATGTTTTC 58.710 33.333 0.00 0.00 0.00 2.29
210 211 8.396272 AGTTAAGAGCATGTGTTATGTTTTCT 57.604 30.769 0.00 0.00 0.00 2.52
211 212 8.507249 AGTTAAGAGCATGTGTTATGTTTTCTC 58.493 33.333 0.00 0.00 0.00 2.87
212 213 8.507249 GTTAAGAGCATGTGTTATGTTTTCTCT 58.493 33.333 0.00 0.00 0.00 3.10
213 214 6.734104 AGAGCATGTGTTATGTTTTCTCTC 57.266 37.500 0.00 0.00 0.00 3.20
214 215 5.645497 AGAGCATGTGTTATGTTTTCTCTCC 59.355 40.000 0.00 0.00 0.00 3.71
215 216 4.702131 AGCATGTGTTATGTTTTCTCTCCC 59.298 41.667 0.00 0.00 0.00 4.30
216 217 4.437390 GCATGTGTTATGTTTTCTCTCCCG 60.437 45.833 0.00 0.00 0.00 5.14
217 218 4.345859 TGTGTTATGTTTTCTCTCCCGT 57.654 40.909 0.00 0.00 0.00 5.28
218 219 4.710324 TGTGTTATGTTTTCTCTCCCGTT 58.290 39.130 0.00 0.00 0.00 4.44
219 220 4.513692 TGTGTTATGTTTTCTCTCCCGTTG 59.486 41.667 0.00 0.00 0.00 4.10
220 221 3.500680 TGTTATGTTTTCTCTCCCGTTGC 59.499 43.478 0.00 0.00 0.00 4.17
221 222 2.270352 ATGTTTTCTCTCCCGTTGCA 57.730 45.000 0.00 0.00 0.00 4.08
222 223 2.045561 TGTTTTCTCTCCCGTTGCAA 57.954 45.000 0.00 0.00 0.00 4.08
223 224 1.673920 TGTTTTCTCTCCCGTTGCAAC 59.326 47.619 19.89 19.89 0.00 4.17
233 234 4.683334 GTTGCAACGCACGGGCTC 62.683 66.667 14.90 0.00 38.71 4.70
234 235 4.927782 TTGCAACGCACGGGCTCT 62.928 61.111 8.62 0.00 38.71 4.09
235 236 4.927782 TGCAACGCACGGGCTCTT 62.928 61.111 8.62 0.00 38.10 2.85
236 237 3.660111 GCAACGCACGGGCTCTTT 61.660 61.111 8.62 0.00 38.10 2.52
237 238 3.030652 CAACGCACGGGCTCTTTT 58.969 55.556 8.62 0.00 38.10 2.27
238 239 1.370414 CAACGCACGGGCTCTTTTG 60.370 57.895 8.62 1.62 38.10 2.44
239 240 3.194272 AACGCACGGGCTCTTTTGC 62.194 57.895 8.62 0.00 38.10 3.68
240 241 3.357079 CGCACGGGCTCTTTTGCT 61.357 61.111 8.62 0.00 38.10 3.91
241 242 2.032634 CGCACGGGCTCTTTTGCTA 61.033 57.895 8.62 0.00 38.10 3.49
242 243 1.796796 GCACGGGCTCTTTTGCTAG 59.203 57.895 0.00 0.00 36.96 3.42
245 246 2.695359 CACGGGCTCTTTTGCTAGTTA 58.305 47.619 0.00 0.00 0.00 2.24
260 261 6.633500 TGCTAGTTACACAAAAGCTTCATT 57.367 33.333 0.00 0.00 34.28 2.57
266 267 7.996385 AGTTACACAAAAGCTTCATTGTAGTT 58.004 30.769 14.55 6.67 37.66 2.24
298 299 4.096732 AGCAAATTGTTTGGCGAGATAC 57.903 40.909 4.77 0.00 40.94 2.24
337 338 8.123575 CGTAGCACAACTATGTAGCTATATAGG 58.876 40.741 30.02 20.19 42.52 2.57
349 350 2.168521 GCTATATAGGCGGCCTTCATGA 59.831 50.000 29.02 9.17 34.61 3.07
351 352 2.543777 TATAGGCGGCCTTCATGAAC 57.456 50.000 29.02 0.00 34.61 3.18
352 353 0.179018 ATAGGCGGCCTTCATGAACC 60.179 55.000 29.02 4.48 34.61 3.62
359 360 1.408822 GGCCTTCATGAACCGAGGATT 60.409 52.381 14.25 0.00 0.00 3.01
406 412 8.857694 TCCTCGAATAAAACACTTTTATCCTT 57.142 30.769 1.42 0.00 43.14 3.36
600 612 1.210870 GTAACGGCGCAATATTCGGA 58.789 50.000 10.83 0.00 0.00 4.55
823 1001 0.882474 AGATATCGGTAGGTGCTCGC 59.118 55.000 0.00 0.00 0.00 5.03
905 1083 1.410517 AGAGCACCACGATCACATAGG 59.589 52.381 0.00 0.00 0.00 2.57
926 1104 5.595257 GGATAGACCTTTAGACTTTCCGT 57.405 43.478 0.00 0.00 35.41 4.69
977 1155 2.391821 GAGCGTGTGCAATCGACG 59.608 61.111 14.47 9.59 46.23 5.12
1017 1198 3.447025 GATGGGGAGGCCGTCTTCG 62.447 68.421 0.00 0.00 0.00 3.79
1086 1267 1.153429 GCTGTACATGGACCGGGAC 60.153 63.158 6.32 0.00 0.00 4.46
1087 1268 1.520666 CTGTACATGGACCGGGACC 59.479 63.158 6.32 8.70 0.00 4.46
1089 1270 0.974010 TGTACATGGACCGGGACCTC 60.974 60.000 16.37 1.54 0.00 3.85
1203 1384 3.636043 AACGTGGCGTGCTTCGTG 61.636 61.111 13.13 0.00 39.99 4.35
1394 1596 7.769507 TCTCCATTTTCTTTCATCTCAGATGAG 59.230 37.037 16.98 7.45 43.36 2.90
1450 1657 5.451798 CCAGTTCTCTCTCTGCTCCTTTATC 60.452 48.000 0.00 0.00 0.00 1.75
1522 1729 2.825532 TGGTGCTAGCAAAAGGAATTCC 59.174 45.455 21.29 17.31 0.00 3.01
1548 1755 4.015872 TGTCCATGGTTACAAAGAGGTC 57.984 45.455 12.58 0.00 0.00 3.85
1930 2137 1.466856 CTTTGCCATGCTGCCTTCTA 58.533 50.000 0.00 0.00 0.00 2.10
1931 2138 1.133790 CTTTGCCATGCTGCCTTCTAC 59.866 52.381 0.00 0.00 0.00 2.59
1932 2139 0.329261 TTGCCATGCTGCCTTCTACT 59.671 50.000 0.00 0.00 0.00 2.57
1933 2140 1.203237 TGCCATGCTGCCTTCTACTA 58.797 50.000 0.00 0.00 0.00 1.82
1944 2151 5.866633 GCTGCCTTCTACTACATGCTTATAG 59.133 44.000 0.00 0.00 0.00 1.31
1982 2200 6.435430 TTGGAACACATCATTAATTCCTCG 57.565 37.500 0.00 0.00 39.29 4.63
1987 2205 7.201696 GGAACACATCATTAATTCCTCGCTAAA 60.202 37.037 0.00 0.00 36.65 1.85
1994 2212 7.693952 TCATTAATTCCTCGCTAAAACACATC 58.306 34.615 0.00 0.00 0.00 3.06
2008 2226 2.695359 ACACATCGCAACTCGGTTTAT 58.305 42.857 0.00 0.00 39.05 1.40
2009 2227 2.671396 ACACATCGCAACTCGGTTTATC 59.329 45.455 0.00 0.00 39.05 1.75
2010 2228 2.930040 CACATCGCAACTCGGTTTATCT 59.070 45.455 0.00 0.00 39.05 1.98
2011 2229 4.109766 CACATCGCAACTCGGTTTATCTA 58.890 43.478 0.00 0.00 39.05 1.98
2012 2230 4.745125 CACATCGCAACTCGGTTTATCTAT 59.255 41.667 0.00 0.00 39.05 1.98
2013 2231 5.918576 CACATCGCAACTCGGTTTATCTATA 59.081 40.000 0.00 0.00 39.05 1.31
2014 2232 6.586463 CACATCGCAACTCGGTTTATCTATAT 59.414 38.462 0.00 0.00 39.05 0.86
2015 2233 6.807230 ACATCGCAACTCGGTTTATCTATATC 59.193 38.462 0.00 0.00 39.05 1.63
2016 2234 6.321848 TCGCAACTCGGTTTATCTATATCA 57.678 37.500 0.00 0.00 39.05 2.15
2017 2235 6.920817 TCGCAACTCGGTTTATCTATATCAT 58.079 36.000 0.00 0.00 39.05 2.45
2018 2236 7.027760 TCGCAACTCGGTTTATCTATATCATC 58.972 38.462 0.00 0.00 39.05 2.92
2019 2237 6.806739 CGCAACTCGGTTTATCTATATCATCA 59.193 38.462 0.00 0.00 33.78 3.07
2020 2238 7.328493 CGCAACTCGGTTTATCTATATCATCAA 59.672 37.037 0.00 0.00 33.78 2.57
2021 2239 9.155975 GCAACTCGGTTTATCTATATCATCAAT 57.844 33.333 0.00 0.00 0.00 2.57
2053 2271 3.707316 CCAAATGGGTAGATCCAAACCA 58.293 45.455 4.97 4.97 40.62 3.67
2054 2272 4.289245 CCAAATGGGTAGATCCAAACCAT 58.711 43.478 9.04 9.04 43.39 3.55
2055 2273 4.342092 CCAAATGGGTAGATCCAAACCATC 59.658 45.833 14.09 0.00 40.84 3.51
2056 2274 5.203528 CAAATGGGTAGATCCAAACCATCT 58.796 41.667 14.09 0.00 40.84 2.90
2057 2275 4.713792 ATGGGTAGATCCAAACCATCTC 57.286 45.455 9.04 0.00 37.35 2.75
2058 2276 2.434336 TGGGTAGATCCAAACCATCTCG 59.566 50.000 10.66 0.00 37.51 4.04
2059 2277 2.698797 GGGTAGATCCAAACCATCTCGA 59.301 50.000 10.66 0.00 37.51 4.04
2060 2278 3.492829 GGGTAGATCCAAACCATCTCGAC 60.493 52.174 10.66 0.00 37.51 4.20
2061 2279 2.990066 AGATCCAAACCATCTCGACC 57.010 50.000 0.00 0.00 0.00 4.79
2062 2280 1.137086 AGATCCAAACCATCTCGACCG 59.863 52.381 0.00 0.00 0.00 4.79
2063 2281 0.902531 ATCCAAACCATCTCGACCGT 59.097 50.000 0.00 0.00 0.00 4.83
2064 2282 0.037697 TCCAAACCATCTCGACCGTG 60.038 55.000 0.00 0.00 0.00 4.94
2065 2283 0.037697 CCAAACCATCTCGACCGTGA 60.038 55.000 0.00 0.00 0.00 4.35
2066 2284 1.606994 CCAAACCATCTCGACCGTGAA 60.607 52.381 0.00 0.00 0.00 3.18
2067 2285 2.139917 CAAACCATCTCGACCGTGAAA 58.860 47.619 0.00 0.00 0.00 2.69
2068 2286 1.792006 AACCATCTCGACCGTGAAAC 58.208 50.000 0.00 0.00 0.00 2.78
2069 2287 0.037605 ACCATCTCGACCGTGAAACC 60.038 55.000 0.00 0.00 0.00 3.27
2070 2288 0.037697 CCATCTCGACCGTGAAACCA 60.038 55.000 0.00 0.00 0.00 3.67
2071 2289 1.405526 CCATCTCGACCGTGAAACCAT 60.406 52.381 0.00 0.00 0.00 3.55
2072 2290 1.660607 CATCTCGACCGTGAAACCATG 59.339 52.381 0.00 0.00 0.00 3.66
2073 2291 0.677288 TCTCGACCGTGAAACCATGT 59.323 50.000 0.00 0.00 0.00 3.21
2074 2292 1.069513 TCTCGACCGTGAAACCATGTT 59.930 47.619 0.00 0.00 0.00 2.71
2075 2293 2.296752 TCTCGACCGTGAAACCATGTTA 59.703 45.455 0.00 0.00 0.00 2.41
2076 2294 3.056393 TCTCGACCGTGAAACCATGTTAT 60.056 43.478 0.00 0.00 0.00 1.89
2077 2295 3.255725 TCGACCGTGAAACCATGTTATC 58.744 45.455 0.00 0.00 0.00 1.75
2078 2296 3.056393 TCGACCGTGAAACCATGTTATCT 60.056 43.478 0.00 0.00 0.00 1.98
2079 2297 4.158209 TCGACCGTGAAACCATGTTATCTA 59.842 41.667 0.00 0.00 0.00 1.98
2080 2298 4.503007 CGACCGTGAAACCATGTTATCTAG 59.497 45.833 0.00 0.00 0.00 2.43
2081 2299 4.189231 ACCGTGAAACCATGTTATCTAGC 58.811 43.478 0.00 0.00 0.00 3.42
2082 2300 3.245284 CCGTGAAACCATGTTATCTAGCG 59.755 47.826 0.00 0.00 0.00 4.26
2083 2301 3.245284 CGTGAAACCATGTTATCTAGCGG 59.755 47.826 0.00 0.00 0.00 5.52
2084 2302 4.189231 GTGAAACCATGTTATCTAGCGGT 58.811 43.478 0.00 0.00 0.00 5.68
2085 2303 4.634443 GTGAAACCATGTTATCTAGCGGTT 59.366 41.667 0.00 0.00 38.35 4.44
2086 2304 4.873827 TGAAACCATGTTATCTAGCGGTTC 59.126 41.667 0.00 0.00 35.74 3.62
2087 2305 4.481368 AACCATGTTATCTAGCGGTTCA 57.519 40.909 0.00 0.00 31.12 3.18
2088 2306 4.481368 ACCATGTTATCTAGCGGTTCAA 57.519 40.909 0.00 0.00 0.00 2.69
2089 2307 4.839121 ACCATGTTATCTAGCGGTTCAAA 58.161 39.130 0.00 0.00 0.00 2.69
2090 2308 5.437060 ACCATGTTATCTAGCGGTTCAAAT 58.563 37.500 0.00 0.00 0.00 2.32
2091 2309 5.527582 ACCATGTTATCTAGCGGTTCAAATC 59.472 40.000 0.00 0.00 0.00 2.17
2092 2310 5.333339 CCATGTTATCTAGCGGTTCAAATCG 60.333 44.000 0.00 0.00 35.16 3.34
2101 2319 3.201726 CGGTTCAAATCGCTTCAATGT 57.798 42.857 0.00 0.00 0.00 2.71
2102 2320 3.564511 CGGTTCAAATCGCTTCAATGTT 58.435 40.909 0.00 0.00 0.00 2.71
2103 2321 3.361644 CGGTTCAAATCGCTTCAATGTTG 59.638 43.478 0.00 0.00 0.00 3.33
2104 2322 4.545610 GGTTCAAATCGCTTCAATGTTGA 58.454 39.130 0.00 0.00 34.92 3.18
2105 2323 4.618489 GGTTCAAATCGCTTCAATGTTGAG 59.382 41.667 0.00 0.00 38.61 3.02
2106 2324 3.825308 TCAAATCGCTTCAATGTTGAGC 58.175 40.909 0.00 2.30 38.61 4.26
2107 2325 3.252944 TCAAATCGCTTCAATGTTGAGCA 59.747 39.130 13.55 5.58 38.61 4.26
2108 2326 2.907910 ATCGCTTCAATGTTGAGCAC 57.092 45.000 13.55 0.00 38.61 4.40
2109 2327 0.874390 TCGCTTCAATGTTGAGCACC 59.126 50.000 13.55 0.00 38.61 5.01
2110 2328 0.592637 CGCTTCAATGTTGAGCACCA 59.407 50.000 13.55 0.00 38.61 4.17
2111 2329 1.001487 CGCTTCAATGTTGAGCACCAA 60.001 47.619 13.55 0.00 38.61 3.67
2112 2330 2.543445 CGCTTCAATGTTGAGCACCAAA 60.543 45.455 13.55 0.00 38.61 3.28
2113 2331 2.796593 GCTTCAATGTTGAGCACCAAAC 59.203 45.455 10.31 0.00 38.61 2.93
2114 2332 3.737663 GCTTCAATGTTGAGCACCAAACA 60.738 43.478 10.31 0.00 38.61 2.83
2115 2333 3.435105 TCAATGTTGAGCACCAAACAC 57.565 42.857 0.00 0.00 36.36 3.32
2116 2334 2.118683 CAATGTTGAGCACCAAACACG 58.881 47.619 0.00 0.00 36.36 4.49
2117 2335 1.388547 ATGTTGAGCACCAAACACGT 58.611 45.000 0.00 0.00 36.36 4.49
2118 2336 0.730265 TGTTGAGCACCAAACACGTC 59.270 50.000 0.00 0.00 36.36 4.34
2119 2337 1.014352 GTTGAGCACCAAACACGTCT 58.986 50.000 0.00 0.00 36.36 4.18
2120 2338 2.206750 GTTGAGCACCAAACACGTCTA 58.793 47.619 0.00 0.00 36.36 2.59
2121 2339 2.605837 TGAGCACCAAACACGTCTAA 57.394 45.000 0.00 0.00 0.00 2.10
2122 2340 2.206750 TGAGCACCAAACACGTCTAAC 58.793 47.619 0.00 0.00 0.00 2.34
2123 2341 6.798981 GTTGAGCACCAAACACGTCTAACG 62.799 50.000 0.00 0.00 41.26 3.18
2136 2354 4.297299 CGTCTAACGCTCTAATTACCCA 57.703 45.455 0.00 0.00 33.65 4.51
2137 2355 4.040376 CGTCTAACGCTCTAATTACCCAC 58.960 47.826 0.00 0.00 33.65 4.61
2138 2356 4.366586 GTCTAACGCTCTAATTACCCACC 58.633 47.826 0.00 0.00 0.00 4.61
2139 2357 4.025360 TCTAACGCTCTAATTACCCACCA 58.975 43.478 0.00 0.00 0.00 4.17
2140 2358 2.685850 ACGCTCTAATTACCCACCAC 57.314 50.000 0.00 0.00 0.00 4.16
2141 2359 2.185387 ACGCTCTAATTACCCACCACT 58.815 47.619 0.00 0.00 0.00 4.00
2142 2360 2.093658 ACGCTCTAATTACCCACCACTG 60.094 50.000 0.00 0.00 0.00 3.66
2143 2361 2.289565 GCTCTAATTACCCACCACTGC 58.710 52.381 0.00 0.00 0.00 4.40
2144 2362 2.919228 CTCTAATTACCCACCACTGCC 58.081 52.381 0.00 0.00 0.00 4.85
2145 2363 2.238646 CTCTAATTACCCACCACTGCCA 59.761 50.000 0.00 0.00 0.00 4.92
2146 2364 2.849943 TCTAATTACCCACCACTGCCAT 59.150 45.455 0.00 0.00 0.00 4.40
2147 2365 2.621556 AATTACCCACCACTGCCATT 57.378 45.000 0.00 0.00 0.00 3.16
2148 2366 1.851304 ATTACCCACCACTGCCATTG 58.149 50.000 0.00 0.00 0.00 2.82
2149 2367 0.774276 TTACCCACCACTGCCATTGA 59.226 50.000 0.00 0.00 0.00 2.57
2150 2368 0.998928 TACCCACCACTGCCATTGAT 59.001 50.000 0.00 0.00 0.00 2.57
2151 2369 0.114954 ACCCACCACTGCCATTGATT 59.885 50.000 0.00 0.00 0.00 2.57
2152 2370 1.357420 ACCCACCACTGCCATTGATTA 59.643 47.619 0.00 0.00 0.00 1.75
2153 2371 2.024080 ACCCACCACTGCCATTGATTAT 60.024 45.455 0.00 0.00 0.00 1.28
2154 2372 3.204158 ACCCACCACTGCCATTGATTATA 59.796 43.478 0.00 0.00 0.00 0.98
2155 2373 4.214310 CCCACCACTGCCATTGATTATAA 58.786 43.478 0.00 0.00 0.00 0.98
2156 2374 4.648762 CCCACCACTGCCATTGATTATAAA 59.351 41.667 0.00 0.00 0.00 1.40
2157 2375 5.451798 CCCACCACTGCCATTGATTATAAAC 60.452 44.000 0.00 0.00 0.00 2.01
2158 2376 5.126869 CCACCACTGCCATTGATTATAAACA 59.873 40.000 0.00 0.00 0.00 2.83
2159 2377 6.035843 CACCACTGCCATTGATTATAAACAC 58.964 40.000 0.00 0.00 0.00 3.32
2160 2378 5.163663 ACCACTGCCATTGATTATAAACACG 60.164 40.000 0.00 0.00 0.00 4.49
2161 2379 5.163663 CCACTGCCATTGATTATAAACACGT 60.164 40.000 0.00 0.00 0.00 4.49
2162 2380 6.321717 CACTGCCATTGATTATAAACACGTT 58.678 36.000 0.00 0.00 0.00 3.99
2163 2381 6.806249 CACTGCCATTGATTATAAACACGTTT 59.194 34.615 0.22 0.22 36.63 3.60
2164 2382 7.328249 CACTGCCATTGATTATAAACACGTTTT 59.672 33.333 0.00 0.00 34.23 2.43
2165 2383 7.328249 ACTGCCATTGATTATAAACACGTTTTG 59.672 33.333 0.00 0.00 34.23 2.44
2166 2384 7.371159 TGCCATTGATTATAAACACGTTTTGA 58.629 30.769 0.00 0.00 34.23 2.69
2167 2385 7.327275 TGCCATTGATTATAAACACGTTTTGAC 59.673 33.333 0.00 0.00 34.23 3.18
2168 2386 7.540745 GCCATTGATTATAAACACGTTTTGACT 59.459 33.333 0.00 0.00 34.23 3.41
2169 2387 9.061610 CCATTGATTATAAACACGTTTTGACTC 57.938 33.333 0.00 0.00 34.23 3.36
2170 2388 9.605955 CATTGATTATAAACACGTTTTGACTCA 57.394 29.630 0.00 0.00 34.23 3.41
2172 2390 8.996988 TGATTATAAACACGTTTTGACTCAAC 57.003 30.769 0.00 0.00 34.23 3.18
2179 2397 3.369835 CGTTTTGACTCAACGCTATCC 57.630 47.619 0.00 0.00 40.49 2.59
2180 2398 2.093783 CGTTTTGACTCAACGCTATCCC 59.906 50.000 0.00 0.00 40.49 3.85
2181 2399 3.335579 GTTTTGACTCAACGCTATCCCT 58.664 45.455 0.00 0.00 0.00 4.20
2182 2400 3.695830 TTTGACTCAACGCTATCCCTT 57.304 42.857 0.00 0.00 0.00 3.95
2183 2401 2.672961 TGACTCAACGCTATCCCTTG 57.327 50.000 0.00 0.00 0.00 3.61
2184 2402 2.176045 TGACTCAACGCTATCCCTTGA 58.824 47.619 0.00 0.00 0.00 3.02
2185 2403 2.565391 TGACTCAACGCTATCCCTTGAA 59.435 45.455 0.00 0.00 0.00 2.69
2186 2404 3.007506 TGACTCAACGCTATCCCTTGAAA 59.992 43.478 0.00 0.00 0.00 2.69
2187 2405 4.192317 GACTCAACGCTATCCCTTGAAAT 58.808 43.478 0.00 0.00 0.00 2.17
2188 2406 4.192317 ACTCAACGCTATCCCTTGAAATC 58.808 43.478 0.00 0.00 0.00 2.17
2189 2407 4.080863 ACTCAACGCTATCCCTTGAAATCT 60.081 41.667 0.00 0.00 0.00 2.40
2190 2408 4.191544 TCAACGCTATCCCTTGAAATCTG 58.808 43.478 0.00 0.00 0.00 2.90
2191 2409 2.565841 ACGCTATCCCTTGAAATCTGC 58.434 47.619 0.00 0.00 0.00 4.26
2192 2410 1.876156 CGCTATCCCTTGAAATCTGCC 59.124 52.381 0.00 0.00 0.00 4.85
2193 2411 2.746142 CGCTATCCCTTGAAATCTGCCA 60.746 50.000 0.00 0.00 0.00 4.92
2194 2412 3.494332 GCTATCCCTTGAAATCTGCCAT 58.506 45.455 0.00 0.00 0.00 4.40
2195 2413 3.255149 GCTATCCCTTGAAATCTGCCATG 59.745 47.826 0.00 0.00 0.00 3.66
2196 2414 2.905415 TCCCTTGAAATCTGCCATGT 57.095 45.000 0.00 0.00 0.00 3.21
2197 2415 4.524802 ATCCCTTGAAATCTGCCATGTA 57.475 40.909 0.00 0.00 0.00 2.29
2198 2416 4.314522 TCCCTTGAAATCTGCCATGTAA 57.685 40.909 0.00 0.00 0.00 2.41
2199 2417 4.870636 TCCCTTGAAATCTGCCATGTAAT 58.129 39.130 0.00 0.00 0.00 1.89
2200 2418 5.271598 TCCCTTGAAATCTGCCATGTAATT 58.728 37.500 0.00 0.00 0.00 1.40
2201 2419 6.430864 TCCCTTGAAATCTGCCATGTAATTA 58.569 36.000 0.00 0.00 0.00 1.40
2202 2420 6.894654 TCCCTTGAAATCTGCCATGTAATTAA 59.105 34.615 0.00 0.00 0.00 1.40
2203 2421 7.564660 TCCCTTGAAATCTGCCATGTAATTAAT 59.435 33.333 0.00 0.00 0.00 1.40
2204 2422 8.859090 CCCTTGAAATCTGCCATGTAATTAATA 58.141 33.333 0.00 0.00 0.00 0.98
2208 2426 9.812347 TGAAATCTGCCATGTAATTAATATCCT 57.188 29.630 0.00 0.00 0.00 3.24
2226 2444 8.904099 AATATCCTACTATTCCCACGAAAAAG 57.096 34.615 0.00 0.00 0.00 2.27
2227 2445 5.750352 TCCTACTATTCCCACGAAAAAGT 57.250 39.130 0.00 0.00 34.45 2.66
2228 2446 6.855763 TCCTACTATTCCCACGAAAAAGTA 57.144 37.500 0.00 0.00 33.04 2.24
2229 2447 7.243604 TCCTACTATTCCCACGAAAAAGTAA 57.756 36.000 0.00 0.00 33.53 2.24
2230 2448 7.854337 TCCTACTATTCCCACGAAAAAGTAAT 58.146 34.615 0.00 0.00 33.53 1.89
2231 2449 8.323567 TCCTACTATTCCCACGAAAAAGTAATT 58.676 33.333 0.00 0.00 33.53 1.40
2232 2450 8.395633 CCTACTATTCCCACGAAAAAGTAATTG 58.604 37.037 0.00 0.00 33.53 2.32
2233 2451 7.989416 ACTATTCCCACGAAAAAGTAATTGA 57.011 32.000 0.00 0.00 30.51 2.57
2234 2452 8.575649 ACTATTCCCACGAAAAAGTAATTGAT 57.424 30.769 0.00 0.00 30.51 2.57
2235 2453 9.675464 ACTATTCCCACGAAAAAGTAATTGATA 57.325 29.630 0.00 0.00 30.51 2.15
2238 2456 8.801882 TTCCCACGAAAAAGTAATTGATATCT 57.198 30.769 3.98 0.00 0.00 1.98
2239 2457 8.801882 TCCCACGAAAAAGTAATTGATATCTT 57.198 30.769 3.98 0.00 0.00 2.40
2240 2458 9.893634 TCCCACGAAAAAGTAATTGATATCTTA 57.106 29.630 3.98 0.00 0.00 2.10
2241 2459 9.931210 CCCACGAAAAAGTAATTGATATCTTAC 57.069 33.333 3.98 5.62 0.00 2.34
2242 2460 9.931210 CCACGAAAAAGTAATTGATATCTTACC 57.069 33.333 3.98 0.00 0.00 2.85
2256 2474 8.083462 TGATATCTTACCAAATATCAACGTGC 57.917 34.615 3.98 0.00 40.28 5.34
2257 2475 7.713073 TGATATCTTACCAAATATCAACGTGCA 59.287 33.333 3.98 0.00 40.28 4.57
2258 2476 6.751514 ATCTTACCAAATATCAACGTGCAA 57.248 33.333 0.00 0.00 0.00 4.08
2259 2477 5.933790 TCTTACCAAATATCAACGTGCAAC 58.066 37.500 0.00 0.00 0.00 4.17
2260 2478 5.470437 TCTTACCAAATATCAACGTGCAACA 59.530 36.000 0.00 0.00 35.74 3.33
2261 2479 4.159377 ACCAAATATCAACGTGCAACAG 57.841 40.909 0.00 0.00 35.74 3.16
2262 2480 3.818210 ACCAAATATCAACGTGCAACAGA 59.182 39.130 0.00 0.00 35.74 3.41
2263 2481 4.458989 ACCAAATATCAACGTGCAACAGAT 59.541 37.500 0.00 0.00 35.74 2.90
2264 2482 5.645929 ACCAAATATCAACGTGCAACAGATA 59.354 36.000 0.00 0.00 35.74 1.98
2265 2483 6.318648 ACCAAATATCAACGTGCAACAGATAT 59.681 34.615 0.00 0.00 37.17 1.63
2266 2484 7.497579 ACCAAATATCAACGTGCAACAGATATA 59.502 33.333 10.68 0.00 35.65 0.86
2267 2485 8.506437 CCAAATATCAACGTGCAACAGATATAT 58.494 33.333 10.68 0.00 35.65 0.86
2268 2486 9.533983 CAAATATCAACGTGCAACAGATATATC 57.466 33.333 4.42 4.42 35.65 1.63
2269 2487 9.494271 AAATATCAACGTGCAACAGATATATCT 57.506 29.630 9.57 9.57 35.65 1.98
2270 2488 9.494271 AATATCAACGTGCAACAGATATATCTT 57.506 29.630 12.75 2.49 35.65 2.40
2272 2490 7.694388 TCAACGTGCAACAGATATATCTTAC 57.306 36.000 12.75 6.63 35.74 2.34
2273 2491 6.700081 TCAACGTGCAACAGATATATCTTACC 59.300 38.462 12.75 3.07 35.74 2.85
2274 2492 6.406692 ACGTGCAACAGATATATCTTACCT 57.593 37.500 12.75 0.00 35.74 3.08
2275 2493 7.520451 ACGTGCAACAGATATATCTTACCTA 57.480 36.000 12.75 0.00 35.74 3.08
2276 2494 7.948357 ACGTGCAACAGATATATCTTACCTAA 58.052 34.615 12.75 0.00 35.74 2.69
2277 2495 8.585881 ACGTGCAACAGATATATCTTACCTAAT 58.414 33.333 12.75 0.00 35.74 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.766461 ATCTCCGGTGGCCTTAGGG 60.766 63.158 3.32 0.00 0.00 3.53
3 4 1.447643 CATCTCCGGTGGCCTTAGG 59.552 63.158 3.32 4.25 0.00 2.69
4 5 1.447643 CCATCTCCGGTGGCCTTAG 59.552 63.158 3.32 0.00 0.00 2.18
5 6 2.070039 CCCATCTCCGGTGGCCTTA 61.070 63.158 3.32 0.00 35.35 2.69
6 7 3.411517 CCCATCTCCGGTGGCCTT 61.412 66.667 3.32 0.00 35.35 4.35
7 8 4.414956 TCCCATCTCCGGTGGCCT 62.415 66.667 3.32 0.00 35.35 5.19
8 9 4.176752 GTCCCATCTCCGGTGGCC 62.177 72.222 0.00 0.00 35.35 5.36
9 10 4.530857 CGTCCCATCTCCGGTGGC 62.531 72.222 0.00 0.00 35.35 5.01
10 11 3.849951 CCGTCCCATCTCCGGTGG 61.850 72.222 0.00 1.00 37.00 4.61
11 12 2.758327 TCCGTCCCATCTCCGGTG 60.758 66.667 0.00 0.00 42.30 4.94
12 13 2.758737 GTCCGTCCCATCTCCGGT 60.759 66.667 0.00 0.00 42.30 5.28
13 14 3.537874 GGTCCGTCCCATCTCCGG 61.538 72.222 0.00 0.00 43.03 5.14
14 15 3.900892 CGGTCCGTCCCATCTCCG 61.901 72.222 2.08 0.00 0.00 4.63
15 16 2.441532 TCGGTCCGTCCCATCTCC 60.442 66.667 11.88 0.00 0.00 3.71
16 17 2.806237 GTCGGTCCGTCCCATCTC 59.194 66.667 11.88 0.00 0.00 2.75
17 18 3.138798 CGTCGGTCCGTCCCATCT 61.139 66.667 11.88 0.00 0.00 2.90
18 19 4.867599 GCGTCGGTCCGTCCCATC 62.868 72.222 11.88 0.00 0.00 3.51
41 42 4.715523 TTTTCTGCCTCCCGCCGG 62.716 66.667 0.00 0.00 36.24 6.13
42 43 3.431725 GTTTTCTGCCTCCCGCCG 61.432 66.667 0.00 0.00 36.24 6.46
43 44 3.062466 GGTTTTCTGCCTCCCGCC 61.062 66.667 0.00 0.00 36.24 6.13
44 45 0.322187 TAAGGTTTTCTGCCTCCCGC 60.322 55.000 0.00 0.00 34.81 6.13
45 46 1.003233 ACTAAGGTTTTCTGCCTCCCG 59.997 52.381 0.00 0.00 34.81 5.14
46 47 2.881111 ACTAAGGTTTTCTGCCTCCC 57.119 50.000 0.00 0.00 34.81 4.30
47 48 3.255888 CCAAACTAAGGTTTTCTGCCTCC 59.744 47.826 0.00 0.00 42.96 4.30
48 49 4.142038 TCCAAACTAAGGTTTTCTGCCTC 58.858 43.478 0.00 0.00 42.96 4.70
49 50 4.145052 CTCCAAACTAAGGTTTTCTGCCT 58.855 43.478 0.00 0.00 42.96 4.75
50 51 3.255888 CCTCCAAACTAAGGTTTTCTGCC 59.744 47.826 0.00 0.00 42.96 4.85
51 52 3.305403 GCCTCCAAACTAAGGTTTTCTGC 60.305 47.826 0.00 0.00 42.96 4.26
52 53 3.058224 CGCCTCCAAACTAAGGTTTTCTG 60.058 47.826 0.00 0.00 42.96 3.02
53 54 3.146847 CGCCTCCAAACTAAGGTTTTCT 58.853 45.455 0.00 0.00 42.96 2.52
54 55 2.228103 CCGCCTCCAAACTAAGGTTTTC 59.772 50.000 0.00 0.00 42.96 2.29
55 56 2.235891 CCGCCTCCAAACTAAGGTTTT 58.764 47.619 0.00 0.00 42.96 2.43
56 57 1.905637 CCGCCTCCAAACTAAGGTTT 58.094 50.000 0.00 0.00 45.35 3.27
57 58 0.608308 GCCGCCTCCAAACTAAGGTT 60.608 55.000 0.00 0.00 37.24 3.50
58 59 1.002502 GCCGCCTCCAAACTAAGGT 60.003 57.895 0.00 0.00 34.96 3.50
59 60 2.106683 CGCCGCCTCCAAACTAAGG 61.107 63.158 0.00 0.00 35.65 2.69
60 61 2.106683 CCGCCGCCTCCAAACTAAG 61.107 63.158 0.00 0.00 0.00 2.18
61 62 2.046700 CCGCCGCCTCCAAACTAA 60.047 61.111 0.00 0.00 0.00 2.24
62 63 4.770874 GCCGCCGCCTCCAAACTA 62.771 66.667 0.00 0.00 0.00 2.24
75 76 2.046314 TTTGACCTAGGCAGCCGC 60.046 61.111 9.30 0.00 37.44 6.53
76 77 1.450312 CCTTTGACCTAGGCAGCCG 60.450 63.158 9.30 0.00 0.00 5.52
77 78 0.393132 GACCTTTGACCTAGGCAGCC 60.393 60.000 9.30 1.84 36.17 4.85
78 79 0.615850 AGACCTTTGACCTAGGCAGC 59.384 55.000 9.30 0.00 36.17 5.25
79 80 3.100671 ACTAGACCTTTGACCTAGGCAG 58.899 50.000 9.30 0.00 36.17 4.85
80 81 3.185880 ACTAGACCTTTGACCTAGGCA 57.814 47.619 9.30 5.14 36.17 4.75
81 82 3.770388 AGAACTAGACCTTTGACCTAGGC 59.230 47.826 9.30 2.11 36.17 3.93
82 83 5.017490 TGAGAACTAGACCTTTGACCTAGG 58.983 45.833 7.41 7.41 35.43 3.02
83 84 6.605594 AGATGAGAACTAGACCTTTGACCTAG 59.394 42.308 0.00 0.00 36.76 3.02
84 85 6.494952 AGATGAGAACTAGACCTTTGACCTA 58.505 40.000 0.00 0.00 0.00 3.08
85 86 5.337788 AGATGAGAACTAGACCTTTGACCT 58.662 41.667 0.00 0.00 0.00 3.85
86 87 5.669164 AGATGAGAACTAGACCTTTGACC 57.331 43.478 0.00 0.00 0.00 4.02
87 88 7.971183 AAAAGATGAGAACTAGACCTTTGAC 57.029 36.000 0.00 0.00 0.00 3.18
109 110 8.800332 AGTCGACTTATAGAGGTTCAGTAAAAA 58.200 33.333 13.58 0.00 0.00 1.94
110 111 8.345724 AGTCGACTTATAGAGGTTCAGTAAAA 57.654 34.615 13.58 0.00 0.00 1.52
111 112 7.934855 AGTCGACTTATAGAGGTTCAGTAAA 57.065 36.000 13.58 0.00 0.00 2.01
112 113 7.828223 AGAAGTCGACTTATAGAGGTTCAGTAA 59.172 37.037 29.79 0.00 36.11 2.24
113 114 7.337167 AGAAGTCGACTTATAGAGGTTCAGTA 58.663 38.462 29.79 0.00 36.11 2.74
114 115 6.181908 AGAAGTCGACTTATAGAGGTTCAGT 58.818 40.000 29.79 3.37 36.11 3.41
115 116 6.687081 AGAAGTCGACTTATAGAGGTTCAG 57.313 41.667 29.79 0.00 36.11 3.02
116 117 6.625300 GCAAGAAGTCGACTTATAGAGGTTCA 60.625 42.308 29.79 0.00 36.11 3.18
117 118 5.744819 GCAAGAAGTCGACTTATAGAGGTTC 59.255 44.000 29.79 14.63 36.11 3.62
118 119 5.419471 AGCAAGAAGTCGACTTATAGAGGTT 59.581 40.000 29.79 12.72 36.11 3.50
119 120 4.951094 AGCAAGAAGTCGACTTATAGAGGT 59.049 41.667 29.79 20.88 36.11 3.85
120 121 5.298276 AGAGCAAGAAGTCGACTTATAGAGG 59.702 44.000 29.79 17.35 36.11 3.69
121 122 6.371809 AGAGCAAGAAGTCGACTTATAGAG 57.628 41.667 29.79 19.84 36.11 2.43
122 123 7.012515 CCTTAGAGCAAGAAGTCGACTTATAGA 59.987 40.741 29.79 8.21 36.22 1.98
123 124 7.012515 TCCTTAGAGCAAGAAGTCGACTTATAG 59.987 40.741 29.79 21.35 36.22 1.31
124 125 6.827251 TCCTTAGAGCAAGAAGTCGACTTATA 59.173 38.462 29.79 8.71 36.22 0.98
125 126 5.652891 TCCTTAGAGCAAGAAGTCGACTTAT 59.347 40.000 29.79 24.61 36.22 1.73
126 127 5.008331 TCCTTAGAGCAAGAAGTCGACTTA 58.992 41.667 29.79 9.85 36.22 2.24
127 128 3.827302 TCCTTAGAGCAAGAAGTCGACTT 59.173 43.478 30.12 30.12 36.22 3.01
128 129 3.422796 TCCTTAGAGCAAGAAGTCGACT 58.577 45.455 13.58 13.58 36.22 4.18
129 130 3.440872 TCTCCTTAGAGCAAGAAGTCGAC 59.559 47.826 7.70 7.70 40.22 4.20
130 131 3.687125 TCTCCTTAGAGCAAGAAGTCGA 58.313 45.455 0.00 0.00 40.22 4.20
131 132 4.358851 CATCTCCTTAGAGCAAGAAGTCG 58.641 47.826 0.00 0.00 40.22 4.18
132 133 4.404073 TCCATCTCCTTAGAGCAAGAAGTC 59.596 45.833 0.00 0.00 40.22 3.01
133 134 4.161377 GTCCATCTCCTTAGAGCAAGAAGT 59.839 45.833 0.00 0.00 40.22 3.01
134 135 4.442753 GGTCCATCTCCTTAGAGCAAGAAG 60.443 50.000 0.00 0.00 40.22 2.85
135 136 3.452627 GGTCCATCTCCTTAGAGCAAGAA 59.547 47.826 0.00 0.00 40.22 2.52
136 137 3.034635 GGTCCATCTCCTTAGAGCAAGA 58.965 50.000 0.00 0.00 40.22 3.02
137 138 3.037549 AGGTCCATCTCCTTAGAGCAAG 58.962 50.000 0.00 0.00 40.22 4.01
138 139 3.121929 AGGTCCATCTCCTTAGAGCAA 57.878 47.619 0.00 0.00 40.22 3.91
139 140 2.856760 AGGTCCATCTCCTTAGAGCA 57.143 50.000 0.00 0.00 40.22 4.26
140 141 4.591072 ACAATAGGTCCATCTCCTTAGAGC 59.409 45.833 0.00 0.00 40.22 4.09
141 142 5.011533 CCACAATAGGTCCATCTCCTTAGAG 59.988 48.000 0.00 0.00 41.93 2.43
142 143 4.901849 CCACAATAGGTCCATCTCCTTAGA 59.098 45.833 0.00 0.00 36.60 2.10
143 144 4.656112 ACCACAATAGGTCCATCTCCTTAG 59.344 45.833 0.00 0.00 37.28 2.18
144 145 4.631234 ACCACAATAGGTCCATCTCCTTA 58.369 43.478 0.00 0.00 37.28 2.69
145 146 3.464828 ACCACAATAGGTCCATCTCCTT 58.535 45.455 0.00 0.00 37.28 3.36
146 147 3.136641 ACCACAATAGGTCCATCTCCT 57.863 47.619 0.00 0.00 37.28 3.69
155 156 7.266905 ACCATTACTTAAGACCACAATAGGT 57.733 36.000 10.09 7.68 46.82 3.08
156 157 7.610305 ACAACCATTACTTAAGACCACAATAGG 59.390 37.037 10.09 7.20 0.00 2.57
157 158 8.561738 ACAACCATTACTTAAGACCACAATAG 57.438 34.615 10.09 0.00 0.00 1.73
158 159 8.788806 CAACAACCATTACTTAAGACCACAATA 58.211 33.333 10.09 0.00 0.00 1.90
159 160 7.504238 TCAACAACCATTACTTAAGACCACAAT 59.496 33.333 10.09 0.00 0.00 2.71
160 161 6.829298 TCAACAACCATTACTTAAGACCACAA 59.171 34.615 10.09 0.00 0.00 3.33
161 162 6.358178 TCAACAACCATTACTTAAGACCACA 58.642 36.000 10.09 0.00 0.00 4.17
162 163 6.485648 ACTCAACAACCATTACTTAAGACCAC 59.514 38.462 10.09 0.00 0.00 4.16
163 164 6.597562 ACTCAACAACCATTACTTAAGACCA 58.402 36.000 10.09 0.00 0.00 4.02
164 165 7.506328 AACTCAACAACCATTACTTAAGACC 57.494 36.000 10.09 0.00 0.00 3.85
168 169 8.780249 GCTCTTAACTCAACAACCATTACTTAA 58.220 33.333 0.00 0.00 0.00 1.85
169 170 7.934665 TGCTCTTAACTCAACAACCATTACTTA 59.065 33.333 0.00 0.00 0.00 2.24
170 171 6.770785 TGCTCTTAACTCAACAACCATTACTT 59.229 34.615 0.00 0.00 0.00 2.24
171 172 6.296026 TGCTCTTAACTCAACAACCATTACT 58.704 36.000 0.00 0.00 0.00 2.24
172 173 6.554334 TGCTCTTAACTCAACAACCATTAC 57.446 37.500 0.00 0.00 0.00 1.89
173 174 6.714810 ACATGCTCTTAACTCAACAACCATTA 59.285 34.615 0.00 0.00 0.00 1.90
174 175 5.536161 ACATGCTCTTAACTCAACAACCATT 59.464 36.000 0.00 0.00 0.00 3.16
175 176 5.048504 CACATGCTCTTAACTCAACAACCAT 60.049 40.000 0.00 0.00 0.00 3.55
176 177 4.275689 CACATGCTCTTAACTCAACAACCA 59.724 41.667 0.00 0.00 0.00 3.67
177 178 4.275936 ACACATGCTCTTAACTCAACAACC 59.724 41.667 0.00 0.00 0.00 3.77
178 179 5.424121 ACACATGCTCTTAACTCAACAAC 57.576 39.130 0.00 0.00 0.00 3.32
179 180 7.228507 ACATAACACATGCTCTTAACTCAACAA 59.771 33.333 0.00 0.00 0.00 2.83
180 181 6.710295 ACATAACACATGCTCTTAACTCAACA 59.290 34.615 0.00 0.00 0.00 3.33
181 182 7.133891 ACATAACACATGCTCTTAACTCAAC 57.866 36.000 0.00 0.00 0.00 3.18
182 183 7.744087 AACATAACACATGCTCTTAACTCAA 57.256 32.000 0.00 0.00 0.00 3.02
183 184 7.744087 AAACATAACACATGCTCTTAACTCA 57.256 32.000 0.00 0.00 0.00 3.41
184 185 8.507249 AGAAAACATAACACATGCTCTTAACTC 58.493 33.333 0.00 0.00 0.00 3.01
185 186 8.396272 AGAAAACATAACACATGCTCTTAACT 57.604 30.769 0.00 0.00 0.00 2.24
186 187 8.507249 AGAGAAAACATAACACATGCTCTTAAC 58.493 33.333 0.00 0.00 0.00 2.01
187 188 8.621532 AGAGAAAACATAACACATGCTCTTAA 57.378 30.769 0.00 0.00 0.00 1.85
188 189 7.334421 GGAGAGAAAACATAACACATGCTCTTA 59.666 37.037 0.00 0.00 31.02 2.10
189 190 6.150140 GGAGAGAAAACATAACACATGCTCTT 59.850 38.462 0.00 0.00 31.02 2.85
190 191 5.645497 GGAGAGAAAACATAACACATGCTCT 59.355 40.000 0.00 0.00 33.32 4.09
191 192 5.163713 GGGAGAGAAAACATAACACATGCTC 60.164 44.000 0.00 0.00 0.00 4.26
192 193 4.702131 GGGAGAGAAAACATAACACATGCT 59.298 41.667 0.00 0.00 0.00 3.79
193 194 4.437390 CGGGAGAGAAAACATAACACATGC 60.437 45.833 0.00 0.00 0.00 4.06
194 195 4.695455 ACGGGAGAGAAAACATAACACATG 59.305 41.667 0.00 0.00 0.00 3.21
195 196 4.906618 ACGGGAGAGAAAACATAACACAT 58.093 39.130 0.00 0.00 0.00 3.21
196 197 4.345859 ACGGGAGAGAAAACATAACACA 57.654 40.909 0.00 0.00 0.00 3.72
197 198 4.612939 GCAACGGGAGAGAAAACATAACAC 60.613 45.833 0.00 0.00 0.00 3.32
198 199 3.500680 GCAACGGGAGAGAAAACATAACA 59.499 43.478 0.00 0.00 0.00 2.41
199 200 3.500680 TGCAACGGGAGAGAAAACATAAC 59.499 43.478 0.00 0.00 0.00 1.89
200 201 3.745799 TGCAACGGGAGAGAAAACATAA 58.254 40.909 0.00 0.00 0.00 1.90
201 202 3.410631 TGCAACGGGAGAGAAAACATA 57.589 42.857 0.00 0.00 0.00 2.29
202 203 2.270352 TGCAACGGGAGAGAAAACAT 57.730 45.000 0.00 0.00 0.00 2.71
203 204 1.673920 GTTGCAACGGGAGAGAAAACA 59.326 47.619 14.90 0.00 0.00 2.83
204 205 2.401017 GTTGCAACGGGAGAGAAAAC 57.599 50.000 14.90 0.00 0.00 2.43
216 217 4.683334 GAGCCCGTGCGTTGCAAC 62.683 66.667 19.89 19.89 41.47 4.17
217 218 4.927782 AGAGCCCGTGCGTTGCAA 62.928 61.111 0.00 0.00 41.47 4.08
218 219 4.927782 AAGAGCCCGTGCGTTGCA 62.928 61.111 6.22 0.00 44.33 4.08
219 220 3.194272 AAAAGAGCCCGTGCGTTGC 62.194 57.895 0.00 0.00 44.33 4.17
220 221 1.370414 CAAAAGAGCCCGTGCGTTG 60.370 57.895 0.00 0.00 44.33 4.10
221 222 3.030652 CAAAAGAGCCCGTGCGTT 58.969 55.556 0.00 0.00 44.33 4.84
222 223 2.725203 TAGCAAAAGAGCCCGTGCGT 62.725 55.000 0.00 0.00 44.33 5.24
223 224 1.970917 CTAGCAAAAGAGCCCGTGCG 61.971 60.000 0.00 0.00 44.33 5.34
224 225 0.955919 ACTAGCAAAAGAGCCCGTGC 60.956 55.000 0.00 0.00 37.26 5.34
225 226 1.523758 AACTAGCAAAAGAGCCCGTG 58.476 50.000 0.00 0.00 34.23 4.94
226 227 2.038033 TGTAACTAGCAAAAGAGCCCGT 59.962 45.455 0.00 0.00 34.23 5.28
227 228 2.415512 GTGTAACTAGCAAAAGAGCCCG 59.584 50.000 0.00 0.00 34.23 6.13
228 229 3.408634 TGTGTAACTAGCAAAAGAGCCC 58.591 45.455 0.00 0.00 38.04 5.19
229 230 5.432885 TTTGTGTAACTAGCAAAAGAGCC 57.567 39.130 0.00 0.00 38.04 4.70
234 235 6.857956 TGAAGCTTTTGTGTAACTAGCAAAA 58.142 32.000 0.00 0.00 38.36 2.44
235 236 6.443934 TGAAGCTTTTGTGTAACTAGCAAA 57.556 33.333 0.00 0.00 38.36 3.68
236 237 6.633500 ATGAAGCTTTTGTGTAACTAGCAA 57.367 33.333 0.00 0.00 38.36 3.91
237 238 6.039270 ACAATGAAGCTTTTGTGTAACTAGCA 59.961 34.615 14.28 0.00 38.36 3.49
238 239 6.438763 ACAATGAAGCTTTTGTGTAACTAGC 58.561 36.000 14.28 0.00 38.04 3.42
239 240 8.774586 ACTACAATGAAGCTTTTGTGTAACTAG 58.225 33.333 21.47 13.97 36.75 2.57
240 241 8.671384 ACTACAATGAAGCTTTTGTGTAACTA 57.329 30.769 21.47 4.81 36.75 2.24
241 242 7.568199 ACTACAATGAAGCTTTTGTGTAACT 57.432 32.000 21.47 7.28 36.75 2.24
242 243 9.382244 CTAACTACAATGAAGCTTTTGTGTAAC 57.618 33.333 21.47 0.00 36.75 2.50
245 246 7.801716 TCTAACTACAATGAAGCTTTTGTGT 57.198 32.000 21.47 16.95 36.75 3.72
266 267 7.201609 CGCCAAACAATTTGCTACTCTATTCTA 60.202 37.037 0.00 0.00 39.31 2.10
274 275 3.146066 TCTCGCCAAACAATTTGCTACT 58.854 40.909 0.00 0.00 39.31 2.57
281 282 2.423538 GGCTGTATCTCGCCAAACAATT 59.576 45.455 0.00 0.00 45.59 2.32
298 299 1.726322 GCTACGCTCGATACGGCTG 60.726 63.158 11.97 0.00 34.00 4.85
306 307 1.471287 ACATAGTTGTGCTACGCTCGA 59.529 47.619 0.00 0.00 33.85 4.04
318 319 5.282510 GCCGCCTATATAGCTACATAGTTG 58.717 45.833 16.08 8.86 0.00 3.16
320 321 3.890147 GGCCGCCTATATAGCTACATAGT 59.110 47.826 16.08 0.00 0.00 2.12
321 322 4.145807 AGGCCGCCTATATAGCTACATAG 58.854 47.826 11.25 11.47 28.47 2.23
323 324 3.033659 AGGCCGCCTATATAGCTACAT 57.966 47.619 11.25 0.00 28.47 2.29
335 336 2.044946 GGTTCATGAAGGCCGCCT 60.045 61.111 8.80 5.94 33.87 5.52
337 338 2.435938 TCGGTTCATGAAGGCCGC 60.436 61.111 25.15 8.23 43.45 6.53
359 360 9.174166 GAGGATTATAGAGTTACAAGGCAAAAA 57.826 33.333 0.00 0.00 0.00 1.94
363 364 5.831525 TCGAGGATTATAGAGTTACAAGGCA 59.168 40.000 0.00 0.00 0.00 4.75
364 365 6.328641 TCGAGGATTATAGAGTTACAAGGC 57.671 41.667 0.00 0.00 0.00 4.35
536 548 1.283793 CGGGCTTGTGCTTGAAGTG 59.716 57.895 0.00 0.00 39.59 3.16
537 549 1.898574 CCGGGCTTGTGCTTGAAGT 60.899 57.895 0.00 0.00 39.59 3.01
586 598 1.398451 CGACAATCCGAATATTGCGCC 60.398 52.381 4.18 0.00 39.93 6.53
600 612 1.518133 GCTGCTCGAGCTCGACAAT 60.518 57.895 33.84 0.00 45.21 2.71
924 1102 2.285083 CTCTCCTACACTCTCTGGACG 58.715 57.143 0.00 0.00 0.00 4.79
926 1104 3.186283 AGACTCTCCTACACTCTCTGGA 58.814 50.000 0.00 0.00 0.00 3.86
977 1155 2.279120 CTCTGTCGATCAGCCGGC 60.279 66.667 21.89 21.89 43.32 6.13
978 1156 2.279120 GCTCTGTCGATCAGCCGG 60.279 66.667 0.00 0.00 43.32 6.13
996 1174 3.551407 GACGGCCTCCCCATCTCC 61.551 72.222 0.00 0.00 0.00 3.71
997 1175 2.034048 GAAGACGGCCTCCCCATCTC 62.034 65.000 0.00 0.00 0.00 2.75
998 1176 2.041265 AAGACGGCCTCCCCATCT 59.959 61.111 0.00 0.00 0.00 2.90
1017 1198 3.414700 CACACCAGCTTCGCCGTC 61.415 66.667 0.00 0.00 0.00 4.79
1022 1203 3.716006 CCACGCACACCAGCTTCG 61.716 66.667 0.00 0.00 0.00 3.79
1087 1268 2.904866 CTCCTCCTCCGCCTCGAG 60.905 72.222 5.13 5.13 0.00 4.04
1089 1270 4.507916 TCCTCCTCCTCCGCCTCG 62.508 72.222 0.00 0.00 0.00 4.63
1394 1596 3.510719 GAGCTGCTATGAGATCGATTCC 58.489 50.000 0.15 0.00 0.00 3.01
1450 1657 4.376819 GCTCAAGAACACGATTCAGTCAAG 60.377 45.833 0.00 0.00 0.00 3.02
1522 1729 5.064707 CCTCTTTGTAACCATGGACATTACG 59.935 44.000 21.47 4.96 32.53 3.18
1548 1755 1.745087 GGACAGTCAGAGAGAGCTCAG 59.255 57.143 17.77 0.08 43.81 3.35
1877 2084 0.959553 TATTGCCGAACCCGCAAAAA 59.040 45.000 0.00 0.00 36.20 1.94
1878 2085 0.241481 GTATTGCCGAACCCGCAAAA 59.759 50.000 0.00 0.00 36.20 2.44
1879 2086 0.889638 TGTATTGCCGAACCCGCAAA 60.890 50.000 0.00 0.00 36.20 3.68
1880 2087 1.302383 CTGTATTGCCGAACCCGCAA 61.302 55.000 0.00 0.00 36.69 4.85
1881 2088 1.743623 CTGTATTGCCGAACCCGCA 60.744 57.895 0.00 0.00 0.00 5.69
1882 2089 2.469516 CCTGTATTGCCGAACCCGC 61.470 63.158 0.00 0.00 0.00 6.13
1883 2090 2.469516 GCCTGTATTGCCGAACCCG 61.470 63.158 0.00 0.00 0.00 5.28
1884 2091 0.679960 AAGCCTGTATTGCCGAACCC 60.680 55.000 0.00 0.00 0.00 4.11
1885 2092 0.451783 CAAGCCTGTATTGCCGAACC 59.548 55.000 0.00 0.00 0.00 3.62
1886 2093 1.135689 CACAAGCCTGTATTGCCGAAC 60.136 52.381 0.00 0.00 33.22 3.95
1887 2094 1.164411 CACAAGCCTGTATTGCCGAA 58.836 50.000 0.00 0.00 33.22 4.30
1888 2095 1.305219 GCACAAGCCTGTATTGCCGA 61.305 55.000 0.00 0.00 33.22 5.54
1944 2151 7.377766 TGTGTTCCAAATCAAAGCTACTATC 57.622 36.000 0.00 0.00 0.00 2.08
1961 2171 4.576463 AGCGAGGAATTAATGATGTGTTCC 59.424 41.667 0.00 0.00 38.85 3.62
1978 2196 1.075542 TGCGATGTGTTTTAGCGAGG 58.924 50.000 0.00 0.00 0.00 4.63
1982 2200 2.495939 CGAGTTGCGATGTGTTTTAGC 58.504 47.619 0.00 0.00 44.57 3.09
1987 2205 1.305201 AAACCGAGTTGCGATGTGTT 58.695 45.000 0.00 0.00 44.57 3.32
1994 2212 6.806739 TGATGATATAGATAAACCGAGTTGCG 59.193 38.462 0.00 0.00 40.47 4.85
2032 2250 3.707316 TGGTTTGGATCTACCCATTTGG 58.293 45.455 8.91 0.00 35.87 3.28
2033 2251 5.203528 AGATGGTTTGGATCTACCCATTTG 58.796 41.667 9.90 0.00 36.08 2.32
2034 2252 5.449553 GAGATGGTTTGGATCTACCCATTT 58.550 41.667 9.90 5.60 36.08 2.32
2035 2253 4.444876 CGAGATGGTTTGGATCTACCCATT 60.445 45.833 9.90 2.75 36.08 3.16
2036 2254 3.071602 CGAGATGGTTTGGATCTACCCAT 59.928 47.826 8.68 8.68 38.58 4.00
2037 2255 2.434336 CGAGATGGTTTGGATCTACCCA 59.566 50.000 8.91 4.85 38.00 4.51
2038 2256 2.698797 TCGAGATGGTTTGGATCTACCC 59.301 50.000 8.91 0.00 38.00 3.69
2039 2257 3.492829 GGTCGAGATGGTTTGGATCTACC 60.493 52.174 0.00 0.00 39.54 3.18
2040 2258 3.718815 GGTCGAGATGGTTTGGATCTAC 58.281 50.000 0.00 0.00 29.97 2.59
2041 2259 2.361119 CGGTCGAGATGGTTTGGATCTA 59.639 50.000 0.00 0.00 29.97 1.98
2042 2260 1.137086 CGGTCGAGATGGTTTGGATCT 59.863 52.381 0.00 0.00 32.63 2.75
2043 2261 1.134788 ACGGTCGAGATGGTTTGGATC 60.135 52.381 0.00 0.00 0.00 3.36
2044 2262 0.902531 ACGGTCGAGATGGTTTGGAT 59.097 50.000 0.00 0.00 0.00 3.41
2045 2263 0.037697 CACGGTCGAGATGGTTTGGA 60.038 55.000 0.00 0.00 0.00 3.53
2046 2264 0.037697 TCACGGTCGAGATGGTTTGG 60.038 55.000 0.00 0.00 0.00 3.28
2047 2265 1.790755 TTCACGGTCGAGATGGTTTG 58.209 50.000 0.00 0.00 0.00 2.93
2048 2266 2.140717 GTTTCACGGTCGAGATGGTTT 58.859 47.619 0.00 0.00 0.00 3.27
2049 2267 1.607251 GGTTTCACGGTCGAGATGGTT 60.607 52.381 0.00 0.00 0.00 3.67
2050 2268 0.037605 GGTTTCACGGTCGAGATGGT 60.038 55.000 0.00 0.00 0.00 3.55
2051 2269 0.037697 TGGTTTCACGGTCGAGATGG 60.038 55.000 0.00 0.00 0.00 3.51
2052 2270 1.660607 CATGGTTTCACGGTCGAGATG 59.339 52.381 0.00 0.00 0.00 2.90
2053 2271 1.275291 ACATGGTTTCACGGTCGAGAT 59.725 47.619 0.00 0.00 0.00 2.75
2054 2272 0.677288 ACATGGTTTCACGGTCGAGA 59.323 50.000 0.00 0.00 0.00 4.04
2055 2273 1.508632 AACATGGTTTCACGGTCGAG 58.491 50.000 0.00 0.00 0.00 4.04
2056 2274 2.816204 TAACATGGTTTCACGGTCGA 57.184 45.000 0.00 0.00 0.00 4.20
2057 2275 3.259064 AGATAACATGGTTTCACGGTCG 58.741 45.455 3.95 0.00 0.00 4.79
2058 2276 4.270325 GCTAGATAACATGGTTTCACGGTC 59.730 45.833 3.95 0.00 0.00 4.79
2059 2277 4.189231 GCTAGATAACATGGTTTCACGGT 58.811 43.478 3.95 0.00 0.00 4.83
2060 2278 3.245284 CGCTAGATAACATGGTTTCACGG 59.755 47.826 3.95 0.00 0.00 4.94
2061 2279 3.245284 CCGCTAGATAACATGGTTTCACG 59.755 47.826 3.95 4.53 0.00 4.35
2062 2280 4.189231 ACCGCTAGATAACATGGTTTCAC 58.811 43.478 3.95 0.00 0.00 3.18
2063 2281 4.481368 ACCGCTAGATAACATGGTTTCA 57.519 40.909 3.95 0.00 0.00 2.69
2064 2282 4.873827 TGAACCGCTAGATAACATGGTTTC 59.126 41.667 0.00 0.00 39.65 2.78
2065 2283 4.839121 TGAACCGCTAGATAACATGGTTT 58.161 39.130 0.00 0.00 39.65 3.27
2066 2284 4.481368 TGAACCGCTAGATAACATGGTT 57.519 40.909 0.00 0.00 42.08 3.67
2067 2285 4.481368 TTGAACCGCTAGATAACATGGT 57.519 40.909 0.00 0.00 0.00 3.55
2068 2286 5.333339 CGATTTGAACCGCTAGATAACATGG 60.333 44.000 0.00 0.00 0.00 3.66
2069 2287 5.670097 CGATTTGAACCGCTAGATAACATG 58.330 41.667 0.00 0.00 0.00 3.21
2070 2288 4.211374 GCGATTTGAACCGCTAGATAACAT 59.789 41.667 0.00 0.00 46.96 2.71
2071 2289 3.554324 GCGATTTGAACCGCTAGATAACA 59.446 43.478 0.00 0.00 46.96 2.41
2072 2290 4.116713 GCGATTTGAACCGCTAGATAAC 57.883 45.455 0.00 0.00 46.96 1.89
2081 2299 3.201726 ACATTGAAGCGATTTGAACCG 57.798 42.857 0.00 0.00 0.00 4.44
2082 2300 4.545610 TCAACATTGAAGCGATTTGAACC 58.454 39.130 0.00 0.00 33.55 3.62
2083 2301 4.089065 GCTCAACATTGAAGCGATTTGAAC 59.911 41.667 0.00 0.00 36.64 3.18
2084 2302 4.229096 GCTCAACATTGAAGCGATTTGAA 58.771 39.130 0.00 0.00 36.64 2.69
2085 2303 3.252944 TGCTCAACATTGAAGCGATTTGA 59.747 39.130 0.00 0.00 36.64 2.69
2086 2304 3.362831 GTGCTCAACATTGAAGCGATTTG 59.637 43.478 0.00 0.00 36.64 2.32
2087 2305 3.568538 GTGCTCAACATTGAAGCGATTT 58.431 40.909 0.00 0.00 36.64 2.17
2088 2306 2.095059 GGTGCTCAACATTGAAGCGATT 60.095 45.455 0.00 0.00 36.64 3.34
2089 2307 1.470098 GGTGCTCAACATTGAAGCGAT 59.530 47.619 0.00 0.00 36.64 4.58
2090 2308 0.874390 GGTGCTCAACATTGAAGCGA 59.126 50.000 0.00 0.00 36.64 4.93
2091 2309 0.592637 TGGTGCTCAACATTGAAGCG 59.407 50.000 0.00 0.00 36.64 4.68
2092 2310 2.796593 GTTTGGTGCTCAACATTGAAGC 59.203 45.455 0.00 3.10 36.64 3.86
2093 2311 3.798337 GTGTTTGGTGCTCAACATTGAAG 59.202 43.478 0.00 0.00 36.64 3.02
2094 2312 3.733380 CGTGTTTGGTGCTCAACATTGAA 60.733 43.478 0.00 0.00 36.64 2.69
2095 2313 2.223456 CGTGTTTGGTGCTCAACATTGA 60.223 45.455 0.00 0.00 34.67 2.57
2096 2314 2.118683 CGTGTTTGGTGCTCAACATTG 58.881 47.619 0.00 0.00 34.67 2.82
2097 2315 1.748493 ACGTGTTTGGTGCTCAACATT 59.252 42.857 0.00 0.00 34.67 2.71
2098 2316 1.333619 GACGTGTTTGGTGCTCAACAT 59.666 47.619 0.00 0.00 34.67 2.71
2099 2317 0.730265 GACGTGTTTGGTGCTCAACA 59.270 50.000 0.00 0.00 34.67 3.33
2100 2318 1.014352 AGACGTGTTTGGTGCTCAAC 58.986 50.000 0.00 0.00 34.67 3.18
2101 2319 2.605837 TAGACGTGTTTGGTGCTCAA 57.394 45.000 0.00 0.00 0.00 3.02
2102 2320 2.206750 GTTAGACGTGTTTGGTGCTCA 58.793 47.619 0.00 0.00 0.00 4.26
2103 2321 1.191647 CGTTAGACGTGTTTGGTGCTC 59.808 52.381 0.00 0.00 36.74 4.26
2104 2322 1.214367 CGTTAGACGTGTTTGGTGCT 58.786 50.000 0.00 0.00 36.74 4.40
2105 2323 0.383860 GCGTTAGACGTGTTTGGTGC 60.384 55.000 0.00 0.00 44.73 5.01
2106 2324 1.191647 GAGCGTTAGACGTGTTTGGTG 59.808 52.381 0.00 0.00 44.73 4.17
2107 2325 1.068127 AGAGCGTTAGACGTGTTTGGT 59.932 47.619 0.00 0.00 44.73 3.67
2108 2326 1.779569 AGAGCGTTAGACGTGTTTGG 58.220 50.000 0.00 0.00 44.73 3.28
2109 2327 5.511088 AATTAGAGCGTTAGACGTGTTTG 57.489 39.130 0.00 0.00 44.73 2.93
2110 2328 5.574443 GGTAATTAGAGCGTTAGACGTGTTT 59.426 40.000 0.00 0.00 44.73 2.83
2111 2329 5.098211 GGTAATTAGAGCGTTAGACGTGTT 58.902 41.667 0.00 0.00 44.73 3.32
2112 2330 4.439289 GGGTAATTAGAGCGTTAGACGTGT 60.439 45.833 0.00 0.00 44.73 4.49
2113 2331 4.040376 GGGTAATTAGAGCGTTAGACGTG 58.960 47.826 0.00 0.00 44.73 4.49
2114 2332 3.696051 TGGGTAATTAGAGCGTTAGACGT 59.304 43.478 0.00 0.00 44.73 4.34
2115 2333 4.040376 GTGGGTAATTAGAGCGTTAGACG 58.960 47.826 0.00 0.00 45.88 4.18
2116 2334 4.142093 TGGTGGGTAATTAGAGCGTTAGAC 60.142 45.833 0.00 0.00 0.00 2.59
2117 2335 4.025360 TGGTGGGTAATTAGAGCGTTAGA 58.975 43.478 0.00 0.00 0.00 2.10
2118 2336 4.117685 GTGGTGGGTAATTAGAGCGTTAG 58.882 47.826 0.00 0.00 0.00 2.34
2119 2337 3.770933 AGTGGTGGGTAATTAGAGCGTTA 59.229 43.478 0.00 0.00 0.00 3.18
2120 2338 2.570302 AGTGGTGGGTAATTAGAGCGTT 59.430 45.455 0.00 0.00 0.00 4.84
2121 2339 2.093658 CAGTGGTGGGTAATTAGAGCGT 60.094 50.000 0.00 0.00 0.00 5.07
2122 2340 2.550978 CAGTGGTGGGTAATTAGAGCG 58.449 52.381 0.00 0.00 0.00 5.03
2123 2341 2.289565 GCAGTGGTGGGTAATTAGAGC 58.710 52.381 0.00 0.00 0.00 4.09
2124 2342 2.238646 TGGCAGTGGTGGGTAATTAGAG 59.761 50.000 0.00 0.00 0.00 2.43
2125 2343 2.270858 TGGCAGTGGTGGGTAATTAGA 58.729 47.619 0.00 0.00 0.00 2.10
2126 2344 2.799126 TGGCAGTGGTGGGTAATTAG 57.201 50.000 0.00 0.00 0.00 1.73
2127 2345 3.010696 TCAATGGCAGTGGTGGGTAATTA 59.989 43.478 15.62 0.00 0.00 1.40
2128 2346 2.178580 CAATGGCAGTGGTGGGTAATT 58.821 47.619 7.12 0.00 0.00 1.40
2129 2347 1.357420 TCAATGGCAGTGGTGGGTAAT 59.643 47.619 15.62 0.00 0.00 1.89
2130 2348 0.774276 TCAATGGCAGTGGTGGGTAA 59.226 50.000 15.62 0.00 0.00 2.85
2131 2349 0.998928 ATCAATGGCAGTGGTGGGTA 59.001 50.000 15.62 0.00 0.00 3.69
2132 2350 0.114954 AATCAATGGCAGTGGTGGGT 59.885 50.000 15.62 0.00 0.00 4.51
2133 2351 2.142356 TAATCAATGGCAGTGGTGGG 57.858 50.000 15.62 0.00 0.00 4.61
2134 2352 5.126869 TGTTTATAATCAATGGCAGTGGTGG 59.873 40.000 15.62 0.00 0.00 4.61
2135 2353 6.035843 GTGTTTATAATCAATGGCAGTGGTG 58.964 40.000 15.62 0.00 0.00 4.17
2136 2354 5.163663 CGTGTTTATAATCAATGGCAGTGGT 60.164 40.000 15.62 4.62 0.00 4.16
2137 2355 5.163663 ACGTGTTTATAATCAATGGCAGTGG 60.164 40.000 15.62 0.00 0.00 4.00
2138 2356 5.879237 ACGTGTTTATAATCAATGGCAGTG 58.121 37.500 8.96 8.96 0.00 3.66
2139 2357 6.509418 AACGTGTTTATAATCAATGGCAGT 57.491 33.333 0.00 0.00 0.00 4.40
2140 2358 7.540400 TCAAAACGTGTTTATAATCAATGGCAG 59.460 33.333 0.00 0.00 31.63 4.85
2141 2359 7.327275 GTCAAAACGTGTTTATAATCAATGGCA 59.673 33.333 0.00 0.00 31.63 4.92
2142 2360 7.540745 AGTCAAAACGTGTTTATAATCAATGGC 59.459 33.333 0.00 0.00 31.63 4.40
2143 2361 8.964420 AGTCAAAACGTGTTTATAATCAATGG 57.036 30.769 0.00 0.00 31.63 3.16
2144 2362 9.605955 TGAGTCAAAACGTGTTTATAATCAATG 57.394 29.630 0.00 0.00 31.63 2.82
2146 2364 9.440784 GTTGAGTCAAAACGTGTTTATAATCAA 57.559 29.630 7.25 13.88 33.33 2.57
2147 2365 7.794810 CGTTGAGTCAAAACGTGTTTATAATCA 59.205 33.333 7.25 2.89 44.07 2.57
2148 2366 8.131082 CGTTGAGTCAAAACGTGTTTATAATC 57.869 34.615 7.25 0.48 44.07 1.75
2160 2378 3.335579 AGGGATAGCGTTGAGTCAAAAC 58.664 45.455 7.25 2.62 0.00 2.43
2161 2379 3.695830 AGGGATAGCGTTGAGTCAAAA 57.304 42.857 7.25 0.00 0.00 2.44
2162 2380 3.007506 TCAAGGGATAGCGTTGAGTCAAA 59.992 43.478 7.25 0.00 0.00 2.69
2163 2381 2.565391 TCAAGGGATAGCGTTGAGTCAA 59.435 45.455 0.08 0.08 0.00 3.18
2164 2382 2.176045 TCAAGGGATAGCGTTGAGTCA 58.824 47.619 0.00 0.00 0.00 3.41
2165 2383 2.961526 TCAAGGGATAGCGTTGAGTC 57.038 50.000 0.00 0.00 0.00 3.36
2166 2384 3.695830 TTTCAAGGGATAGCGTTGAGT 57.304 42.857 0.00 0.00 32.00 3.41
2167 2385 4.272018 CAGATTTCAAGGGATAGCGTTGAG 59.728 45.833 0.00 0.00 32.00 3.02
2168 2386 4.191544 CAGATTTCAAGGGATAGCGTTGA 58.808 43.478 0.00 0.00 0.00 3.18
2169 2387 3.242870 GCAGATTTCAAGGGATAGCGTTG 60.243 47.826 0.00 0.00 0.00 4.10
2170 2388 2.945668 GCAGATTTCAAGGGATAGCGTT 59.054 45.455 0.00 0.00 0.00 4.84
2171 2389 2.565841 GCAGATTTCAAGGGATAGCGT 58.434 47.619 0.00 0.00 0.00 5.07
2172 2390 1.876156 GGCAGATTTCAAGGGATAGCG 59.124 52.381 0.00 0.00 0.00 4.26
2173 2391 2.936202 TGGCAGATTTCAAGGGATAGC 58.064 47.619 0.00 0.00 0.00 2.97
2174 2392 4.467769 ACATGGCAGATTTCAAGGGATAG 58.532 43.478 0.00 0.00 0.00 2.08
2175 2393 4.524802 ACATGGCAGATTTCAAGGGATA 57.475 40.909 0.00 0.00 0.00 2.59
2176 2394 3.393426 ACATGGCAGATTTCAAGGGAT 57.607 42.857 0.00 0.00 0.00 3.85
2177 2395 2.905415 ACATGGCAGATTTCAAGGGA 57.095 45.000 0.00 0.00 0.00 4.20
2178 2396 5.603170 AATTACATGGCAGATTTCAAGGG 57.397 39.130 0.00 0.00 0.00 3.95
2182 2400 9.812347 AGGATATTAATTACATGGCAGATTTCA 57.188 29.630 0.00 0.00 0.00 2.69
2200 2418 9.991906 CTTTTTCGTGGGAATAGTAGGATATTA 57.008 33.333 0.00 0.00 30.88 0.98
2201 2419 8.491958 ACTTTTTCGTGGGAATAGTAGGATATT 58.508 33.333 0.00 0.00 30.28 1.28
2202 2420 8.030913 ACTTTTTCGTGGGAATAGTAGGATAT 57.969 34.615 0.00 0.00 30.28 1.63
2203 2421 7.427989 ACTTTTTCGTGGGAATAGTAGGATA 57.572 36.000 0.00 0.00 30.28 2.59
2204 2422 6.309389 ACTTTTTCGTGGGAATAGTAGGAT 57.691 37.500 0.00 0.00 30.28 3.24
2205 2423 5.750352 ACTTTTTCGTGGGAATAGTAGGA 57.250 39.130 0.00 0.00 30.28 2.94
2206 2424 8.395633 CAATTACTTTTTCGTGGGAATAGTAGG 58.604 37.037 0.00 0.00 34.21 3.18
2207 2425 9.158233 TCAATTACTTTTTCGTGGGAATAGTAG 57.842 33.333 0.00 0.00 34.21 2.57
2208 2426 9.675464 ATCAATTACTTTTTCGTGGGAATAGTA 57.325 29.630 0.00 0.00 32.75 1.82
2209 2427 7.989416 TCAATTACTTTTTCGTGGGAATAGT 57.011 32.000 0.00 0.00 34.09 2.12
2212 2430 9.408648 AGATATCAATTACTTTTTCGTGGGAAT 57.591 29.630 5.32 0.00 30.88 3.01
2213 2431 8.801882 AGATATCAATTACTTTTTCGTGGGAA 57.198 30.769 5.32 0.00 0.00 3.97
2214 2432 8.801882 AAGATATCAATTACTTTTTCGTGGGA 57.198 30.769 5.32 0.00 0.00 4.37
2215 2433 9.931210 GTAAGATATCAATTACTTTTTCGTGGG 57.069 33.333 5.32 0.00 0.00 4.61
2216 2434 9.931210 GGTAAGATATCAATTACTTTTTCGTGG 57.069 33.333 5.32 0.00 33.36 4.94
2230 2448 8.556194 GCACGTTGATATTTGGTAAGATATCAA 58.444 33.333 5.32 12.34 45.70 2.57
2231 2449 7.713073 TGCACGTTGATATTTGGTAAGATATCA 59.287 33.333 5.32 2.78 41.21 2.15
2232 2450 8.083462 TGCACGTTGATATTTGGTAAGATATC 57.917 34.615 0.00 0.00 36.33 1.63
2233 2451 8.342634 GTTGCACGTTGATATTTGGTAAGATAT 58.657 33.333 0.00 0.00 0.00 1.63
2234 2452 7.334671 TGTTGCACGTTGATATTTGGTAAGATA 59.665 33.333 0.00 0.00 0.00 1.98
2235 2453 6.150307 TGTTGCACGTTGATATTTGGTAAGAT 59.850 34.615 0.00 0.00 0.00 2.40
2236 2454 5.470437 TGTTGCACGTTGATATTTGGTAAGA 59.530 36.000 0.00 0.00 0.00 2.10
2237 2455 5.694816 TGTTGCACGTTGATATTTGGTAAG 58.305 37.500 0.00 0.00 0.00 2.34
2238 2456 5.470437 TCTGTTGCACGTTGATATTTGGTAA 59.530 36.000 0.00 0.00 0.00 2.85
2239 2457 4.998033 TCTGTTGCACGTTGATATTTGGTA 59.002 37.500 0.00 0.00 0.00 3.25
2240 2458 3.818210 TCTGTTGCACGTTGATATTTGGT 59.182 39.130 0.00 0.00 0.00 3.67
2241 2459 4.418013 TCTGTTGCACGTTGATATTTGG 57.582 40.909 0.00 0.00 0.00 3.28
2242 2460 9.533983 GATATATCTGTTGCACGTTGATATTTG 57.466 33.333 5.42 0.00 33.84 2.32
2243 2461 9.494271 AGATATATCTGTTGCACGTTGATATTT 57.506 29.630 14.60 7.77 35.42 1.40
2244 2462 9.494271 AAGATATATCTGTTGCACGTTGATATT 57.506 29.630 16.01 0.00 37.19 1.28
2246 2464 9.406828 GTAAGATATATCTGTTGCACGTTGATA 57.593 33.333 16.01 0.00 37.19 2.15
2247 2465 7.385205 GGTAAGATATATCTGTTGCACGTTGAT 59.615 37.037 16.01 0.00 37.19 2.57
2248 2466 6.700081 GGTAAGATATATCTGTTGCACGTTGA 59.300 38.462 16.01 0.00 37.19 3.18
2249 2467 6.701841 AGGTAAGATATATCTGTTGCACGTTG 59.298 38.462 16.01 0.00 37.19 4.10
2250 2468 6.817184 AGGTAAGATATATCTGTTGCACGTT 58.183 36.000 16.01 0.00 37.19 3.99
2251 2469 6.406692 AGGTAAGATATATCTGTTGCACGT 57.593 37.500 16.01 8.08 37.19 4.49
2252 2470 8.988064 ATTAGGTAAGATATATCTGTTGCACG 57.012 34.615 16.01 0.00 37.19 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.