Multiple sequence alignment - TraesCS4A01G008600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G008600 chr4A 100.000 3374 0 0 1 3374 5192110 5195483 0.000000e+00 6231.0
1 TraesCS4A01G008600 chr4A 100.000 1901 0 0 7864 9764 5199973 5201873 0.000000e+00 3511.0
2 TraesCS4A01G008600 chr4A 100.000 1861 0 0 3927 5787 5196036 5197896 0.000000e+00 3437.0
3 TraesCS4A01G008600 chr4A 96.767 1763 55 2 4026 5787 538883106 538881345 0.000000e+00 2939.0
4 TraesCS4A01G008600 chr4A 96.840 1677 53 0 1666 3342 538885414 538883738 0.000000e+00 2804.0
5 TraesCS4A01G008600 chr4A 100.000 826 0 0 6345 7170 5198454 5199279 0.000000e+00 1526.0
6 TraesCS4A01G008600 chr4A 95.553 832 31 1 6345 7170 602887819 602886988 0.000000e+00 1327.0
7 TraesCS4A01G008600 chr4A 86.260 655 48 24 8140 8759 5122675 5123322 0.000000e+00 673.0
8 TraesCS4A01G008600 chr4A 94.643 56 3 0 458 513 205345036 205345091 4.860000e-13 87.9
9 TraesCS4A01G008600 chr3A 96.133 1862 67 2 3927 5787 735414666 735416523 0.000000e+00 3035.0
10 TraesCS4A01G008600 chr3A 94.868 1851 82 3 1459 3309 686575002 686576839 0.000000e+00 2880.0
11 TraesCS4A01G008600 chr3A 97.337 1652 43 1 1667 3318 735412508 735414158 0.000000e+00 2806.0
12 TraesCS4A01G008600 chr3A 91.782 1874 139 6 1459 3330 99244620 99246480 0.000000e+00 2593.0
13 TraesCS4A01G008600 chr3A 90.933 1908 152 4 1459 3366 382733628 382731742 0.000000e+00 2545.0
14 TraesCS4A01G008600 chr3A 96.178 811 31 0 6348 7158 735416579 735417389 0.000000e+00 1327.0
15 TraesCS4A01G008600 chr3A 91.750 400 33 0 1001 1400 570114040 570114439 3.080000e-154 556.0
16 TraesCS4A01G008600 chr3A 92.112 393 31 0 1001 1393 569890845 569891237 1.110000e-153 555.0
17 TraesCS4A01G008600 chr3A 94.937 158 7 1 1459 1616 745639112 745638956 7.570000e-61 246.0
18 TraesCS4A01G008600 chr3A 93.252 163 7 3 1454 1616 100409468 100409310 4.560000e-58 237.0
19 TraesCS4A01G008600 chr3A 92.638 163 10 2 1454 1616 739970381 739970541 5.900000e-57 233.0
20 TraesCS4A01G008600 chr6A 95.905 1856 74 2 3927 5781 616406763 616404909 0.000000e+00 3005.0
21 TraesCS4A01G008600 chr6A 95.779 1848 77 1 3927 5773 100484997 100483150 0.000000e+00 2979.0
22 TraesCS4A01G008600 chr6A 96.034 1740 57 2 1635 3374 100486884 100485157 0.000000e+00 2820.0
23 TraesCS4A01G008600 chr6A 95.972 1738 58 7 1647 3372 616408617 616406880 0.000000e+00 2811.0
24 TraesCS4A01G008600 chr6A 91.501 1906 155 3 1459 3361 51391596 51393497 0.000000e+00 2615.0
25 TraesCS4A01G008600 chr6A 95.326 813 36 2 6345 7157 616404180 616403370 0.000000e+00 1290.0
26 TraesCS4A01G008600 chr6A 92.531 241 12 3 7864 8104 100481846 100481612 3.380000e-89 340.0
27 TraesCS4A01G008600 chr6A 92.857 42 1 1 9242 9283 614693434 614693473 1.060000e-04 60.2
28 TraesCS4A01G008600 chr7A 97.005 1703 51 0 1672 3374 734129972 734128270 0.000000e+00 2863.0
29 TraesCS4A01G008600 chr7A 93.502 1862 114 5 3927 5787 671365777 671363922 0.000000e+00 2761.0
30 TraesCS4A01G008600 chr7A 93.179 1862 120 5 3928 5787 697106262 697104406 0.000000e+00 2728.0
31 TraesCS4A01G008600 chr7A 96.182 812 31 0 6355 7166 734125309 734124498 0.000000e+00 1328.0
32 TraesCS4A01G008600 chr7A 92.537 335 12 1 9443 9764 150878986 150878652 1.480000e-127 468.0
33 TraesCS4A01G008600 chr7A 78.661 478 65 23 1 466 596326902 596327354 5.770000e-72 283.0
34 TraesCS4A01G008600 chr7A 76.633 398 53 23 1 367 139195318 139195706 6.020000e-42 183.0
35 TraesCS4A01G008600 chr5A 93.881 1863 109 3 3927 5787 708086236 708084377 0.000000e+00 2804.0
36 TraesCS4A01G008600 chr5A 91.667 264 21 1 534 796 628790096 628789833 2.000000e-96 364.0
37 TraesCS4A01G008600 chr3B 92.977 1908 123 5 1459 3366 812797961 812796065 0.000000e+00 2771.0
38 TraesCS4A01G008600 chr3B 92.911 1848 119 1 1459 3306 711732457 711734292 0.000000e+00 2676.0
39 TraesCS4A01G008600 chr3B 91.465 1863 152 1 1459 3321 44247019 44248874 0.000000e+00 2553.0
40 TraesCS4A01G008600 chr3B 91.039 1886 136 3 1459 3344 549025986 549027838 0.000000e+00 2516.0
41 TraesCS4A01G008600 chr3B 91.500 400 32 1 1000 1397 564759138 564759537 5.150000e-152 549.0
42 TraesCS4A01G008600 chr3B 88.923 325 34 2 8407 8730 564759828 564760151 5.490000e-107 399.0
43 TraesCS4A01G008600 chr3B 80.579 484 72 14 1 468 1024045 1024522 4.340000e-93 353.0
44 TraesCS4A01G008600 chr3B 93.644 236 15 0 7869 8104 44252893 44253128 4.340000e-93 353.0
45 TraesCS4A01G008600 chr3B 92.245 245 13 1 7866 8104 747783277 747783033 9.390000e-90 342.0
46 TraesCS4A01G008600 chr3B 95.706 163 6 1 1454 1616 747783193 747783032 2.700000e-65 261.0
47 TraesCS4A01G008600 chr3B 93.443 61 4 0 1631 1691 778493051 778493111 3.760000e-14 91.6
48 TraesCS4A01G008600 chr3B 82.979 94 13 3 9186 9279 592828427 592828517 2.260000e-11 82.4
49 TraesCS4A01G008600 chr3B 92.000 50 3 1 465 513 605277777 605277826 1.760000e-07 69.4
50 TraesCS4A01G008600 chr7B 93.319 1841 118 5 3948 5787 682396483 682394647 0.000000e+00 2713.0
51 TraesCS4A01G008600 chr7B 93.308 1838 118 5 3948 5784 126189740 126187907 0.000000e+00 2708.0
52 TraesCS4A01G008600 chr7B 91.414 1910 150 4 1459 3366 126191772 126189875 0.000000e+00 2606.0
53 TraesCS4A01G008600 chr7B 91.760 1869 142 3 1459 3327 725342772 725340916 0.000000e+00 2588.0
54 TraesCS4A01G008600 chr7B 93.808 323 14 4 9443 9764 750023536 750023219 1.910000e-131 481.0
55 TraesCS4A01G008600 chr7B 92.748 262 17 2 537 796 436122807 436122546 2.570000e-100 377.0
56 TraesCS4A01G008600 chr7B 92.045 264 20 1 537 799 598296407 598296144 4.310000e-98 370.0
57 TraesCS4A01G008600 chr1B 92.470 1899 136 2 1459 3357 46006962 46008853 0.000000e+00 2708.0
58 TraesCS4A01G008600 chr1B 94.872 819 38 4 6347 7161 642807634 642808452 0.000000e+00 1277.0
59 TraesCS4A01G008600 chr1B 92.793 333 11 5 9445 9764 352393672 352394004 4.130000e-128 470.0
60 TraesCS4A01G008600 chr1B 93.249 237 15 1 7867 8103 642808877 642809112 2.020000e-91 348.0
61 TraesCS4A01G008600 chr1A 92.296 1908 139 7 1459 3365 147698655 147696755 0.000000e+00 2702.0
62 TraesCS4A01G008600 chr1A 91.740 339 15 1 9439 9764 389070585 389070247 8.940000e-125 459.0
63 TraesCS4A01G008600 chr1A 97.727 44 1 0 470 513 400544005 400543962 1.050000e-09 76.8
64 TraesCS4A01G008600 chr5B 91.818 1870 141 1 1459 3328 551773678 551771821 0.000000e+00 2595.0
65 TraesCS4A01G008600 chr5B 91.161 1912 150 7 1459 3366 321030854 321028958 0.000000e+00 2577.0
66 TraesCS4A01G008600 chr5B 90.895 1900 157 3 1459 3357 561707006 561708890 0.000000e+00 2536.0
67 TraesCS4A01G008600 chr5B 90.422 1921 157 8 1459 3366 177846622 177848528 0.000000e+00 2503.0
68 TraesCS4A01G008600 chr5B 90.215 1911 149 7 1459 3366 355238968 355240843 0.000000e+00 2459.0
69 TraesCS4A01G008600 chr5B 94.660 824 41 3 6345 7166 177850484 177851306 0.000000e+00 1275.0
70 TraesCS4A01G008600 chr5B 94.660 824 37 4 6345 7166 91185616 91186434 0.000000e+00 1271.0
71 TraesCS4A01G008600 chr5B 94.111 832 43 1 6345 7170 321026731 321025900 0.000000e+00 1260.0
72 TraesCS4A01G008600 chr5B 93.220 236 16 0 7869 8104 702428791 702428556 2.020000e-91 348.0
73 TraesCS4A01G008600 chr5B 91.837 245 15 4 7865 8104 622563390 622563146 4.370000e-88 337.0
74 TraesCS4A01G008600 chr5B 94.479 163 8 1 1454 1616 561712143 561712304 5.850000e-62 250.0
75 TraesCS4A01G008600 chr5B 97.674 43 1 0 472 514 554891313 554891271 3.780000e-09 75.0
76 TraesCS4A01G008600 chr5B 97.674 43 1 0 471 513 680748238 680748196 3.780000e-09 75.0
77 TraesCS4A01G008600 chr2B 91.577 1864 144 2 1459 3321 788462651 788460800 0.000000e+00 2560.0
78 TraesCS4A01G008600 chr2B 90.574 1899 166 1 1459 3357 792294580 792292695 0.000000e+00 2503.0
79 TraesCS4A01G008600 chr2B 90.560 339 18 3 9440 9764 588286022 588286360 4.190000e-118 436.0
80 TraesCS4A01G008600 chr2B 90.476 336 19 5 9442 9764 237163242 237163577 1.950000e-116 431.0
81 TraesCS4A01G008600 chr2B 93.506 231 14 1 7875 8104 788457594 788457364 9.390000e-90 342.0
82 TraesCS4A01G008600 chr2B 100.000 28 0 0 3346 3373 233738133 233738160 1.800000e-02 52.8
83 TraesCS4A01G008600 chr4B 94.390 820 36 5 6354 7166 40528516 40527700 0.000000e+00 1251.0
84 TraesCS4A01G008600 chr4B 91.880 665 35 6 8432 9094 581951010 581950363 0.000000e+00 911.0
85 TraesCS4A01G008600 chr4B 94.689 546 18 4 922 1458 581956223 581955680 0.000000e+00 837.0
86 TraesCS4A01G008600 chr4B 91.832 453 34 2 1007 1458 582023683 582023233 6.440000e-176 628.0
87 TraesCS4A01G008600 chr4B 86.207 609 48 20 8136 8721 582023199 582022604 2.310000e-175 627.0
88 TraesCS4A01G008600 chr4B 81.725 487 59 20 1 465 581958030 581957552 7.160000e-101 379.0
89 TraesCS4A01G008600 chr4B 93.506 231 15 0 7878 8108 40527052 40526822 2.610000e-90 344.0
90 TraesCS4A01G008600 chr4B 95.789 190 7 1 8136 8324 581955652 581955463 1.230000e-78 305.0
91 TraesCS4A01G008600 chr4B 77.778 477 85 15 1 464 667601728 667601260 3.470000e-69 274.0
92 TraesCS4A01G008600 chr4B 83.146 89 12 3 9195 9283 647035924 647036009 2.920000e-10 78.7
93 TraesCS4A01G008600 chr4D 91.792 597 24 10 886 1458 465162110 465161515 0.000000e+00 808.0
94 TraesCS4A01G008600 chr4D 90.588 595 33 4 886 1458 465185866 465185273 0.000000e+00 767.0
95 TraesCS4A01G008600 chr4D 87.410 691 36 27 8433 9109 465161180 465160527 0.000000e+00 747.0
96 TraesCS4A01G008600 chr4D 83.824 680 63 25 8113 8759 465351600 465350935 3.900000e-168 603.0
97 TraesCS4A01G008600 chr4D 93.247 385 26 0 1007 1391 465352004 465351620 1.420000e-157 568.0
98 TraesCS4A01G008600 chr4D 96.142 337 13 0 8433 8769 465157640 465157304 1.430000e-152 551.0
99 TraesCS4A01G008600 chr4D 96.886 289 9 0 8433 8721 465183709 465183421 1.470000e-132 484.0
100 TraesCS4A01G008600 chr4D 87.129 404 27 11 8765 9155 465156190 465155799 1.510000e-117 435.0
101 TraesCS4A01G008600 chr4D 82.463 479 48 16 1 468 465186990 465186537 4.280000e-103 387.0
102 TraesCS4A01G008600 chr4D 92.562 242 8 3 886 1118 465186483 465186243 1.210000e-88 339.0
103 TraesCS4A01G008600 chr4D 94.330 194 6 2 8136 8324 465161487 465161294 9.590000e-75 292.0
104 TraesCS4A01G008600 chr4D 93.229 192 8 2 8138 8324 465183993 465183802 2.690000e-70 278.0
105 TraesCS4A01G008600 chr4D 90.123 81 3 2 8249 8324 465157834 465157754 6.240000e-17 100.0
106 TraesCS4A01G008600 chr4D 97.619 42 1 0 472 513 11273112 11273153 1.360000e-08 73.1
107 TraesCS4A01G008600 chr3D 91.960 398 30 1 1002 1397 432513155 432513552 3.080000e-154 556.0
108 TraesCS4A01G008600 chr3D 89.744 312 31 1 8407 8718 432513833 432514143 1.980000e-106 398.0
109 TraesCS4A01G008600 chr3D 92.045 264 20 1 543 805 62813854 62813591 4.310000e-98 370.0
110 TraesCS4A01G008600 chr3D 92.015 263 20 1 535 796 91541208 91541470 1.550000e-97 368.0
111 TraesCS4A01G008600 chr3D 89.011 182 17 3 9584 9764 350118619 350118440 1.280000e-53 222.0
112 TraesCS4A01G008600 chr1D 92.105 266 19 2 535 799 365323991 365323727 3.330000e-99 374.0
113 TraesCS4A01G008600 chr1D 81.328 482 67 13 1 468 442153396 442153868 4.310000e-98 370.0
114 TraesCS4A01G008600 chr1D 79.167 480 73 17 3 468 340318537 340319003 3.430000e-79 307.0
115 TraesCS4A01G008600 chr1D 81.016 374 52 13 110 468 10034502 10034133 7.470000e-71 279.0
116 TraesCS4A01G008600 chr1D 93.182 44 3 0 9245 9288 293902964 293902921 2.280000e-06 65.8
117 TraesCS4A01G008600 chr2D 92.045 264 19 2 536 798 37526613 37526875 4.310000e-98 370.0
118 TraesCS4A01G008600 chr2D 89.199 287 25 5 515 796 402717330 402717615 4.340000e-93 353.0
119 TraesCS4A01G008600 chr2D 80.081 492 66 21 1 472 468174217 468174696 4.370000e-88 337.0
120 TraesCS4A01G008600 chr7D 89.753 283 26 3 529 808 557353907 557354189 9.320000e-95 359.0
121 TraesCS4A01G008600 chr7D 87.591 137 14 3 3 137 138505025 138504890 1.310000e-33 156.0
122 TraesCS4A01G008600 chr6B 92.797 236 17 0 7869 8104 704517360 704517125 9.390000e-90 342.0
123 TraesCS4A01G008600 chr5D 78.261 138 20 8 9139 9276 411594970 411595097 8.130000e-11 80.5
124 TraesCS4A01G008600 chr5D 95.745 47 1 1 471 516 213079863 213079817 3.780000e-09 75.0
125 TraesCS4A01G008600 chr5D 97.619 42 1 0 472 513 386265869 386265910 1.360000e-08 73.1
126 TraesCS4A01G008600 chrUn 97.619 42 1 0 472 513 258860829 258860870 1.360000e-08 73.1
127 TraesCS4A01G008600 chrUn 92.857 42 1 1 9242 9283 297825253 297825292 1.060000e-04 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G008600 chr4A 5192110 5201873 9763 False 3676.250000 6231 100.000000 1 9764 4 chr4A.!!$F3 9763
1 TraesCS4A01G008600 chr4A 538881345 538885414 4069 True 2871.500000 2939 96.803500 1666 5787 2 chr4A.!!$R2 4121
2 TraesCS4A01G008600 chr4A 602886988 602887819 831 True 1327.000000 1327 95.553000 6345 7170 1 chr4A.!!$R1 825
3 TraesCS4A01G008600 chr4A 5122675 5123322 647 False 673.000000 673 86.260000 8140 8759 1 chr4A.!!$F1 619
4 TraesCS4A01G008600 chr3A 686575002 686576839 1837 False 2880.000000 2880 94.868000 1459 3309 1 chr3A.!!$F4 1850
5 TraesCS4A01G008600 chr3A 99244620 99246480 1860 False 2593.000000 2593 91.782000 1459 3330 1 chr3A.!!$F1 1871
6 TraesCS4A01G008600 chr3A 382731742 382733628 1886 True 2545.000000 2545 90.933000 1459 3366 1 chr3A.!!$R2 1907
7 TraesCS4A01G008600 chr3A 735412508 735417389 4881 False 2389.333333 3035 96.549333 1667 7158 3 chr3A.!!$F6 5491
8 TraesCS4A01G008600 chr6A 51391596 51393497 1901 False 2615.000000 2615 91.501000 1459 3361 1 chr6A.!!$F1 1902
9 TraesCS4A01G008600 chr6A 616403370 616408617 5247 True 2368.666667 3005 95.734333 1647 7157 3 chr6A.!!$R2 5510
10 TraesCS4A01G008600 chr6A 100481612 100486884 5272 True 2046.333333 2979 94.781333 1635 8104 3 chr6A.!!$R1 6469
11 TraesCS4A01G008600 chr7A 671363922 671365777 1855 True 2761.000000 2761 93.502000 3927 5787 1 chr7A.!!$R2 1860
12 TraesCS4A01G008600 chr7A 697104406 697106262 1856 True 2728.000000 2728 93.179000 3928 5787 1 chr7A.!!$R3 1859
13 TraesCS4A01G008600 chr7A 734124498 734129972 5474 True 2095.500000 2863 96.593500 1672 7166 2 chr7A.!!$R4 5494
14 TraesCS4A01G008600 chr5A 708084377 708086236 1859 True 2804.000000 2804 93.881000 3927 5787 1 chr5A.!!$R2 1860
15 TraesCS4A01G008600 chr3B 812796065 812797961 1896 True 2771.000000 2771 92.977000 1459 3366 1 chr3B.!!$R1 1907
16 TraesCS4A01G008600 chr3B 711732457 711734292 1835 False 2676.000000 2676 92.911000 1459 3306 1 chr3B.!!$F7 1847
17 TraesCS4A01G008600 chr3B 44247019 44248874 1855 False 2553.000000 2553 91.465000 1459 3321 1 chr3B.!!$F2 1862
18 TraesCS4A01G008600 chr3B 549025986 549027838 1852 False 2516.000000 2516 91.039000 1459 3344 1 chr3B.!!$F4 1885
19 TraesCS4A01G008600 chr3B 564759138 564760151 1013 False 474.000000 549 90.211500 1000 8730 2 chr3B.!!$F9 7730
20 TraesCS4A01G008600 chr7B 682394647 682396483 1836 True 2713.000000 2713 93.319000 3948 5787 1 chr7B.!!$R3 1839
21 TraesCS4A01G008600 chr7B 126187907 126191772 3865 True 2657.000000 2708 92.361000 1459 5784 2 chr7B.!!$R6 4325
22 TraesCS4A01G008600 chr7B 725340916 725342772 1856 True 2588.000000 2588 91.760000 1459 3327 1 chr7B.!!$R4 1868
23 TraesCS4A01G008600 chr1B 46006962 46008853 1891 False 2708.000000 2708 92.470000 1459 3357 1 chr1B.!!$F1 1898
24 TraesCS4A01G008600 chr1B 642807634 642809112 1478 False 812.500000 1277 94.060500 6347 8103 2 chr1B.!!$F3 1756
25 TraesCS4A01G008600 chr1A 147696755 147698655 1900 True 2702.000000 2702 92.296000 1459 3365 1 chr1A.!!$R1 1906
26 TraesCS4A01G008600 chr5B 551771821 551773678 1857 True 2595.000000 2595 91.818000 1459 3328 1 chr5B.!!$R1 1869
27 TraesCS4A01G008600 chr5B 355238968 355240843 1875 False 2459.000000 2459 90.215000 1459 3366 1 chr5B.!!$F2 1907
28 TraesCS4A01G008600 chr5B 321025900 321030854 4954 True 1918.500000 2577 92.636000 1459 7170 2 chr5B.!!$R6 5711
29 TraesCS4A01G008600 chr5B 177846622 177851306 4684 False 1889.000000 2503 92.541000 1459 7166 2 chr5B.!!$F3 5707
30 TraesCS4A01G008600 chr5B 561707006 561712304 5298 False 1393.000000 2536 92.687000 1454 3357 2 chr5B.!!$F4 1903
31 TraesCS4A01G008600 chr5B 91185616 91186434 818 False 1271.000000 1271 94.660000 6345 7166 1 chr5B.!!$F1 821
32 TraesCS4A01G008600 chr2B 792292695 792294580 1885 True 2503.000000 2503 90.574000 1459 3357 1 chr2B.!!$R1 1898
33 TraesCS4A01G008600 chr2B 788457364 788462651 5287 True 1451.000000 2560 92.541500 1459 8104 2 chr2B.!!$R2 6645
34 TraesCS4A01G008600 chr4B 581950363 581951010 647 True 911.000000 911 91.880000 8432 9094 1 chr4B.!!$R1 662
35 TraesCS4A01G008600 chr4B 40526822 40528516 1694 True 797.500000 1251 93.948000 6354 8108 2 chr4B.!!$R3 1754
36 TraesCS4A01G008600 chr4B 582022604 582023683 1079 True 627.500000 628 89.019500 1007 8721 2 chr4B.!!$R5 7714
37 TraesCS4A01G008600 chr4B 581955463 581958030 2567 True 507.000000 837 90.734333 1 8324 3 chr4B.!!$R4 8323
38 TraesCS4A01G008600 chr4D 465350935 465352004 1069 True 585.500000 603 88.535500 1007 8759 2 chr4D.!!$R3 7752
39 TraesCS4A01G008600 chr4D 465155799 465162110 6311 True 488.833333 808 91.154333 886 9155 6 chr4D.!!$R1 8269
40 TraesCS4A01G008600 chr4D 465183421 465186990 3569 True 451.000000 767 91.145600 1 8721 5 chr4D.!!$R2 8720
41 TraesCS4A01G008600 chr3D 432513155 432514143 988 False 477.000000 556 90.852000 1002 8718 2 chr3D.!!$F2 7716

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
852 1534 0.384669 CCTAGGTGTAGGCGTGTAGC 59.615 60.0 0.00 0.0 39.68 3.58 F
2269 3844 1.096416 GATCCGGTCGAGTGAGAGTT 58.904 55.0 0.00 0.0 0.00 3.01 F
2476 4051 1.808411 GAACGACCTCAATGCCAAGA 58.192 50.0 0.00 0.0 0.00 3.02 F
4256 6666 0.108281 GGTGGGTAGCCGAGAAAGAC 60.108 60.0 6.45 0.0 0.00 3.01 F
5336 7747 0.608130 CGATTGGAGGTGTGGACAGA 59.392 55.0 0.00 0.0 0.00 3.41 F
5409 7820 0.615850 TGTCCATGTACCAATCGCCA 59.384 50.0 0.00 0.0 0.00 5.69 F
6831 9414 0.242825 CGGTGTGAAAGAGGTCGCTA 59.757 55.0 0.00 0.0 0.00 4.26 F
8332 16148 0.179092 GCTCTGTTAATACCCGGCGT 60.179 55.0 6.01 0.0 0.00 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2802 4377 0.549950 CCATGGCCATCTTGAGGAGT 59.450 55.000 17.61 0.00 0.00 3.85 R
3100 4675 1.272781 CGATGCAGGAAGAGTTCGAC 58.727 55.000 0.00 0.00 0.00 4.20 R
4315 6725 1.089481 CGCATCTTCGGCTGCCTTTA 61.089 55.000 17.92 0.00 33.99 1.85 R
5637 8048 0.987613 TCCATGCCTACTCCATGCCA 60.988 55.000 0.00 0.00 38.93 4.92 R
6718 9301 0.461548 CGCAAGGTCCTGCTCTATGA 59.538 55.000 10.39 0.00 40.33 2.15 R
6982 9565 1.535687 ACACCACCGCCTCCTACTT 60.536 57.895 0.00 0.00 0.00 2.24 R
8346 16162 0.237235 ACAACATGCAACGGCGTTAG 59.763 50.000 26.32 19.49 45.35 2.34 R
9371 21871 0.033781 GCTTGATGGGCTTTGTGCAA 59.966 50.000 0.00 0.00 45.15 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
140 141 9.489393 GTTCTTGAATTTCAAATTTTGTTCCAC 57.511 29.630 12.62 1.60 35.73 4.02
143 144 7.551035 TGAATTTCAAATTTTGTTCCACCAG 57.449 32.000 8.89 0.00 0.00 4.00
181 182 8.993852 ATTTGTTGATTCTAGAAATATTCGCG 57.006 30.769 9.71 0.00 34.02 5.87
199 200 3.314080 TCGCGGATTCAAGAAAAGTGTTT 59.686 39.130 6.13 0.00 0.00 2.83
455 481 2.686558 TTTCTTCTGTTGCATCGCAC 57.313 45.000 0.00 0.00 38.71 5.34
478 504 2.179427 GCCCTTTTGCCAATACTTCCT 58.821 47.619 0.00 0.00 0.00 3.36
479 505 2.166459 GCCCTTTTGCCAATACTTCCTC 59.834 50.000 0.00 0.00 0.00 3.71
480 506 2.760650 CCCTTTTGCCAATACTTCCTCC 59.239 50.000 0.00 0.00 0.00 4.30
482 508 4.026052 CCTTTTGCCAATACTTCCTCCAT 58.974 43.478 0.00 0.00 0.00 3.41
484 510 5.394553 CCTTTTGCCAATACTTCCTCCATTC 60.395 44.000 0.00 0.00 0.00 2.67
485 511 3.297134 TGCCAATACTTCCTCCATTCC 57.703 47.619 0.00 0.00 0.00 3.01
486 512 2.580322 TGCCAATACTTCCTCCATTCCA 59.420 45.455 0.00 0.00 0.00 3.53
488 514 4.023291 GCCAATACTTCCTCCATTCCAAA 58.977 43.478 0.00 0.00 0.00 3.28
489 515 4.651045 GCCAATACTTCCTCCATTCCAAAT 59.349 41.667 0.00 0.00 0.00 2.32
492 518 7.684428 GCCAATACTTCCTCCATTCCAAATTAC 60.684 40.741 0.00 0.00 0.00 1.89
493 519 7.561356 CCAATACTTCCTCCATTCCAAATTACT 59.439 37.037 0.00 0.00 0.00 2.24
494 520 8.624776 CAATACTTCCTCCATTCCAAATTACTC 58.375 37.037 0.00 0.00 0.00 2.59
495 521 6.139679 ACTTCCTCCATTCCAAATTACTCA 57.860 37.500 0.00 0.00 0.00 3.41
496 522 6.735556 ACTTCCTCCATTCCAAATTACTCAT 58.264 36.000 0.00 0.00 0.00 2.90
497 523 6.830838 ACTTCCTCCATTCCAAATTACTCATC 59.169 38.462 0.00 0.00 0.00 2.92
498 524 5.368145 TCCTCCATTCCAAATTACTCATCG 58.632 41.667 0.00 0.00 0.00 3.84
500 526 5.008019 CCTCCATTCCAAATTACTCATCGTG 59.992 44.000 0.00 0.00 0.00 4.35
502 528 4.640201 CCATTCCAAATTACTCATCGTGGT 59.360 41.667 0.00 0.00 0.00 4.16
504 530 6.350110 CCATTCCAAATTACTCATCGTGGTTT 60.350 38.462 0.00 0.00 0.00 3.27
505 531 6.642707 TTCCAAATTACTCATCGTGGTTTT 57.357 33.333 0.00 0.00 0.00 2.43
507 533 7.372451 TCCAAATTACTCATCGTGGTTTTAG 57.628 36.000 0.00 0.00 0.00 1.85
508 534 6.938030 TCCAAATTACTCATCGTGGTTTTAGT 59.062 34.615 0.00 0.00 0.00 2.24
509 535 7.446013 TCCAAATTACTCATCGTGGTTTTAGTT 59.554 33.333 0.00 0.00 0.00 2.24
510 536 7.749126 CCAAATTACTCATCGTGGTTTTAGTTC 59.251 37.037 0.00 0.00 0.00 3.01
511 537 7.972832 AATTACTCATCGTGGTTTTAGTTCA 57.027 32.000 0.00 0.00 0.00 3.18
512 538 7.972832 ATTACTCATCGTGGTTTTAGTTCAA 57.027 32.000 0.00 0.00 0.00 2.69
513 539 7.972832 TTACTCATCGTGGTTTTAGTTCAAT 57.027 32.000 0.00 0.00 0.00 2.57
514 540 6.241207 ACTCATCGTGGTTTTAGTTCAATG 57.759 37.500 0.00 0.00 0.00 2.82
515 541 5.995282 ACTCATCGTGGTTTTAGTTCAATGA 59.005 36.000 0.00 0.00 0.00 2.57
517 543 5.995282 TCATCGTGGTTTTAGTTCAATGAGT 59.005 36.000 0.00 0.00 0.00 3.41
518 544 7.156000 TCATCGTGGTTTTAGTTCAATGAGTA 58.844 34.615 0.00 0.00 0.00 2.59
519 545 7.658167 TCATCGTGGTTTTAGTTCAATGAGTAA 59.342 33.333 0.00 0.00 0.00 2.24
521 547 8.385898 TCGTGGTTTTAGTTCAATGAGTAATT 57.614 30.769 0.00 0.00 0.00 1.40
522 548 8.842280 TCGTGGTTTTAGTTCAATGAGTAATTT 58.158 29.630 0.00 0.00 0.00 1.82
523 549 8.901748 CGTGGTTTTAGTTCAATGAGTAATTTG 58.098 33.333 0.00 0.00 0.00 2.32
524 550 9.191995 GTGGTTTTAGTTCAATGAGTAATTTGG 57.808 33.333 0.00 0.00 0.00 3.28
525 551 9.137459 TGGTTTTAGTTCAATGAGTAATTTGGA 57.863 29.630 0.00 0.00 0.00 3.53
526 552 9.974980 GGTTTTAGTTCAATGAGTAATTTGGAA 57.025 29.630 0.00 0.00 0.00 3.53
531 557 8.059798 AGTTCAATGAGTAATTTGGAATGGAG 57.940 34.615 0.00 0.00 0.00 3.86
532 558 7.123247 AGTTCAATGAGTAATTTGGAATGGAGG 59.877 37.037 0.00 0.00 0.00 4.30
533 559 6.730447 TCAATGAGTAATTTGGAATGGAGGA 58.270 36.000 0.00 0.00 0.00 3.71
534 560 7.181361 TCAATGAGTAATTTGGAATGGAGGAA 58.819 34.615 0.00 0.00 0.00 3.36
535 561 7.340232 TCAATGAGTAATTTGGAATGGAGGAAG 59.660 37.037 0.00 0.00 0.00 3.46
536 562 6.139679 TGAGTAATTTGGAATGGAGGAAGT 57.860 37.500 0.00 0.00 0.00 3.01
538 564 7.110155 TGAGTAATTTGGAATGGAGGAAGTAC 58.890 38.462 0.00 0.00 0.00 2.73
539 565 7.037586 TGAGTAATTTGGAATGGAGGAAGTACT 60.038 37.037 0.00 0.00 34.87 2.73
541 567 7.829706 AGTAATTTGGAATGGAGGAAGTACTTC 59.170 37.037 24.73 24.73 38.80 3.01
581 607 8.806146 AGTTTGCATATAAGATTTGGTCAAAGT 58.194 29.630 2.55 0.00 33.32 2.66
582 608 9.076596 GTTTGCATATAAGATTTGGTCAAAGTC 57.923 33.333 2.55 1.51 33.32 3.01
585 611 8.801299 TGCATATAAGATTTGGTCAAAGTCAAA 58.199 29.630 2.55 0.00 37.29 2.69
586 612 9.076596 GCATATAAGATTTGGTCAAAGTCAAAC 57.923 33.333 2.55 0.00 35.97 2.93
687 1369 9.923143 AATTTCATGATGCATCTAACCATATTG 57.077 29.630 26.32 10.34 0.00 1.90
688 1370 8.694581 TTTCATGATGCATCTAACCATATTGA 57.305 30.769 26.32 12.12 0.00 2.57
689 1371 8.873186 TTCATGATGCATCTAACCATATTGAT 57.127 30.769 26.32 5.19 0.00 2.57
690 1372 8.873186 TCATGATGCATCTAACCATATTGATT 57.127 30.769 26.32 0.00 0.00 2.57
691 1373 9.304335 TCATGATGCATCTAACCATATTGATTT 57.696 29.630 26.32 0.00 0.00 2.17
692 1374 9.569167 CATGATGCATCTAACCATATTGATTTC 57.431 33.333 26.32 0.00 0.00 2.17
693 1375 8.694581 TGATGCATCTAACCATATTGATTTCA 57.305 30.769 26.32 0.00 0.00 2.69
694 1376 9.304335 TGATGCATCTAACCATATTGATTTCAT 57.696 29.630 26.32 0.00 0.00 2.57
764 1446 9.719355 AACAAAGTTTGACTTTAACCAAATCTT 57.281 25.926 22.23 0.00 45.84 2.40
772 1454 7.925993 TGACTTTAACCAAATCTTATATGCGG 58.074 34.615 0.00 0.00 0.00 5.69
773 1455 7.771361 TGACTTTAACCAAATCTTATATGCGGA 59.229 33.333 0.00 0.00 0.00 5.54
776 1458 9.268268 CTTTAACCAAATCTTATATGCGGACTA 57.732 33.333 0.00 0.00 0.00 2.59
777 1459 9.616156 TTTAACCAAATCTTATATGCGGACTAA 57.384 29.630 0.00 0.00 0.00 2.24
778 1460 9.616156 TTAACCAAATCTTATATGCGGACTAAA 57.384 29.630 0.00 0.00 0.00 1.85
779 1461 8.514330 AACCAAATCTTATATGCGGACTAAAA 57.486 30.769 0.00 0.00 0.00 1.52
780 1462 8.514330 ACCAAATCTTATATGCGGACTAAAAA 57.486 30.769 0.00 0.00 0.00 1.94
781 1463 8.621286 ACCAAATCTTATATGCGGACTAAAAAG 58.379 33.333 0.00 0.00 0.00 2.27
782 1464 8.836413 CCAAATCTTATATGCGGACTAAAAAGA 58.164 33.333 0.00 0.00 0.00 2.52
787 1469 7.760794 TCTTATATGCGGACTAAAAAGAAACGA 59.239 33.333 0.00 0.00 0.00 3.85
789 1471 4.461992 TGCGGACTAAAAAGAAACGAAG 57.538 40.909 0.00 0.00 0.00 3.79
790 1472 3.249080 TGCGGACTAAAAAGAAACGAAGG 59.751 43.478 0.00 0.00 0.00 3.46
809 1491 7.280356 ACGAAGGGAGTATTACATAAGCATTT 58.720 34.615 0.00 0.00 0.00 2.32
823 1505 3.893326 AGCATTTAAGCCCCAAATCAC 57.107 42.857 0.00 0.00 34.23 3.06
845 1527 3.428589 CGTAGTGTTTCCTAGGTGTAGGC 60.429 52.174 9.08 0.00 45.26 3.93
846 1528 1.549170 AGTGTTTCCTAGGTGTAGGCG 59.451 52.381 9.08 0.00 45.26 5.52
851 1533 2.048444 TCCTAGGTGTAGGCGTGTAG 57.952 55.000 9.08 0.00 45.26 2.74
852 1534 0.384669 CCTAGGTGTAGGCGTGTAGC 59.615 60.000 0.00 0.00 39.68 3.58
867 1549 5.591643 CGTGTAGCAAAGTCAATGTTAGT 57.408 39.130 0.00 0.00 0.00 2.24
868 1550 5.985781 CGTGTAGCAAAGTCAATGTTAGTT 58.014 37.500 0.00 0.00 0.00 2.24
869 1551 6.427150 CGTGTAGCAAAGTCAATGTTAGTTT 58.573 36.000 0.00 0.00 0.00 2.66
871 1553 7.431084 CGTGTAGCAAAGTCAATGTTAGTTTTT 59.569 33.333 0.00 0.00 0.00 1.94
1488 3056 3.368248 ACAAGATATGGGCTGTGCAATT 58.632 40.909 0.00 0.00 0.00 2.32
1539 3108 8.890718 GCACGTATATATAAGTACAGAGATGGA 58.109 37.037 10.46 0.00 0.00 3.41
1576 3145 1.850345 ACAAAGGAAACAGGAGGTGGA 59.150 47.619 0.00 0.00 0.00 4.02
1751 3322 1.296715 GTCGGCACATGGAGAACCT 59.703 57.895 0.00 0.00 37.04 3.50
1902 3473 1.225376 TGGGAAACGTCGTGATGCAC 61.225 55.000 0.00 0.00 0.00 4.57
1993 3567 2.384203 GCTGGAGCGCGAAACTATT 58.616 52.632 12.10 0.00 0.00 1.73
2102 3676 1.393603 CCAGTCAGCATCGGAGTAGA 58.606 55.000 0.00 0.00 0.00 2.59
2127 3701 3.283751 CCATCTCCAGAGAAGTAGACGT 58.716 50.000 0.66 0.00 41.36 4.34
2223 3798 3.918253 GAGGGGCGTGCATGTGGAA 62.918 63.158 7.93 0.00 0.00 3.53
2269 3844 1.096416 GATCCGGTCGAGTGAGAGTT 58.904 55.000 0.00 0.00 0.00 3.01
2336 3911 2.665000 CAGGCGAGCCCTCAAGAA 59.335 61.111 10.95 0.00 44.09 2.52
2476 4051 1.808411 GAACGACCTCAATGCCAAGA 58.192 50.000 0.00 0.00 0.00 3.02
2514 4089 4.044191 ACCCAGGTCCTTAATAGCAAACTT 59.956 41.667 0.00 0.00 0.00 2.66
2802 4377 2.640332 TGGGTTGCTCACAATACACCTA 59.360 45.455 0.00 0.00 38.27 3.08
4256 6666 0.108281 GGTGGGTAGCCGAGAAAGAC 60.108 60.000 6.45 0.00 0.00 3.01
4315 6725 2.857744 GCGGCGATGCTAGGGTAGT 61.858 63.158 12.98 0.00 0.00 2.73
4497 6907 4.220821 TGAAAGAGAAGAGTCCTAACGCAT 59.779 41.667 0.00 0.00 0.00 4.73
4560 6970 1.885157 CGAGGTGTACGGGCAAGTA 59.115 57.895 0.00 0.00 0.00 2.24
4626 7036 3.744530 CGAGGTTGTCAAACTCCTTCCTT 60.745 47.826 22.21 0.00 36.48 3.36
4737 7147 2.046314 CGCAACGGGAAGGTCCAT 60.046 61.111 0.00 0.00 38.64 3.41
4760 7170 9.247126 CCATACATAATGCGAAAAATCATCAAA 57.753 29.630 0.00 0.00 33.92 2.69
5183 7593 4.446385 CGGATTTTCACGTGTAAGAGAACA 59.554 41.667 16.51 0.00 0.00 3.18
5245 7656 9.355916 CGAGGATATTAGACATGGATATAGGAA 57.644 37.037 0.00 0.00 0.00 3.36
5256 7667 8.923838 ACATGGATATAGGAATGGAGTTAGAT 57.076 34.615 0.00 0.00 0.00 1.98
5299 7710 2.192263 GAGTGATGGGAAGGGAAGAGT 58.808 52.381 0.00 0.00 0.00 3.24
5336 7747 0.608130 CGATTGGAGGTGTGGACAGA 59.392 55.000 0.00 0.00 0.00 3.41
5409 7820 0.615850 TGTCCATGTACCAATCGCCA 59.384 50.000 0.00 0.00 0.00 5.69
5428 7839 2.920384 TGCCGGTGTAGCTGGACA 60.920 61.111 1.90 0.00 46.81 4.02
5691 8102 3.395702 TTCTGGCCGGCGTACCAT 61.396 61.111 22.54 0.00 34.82 3.55
6549 9131 1.075970 CTCCGGGATGAGGGTGAGA 60.076 63.158 0.00 0.00 0.00 3.27
6718 9301 1.821216 CTGGCACCCGTAAAACTCAT 58.179 50.000 0.00 0.00 0.00 2.90
6831 9414 0.242825 CGGTGTGAAAGAGGTCGCTA 59.757 55.000 0.00 0.00 0.00 4.26
6850 9433 4.211920 GCTAGAGATGGTGAGGTAGAACT 58.788 47.826 0.00 0.00 0.00 3.01
6947 9530 2.663196 GCCGTGCAGGAGGTACTT 59.337 61.111 8.24 0.00 41.55 2.24
6982 9565 3.187637 CGAAAAATACCGCTTCCAAGTGA 59.812 43.478 1.26 0.00 38.80 3.41
7931 10621 1.901591 CGGCTAGGGTTAGGATCGTA 58.098 55.000 0.00 0.00 0.00 3.43
7991 10681 5.277683 GCTGTGCAATCTCGATGTATTGATT 60.278 40.000 15.55 4.89 35.53 2.57
7993 10683 5.816777 TGTGCAATCTCGATGTATTGATTGA 59.183 36.000 20.70 8.16 44.83 2.57
8104 10795 7.903452 ATACACGTACACAATATACTCAACG 57.097 36.000 0.00 0.00 35.38 4.10
8105 10796 5.941733 ACACGTACACAATATACTCAACGA 58.058 37.500 0.00 0.00 33.59 3.85
8129 11813 5.045869 ACCAACATACACCAGCTTATGTACT 60.046 40.000 8.78 0.00 37.84 2.73
8130 11814 6.155565 ACCAACATACACCAGCTTATGTACTA 59.844 38.462 8.78 0.00 37.84 1.82
8131 11815 6.701841 CCAACATACACCAGCTTATGTACTAG 59.298 42.308 8.78 5.71 37.84 2.57
8134 11818 8.529424 ACATACACCAGCTTATGTACTAGTAA 57.471 34.615 3.61 0.00 37.19 2.24
8286 16020 1.676014 CCCGAGCAAAGTTCTACCAGG 60.676 57.143 0.00 0.00 0.00 4.45
8324 16140 4.530710 AACACCTGTCGCTCTGTTAATA 57.469 40.909 0.00 0.00 0.00 0.98
8325 16141 3.846360 ACACCTGTCGCTCTGTTAATAC 58.154 45.455 0.00 0.00 0.00 1.89
8328 16144 2.460918 CTGTCGCTCTGTTAATACCCG 58.539 52.381 0.00 0.00 0.00 5.28
8331 16147 1.213094 CGCTCTGTTAATACCCGGCG 61.213 60.000 0.00 0.00 35.75 6.46
8332 16148 0.179092 GCTCTGTTAATACCCGGCGT 60.179 55.000 6.01 0.00 0.00 5.68
8333 16149 1.741394 GCTCTGTTAATACCCGGCGTT 60.741 52.381 6.01 0.00 0.00 4.84
8336 16152 2.101249 TCTGTTAATACCCGGCGTTAGG 59.899 50.000 6.01 2.01 0.00 2.69
8338 16154 2.499289 TGTTAATACCCGGCGTTAGGAA 59.501 45.455 6.01 0.00 0.00 3.36
8339 16155 3.055530 TGTTAATACCCGGCGTTAGGAAA 60.056 43.478 6.01 0.00 0.00 3.13
8340 16156 4.129380 GTTAATACCCGGCGTTAGGAAAT 58.871 43.478 6.01 0.00 0.00 2.17
8341 16157 3.286329 AATACCCGGCGTTAGGAAATT 57.714 42.857 6.01 3.54 0.00 1.82
8342 16158 4.420522 AATACCCGGCGTTAGGAAATTA 57.579 40.909 6.01 0.00 0.00 1.40
8343 16159 2.785540 ACCCGGCGTTAGGAAATTAA 57.214 45.000 6.01 0.00 0.00 1.40
8344 16160 3.286329 ACCCGGCGTTAGGAAATTAAT 57.714 42.857 6.01 0.00 0.00 1.40
8345 16161 3.208594 ACCCGGCGTTAGGAAATTAATC 58.791 45.455 6.01 0.00 0.00 1.75
8346 16162 2.551032 CCCGGCGTTAGGAAATTAATCC 59.449 50.000 6.01 0.00 39.96 3.01
8356 16172 4.888038 GGAAATTAATCCTAACGCCGTT 57.112 40.909 7.93 7.93 36.50 4.44
8357 16173 4.594136 GGAAATTAATCCTAACGCCGTTG 58.406 43.478 13.65 2.62 36.50 4.10
8358 16174 3.685836 AATTAATCCTAACGCCGTTGC 57.314 42.857 13.65 0.00 0.00 4.17
8359 16175 2.096220 TTAATCCTAACGCCGTTGCA 57.904 45.000 13.65 0.00 37.32 4.08
8360 16176 2.319136 TAATCCTAACGCCGTTGCAT 57.681 45.000 13.65 0.00 37.32 3.96
8361 16177 0.732571 AATCCTAACGCCGTTGCATG 59.267 50.000 13.65 0.19 37.32 4.06
8362 16178 0.392461 ATCCTAACGCCGTTGCATGT 60.392 50.000 13.65 0.00 37.32 3.21
8363 16179 0.604243 TCCTAACGCCGTTGCATGTT 60.604 50.000 13.65 0.00 37.32 2.71
8364 16180 0.454285 CCTAACGCCGTTGCATGTTG 60.454 55.000 13.65 0.00 37.32 3.33
8365 16181 0.237235 CTAACGCCGTTGCATGTTGT 59.763 50.000 13.65 0.00 37.32 3.32
8366 16182 0.663688 TAACGCCGTTGCATGTTGTT 59.336 45.000 13.65 0.00 37.32 2.83
8367 16183 0.869454 AACGCCGTTGCATGTTGTTG 60.869 50.000 0.00 0.00 37.32 3.33
8368 16184 2.015627 CGCCGTTGCATGTTGTTGG 61.016 57.895 0.00 0.00 37.32 3.77
8369 16185 1.361993 GCCGTTGCATGTTGTTGGA 59.638 52.632 0.00 0.00 37.47 3.53
8370 16186 0.249238 GCCGTTGCATGTTGTTGGAA 60.249 50.000 0.00 0.00 37.47 3.53
8371 16187 1.605202 GCCGTTGCATGTTGTTGGAAT 60.605 47.619 0.00 0.00 37.47 3.01
8372 16188 2.327568 CCGTTGCATGTTGTTGGAATC 58.672 47.619 0.00 0.00 29.37 2.52
8373 16189 2.288091 CCGTTGCATGTTGTTGGAATCA 60.288 45.455 0.00 0.00 29.37 2.57
8374 16190 3.577667 CGTTGCATGTTGTTGGAATCAT 58.422 40.909 0.00 0.00 29.37 2.45
8375 16191 4.380339 CCGTTGCATGTTGTTGGAATCATA 60.380 41.667 0.00 0.00 29.37 2.15
8763 21249 1.326548 GTTGCTCGTTGCCGGTATTAG 59.673 52.381 1.90 0.00 42.00 1.73
8810 21299 1.287815 GTTGCCGGCCTTTGTTACC 59.712 57.895 26.77 0.00 0.00 2.85
8826 21315 6.674694 TTGTTACCGATCTCTCTACAGTAC 57.325 41.667 0.00 0.00 0.00 2.73
8966 21459 5.066375 TGTTTCACATTCATATAGTGCTGCC 59.934 40.000 0.00 0.00 33.44 4.85
8991 21484 7.545615 CCTGGAACTTTGTGGCTATTTTAATTC 59.454 37.037 0.00 0.00 0.00 2.17
8992 21485 7.957002 TGGAACTTTGTGGCTATTTTAATTCA 58.043 30.769 0.00 0.00 0.00 2.57
9033 21533 0.956633 AGCACCTACTCGTTGTCGAA 59.043 50.000 0.00 0.00 45.61 3.71
9045 21545 4.749976 TCGTTGTCGAACCATTATGATCA 58.250 39.130 0.00 0.00 43.34 2.92
9124 21624 9.694137 GTAAAACTGTGGACTCTCATATATACC 57.306 37.037 0.00 0.00 0.00 2.73
9126 21626 5.010933 ACTGTGGACTCTCATATATACCGG 58.989 45.833 0.00 0.00 0.00 5.28
9184 21684 8.517062 ACGTCTGTTACTATCTTTATAGTGGT 57.483 34.615 8.04 0.00 46.28 4.16
9185 21685 9.618890 ACGTCTGTTACTATCTTTATAGTGGTA 57.381 33.333 8.04 0.00 46.28 3.25
9221 21721 9.771534 AGTCTTCATTTATTTAGATGTAGGCTC 57.228 33.333 0.00 0.00 32.43 4.70
9222 21722 9.547753 GTCTTCATTTATTTAGATGTAGGCTCA 57.452 33.333 0.00 0.00 0.00 4.26
9228 21728 9.971922 ATTTATTTAGATGTAGGCTCATTTTGC 57.028 29.630 0.00 0.00 0.00 3.68
9241 21741 7.282332 GGCTCATTTTGCCTTCTATATTTCT 57.718 36.000 0.00 0.00 46.38 2.52
9242 21742 7.144000 GGCTCATTTTGCCTTCTATATTTCTG 58.856 38.462 0.00 0.00 46.38 3.02
9243 21743 7.201857 GGCTCATTTTGCCTTCTATATTTCTGT 60.202 37.037 0.00 0.00 46.38 3.41
9244 21744 8.193438 GCTCATTTTGCCTTCTATATTTCTGTT 58.807 33.333 0.00 0.00 0.00 3.16
9252 21752 9.256477 TGCCTTCTATATTTCTGTTATGTTACG 57.744 33.333 0.00 0.00 0.00 3.18
9253 21753 8.709646 GCCTTCTATATTTCTGTTATGTTACGG 58.290 37.037 0.00 0.00 0.00 4.02
9254 21754 9.760077 CCTTCTATATTTCTGTTATGTTACGGT 57.240 33.333 0.00 0.00 0.00 4.83
9287 21787 9.802039 TTATATTACCACAAACACCTCTTTTCT 57.198 29.630 0.00 0.00 0.00 2.52
9288 21788 8.706322 ATATTACCACAAACACCTCTTTTCTT 57.294 30.769 0.00 0.00 0.00 2.52
9289 21789 4.718940 ACCACAAACACCTCTTTTCTTG 57.281 40.909 0.00 0.00 0.00 3.02
9290 21790 4.340617 ACCACAAACACCTCTTTTCTTGA 58.659 39.130 0.00 0.00 0.00 3.02
9291 21791 4.956075 ACCACAAACACCTCTTTTCTTGAT 59.044 37.500 0.00 0.00 0.00 2.57
9292 21792 5.067805 ACCACAAACACCTCTTTTCTTGATC 59.932 40.000 0.00 0.00 0.00 2.92
9293 21793 5.507985 CCACAAACACCTCTTTTCTTGATCC 60.508 44.000 0.00 0.00 0.00 3.36
9294 21794 5.067674 CACAAACACCTCTTTTCTTGATCCA 59.932 40.000 0.00 0.00 0.00 3.41
9295 21795 5.067805 ACAAACACCTCTTTTCTTGATCCAC 59.932 40.000 0.00 0.00 0.00 4.02
9296 21796 4.713792 ACACCTCTTTTCTTGATCCACT 57.286 40.909 0.00 0.00 0.00 4.00
9297 21797 5.825593 ACACCTCTTTTCTTGATCCACTA 57.174 39.130 0.00 0.00 0.00 2.74
9298 21798 6.187727 ACACCTCTTTTCTTGATCCACTAA 57.812 37.500 0.00 0.00 0.00 2.24
9299 21799 6.234177 ACACCTCTTTTCTTGATCCACTAAG 58.766 40.000 0.00 0.00 0.00 2.18
9300 21800 6.183361 ACACCTCTTTTCTTGATCCACTAAGT 60.183 38.462 0.00 0.00 0.00 2.24
9301 21801 6.148480 CACCTCTTTTCTTGATCCACTAAGTG 59.852 42.308 0.00 0.00 0.00 3.16
9313 21813 3.521947 CACTAAGTGGGCTAGGTGTAC 57.478 52.381 0.00 0.00 0.00 2.90
9314 21814 3.097614 CACTAAGTGGGCTAGGTGTACT 58.902 50.000 0.00 0.00 0.00 2.73
9315 21815 3.097614 ACTAAGTGGGCTAGGTGTACTG 58.902 50.000 0.00 0.00 0.00 2.74
9316 21816 2.320681 AAGTGGGCTAGGTGTACTGA 57.679 50.000 0.00 0.00 0.00 3.41
9317 21817 1.853963 AGTGGGCTAGGTGTACTGAG 58.146 55.000 0.00 0.00 0.00 3.35
9318 21818 1.358103 AGTGGGCTAGGTGTACTGAGA 59.642 52.381 0.00 0.00 0.00 3.27
9319 21819 1.751924 GTGGGCTAGGTGTACTGAGAG 59.248 57.143 0.00 0.00 0.00 3.20
9320 21820 1.358103 TGGGCTAGGTGTACTGAGAGT 59.642 52.381 0.00 0.00 0.00 3.24
9321 21821 1.751924 GGGCTAGGTGTACTGAGAGTG 59.248 57.143 0.00 0.00 0.00 3.51
9322 21822 2.620886 GGGCTAGGTGTACTGAGAGTGA 60.621 54.545 0.00 0.00 0.00 3.41
9323 21823 3.292460 GGCTAGGTGTACTGAGAGTGAT 58.708 50.000 0.00 0.00 0.00 3.06
9324 21824 3.702045 GGCTAGGTGTACTGAGAGTGATT 59.298 47.826 0.00 0.00 0.00 2.57
9325 21825 4.888239 GGCTAGGTGTACTGAGAGTGATTA 59.112 45.833 0.00 0.00 0.00 1.75
9326 21826 5.536916 GGCTAGGTGTACTGAGAGTGATTAT 59.463 44.000 0.00 0.00 0.00 1.28
9327 21827 6.041069 GGCTAGGTGTACTGAGAGTGATTATT 59.959 42.308 0.00 0.00 0.00 1.40
9328 21828 7.142680 GCTAGGTGTACTGAGAGTGATTATTC 58.857 42.308 0.00 0.00 0.00 1.75
9329 21829 7.013846 GCTAGGTGTACTGAGAGTGATTATTCT 59.986 40.741 0.00 0.00 0.00 2.40
9330 21830 7.726033 AGGTGTACTGAGAGTGATTATTCTT 57.274 36.000 0.00 0.00 0.00 2.52
9331 21831 7.551585 AGGTGTACTGAGAGTGATTATTCTTG 58.448 38.462 0.00 0.00 0.00 3.02
9332 21832 7.179338 AGGTGTACTGAGAGTGATTATTCTTGT 59.821 37.037 0.00 0.00 0.00 3.16
9333 21833 8.467598 GGTGTACTGAGAGTGATTATTCTTGTA 58.532 37.037 0.00 0.00 0.00 2.41
9334 21834 9.509855 GTGTACTGAGAGTGATTATTCTTGTAG 57.490 37.037 0.00 0.00 0.00 2.74
9335 21835 9.462606 TGTACTGAGAGTGATTATTCTTGTAGA 57.537 33.333 0.00 0.00 0.00 2.59
9346 21846 9.554724 TGATTATTCTTGTAGAAAAATCAACGC 57.445 29.630 0.00 0.00 37.82 4.84
9347 21847 9.554724 GATTATTCTTGTAGAAAAATCAACGCA 57.445 29.630 0.00 0.00 37.82 5.24
9349 21849 9.906660 TTATTCTTGTAGAAAAATCAACGCATT 57.093 25.926 0.00 0.00 37.82 3.56
9350 21850 7.621832 TTCTTGTAGAAAAATCAACGCATTG 57.378 32.000 0.00 0.00 32.23 2.82
9351 21851 6.734137 TCTTGTAGAAAAATCAACGCATTGT 58.266 32.000 0.00 0.00 37.11 2.71
9352 21852 6.636447 TCTTGTAGAAAAATCAACGCATTGTG 59.364 34.615 0.00 0.00 37.11 3.33
9353 21853 5.218885 TGTAGAAAAATCAACGCATTGTGG 58.781 37.500 1.77 0.00 37.11 4.17
9354 21854 4.320608 AGAAAAATCAACGCATTGTGGT 57.679 36.364 1.77 0.00 37.11 4.16
9355 21855 4.692228 AGAAAAATCAACGCATTGTGGTT 58.308 34.783 1.77 0.00 37.11 3.67
9356 21856 5.837437 AGAAAAATCAACGCATTGTGGTTA 58.163 33.333 1.77 0.00 37.11 2.85
9357 21857 6.276847 AGAAAAATCAACGCATTGTGGTTAA 58.723 32.000 1.77 0.00 37.11 2.01
9358 21858 5.898630 AAAATCAACGCATTGTGGTTAAC 57.101 34.783 1.77 0.00 37.11 2.01
9359 21859 4.846779 AATCAACGCATTGTGGTTAACT 57.153 36.364 5.42 0.00 37.11 2.24
9360 21860 3.617540 TCAACGCATTGTGGTTAACTG 57.382 42.857 5.42 0.00 37.11 3.16
9361 21861 2.292016 TCAACGCATTGTGGTTAACTGG 59.708 45.455 5.42 0.00 37.11 4.00
9362 21862 1.243902 ACGCATTGTGGTTAACTGGG 58.756 50.000 5.42 6.45 0.00 4.45
9363 21863 0.109319 CGCATTGTGGTTAACTGGGC 60.109 55.000 5.42 1.07 0.00 5.36
9364 21864 0.246360 GCATTGTGGTTAACTGGGCC 59.754 55.000 5.42 0.00 0.00 5.80
9365 21865 1.923356 CATTGTGGTTAACTGGGCCT 58.077 50.000 4.53 0.00 0.00 5.19
9366 21866 1.545582 CATTGTGGTTAACTGGGCCTG 59.454 52.381 9.11 9.11 0.00 4.85
9367 21867 0.847373 TTGTGGTTAACTGGGCCTGA 59.153 50.000 18.12 0.00 0.00 3.86
9368 21868 0.847373 TGTGGTTAACTGGGCCTGAA 59.153 50.000 18.12 1.75 0.00 3.02
9369 21869 1.202879 TGTGGTTAACTGGGCCTGAAG 60.203 52.381 18.12 2.15 0.00 3.02
9370 21870 0.251165 TGGTTAACTGGGCCTGAAGC 60.251 55.000 18.12 11.61 42.60 3.86
9371 21871 0.038310 GGTTAACTGGGCCTGAAGCT 59.962 55.000 18.12 0.00 43.05 3.74
9372 21872 1.547901 GGTTAACTGGGCCTGAAGCTT 60.548 52.381 18.12 0.00 43.05 3.74
9373 21873 1.541588 GTTAACTGGGCCTGAAGCTTG 59.458 52.381 18.12 0.00 43.05 4.01
9374 21874 0.609131 TAACTGGGCCTGAAGCTTGC 60.609 55.000 18.12 0.03 43.05 4.01
9375 21875 2.282674 CTGGGCCTGAAGCTTGCA 60.283 61.111 2.10 0.64 43.05 4.08
9376 21876 2.598394 TGGGCCTGAAGCTTGCAC 60.598 61.111 2.10 2.43 43.05 4.57
9377 21877 2.598394 GGGCCTGAAGCTTGCACA 60.598 61.111 2.10 0.00 43.05 4.57
9378 21878 2.202395 GGGCCTGAAGCTTGCACAA 61.202 57.895 2.10 0.00 43.05 3.33
9379 21879 1.741525 GGCCTGAAGCTTGCACAAA 59.258 52.632 2.10 0.00 43.05 2.83
9380 21880 0.319297 GGCCTGAAGCTTGCACAAAG 60.319 55.000 2.10 0.00 43.05 2.77
9389 21889 2.074547 CTTGCACAAAGCCCATCAAG 57.925 50.000 0.00 0.00 44.83 3.02
9390 21890 0.033781 TTGCACAAAGCCCATCAAGC 59.966 50.000 0.00 0.00 44.83 4.01
9391 21891 1.114119 TGCACAAAGCCCATCAAGCA 61.114 50.000 0.00 0.00 44.83 3.91
9392 21892 0.033781 GCACAAAGCCCATCAAGCAA 59.966 50.000 0.00 0.00 37.23 3.91
9393 21893 1.938016 GCACAAAGCCCATCAAGCAAG 60.938 52.381 0.00 0.00 37.23 4.01
9394 21894 1.342174 CACAAAGCCCATCAAGCAAGT 59.658 47.619 0.00 0.00 0.00 3.16
9395 21895 2.557924 CACAAAGCCCATCAAGCAAGTA 59.442 45.455 0.00 0.00 0.00 2.24
9396 21896 2.558359 ACAAAGCCCATCAAGCAAGTAC 59.442 45.455 0.00 0.00 0.00 2.73
9397 21897 1.839424 AAGCCCATCAAGCAAGTACC 58.161 50.000 0.00 0.00 0.00 3.34
9398 21898 0.995024 AGCCCATCAAGCAAGTACCT 59.005 50.000 0.00 0.00 0.00 3.08
9399 21899 2.196595 AGCCCATCAAGCAAGTACCTA 58.803 47.619 0.00 0.00 0.00 3.08
9400 21900 2.171448 AGCCCATCAAGCAAGTACCTAG 59.829 50.000 0.00 0.00 0.00 3.02
9401 21901 2.746472 GCCCATCAAGCAAGTACCTAGG 60.746 54.545 7.41 7.41 0.00 3.02
9402 21902 2.565841 CCATCAAGCAAGTACCTAGGC 58.434 52.381 9.30 0.00 0.00 3.93
9403 21903 2.565841 CATCAAGCAAGTACCTAGGCC 58.434 52.381 9.30 0.00 0.00 5.19
9404 21904 0.909623 TCAAGCAAGTACCTAGGCCC 59.090 55.000 9.30 0.00 0.00 5.80
9405 21905 0.912486 CAAGCAAGTACCTAGGCCCT 59.088 55.000 9.30 1.17 0.00 5.19
9406 21906 1.282157 CAAGCAAGTACCTAGGCCCTT 59.718 52.381 9.30 8.24 0.00 3.95
9407 21907 0.912486 AGCAAGTACCTAGGCCCTTG 59.088 55.000 25.96 25.96 37.84 3.61
9408 21908 0.107165 GCAAGTACCTAGGCCCTTGG 60.107 60.000 28.79 9.90 35.86 3.61
9409 21909 1.580059 CAAGTACCTAGGCCCTTGGA 58.420 55.000 23.95 0.00 32.57 3.53
9410 21910 1.486726 CAAGTACCTAGGCCCTTGGAG 59.513 57.143 23.95 0.00 32.57 3.86
9411 21911 0.691413 AGTACCTAGGCCCTTGGAGC 60.691 60.000 18.63 9.56 31.18 4.70
9412 21912 0.691413 GTACCTAGGCCCTTGGAGCT 60.691 60.000 18.63 0.00 31.18 4.09
9413 21913 0.398664 TACCTAGGCCCTTGGAGCTC 60.399 60.000 18.63 4.71 31.18 4.09
9414 21914 2.447714 CCTAGGCCCTTGGAGCTCC 61.448 68.421 26.78 26.78 0.00 4.70
9415 21915 1.383803 CTAGGCCCTTGGAGCTCCT 60.384 63.158 32.28 13.72 36.82 3.69
9416 21916 0.105453 CTAGGCCCTTGGAGCTCCTA 60.105 60.000 32.28 24.46 36.82 2.94
9417 21917 0.398664 TAGGCCCTTGGAGCTCCTAC 60.399 60.000 32.28 16.59 36.82 3.18
9418 21918 1.995626 GGCCCTTGGAGCTCCTACA 60.996 63.158 32.28 15.89 36.82 2.74
9419 21919 1.222113 GCCCTTGGAGCTCCTACAC 59.778 63.158 32.28 14.87 36.82 2.90
9420 21920 1.553690 GCCCTTGGAGCTCCTACACA 61.554 60.000 32.28 10.16 36.82 3.72
9421 21921 0.250513 CCCTTGGAGCTCCTACACAC 59.749 60.000 32.28 5.61 36.82 3.82
9422 21922 0.976641 CCTTGGAGCTCCTACACACA 59.023 55.000 32.28 8.55 36.82 3.72
9423 21923 1.066573 CCTTGGAGCTCCTACACACAG 60.067 57.143 32.28 12.47 36.82 3.66
9424 21924 0.321671 TTGGAGCTCCTACACACAGC 59.678 55.000 32.28 3.29 36.82 4.40
9425 21925 1.153745 GGAGCTCCTACACACAGCG 60.154 63.158 26.25 0.00 38.26 5.18
9426 21926 1.587054 GAGCTCCTACACACAGCGT 59.413 57.895 0.87 0.00 38.26 5.07
9427 21927 0.456995 GAGCTCCTACACACAGCGTC 60.457 60.000 0.87 0.00 38.26 5.19
9428 21928 0.896019 AGCTCCTACACACAGCGTCT 60.896 55.000 0.00 0.00 38.26 4.18
9429 21929 0.038159 GCTCCTACACACAGCGTCTT 60.038 55.000 0.00 0.00 0.00 3.01
9430 21930 1.702886 CTCCTACACACAGCGTCTTG 58.297 55.000 0.00 0.00 0.00 3.02
9431 21931 0.319555 TCCTACACACAGCGTCTTGC 60.320 55.000 0.00 0.00 46.98 4.01
9441 21941 4.505217 CGTCTTGCGCACGATGCC 62.505 66.667 21.25 7.90 41.12 4.40
9442 21942 4.505217 GTCTTGCGCACGATGCCG 62.505 66.667 20.19 0.00 41.12 5.69
9450 21950 4.899239 CACGATGCCGGGAGCTCC 62.899 72.222 25.59 25.59 43.04 4.70
9452 21952 2.912542 CGATGCCGGGAGCTCCTA 60.913 66.667 31.36 16.03 44.23 2.94
9453 21953 2.925262 CGATGCCGGGAGCTCCTAG 61.925 68.421 31.36 23.91 44.23 3.02
9454 21954 1.834822 GATGCCGGGAGCTCCTAGT 60.835 63.158 31.36 13.71 44.23 2.57
9455 21955 1.383248 ATGCCGGGAGCTCCTAGTT 60.383 57.895 31.36 10.91 44.23 2.24
9456 21956 1.690219 ATGCCGGGAGCTCCTAGTTG 61.690 60.000 31.36 16.09 44.23 3.16
9457 21957 3.095347 GCCGGGAGCTCCTAGTTGG 62.095 68.421 31.36 23.56 38.99 3.77
9458 21958 2.501610 CGGGAGCTCCTAGTTGGC 59.498 66.667 31.36 12.50 35.95 4.52
9459 21959 2.501610 GGGAGCTCCTAGTTGGCG 59.498 66.667 31.36 0.00 35.95 5.69
9460 21960 2.202946 GGAGCTCCTAGTTGGCGC 60.203 66.667 26.25 0.00 46.39 6.53
9463 21963 2.269241 GCTCCTAGTTGGCGCCTT 59.731 61.111 29.70 15.70 40.51 4.35
9464 21964 1.815840 GCTCCTAGTTGGCGCCTTC 60.816 63.158 29.70 19.87 40.51 3.46
9465 21965 1.901085 CTCCTAGTTGGCGCCTTCT 59.099 57.895 29.70 25.48 35.26 2.85
9466 21966 0.460987 CTCCTAGTTGGCGCCTTCTG 60.461 60.000 29.70 17.51 35.26 3.02
9467 21967 2.109126 CCTAGTTGGCGCCTTCTGC 61.109 63.158 29.70 12.69 0.00 4.26
9476 21976 3.497031 GCCTTCTGCGCCGGTTAC 61.497 66.667 4.18 0.00 0.00 2.50
9477 21977 2.818274 CCTTCTGCGCCGGTTACC 60.818 66.667 4.18 0.00 0.00 2.85
9478 21978 2.264794 CTTCTGCGCCGGTTACCT 59.735 61.111 4.18 0.00 0.00 3.08
9479 21979 1.375523 CTTCTGCGCCGGTTACCTT 60.376 57.895 4.18 0.00 0.00 3.50
9480 21980 0.108520 CTTCTGCGCCGGTTACCTTA 60.109 55.000 4.18 0.00 0.00 2.69
9481 21981 0.321021 TTCTGCGCCGGTTACCTTAA 59.679 50.000 4.18 0.00 0.00 1.85
9482 21982 0.108520 TCTGCGCCGGTTACCTTAAG 60.109 55.000 4.18 0.00 0.00 1.85
9483 21983 0.390735 CTGCGCCGGTTACCTTAAGT 60.391 55.000 4.18 0.00 0.00 2.24
9484 21984 0.671163 TGCGCCGGTTACCTTAAGTG 60.671 55.000 4.18 0.00 0.00 3.16
9485 21985 1.363885 GCGCCGGTTACCTTAAGTGG 61.364 60.000 1.90 0.00 0.00 4.00
9486 21986 1.363885 CGCCGGTTACCTTAAGTGGC 61.364 60.000 1.90 5.79 36.38 5.01
9487 21987 1.363885 GCCGGTTACCTTAAGTGGCG 61.364 60.000 1.90 0.00 31.90 5.69
9488 21988 1.363885 CCGGTTACCTTAAGTGGCGC 61.364 60.000 0.00 0.00 0.00 6.53
9489 21989 1.363885 CGGTTACCTTAAGTGGCGCC 61.364 60.000 22.73 22.73 0.00 6.53
9490 21990 0.035725 GGTTACCTTAAGTGGCGCCT 60.036 55.000 29.70 10.43 0.00 5.52
9491 21991 1.084289 GTTACCTTAAGTGGCGCCTG 58.916 55.000 29.70 10.26 0.00 4.85
9492 21992 0.688487 TTACCTTAAGTGGCGCCTGT 59.312 50.000 29.70 15.06 0.00 4.00
9493 21993 1.559368 TACCTTAAGTGGCGCCTGTA 58.441 50.000 29.70 13.95 0.00 2.74
9494 21994 0.249398 ACCTTAAGTGGCGCCTGTAG 59.751 55.000 29.70 16.48 0.00 2.74
9495 21995 0.462047 CCTTAAGTGGCGCCTGTAGG 60.462 60.000 29.70 21.17 38.53 3.18
9496 21996 0.462047 CTTAAGTGGCGCCTGTAGGG 60.462 60.000 29.70 10.19 35.18 3.53
9505 22005 2.813908 CCTGTAGGGCGTCGTTGC 60.814 66.667 0.00 0.00 0.00 4.17
9506 22006 2.261671 CTGTAGGGCGTCGTTGCT 59.738 61.111 0.00 0.00 34.52 3.91
9507 22007 2.048597 TGTAGGGCGTCGTTGCTG 60.049 61.111 0.00 0.00 34.52 4.41
9508 22008 2.813908 GTAGGGCGTCGTTGCTGG 60.814 66.667 0.00 0.00 34.52 4.85
9509 22009 4.077184 TAGGGCGTCGTTGCTGGG 62.077 66.667 0.00 0.00 34.52 4.45
9514 22014 2.972505 CGTCGTTGCTGGGCTGTT 60.973 61.111 0.00 0.00 0.00 3.16
9515 22015 2.542907 CGTCGTTGCTGGGCTGTTT 61.543 57.895 0.00 0.00 0.00 2.83
9516 22016 1.282875 GTCGTTGCTGGGCTGTTTC 59.717 57.895 0.00 0.00 0.00 2.78
9517 22017 1.148273 TCGTTGCTGGGCTGTTTCT 59.852 52.632 0.00 0.00 0.00 2.52
9518 22018 0.465460 TCGTTGCTGGGCTGTTTCTT 60.465 50.000 0.00 0.00 0.00 2.52
9519 22019 0.040067 CGTTGCTGGGCTGTTTCTTC 60.040 55.000 0.00 0.00 0.00 2.87
9520 22020 1.032014 GTTGCTGGGCTGTTTCTTCA 58.968 50.000 0.00 0.00 0.00 3.02
9521 22021 1.032014 TTGCTGGGCTGTTTCTTCAC 58.968 50.000 0.00 0.00 0.00 3.18
9522 22022 0.183492 TGCTGGGCTGTTTCTTCACT 59.817 50.000 0.00 0.00 0.00 3.41
9523 22023 0.595095 GCTGGGCTGTTTCTTCACTG 59.405 55.000 0.00 0.00 0.00 3.66
9524 22024 1.242076 CTGGGCTGTTTCTTCACTGG 58.758 55.000 0.00 0.00 0.00 4.00
9525 22025 0.823356 TGGGCTGTTTCTTCACTGGC 60.823 55.000 0.00 0.00 39.57 4.85
9526 22026 1.959848 GGCTGTTTCTTCACTGGCC 59.040 57.895 0.00 0.00 35.78 5.36
9527 22027 1.527433 GGCTGTTTCTTCACTGGCCC 61.527 60.000 0.00 0.00 35.78 5.80
9528 22028 0.823356 GCTGTTTCTTCACTGGCCCA 60.823 55.000 0.00 0.00 0.00 5.36
9529 22029 1.691196 CTGTTTCTTCACTGGCCCAA 58.309 50.000 0.00 0.00 0.00 4.12
9530 22030 1.610522 CTGTTTCTTCACTGGCCCAAG 59.389 52.381 0.00 0.00 0.00 3.61
9531 22031 1.064017 TGTTTCTTCACTGGCCCAAGT 60.064 47.619 0.00 0.00 0.00 3.16
9532 22032 2.173782 TGTTTCTTCACTGGCCCAAGTA 59.826 45.455 0.00 0.00 0.00 2.24
9533 22033 2.814336 GTTTCTTCACTGGCCCAAGTAG 59.186 50.000 0.00 0.00 0.00 2.57
9534 22034 1.729586 TCTTCACTGGCCCAAGTAGT 58.270 50.000 0.00 0.00 0.00 2.73
9535 22035 2.054799 TCTTCACTGGCCCAAGTAGTT 58.945 47.619 0.00 0.00 0.00 2.24
9536 22036 2.154462 CTTCACTGGCCCAAGTAGTTG 58.846 52.381 0.00 3.09 0.00 3.16
9537 22037 0.250727 TCACTGGCCCAAGTAGTTGC 60.251 55.000 0.00 0.00 31.64 4.17
9538 22038 1.302511 ACTGGCCCAAGTAGTTGCG 60.303 57.895 0.00 0.00 31.64 4.85
9539 22039 2.671619 TGGCCCAAGTAGTTGCGC 60.672 61.111 10.86 10.86 36.83 6.09
9540 22040 3.799755 GGCCCAAGTAGTTGCGCG 61.800 66.667 12.58 0.00 38.20 6.86
9541 22041 4.460873 GCCCAAGTAGTTGCGCGC 62.461 66.667 27.26 27.26 28.13 6.86
9542 22042 2.742372 CCCAAGTAGTTGCGCGCT 60.742 61.111 33.29 15.25 31.64 5.92
9543 22043 2.325082 CCCAAGTAGTTGCGCGCTT 61.325 57.895 33.29 19.59 31.64 4.68
9544 22044 1.017177 CCCAAGTAGTTGCGCGCTTA 61.017 55.000 33.29 17.69 31.64 3.09
9545 22045 1.006832 CCAAGTAGTTGCGCGCTTAT 58.993 50.000 33.29 19.32 31.64 1.73
9546 22046 2.198406 CCAAGTAGTTGCGCGCTTATA 58.802 47.619 33.29 18.24 31.64 0.98
9547 22047 2.034001 CCAAGTAGTTGCGCGCTTATAC 60.034 50.000 33.29 27.26 31.64 1.47
9548 22048 2.858344 CAAGTAGTTGCGCGCTTATACT 59.142 45.455 33.29 28.82 0.00 2.12
9549 22049 2.460918 AGTAGTTGCGCGCTTATACTG 58.539 47.619 33.29 0.00 0.00 2.74
9550 22050 2.159282 AGTAGTTGCGCGCTTATACTGT 60.159 45.455 33.29 16.84 0.00 3.55
9551 22051 1.722011 AGTTGCGCGCTTATACTGTT 58.278 45.000 33.29 6.64 0.00 3.16
9552 22052 2.073816 AGTTGCGCGCTTATACTGTTT 58.926 42.857 33.29 6.30 0.00 2.83
9553 22053 2.093783 AGTTGCGCGCTTATACTGTTTC 59.906 45.455 33.29 5.73 0.00 2.78
9554 22054 2.004583 TGCGCGCTTATACTGTTTCT 57.995 45.000 33.29 0.00 0.00 2.52
9555 22055 2.343101 TGCGCGCTTATACTGTTTCTT 58.657 42.857 33.29 0.00 0.00 2.52
9556 22056 2.347452 TGCGCGCTTATACTGTTTCTTC 59.653 45.455 33.29 0.00 0.00 2.87
9557 22057 2.594498 GCGCGCTTATACTGTTTCTTCG 60.594 50.000 26.67 0.00 0.00 3.79
9558 22058 2.597305 CGCGCTTATACTGTTTCTTCGT 59.403 45.455 5.56 0.00 0.00 3.85
9559 22059 3.060363 CGCGCTTATACTGTTTCTTCGTT 59.940 43.478 5.56 0.00 0.00 3.85
9560 22060 4.566177 GCGCTTATACTGTTTCTTCGTTC 58.434 43.478 0.00 0.00 0.00 3.95
9561 22061 4.326548 GCGCTTATACTGTTTCTTCGTTCT 59.673 41.667 0.00 0.00 0.00 3.01
9562 22062 5.721510 GCGCTTATACTGTTTCTTCGTTCTG 60.722 44.000 0.00 0.00 0.00 3.02
9563 22063 5.551893 GCTTATACTGTTTCTTCGTTCTGC 58.448 41.667 0.00 0.00 0.00 4.26
9564 22064 5.348997 GCTTATACTGTTTCTTCGTTCTGCT 59.651 40.000 0.00 0.00 0.00 4.24
9565 22065 6.530534 GCTTATACTGTTTCTTCGTTCTGCTA 59.469 38.462 0.00 0.00 0.00 3.49
9566 22066 7.222999 GCTTATACTGTTTCTTCGTTCTGCTAT 59.777 37.037 0.00 0.00 0.00 2.97
9567 22067 8.997621 TTATACTGTTTCTTCGTTCTGCTATT 57.002 30.769 0.00 0.00 0.00 1.73
9568 22068 7.907214 ATACTGTTTCTTCGTTCTGCTATTT 57.093 32.000 0.00 0.00 0.00 1.40
9569 22069 5.990408 ACTGTTTCTTCGTTCTGCTATTTG 58.010 37.500 0.00 0.00 0.00 2.32
9570 22070 5.527582 ACTGTTTCTTCGTTCTGCTATTTGT 59.472 36.000 0.00 0.00 0.00 2.83
9571 22071 6.038271 ACTGTTTCTTCGTTCTGCTATTTGTT 59.962 34.615 0.00 0.00 0.00 2.83
9572 22072 6.427150 TGTTTCTTCGTTCTGCTATTTGTTC 58.573 36.000 0.00 0.00 0.00 3.18
9573 22073 4.903638 TCTTCGTTCTGCTATTTGTTCG 57.096 40.909 0.00 0.00 0.00 3.95
9574 22074 4.304110 TCTTCGTTCTGCTATTTGTTCGT 58.696 39.130 0.00 0.00 0.00 3.85
9575 22075 4.748102 TCTTCGTTCTGCTATTTGTTCGTT 59.252 37.500 0.00 0.00 0.00 3.85
9576 22076 4.640805 TCGTTCTGCTATTTGTTCGTTC 57.359 40.909 0.00 0.00 0.00 3.95
9577 22077 4.304110 TCGTTCTGCTATTTGTTCGTTCT 58.696 39.130 0.00 0.00 0.00 3.01
9578 22078 5.463286 TCGTTCTGCTATTTGTTCGTTCTA 58.537 37.500 0.00 0.00 0.00 2.10
9579 22079 6.097356 TCGTTCTGCTATTTGTTCGTTCTAT 58.903 36.000 0.00 0.00 0.00 1.98
9580 22080 6.588756 TCGTTCTGCTATTTGTTCGTTCTATT 59.411 34.615 0.00 0.00 0.00 1.73
9581 22081 6.678663 CGTTCTGCTATTTGTTCGTTCTATTG 59.321 38.462 0.00 0.00 0.00 1.90
9582 22082 7.519002 GTTCTGCTATTTGTTCGTTCTATTGT 58.481 34.615 0.00 0.00 0.00 2.71
9583 22083 7.667043 TCTGCTATTTGTTCGTTCTATTGTT 57.333 32.000 0.00 0.00 0.00 2.83
9584 22084 8.094798 TCTGCTATTTGTTCGTTCTATTGTTT 57.905 30.769 0.00 0.00 0.00 2.83
9585 22085 8.227791 TCTGCTATTTGTTCGTTCTATTGTTTC 58.772 33.333 0.00 0.00 0.00 2.78
9586 22086 8.094798 TGCTATTTGTTCGTTCTATTGTTTCT 57.905 30.769 0.00 0.00 0.00 2.52
9587 22087 8.564574 TGCTATTTGTTCGTTCTATTGTTTCTT 58.435 29.630 0.00 0.00 0.00 2.52
9588 22088 9.052080 GCTATTTGTTCGTTCTATTGTTTCTTC 57.948 33.333 0.00 0.00 0.00 2.87
9592 22092 7.647907 TGTTCGTTCTATTGTTTCTTCTACC 57.352 36.000 0.00 0.00 0.00 3.18
9593 22093 7.439381 TGTTCGTTCTATTGTTTCTTCTACCT 58.561 34.615 0.00 0.00 0.00 3.08
9594 22094 7.929785 TGTTCGTTCTATTGTTTCTTCTACCTT 59.070 33.333 0.00 0.00 0.00 3.50
9595 22095 8.771766 GTTCGTTCTATTGTTTCTTCTACCTTT 58.228 33.333 0.00 0.00 0.00 3.11
9596 22096 8.530269 TCGTTCTATTGTTTCTTCTACCTTTC 57.470 34.615 0.00 0.00 0.00 2.62
9597 22097 7.327761 TCGTTCTATTGTTTCTTCTACCTTTCG 59.672 37.037 0.00 0.00 0.00 3.46
9598 22098 7.327761 CGTTCTATTGTTTCTTCTACCTTTCGA 59.672 37.037 0.00 0.00 0.00 3.71
9599 22099 8.433893 GTTCTATTGTTTCTTCTACCTTTCGAC 58.566 37.037 0.00 0.00 0.00 4.20
9600 22100 7.663827 TCTATTGTTTCTTCTACCTTTCGACA 58.336 34.615 0.00 0.00 0.00 4.35
9601 22101 8.145767 TCTATTGTTTCTTCTACCTTTCGACAA 58.854 33.333 0.00 0.00 0.00 3.18
9602 22102 7.745620 ATTGTTTCTTCTACCTTTCGACAAT 57.254 32.000 0.00 0.00 32.24 2.71
9603 22103 8.842358 ATTGTTTCTTCTACCTTTCGACAATA 57.158 30.769 0.00 0.00 34.52 1.90
9604 22104 7.647907 TGTTTCTTCTACCTTTCGACAATAC 57.352 36.000 0.00 0.00 0.00 1.89
9605 22105 7.211573 TGTTTCTTCTACCTTTCGACAATACA 58.788 34.615 0.00 0.00 0.00 2.29
9606 22106 7.711772 TGTTTCTTCTACCTTTCGACAATACAA 59.288 33.333 0.00 0.00 0.00 2.41
9607 22107 8.718734 GTTTCTTCTACCTTTCGACAATACAAT 58.281 33.333 0.00 0.00 0.00 2.71
9608 22108 8.842358 TTCTTCTACCTTTCGACAATACAATT 57.158 30.769 0.00 0.00 0.00 2.32
9609 22109 8.475331 TCTTCTACCTTTCGACAATACAATTC 57.525 34.615 0.00 0.00 0.00 2.17
9610 22110 6.880822 TCTACCTTTCGACAATACAATTCG 57.119 37.500 0.00 0.00 0.00 3.34
9611 22111 6.623486 TCTACCTTTCGACAATACAATTCGA 58.377 36.000 0.00 0.00 39.91 3.71
9612 22112 7.092079 TCTACCTTTCGACAATACAATTCGAA 58.908 34.615 0.00 0.00 46.93 3.71
9616 22116 4.577687 TCGACAATACAATTCGAACTGC 57.422 40.909 6.50 0.00 38.77 4.40
9617 22117 3.991121 TCGACAATACAATTCGAACTGCA 59.009 39.130 6.50 0.00 38.77 4.41
9618 22118 4.449405 TCGACAATACAATTCGAACTGCAA 59.551 37.500 6.50 0.00 38.77 4.08
9619 22119 5.050023 TCGACAATACAATTCGAACTGCAAA 60.050 36.000 6.50 0.00 38.77 3.68
9620 22120 5.794945 CGACAATACAATTCGAACTGCAAAT 59.205 36.000 6.50 0.00 34.62 2.32
9621 22121 6.305399 CGACAATACAATTCGAACTGCAAATT 59.695 34.615 6.50 1.90 34.62 1.82
9622 22122 7.148983 CGACAATACAATTCGAACTGCAAATTT 60.149 33.333 6.50 0.00 34.62 1.82
9623 22123 8.006741 ACAATACAATTCGAACTGCAAATTTC 57.993 30.769 6.50 0.00 0.00 2.17
9624 22124 7.867403 ACAATACAATTCGAACTGCAAATTTCT 59.133 29.630 6.50 0.00 0.00 2.52
9625 22125 8.702438 CAATACAATTCGAACTGCAAATTTCTT 58.298 29.630 6.50 0.00 0.00 2.52
9626 22126 8.816640 ATACAATTCGAACTGCAAATTTCTTT 57.183 26.923 6.50 0.00 0.00 2.52
9627 22127 7.165427 ACAATTCGAACTGCAAATTTCTTTC 57.835 32.000 6.50 0.00 0.00 2.62
9628 22128 6.980397 ACAATTCGAACTGCAAATTTCTTTCT 59.020 30.769 6.50 0.00 0.00 2.52
9629 22129 6.998258 ATTCGAACTGCAAATTTCTTTCTG 57.002 33.333 0.00 0.00 0.00 3.02
9630 22130 5.749596 TCGAACTGCAAATTTCTTTCTGA 57.250 34.783 0.00 0.00 0.00 3.27
9631 22131 6.130298 TCGAACTGCAAATTTCTTTCTGAA 57.870 33.333 0.00 0.00 0.00 3.02
9632 22132 6.738114 TCGAACTGCAAATTTCTTTCTGAAT 58.262 32.000 0.00 0.00 34.24 2.57
9633 22133 7.870826 TCGAACTGCAAATTTCTTTCTGAATA 58.129 30.769 0.00 0.00 34.24 1.75
9634 22134 7.803189 TCGAACTGCAAATTTCTTTCTGAATAC 59.197 33.333 0.00 0.00 34.24 1.89
9635 22135 7.591057 CGAACTGCAAATTTCTTTCTGAATACA 59.409 33.333 0.00 0.00 34.24 2.29
9636 22136 9.415544 GAACTGCAAATTTCTTTCTGAATACAT 57.584 29.630 0.00 0.00 34.24 2.29
9689 22189 7.411486 TGGAACAAACTTTCTTAACAATGGA 57.589 32.000 0.00 0.00 31.92 3.41
9690 22190 7.841956 TGGAACAAACTTTCTTAACAATGGAA 58.158 30.769 0.00 0.00 31.92 3.53
9691 22191 8.314751 TGGAACAAACTTTCTTAACAATGGAAA 58.685 29.630 0.00 0.00 31.92 3.13
9692 22192 9.157104 GGAACAAACTTTCTTAACAATGGAAAA 57.843 29.630 0.00 0.00 0.00 2.29
9698 22198 9.764363 AACTTTCTTAACAATGGAAAAATCTCC 57.236 29.630 0.00 0.00 35.88 3.71
9710 22210 6.778821 TGGAAAAATCTCCATAAGTCACAGA 58.221 36.000 0.00 0.00 40.71 3.41
9711 22211 7.230747 TGGAAAAATCTCCATAAGTCACAGAA 58.769 34.615 0.00 0.00 40.71 3.02
9712 22212 7.723616 TGGAAAAATCTCCATAAGTCACAGAAA 59.276 33.333 0.00 0.00 40.71 2.52
9713 22213 8.023706 GGAAAAATCTCCATAAGTCACAGAAAC 58.976 37.037 0.00 0.00 35.36 2.78
9714 22214 7.454260 AAAATCTCCATAAGTCACAGAAACC 57.546 36.000 0.00 0.00 0.00 3.27
9715 22215 6.380079 AATCTCCATAAGTCACAGAAACCT 57.620 37.500 0.00 0.00 0.00 3.50
9716 22216 5.152623 TCTCCATAAGTCACAGAAACCTG 57.847 43.478 0.00 0.00 37.67 4.00
9717 22217 3.674997 TCCATAAGTCACAGAAACCTGC 58.325 45.455 0.00 0.00 35.09 4.85
9718 22218 3.327757 TCCATAAGTCACAGAAACCTGCT 59.672 43.478 0.00 0.00 35.09 4.24
9719 22219 3.438087 CCATAAGTCACAGAAACCTGCTG 59.562 47.826 0.00 0.00 39.26 4.41
9720 22220 4.318332 CATAAGTCACAGAAACCTGCTGA 58.682 43.478 0.00 0.00 36.86 4.26
9721 22221 3.498774 AAGTCACAGAAACCTGCTGAT 57.501 42.857 0.00 0.00 36.86 2.90
9722 22222 3.498774 AGTCACAGAAACCTGCTGATT 57.501 42.857 0.00 0.00 36.86 2.57
9723 22223 3.144506 AGTCACAGAAACCTGCTGATTG 58.855 45.455 0.00 0.00 36.86 2.67
9724 22224 3.141398 GTCACAGAAACCTGCTGATTGA 58.859 45.455 0.00 0.00 36.86 2.57
9725 22225 3.565482 GTCACAGAAACCTGCTGATTGAA 59.435 43.478 0.00 0.00 36.86 2.69
9726 22226 4.036734 GTCACAGAAACCTGCTGATTGAAA 59.963 41.667 0.00 0.00 36.86 2.69
9727 22227 4.828939 TCACAGAAACCTGCTGATTGAAAT 59.171 37.500 0.00 0.00 36.86 2.17
9728 22228 5.048504 TCACAGAAACCTGCTGATTGAAATC 60.049 40.000 0.00 0.00 36.86 2.17
9729 22229 5.048224 CACAGAAACCTGCTGATTGAAATCT 60.048 40.000 4.76 0.00 36.86 2.40
9730 22230 5.537674 ACAGAAACCTGCTGATTGAAATCTT 59.462 36.000 4.76 0.00 36.86 2.40
9731 22231 6.041296 ACAGAAACCTGCTGATTGAAATCTTT 59.959 34.615 4.76 0.00 36.86 2.52
9732 22232 7.231317 ACAGAAACCTGCTGATTGAAATCTTTA 59.769 33.333 4.76 0.00 36.86 1.85
9733 22233 8.084073 CAGAAACCTGCTGATTGAAATCTTTAA 58.916 33.333 4.76 0.00 36.39 1.52
9734 22234 8.302438 AGAAACCTGCTGATTGAAATCTTTAAG 58.698 33.333 4.76 0.00 36.39 1.85
9735 22235 7.765695 AACCTGCTGATTGAAATCTTTAAGA 57.234 32.000 0.00 0.00 36.39 2.10
9736 22236 7.765695 ACCTGCTGATTGAAATCTTTAAGAA 57.234 32.000 0.00 0.00 36.39 2.52
9737 22237 8.358582 ACCTGCTGATTGAAATCTTTAAGAAT 57.641 30.769 0.00 0.00 36.39 2.40
9738 22238 8.810041 ACCTGCTGATTGAAATCTTTAAGAATT 58.190 29.630 0.00 0.00 36.39 2.17
9739 22239 9.649167 CCTGCTGATTGAAATCTTTAAGAATTT 57.351 29.630 0.00 0.91 36.39 1.82
9741 22241 9.426837 TGCTGATTGAAATCTTTAAGAATTTGG 57.573 29.630 0.00 0.00 36.39 3.28
9742 22242 9.643693 GCTGATTGAAATCTTTAAGAATTTGGA 57.356 29.630 0.00 0.00 36.39 3.53
9748 22248 8.253113 TGAAATCTTTAAGAATTTGGATCTGGC 58.747 33.333 0.00 0.00 0.00 4.85
9749 22249 7.968014 AATCTTTAAGAATTTGGATCTGGCT 57.032 32.000 0.00 0.00 0.00 4.75
9750 22250 7.968014 ATCTTTAAGAATTTGGATCTGGCTT 57.032 32.000 0.00 0.00 0.00 4.35
9751 22251 7.396540 TCTTTAAGAATTTGGATCTGGCTTC 57.603 36.000 0.00 0.00 0.00 3.86
9752 22252 6.378280 TCTTTAAGAATTTGGATCTGGCTTCC 59.622 38.462 0.00 0.00 0.00 3.46
9753 22253 3.744940 AGAATTTGGATCTGGCTTCCA 57.255 42.857 0.00 1.07 41.50 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 119 7.609532 ACTGGTGGAACAAAATTTGAAATTCAA 59.390 29.630 13.19 4.03 44.16 2.69
156 157 8.070171 CCGCGAATATTTCTAGAATCAACAAAT 58.930 33.333 8.23 0.00 0.00 2.32
175 176 3.502211 ACACTTTTCTTGAATCCGCGAAT 59.498 39.130 8.23 0.00 0.00 3.34
240 243 9.299963 CAAGAACACTTGTGAATTCAATAACAA 57.700 29.630 10.35 9.17 37.02 2.83
242 245 9.683069 ATCAAGAACACTTGTGAATTCAATAAC 57.317 29.630 10.35 0.00 40.99 1.89
255 258 6.757947 ACATTTTCCACAATCAAGAACACTTG 59.242 34.615 0.00 0.00 41.38 3.16
258 262 6.074888 CGAACATTTTCCACAATCAAGAACAC 60.075 38.462 0.00 0.00 0.00 3.32
270 274 9.974750 TTTTACAAATTTTCGAACATTTTCCAC 57.025 25.926 17.40 0.00 0.00 4.02
315 320 8.910666 CGTGCACATATTTGAAATAGTGAAAAA 58.089 29.630 18.64 8.59 0.00 1.94
316 321 8.293157 TCGTGCACATATTTGAAATAGTGAAAA 58.707 29.630 18.64 10.11 0.00 2.29
379 402 1.202452 TGCTGCATCACCGAGATACTG 60.202 52.381 0.00 0.00 34.43 2.74
468 494 8.525290 AGTAATTTGGAATGGAGGAAGTATTG 57.475 34.615 0.00 0.00 0.00 1.90
469 495 8.336235 TGAGTAATTTGGAATGGAGGAAGTATT 58.664 33.333 0.00 0.00 0.00 1.89
473 499 6.017605 CGATGAGTAATTTGGAATGGAGGAAG 60.018 42.308 0.00 0.00 0.00 3.46
475 501 5.104527 ACGATGAGTAATTTGGAATGGAGGA 60.105 40.000 0.00 0.00 0.00 3.71
476 502 5.008019 CACGATGAGTAATTTGGAATGGAGG 59.992 44.000 0.00 0.00 0.00 4.30
478 504 4.881273 CCACGATGAGTAATTTGGAATGGA 59.119 41.667 0.00 0.00 0.00 3.41
479 505 4.640201 ACCACGATGAGTAATTTGGAATGG 59.360 41.667 0.00 0.00 0.00 3.16
480 506 5.818136 ACCACGATGAGTAATTTGGAATG 57.182 39.130 0.00 0.00 0.00 2.67
482 508 6.642707 AAAACCACGATGAGTAATTTGGAA 57.357 33.333 0.00 0.00 0.00 3.53
484 510 7.141100 ACTAAAACCACGATGAGTAATTTGG 57.859 36.000 0.00 0.00 0.00 3.28
485 511 8.286800 TGAACTAAAACCACGATGAGTAATTTG 58.713 33.333 0.00 0.00 0.00 2.32
486 512 8.385898 TGAACTAAAACCACGATGAGTAATTT 57.614 30.769 0.00 0.00 0.00 1.82
488 514 7.972832 TTGAACTAAAACCACGATGAGTAAT 57.027 32.000 0.00 0.00 0.00 1.89
489 515 7.658167 TCATTGAACTAAAACCACGATGAGTAA 59.342 33.333 0.00 0.00 30.84 2.24
492 518 6.147821 ACTCATTGAACTAAAACCACGATGAG 59.852 38.462 16.30 16.30 46.40 2.90
493 519 5.995282 ACTCATTGAACTAAAACCACGATGA 59.005 36.000 0.00 0.00 32.65 2.92
494 520 6.241207 ACTCATTGAACTAAAACCACGATG 57.759 37.500 0.00 0.00 0.00 3.84
495 521 7.972832 TTACTCATTGAACTAAAACCACGAT 57.027 32.000 0.00 0.00 0.00 3.73
496 522 7.972832 ATTACTCATTGAACTAAAACCACGA 57.027 32.000 0.00 0.00 0.00 4.35
497 523 8.901748 CAAATTACTCATTGAACTAAAACCACG 58.098 33.333 0.00 0.00 0.00 4.94
498 524 9.191995 CCAAATTACTCATTGAACTAAAACCAC 57.808 33.333 0.00 0.00 0.00 4.16
500 526 9.974980 TTCCAAATTACTCATTGAACTAAAACC 57.025 29.630 0.00 0.00 0.00 3.27
504 530 9.527157 TCCATTCCAAATTACTCATTGAACTAA 57.473 29.630 0.00 0.00 0.00 2.24
505 531 9.177608 CTCCATTCCAAATTACTCATTGAACTA 57.822 33.333 0.00 0.00 0.00 2.24
507 533 7.122650 TCCTCCATTCCAAATTACTCATTGAAC 59.877 37.037 0.00 0.00 0.00 3.18
508 534 7.181361 TCCTCCATTCCAAATTACTCATTGAA 58.819 34.615 0.00 0.00 0.00 2.69
509 535 6.730447 TCCTCCATTCCAAATTACTCATTGA 58.270 36.000 0.00 0.00 0.00 2.57
510 536 7.123247 ACTTCCTCCATTCCAAATTACTCATTG 59.877 37.037 0.00 0.00 0.00 2.82
511 537 7.184862 ACTTCCTCCATTCCAAATTACTCATT 58.815 34.615 0.00 0.00 0.00 2.57
512 538 6.735556 ACTTCCTCCATTCCAAATTACTCAT 58.264 36.000 0.00 0.00 0.00 2.90
513 539 6.139679 ACTTCCTCCATTCCAAATTACTCA 57.860 37.500 0.00 0.00 0.00 3.41
514 540 7.339482 AGTACTTCCTCCATTCCAAATTACTC 58.661 38.462 0.00 0.00 0.00 2.59
515 541 7.272144 AGTACTTCCTCCATTCCAAATTACT 57.728 36.000 0.00 0.00 0.00 2.24
555 581 8.806146 ACTTTGACCAAATCTTATATGCAAACT 58.194 29.630 0.00 0.00 0.00 2.66
556 582 8.986477 ACTTTGACCAAATCTTATATGCAAAC 57.014 30.769 0.00 0.00 0.00 2.93
557 583 8.801299 TGACTTTGACCAAATCTTATATGCAAA 58.199 29.630 0.00 0.00 0.00 3.68
559 585 7.936496 TGACTTTGACCAAATCTTATATGCA 57.064 32.000 0.00 0.00 0.00 3.96
560 586 9.076596 GTTTGACTTTGACCAAATCTTATATGC 57.923 33.333 0.00 0.00 35.14 3.14
662 1344 9.304335 TCAATATGGTTAGATGCATCATGAAAT 57.696 29.630 27.81 16.88 0.00 2.17
663 1345 8.694581 TCAATATGGTTAGATGCATCATGAAA 57.305 30.769 27.81 13.39 0.00 2.69
664 1346 8.873186 ATCAATATGGTTAGATGCATCATGAA 57.127 30.769 27.81 15.61 0.00 2.57
665 1347 8.873186 AATCAATATGGTTAGATGCATCATGA 57.127 30.769 27.81 15.85 0.00 3.07
668 1350 8.694581 TGAAATCAATATGGTTAGATGCATCA 57.305 30.769 27.81 11.65 0.00 3.07
732 1414 9.984190 TGGTTAAAGTCAAACTTTGTTAACTTT 57.016 25.926 17.38 17.38 46.83 2.66
738 1420 9.719355 AAGATTTGGTTAAAGTCAAACTTTGTT 57.281 25.926 13.83 0.00 46.83 2.83
745 1427 9.781834 CGCATATAAGATTTGGTTAAAGTCAAA 57.218 29.630 0.00 0.00 37.29 2.69
746 1428 8.402472 CCGCATATAAGATTTGGTTAAAGTCAA 58.598 33.333 0.00 0.00 0.00 3.18
747 1429 7.771361 TCCGCATATAAGATTTGGTTAAAGTCA 59.229 33.333 0.00 0.00 0.00 3.41
749 1431 7.773690 AGTCCGCATATAAGATTTGGTTAAAGT 59.226 33.333 0.00 0.00 0.00 2.66
751 1433 9.616156 TTAGTCCGCATATAAGATTTGGTTAAA 57.384 29.630 0.00 0.00 0.00 1.52
752 1434 9.616156 TTTAGTCCGCATATAAGATTTGGTTAA 57.384 29.630 0.00 0.00 0.00 2.01
753 1435 9.616156 TTTTAGTCCGCATATAAGATTTGGTTA 57.384 29.630 0.00 0.00 0.00 2.85
754 1436 8.514330 TTTTAGTCCGCATATAAGATTTGGTT 57.486 30.769 0.00 0.00 0.00 3.67
755 1437 8.514330 TTTTTAGTCCGCATATAAGATTTGGT 57.486 30.769 0.00 0.00 0.00 3.67
756 1438 8.836413 TCTTTTTAGTCCGCATATAAGATTTGG 58.164 33.333 0.00 0.00 0.00 3.28
761 1443 7.760794 TCGTTTCTTTTTAGTCCGCATATAAGA 59.239 33.333 0.00 0.00 0.00 2.10
762 1444 7.902032 TCGTTTCTTTTTAGTCCGCATATAAG 58.098 34.615 0.00 0.00 0.00 1.73
763 1445 7.830940 TCGTTTCTTTTTAGTCCGCATATAA 57.169 32.000 0.00 0.00 0.00 0.98
764 1446 7.010738 CCTTCGTTTCTTTTTAGTCCGCATATA 59.989 37.037 0.00 0.00 0.00 0.86
765 1447 6.183360 CCTTCGTTTCTTTTTAGTCCGCATAT 60.183 38.462 0.00 0.00 0.00 1.78
766 1448 5.121142 CCTTCGTTTCTTTTTAGTCCGCATA 59.879 40.000 0.00 0.00 0.00 3.14
767 1449 4.083484 CCTTCGTTTCTTTTTAGTCCGCAT 60.083 41.667 0.00 0.00 0.00 4.73
768 1450 3.249080 CCTTCGTTTCTTTTTAGTCCGCA 59.751 43.478 0.00 0.00 0.00 5.69
770 1452 4.060205 TCCCTTCGTTTCTTTTTAGTCCG 58.940 43.478 0.00 0.00 0.00 4.79
772 1454 7.902387 ATACTCCCTTCGTTTCTTTTTAGTC 57.098 36.000 0.00 0.00 0.00 2.59
773 1455 9.212641 GTAATACTCCCTTCGTTTCTTTTTAGT 57.787 33.333 0.00 0.00 0.00 2.24
776 1458 8.631480 ATGTAATACTCCCTTCGTTTCTTTTT 57.369 30.769 0.00 0.00 0.00 1.94
777 1459 9.729281 TTATGTAATACTCCCTTCGTTTCTTTT 57.271 29.630 0.00 0.00 0.00 2.27
778 1460 9.379791 CTTATGTAATACTCCCTTCGTTTCTTT 57.620 33.333 0.00 0.00 0.00 2.52
779 1461 7.494952 GCTTATGTAATACTCCCTTCGTTTCTT 59.505 37.037 0.00 0.00 0.00 2.52
780 1462 6.985059 GCTTATGTAATACTCCCTTCGTTTCT 59.015 38.462 0.00 0.00 0.00 2.52
781 1463 6.759827 TGCTTATGTAATACTCCCTTCGTTTC 59.240 38.462 0.00 0.00 0.00 2.78
782 1464 6.646267 TGCTTATGTAATACTCCCTTCGTTT 58.354 36.000 0.00 0.00 0.00 3.60
784 1466 5.864418 TGCTTATGTAATACTCCCTTCGT 57.136 39.130 0.00 0.00 0.00 3.85
787 1469 9.067986 GCTTAAATGCTTATGTAATACTCCCTT 57.932 33.333 0.00 0.00 0.00 3.95
789 1471 7.094334 GGGCTTAAATGCTTATGTAATACTCCC 60.094 40.741 0.00 0.00 0.00 4.30
790 1472 7.094334 GGGGCTTAAATGCTTATGTAATACTCC 60.094 40.741 0.00 0.00 0.00 3.85
809 1491 2.303600 ACACTACGTGATTTGGGGCTTA 59.696 45.455 0.00 0.00 36.96 3.09
823 1505 3.428589 GCCTACACCTAGGAAACACTACG 60.429 52.174 17.98 0.00 42.34 3.51
845 1527 5.591643 ACTAACATTGACTTTGCTACACG 57.408 39.130 0.00 0.00 0.00 4.49
846 1528 8.628882 AAAAACTAACATTGACTTTGCTACAC 57.371 30.769 0.00 0.00 0.00 2.90
876 1558 9.296400 GCAAACTAACATGACTTTTTACTCAAA 57.704 29.630 0.00 0.00 0.00 2.69
877 1559 7.918562 GGCAAACTAACATGACTTTTTACTCAA 59.081 33.333 0.00 0.00 0.00 3.02
878 1560 7.422399 GGCAAACTAACATGACTTTTTACTCA 58.578 34.615 0.00 0.00 0.00 3.41
879 1561 6.577427 CGGCAAACTAACATGACTTTTTACTC 59.423 38.462 0.00 0.00 0.00 2.59
881 1563 5.116528 GCGGCAAACTAACATGACTTTTTAC 59.883 40.000 0.00 0.00 0.00 2.01
884 1566 3.638484 GCGGCAAACTAACATGACTTTT 58.362 40.909 0.00 0.00 0.00 2.27
885 1567 2.350388 CGCGGCAAACTAACATGACTTT 60.350 45.455 0.00 0.00 0.00 2.66
888 1570 0.793104 GCGCGGCAAACTAACATGAC 60.793 55.000 8.83 0.00 0.00 3.06
889 1571 1.499949 GCGCGGCAAACTAACATGA 59.500 52.632 8.83 0.00 0.00 3.07
1074 2642 1.152830 GACCTTGAACCAGGCCCAA 59.847 57.895 0.00 0.00 37.47 4.12
1404 2972 1.761784 AGAGCTGCAGATTCGAGGAAT 59.238 47.619 20.43 0.00 34.71 3.01
1539 3108 5.072600 TCCTTTGTATAGTTGAGGTTGTGGT 59.927 40.000 0.00 0.00 0.00 4.16
1576 3145 8.137437 GTGTACGTGTATATTTGTATGTAGGGT 58.863 37.037 0.00 0.00 0.00 4.34
1751 3322 2.747460 GGCTCTTGGACGCATGCA 60.747 61.111 19.57 0.00 0.00 3.96
1902 3473 0.603569 ACGACAGTTACTGCAGGAGG 59.396 55.000 19.93 5.71 34.37 4.30
1991 3565 2.736144 TCGTCTAAGCGACAACCAAT 57.264 45.000 0.00 0.00 42.98 3.16
2064 3638 2.433446 CTGGCTGCCCTGACACTT 59.567 61.111 17.53 0.00 32.15 3.16
2102 3676 2.334006 ACTTCTCTGGAGATGGTGGT 57.666 50.000 14.89 3.19 37.29 4.16
2127 3701 2.596338 TCGGGCTGACACTCACGA 60.596 61.111 0.00 0.00 0.00 4.35
2223 3798 1.832883 TGTTGTTCAGCAGGTGTGTT 58.167 45.000 0.00 0.00 0.00 3.32
2269 3844 1.131883 GTCGGCGCTCTTCAGTACTTA 59.868 52.381 7.64 0.00 0.00 2.24
2336 3911 1.004044 CATGAAGGCCAAGGTCTCTGT 59.996 52.381 5.01 0.00 0.00 3.41
2476 4051 5.193099 ACCTGGGTGCTCTACATTATTTT 57.807 39.130 0.00 0.00 0.00 1.82
2514 4089 4.056125 CTCTCCGGCTGCGTGACA 62.056 66.667 0.00 0.00 0.00 3.58
2802 4377 0.549950 CCATGGCCATCTTGAGGAGT 59.450 55.000 17.61 0.00 0.00 3.85
2874 4449 3.695606 GCACCGTCCTCCAGCTCA 61.696 66.667 0.00 0.00 0.00 4.26
3064 4639 0.179018 GCACTTGGACACTGGTTCCT 60.179 55.000 0.00 0.00 0.00 3.36
3100 4675 1.272781 CGATGCAGGAAGAGTTCGAC 58.727 55.000 0.00 0.00 0.00 4.20
4112 6522 3.324099 CTGGTCGTCTCGTCACCGG 62.324 68.421 0.00 0.00 32.27 5.28
4315 6725 1.089481 CGCATCTTCGGCTGCCTTTA 61.089 55.000 17.92 0.00 33.99 1.85
4497 6907 3.264947 CATCCTTCGCACTCTCAATGAA 58.735 45.455 0.00 0.00 0.00 2.57
4560 6970 2.552315 ACATGGCACGATTTTTCGTCTT 59.448 40.909 0.00 0.00 45.26 3.01
4626 7036 0.808060 TCGCGTTGCAGACAGACAAA 60.808 50.000 5.77 0.00 0.00 2.83
4760 7170 9.003658 CGGGCTTTCTTTATTATCTTGTCATAT 57.996 33.333 0.00 0.00 0.00 1.78
5046 7456 2.584391 GGTTCACTCCGCCACCTCT 61.584 63.158 0.00 0.00 0.00 3.69
5319 7730 2.644299 TCATTCTGTCCACACCTCCAAT 59.356 45.455 0.00 0.00 0.00 3.16
5336 7747 2.423577 GTAACCTTCACACCGCTCATT 58.576 47.619 0.00 0.00 0.00 2.57
5389 7800 1.211703 TGGCGATTGGTACATGGACAT 59.788 47.619 10.99 0.00 39.30 3.06
5409 7820 2.603473 TCCAGCTACACCGGCAGT 60.603 61.111 0.00 2.67 0.00 4.40
5428 7839 1.229951 TCCACAATGCTCCCTCCCT 60.230 57.895 0.00 0.00 0.00 4.20
5637 8048 0.987613 TCCATGCCTACTCCATGCCA 60.988 55.000 0.00 0.00 38.93 4.92
6549 9131 2.750237 GGGAACGCCGCCTTCAAT 60.750 61.111 4.77 0.00 33.83 2.57
6598 9180 1.139734 GCGACGAGCTCCTCATCAA 59.860 57.895 8.47 0.00 44.04 2.57
6718 9301 0.461548 CGCAAGGTCCTGCTCTATGA 59.538 55.000 10.39 0.00 40.33 2.15
6819 9402 2.428890 CACCATCTCTAGCGACCTCTTT 59.571 50.000 0.00 0.00 0.00 2.52
6831 9414 4.211920 GCTAGTTCTACCTCACCATCTCT 58.788 47.826 0.00 0.00 0.00 3.10
6850 9433 2.363711 GACGCCACCATCATCCGCTA 62.364 60.000 0.00 0.00 0.00 4.26
6947 9530 4.083908 GGTATTTTTCGCTTGTGTTCCGTA 60.084 41.667 0.00 0.00 0.00 4.02
6982 9565 1.535687 ACACCACCGCCTCCTACTT 60.536 57.895 0.00 0.00 0.00 2.24
7087 9670 1.965754 GCCATGAGCTCCTCCTCGTT 61.966 60.000 12.15 0.00 38.99 3.85
7931 10621 6.887002 TCCTTCTACATGATATCTATCGCAGT 59.113 38.462 0.00 0.00 35.48 4.40
7991 10681 5.722021 ATATATACGTGTCTGGTGCATCA 57.278 39.130 0.00 0.00 0.00 3.07
7993 10683 7.228314 ACTTATATATACGTGTCTGGTGCAT 57.772 36.000 0.00 0.00 0.00 3.96
8104 10795 4.261801 ACATAAGCTGGTGTATGTTGGTC 58.738 43.478 3.42 0.00 37.61 4.02
8105 10796 4.301072 ACATAAGCTGGTGTATGTTGGT 57.699 40.909 3.42 0.00 37.61 3.67
8129 11813 9.582431 GCAAACATTCATCAGTAGTACTTACTA 57.418 33.333 0.00 0.00 40.68 1.82
8130 11814 8.314751 AGCAAACATTCATCAGTAGTACTTACT 58.685 33.333 0.00 0.00 43.46 2.24
8131 11815 8.383619 CAGCAAACATTCATCAGTAGTACTTAC 58.616 37.037 0.00 0.00 0.00 2.34
8134 11818 5.877012 CCAGCAAACATTCATCAGTAGTACT 59.123 40.000 0.00 0.00 0.00 2.73
8286 16020 3.291101 TTACCTCCGGCGAGCACAC 62.291 63.158 9.30 0.00 34.49 3.82
8304 16038 3.368116 GGTATTAACAGAGCGACAGGTGT 60.368 47.826 0.00 0.00 0.00 4.16
8324 16140 2.785540 TTAATTTCCTAACGCCGGGT 57.214 45.000 2.18 0.00 0.00 5.28
8325 16141 2.551032 GGATTAATTTCCTAACGCCGGG 59.449 50.000 2.18 0.00 32.68 5.73
8333 16149 5.280654 ACGGCGTTAGGATTAATTTCCTA 57.719 39.130 6.77 2.27 44.50 2.94
8336 16152 4.033019 GCAACGGCGTTAGGATTAATTTC 58.967 43.478 26.32 0.80 0.00 2.17
8338 16154 3.011119 TGCAACGGCGTTAGGATTAATT 58.989 40.909 26.32 0.00 45.35 1.40
8339 16155 2.634600 TGCAACGGCGTTAGGATTAAT 58.365 42.857 26.32 0.00 45.35 1.40
8340 16156 2.096220 TGCAACGGCGTTAGGATTAA 57.904 45.000 26.32 3.17 45.35 1.40
8341 16157 1.937223 CATGCAACGGCGTTAGGATTA 59.063 47.619 26.32 8.43 45.35 1.75
8342 16158 0.732571 CATGCAACGGCGTTAGGATT 59.267 50.000 26.32 6.02 45.35 3.01
8343 16159 0.392461 ACATGCAACGGCGTTAGGAT 60.392 50.000 26.32 21.21 45.35 3.24
8344 16160 0.604243 AACATGCAACGGCGTTAGGA 60.604 50.000 26.32 19.96 45.35 2.94
8345 16161 0.454285 CAACATGCAACGGCGTTAGG 60.454 55.000 26.32 15.19 45.35 2.69
8346 16162 0.237235 ACAACATGCAACGGCGTTAG 59.763 50.000 26.32 19.49 45.35 2.34
8347 16163 0.663688 AACAACATGCAACGGCGTTA 59.336 45.000 26.32 11.73 45.35 3.18
8348 16164 0.869454 CAACAACATGCAACGGCGTT 60.869 50.000 21.19 21.19 45.35 4.84
8349 16165 1.299014 CAACAACATGCAACGGCGT 60.299 52.632 6.77 6.77 45.35 5.68
8350 16166 2.015627 CCAACAACATGCAACGGCG 61.016 57.895 4.80 4.80 45.35 6.46
8351 16167 0.249238 TTCCAACAACATGCAACGGC 60.249 50.000 0.00 0.00 41.68 5.68
8352 16168 2.288091 TGATTCCAACAACATGCAACGG 60.288 45.455 0.00 0.00 0.00 4.44
8353 16169 3.010624 TGATTCCAACAACATGCAACG 57.989 42.857 0.00 0.00 0.00 4.10
8354 16170 6.254157 GTCATATGATTCCAACAACATGCAAC 59.746 38.462 9.02 0.00 0.00 4.17
8355 16171 6.331845 GTCATATGATTCCAACAACATGCAA 58.668 36.000 9.02 0.00 0.00 4.08
8356 16172 5.163530 GGTCATATGATTCCAACAACATGCA 60.164 40.000 9.02 0.00 0.00 3.96
8357 16173 5.163530 TGGTCATATGATTCCAACAACATGC 60.164 40.000 9.02 0.00 0.00 4.06
8358 16174 6.453926 TGGTCATATGATTCCAACAACATG 57.546 37.500 9.02 0.00 0.00 3.21
8359 16175 7.479352 TTTGGTCATATGATTCCAACAACAT 57.521 32.000 21.50 0.00 39.26 2.71
8360 16176 6.907853 TTTGGTCATATGATTCCAACAACA 57.092 33.333 21.50 9.23 39.26 3.33
8361 16177 8.686334 AGTATTTGGTCATATGATTCCAACAAC 58.314 33.333 21.50 20.34 39.26 3.32
8362 16178 8.821686 AGTATTTGGTCATATGATTCCAACAA 57.178 30.769 21.50 12.34 39.26 2.83
8363 16179 9.559732 CTAGTATTTGGTCATATGATTCCAACA 57.440 33.333 21.50 15.08 39.26 3.33
8364 16180 9.778741 TCTAGTATTTGGTCATATGATTCCAAC 57.221 33.333 21.50 14.12 39.26 3.77
8763 21249 5.458779 GCCACAGTACTGACAAATCAAAAAC 59.541 40.000 29.30 0.49 33.30 2.43
8810 21299 4.041049 ACGTACGTACTGTAGAGAGATCG 58.959 47.826 21.41 7.85 32.51 3.69
8826 21315 2.438583 GTAGCAAGAGCAGTACGTACG 58.561 52.381 19.49 15.01 45.49 3.67
8864 21353 5.913137 AGAATCAAAATAATTGTCGGCCA 57.087 34.783 2.24 0.00 0.00 5.36
8865 21354 8.696410 TTTAAGAATCAAAATAATTGTCGGCC 57.304 30.769 0.00 0.00 0.00 6.13
8966 21459 8.087750 TGAATTAAAATAGCCACAAAGTTCCAG 58.912 33.333 0.00 0.00 0.00 3.86
9033 21533 4.136796 CCCATGACGTTGATCATAATGGT 58.863 43.478 9.46 0.00 37.20 3.55
9045 21545 1.463674 GGAAATCTGCCCATGACGTT 58.536 50.000 0.00 0.00 0.00 3.99
9071 21571 0.323725 ACTAAATGGGGCCTGTGCTG 60.324 55.000 0.84 0.00 37.74 4.41
9073 21573 2.024414 CTTACTAAATGGGGCCTGTGC 58.976 52.381 0.84 0.00 0.00 4.57
9158 21658 9.618890 ACCACTATAAAGATAGTAACAGACGTA 57.381 33.333 0.00 0.00 45.42 3.57
9159 21659 8.517062 ACCACTATAAAGATAGTAACAGACGT 57.483 34.615 0.00 0.00 45.42 4.34
9195 21695 9.771534 GAGCCTACATCTAAATAAATGAAGACT 57.228 33.333 0.00 0.00 0.00 3.24
9196 21696 9.547753 TGAGCCTACATCTAAATAAATGAAGAC 57.452 33.333 0.00 0.00 0.00 3.01
9202 21702 9.971922 GCAAAATGAGCCTACATCTAAATAAAT 57.028 29.630 0.00 0.00 0.00 1.40
9218 21718 7.710896 ACAGAAATATAGAAGGCAAAATGAGC 58.289 34.615 0.00 0.00 0.00 4.26
9226 21726 9.256477 CGTAACATAACAGAAATATAGAAGGCA 57.744 33.333 0.00 0.00 0.00 4.75
9227 21727 8.709646 CCGTAACATAACAGAAATATAGAAGGC 58.290 37.037 0.00 0.00 0.00 4.35
9228 21728 9.760077 ACCGTAACATAACAGAAATATAGAAGG 57.240 33.333 0.00 0.00 0.00 3.46
9261 21761 9.802039 AGAAAAGAGGTGTTTGTGGTAATATAA 57.198 29.630 0.00 0.00 0.00 0.98
9262 21762 9.802039 AAGAAAAGAGGTGTTTGTGGTAATATA 57.198 29.630 0.00 0.00 0.00 0.86
9263 21763 8.576442 CAAGAAAAGAGGTGTTTGTGGTAATAT 58.424 33.333 0.00 0.00 0.00 1.28
9264 21764 7.776030 TCAAGAAAAGAGGTGTTTGTGGTAATA 59.224 33.333 0.00 0.00 0.00 0.98
9265 21765 6.605594 TCAAGAAAAGAGGTGTTTGTGGTAAT 59.394 34.615 0.00 0.00 0.00 1.89
9266 21766 5.946972 TCAAGAAAAGAGGTGTTTGTGGTAA 59.053 36.000 0.00 0.00 0.00 2.85
9267 21767 5.502079 TCAAGAAAAGAGGTGTTTGTGGTA 58.498 37.500 0.00 0.00 0.00 3.25
9268 21768 4.340617 TCAAGAAAAGAGGTGTTTGTGGT 58.659 39.130 0.00 0.00 0.00 4.16
9269 21769 4.981806 TCAAGAAAAGAGGTGTTTGTGG 57.018 40.909 0.00 0.00 0.00 4.17
9270 21770 5.067674 TGGATCAAGAAAAGAGGTGTTTGTG 59.932 40.000 0.00 0.00 0.00 3.33
9271 21771 5.067805 GTGGATCAAGAAAAGAGGTGTTTGT 59.932 40.000 0.00 0.00 0.00 2.83
9272 21772 5.300286 AGTGGATCAAGAAAAGAGGTGTTTG 59.700 40.000 0.00 0.00 0.00 2.93
9273 21773 5.449553 AGTGGATCAAGAAAAGAGGTGTTT 58.550 37.500 0.00 0.00 0.00 2.83
9274 21774 5.053978 AGTGGATCAAGAAAAGAGGTGTT 57.946 39.130 0.00 0.00 0.00 3.32
9275 21775 4.713792 AGTGGATCAAGAAAAGAGGTGT 57.286 40.909 0.00 0.00 0.00 4.16
9276 21776 6.148480 CACTTAGTGGATCAAGAAAAGAGGTG 59.852 42.308 4.14 0.00 0.00 4.00
9277 21777 6.234177 CACTTAGTGGATCAAGAAAAGAGGT 58.766 40.000 4.14 0.00 0.00 3.85
9278 21778 6.734104 CACTTAGTGGATCAAGAAAAGAGG 57.266 41.667 4.14 0.00 0.00 3.69
9293 21793 3.097614 AGTACACCTAGCCCACTTAGTG 58.902 50.000 5.22 5.22 35.13 2.74
9294 21794 3.097614 CAGTACACCTAGCCCACTTAGT 58.902 50.000 0.00 0.00 0.00 2.24
9295 21795 3.362706 TCAGTACACCTAGCCCACTTAG 58.637 50.000 0.00 0.00 0.00 2.18
9296 21796 3.010920 TCTCAGTACACCTAGCCCACTTA 59.989 47.826 0.00 0.00 0.00 2.24
9297 21797 2.180276 CTCAGTACACCTAGCCCACTT 58.820 52.381 0.00 0.00 0.00 3.16
9298 21798 1.358103 TCTCAGTACACCTAGCCCACT 59.642 52.381 0.00 0.00 0.00 4.00
9299 21799 1.751924 CTCTCAGTACACCTAGCCCAC 59.248 57.143 0.00 0.00 0.00 4.61
9300 21800 1.358103 ACTCTCAGTACACCTAGCCCA 59.642 52.381 0.00 0.00 0.00 5.36
9301 21801 1.751924 CACTCTCAGTACACCTAGCCC 59.248 57.143 0.00 0.00 0.00 5.19
9302 21802 2.724454 TCACTCTCAGTACACCTAGCC 58.276 52.381 0.00 0.00 0.00 3.93
9303 21803 4.993029 AATCACTCTCAGTACACCTAGC 57.007 45.455 0.00 0.00 0.00 3.42
9304 21804 8.458573 AGAATAATCACTCTCAGTACACCTAG 57.541 38.462 0.00 0.00 0.00 3.02
9305 21805 8.687242 CAAGAATAATCACTCTCAGTACACCTA 58.313 37.037 0.00 0.00 0.00 3.08
9306 21806 7.179338 ACAAGAATAATCACTCTCAGTACACCT 59.821 37.037 0.00 0.00 0.00 4.00
9307 21807 7.324178 ACAAGAATAATCACTCTCAGTACACC 58.676 38.462 0.00 0.00 0.00 4.16
9308 21808 9.509855 CTACAAGAATAATCACTCTCAGTACAC 57.490 37.037 0.00 0.00 0.00 2.90
9309 21809 9.462606 TCTACAAGAATAATCACTCTCAGTACA 57.537 33.333 0.00 0.00 0.00 2.90
9321 21821 9.554724 TGCGTTGATTTTTCTACAAGAATAATC 57.445 29.630 18.24 18.24 45.05 1.75
9323 21823 9.906660 AATGCGTTGATTTTTCTACAAGAATAA 57.093 25.926 0.00 0.00 33.67 1.40
9324 21824 9.340695 CAATGCGTTGATTTTTCTACAAGAATA 57.659 29.630 13.63 0.00 37.53 1.75
9325 21825 7.867403 ACAATGCGTTGATTTTTCTACAAGAAT 59.133 29.630 25.13 0.00 38.71 2.40
9326 21826 7.167302 CACAATGCGTTGATTTTTCTACAAGAA 59.833 33.333 25.13 0.00 38.71 2.52
9327 21827 6.636447 CACAATGCGTTGATTTTTCTACAAGA 59.364 34.615 25.13 0.00 38.71 3.02
9328 21828 6.129115 CCACAATGCGTTGATTTTTCTACAAG 60.129 38.462 25.13 0.00 38.71 3.16
9329 21829 5.689514 CCACAATGCGTTGATTTTTCTACAA 59.310 36.000 25.13 0.00 38.71 2.41
9330 21830 5.218885 CCACAATGCGTTGATTTTTCTACA 58.781 37.500 25.13 0.00 38.71 2.74
9331 21831 5.219633 ACCACAATGCGTTGATTTTTCTAC 58.780 37.500 25.13 0.00 38.71 2.59
9332 21832 5.446143 ACCACAATGCGTTGATTTTTCTA 57.554 34.783 25.13 0.00 38.71 2.10
9333 21833 4.320608 ACCACAATGCGTTGATTTTTCT 57.679 36.364 25.13 0.00 38.71 2.52
9334 21834 6.200097 AGTTAACCACAATGCGTTGATTTTTC 59.800 34.615 25.13 9.31 38.71 2.29
9335 21835 6.019156 CAGTTAACCACAATGCGTTGATTTTT 60.019 34.615 25.13 13.43 38.71 1.94
9336 21836 5.461737 CAGTTAACCACAATGCGTTGATTTT 59.538 36.000 25.13 14.99 38.71 1.82
9337 21837 4.981674 CAGTTAACCACAATGCGTTGATTT 59.018 37.500 25.13 15.30 38.71 2.17
9338 21838 4.545610 CAGTTAACCACAATGCGTTGATT 58.454 39.130 25.13 16.60 38.71 2.57
9339 21839 3.057596 CCAGTTAACCACAATGCGTTGAT 60.058 43.478 25.13 10.25 38.71 2.57
9340 21840 2.292016 CCAGTTAACCACAATGCGTTGA 59.708 45.455 25.13 0.00 38.71 3.18
9341 21841 2.606795 CCCAGTTAACCACAATGCGTTG 60.607 50.000 17.16 17.16 41.20 4.10
9342 21842 1.611491 CCCAGTTAACCACAATGCGTT 59.389 47.619 0.88 0.00 0.00 4.84
9343 21843 1.243902 CCCAGTTAACCACAATGCGT 58.756 50.000 0.88 0.00 0.00 5.24
9344 21844 0.109319 GCCCAGTTAACCACAATGCG 60.109 55.000 0.88 0.00 0.00 4.73
9345 21845 0.246360 GGCCCAGTTAACCACAATGC 59.754 55.000 0.88 0.00 0.00 3.56
9346 21846 1.545582 CAGGCCCAGTTAACCACAATG 59.454 52.381 0.00 0.00 0.00 2.82
9347 21847 1.427368 TCAGGCCCAGTTAACCACAAT 59.573 47.619 0.00 0.00 0.00 2.71
9348 21848 0.847373 TCAGGCCCAGTTAACCACAA 59.153 50.000 0.00 0.00 0.00 3.33
9349 21849 0.847373 TTCAGGCCCAGTTAACCACA 59.153 50.000 0.00 0.00 0.00 4.17
9350 21850 1.534729 CTTCAGGCCCAGTTAACCAC 58.465 55.000 0.00 0.00 0.00 4.16
9351 21851 0.251165 GCTTCAGGCCCAGTTAACCA 60.251 55.000 0.00 0.00 34.27 3.67
9352 21852 0.038310 AGCTTCAGGCCCAGTTAACC 59.962 55.000 0.00 0.00 43.05 2.85
9353 21853 1.541588 CAAGCTTCAGGCCCAGTTAAC 59.458 52.381 0.00 0.00 43.05 2.01
9354 21854 1.909700 CAAGCTTCAGGCCCAGTTAA 58.090 50.000 0.00 0.00 43.05 2.01
9355 21855 0.609131 GCAAGCTTCAGGCCCAGTTA 60.609 55.000 0.00 0.00 43.05 2.24
9356 21856 1.905354 GCAAGCTTCAGGCCCAGTT 60.905 57.895 0.00 0.00 43.05 3.16
9357 21857 2.282745 GCAAGCTTCAGGCCCAGT 60.283 61.111 0.00 0.00 43.05 4.00
9358 21858 2.282674 TGCAAGCTTCAGGCCCAG 60.283 61.111 0.00 0.00 43.05 4.45
9359 21859 2.598394 GTGCAAGCTTCAGGCCCA 60.598 61.111 0.00 0.00 43.05 5.36
9360 21860 1.747325 TTTGTGCAAGCTTCAGGCCC 61.747 55.000 0.00 0.00 43.05 5.80
9361 21861 0.319297 CTTTGTGCAAGCTTCAGGCC 60.319 55.000 0.00 0.00 43.05 5.19
9362 21862 3.190337 CTTTGTGCAAGCTTCAGGC 57.810 52.632 0.00 0.00 42.19 4.85
9370 21870 1.938016 GCTTGATGGGCTTTGTGCAAG 60.938 52.381 0.00 0.00 45.15 4.01
9371 21871 0.033781 GCTTGATGGGCTTTGTGCAA 59.966 50.000 0.00 0.00 45.15 4.08
9372 21872 1.114119 TGCTTGATGGGCTTTGTGCA 61.114 50.000 0.00 0.00 45.15 4.57
9373 21873 0.033781 TTGCTTGATGGGCTTTGTGC 59.966 50.000 0.00 0.00 41.94 4.57
9374 21874 1.342174 ACTTGCTTGATGGGCTTTGTG 59.658 47.619 0.00 0.00 0.00 3.33
9375 21875 1.708341 ACTTGCTTGATGGGCTTTGT 58.292 45.000 0.00 0.00 0.00 2.83
9376 21876 2.094545 GGTACTTGCTTGATGGGCTTTG 60.095 50.000 0.00 0.00 0.00 2.77
9377 21877 2.171003 GGTACTTGCTTGATGGGCTTT 58.829 47.619 0.00 0.00 0.00 3.51
9378 21878 1.355720 AGGTACTTGCTTGATGGGCTT 59.644 47.619 0.00 0.00 27.25 4.35
9379 21879 0.995024 AGGTACTTGCTTGATGGGCT 59.005 50.000 0.00 0.00 27.25 5.19
9380 21880 2.565841 CTAGGTACTTGCTTGATGGGC 58.434 52.381 0.00 0.00 41.75 5.36
9381 21881 2.746472 GCCTAGGTACTTGCTTGATGGG 60.746 54.545 11.31 0.00 41.75 4.00
9382 21882 2.565841 GCCTAGGTACTTGCTTGATGG 58.434 52.381 11.31 0.00 41.75 3.51
9383 21883 2.565841 GGCCTAGGTACTTGCTTGATG 58.434 52.381 11.31 0.00 41.75 3.07
9384 21884 1.490910 GGGCCTAGGTACTTGCTTGAT 59.509 52.381 11.31 0.00 41.75 2.57
9385 21885 0.909623 GGGCCTAGGTACTTGCTTGA 59.090 55.000 11.31 0.00 41.75 3.02
9386 21886 0.912486 AGGGCCTAGGTACTTGCTTG 59.088 55.000 2.82 0.00 41.75 4.01
9387 21887 1.282157 CAAGGGCCTAGGTACTTGCTT 59.718 52.381 24.80 10.46 41.75 3.91
9388 21888 0.912486 CAAGGGCCTAGGTACTTGCT 59.088 55.000 24.80 6.05 41.75 3.91
9389 21889 0.107165 CCAAGGGCCTAGGTACTTGC 60.107 60.000 28.12 9.28 41.75 4.01
9390 21890 1.486726 CTCCAAGGGCCTAGGTACTTG 59.513 57.143 27.25 27.25 41.75 3.16
9391 21891 1.880941 CTCCAAGGGCCTAGGTACTT 58.119 55.000 6.41 12.07 41.75 2.24
9392 21892 0.691413 GCTCCAAGGGCCTAGGTACT 60.691 60.000 6.41 6.08 46.37 2.73
9393 21893 0.691413 AGCTCCAAGGGCCTAGGTAC 60.691 60.000 6.41 3.73 0.00 3.34
9394 21894 0.398664 GAGCTCCAAGGGCCTAGGTA 60.399 60.000 6.41 0.00 0.00 3.08
9395 21895 1.690985 GAGCTCCAAGGGCCTAGGT 60.691 63.158 6.41 6.29 0.00 3.08
9396 21896 2.447714 GGAGCTCCAAGGGCCTAGG 61.448 68.421 28.43 3.67 35.64 3.02
9397 21897 0.105453 TAGGAGCTCCAAGGGCCTAG 60.105 60.000 33.90 0.85 38.89 3.02
9398 21898 0.398664 GTAGGAGCTCCAAGGGCCTA 60.399 60.000 33.90 13.30 38.89 3.93
9399 21899 1.690985 GTAGGAGCTCCAAGGGCCT 60.691 63.158 33.90 14.38 38.89 5.19
9400 21900 1.995626 TGTAGGAGCTCCAAGGGCC 60.996 63.158 33.90 14.61 38.89 5.80
9401 21901 1.222113 GTGTAGGAGCTCCAAGGGC 59.778 63.158 33.90 18.05 38.89 5.19
9402 21902 0.250513 GTGTGTAGGAGCTCCAAGGG 59.749 60.000 33.90 0.00 38.89 3.95
9403 21903 0.976641 TGTGTGTAGGAGCTCCAAGG 59.023 55.000 33.90 0.00 38.89 3.61
9404 21904 1.674221 GCTGTGTGTAGGAGCTCCAAG 60.674 57.143 33.90 18.39 38.89 3.61
9405 21905 0.321671 GCTGTGTGTAGGAGCTCCAA 59.678 55.000 33.90 16.64 38.89 3.53
9406 21906 1.877576 CGCTGTGTGTAGGAGCTCCA 61.878 60.000 33.90 17.39 38.89 3.86
9407 21907 1.153745 CGCTGTGTGTAGGAGCTCC 60.154 63.158 26.22 26.22 0.00 4.70
9408 21908 0.456995 GACGCTGTGTGTAGGAGCTC 60.457 60.000 4.71 4.71 0.00 4.09
9409 21909 0.896019 AGACGCTGTGTGTAGGAGCT 60.896 55.000 0.00 0.00 0.00 4.09
9410 21910 0.038159 AAGACGCTGTGTGTAGGAGC 60.038 55.000 0.00 0.00 0.00 4.70
9411 21911 1.702886 CAAGACGCTGTGTGTAGGAG 58.297 55.000 0.00 0.00 0.00 3.69
9412 21912 0.319555 GCAAGACGCTGTGTGTAGGA 60.320 55.000 0.00 0.00 37.77 2.94
9413 21913 1.617755 CGCAAGACGCTGTGTGTAGG 61.618 60.000 0.00 0.00 39.08 3.18
9414 21914 1.775344 CGCAAGACGCTGTGTGTAG 59.225 57.895 0.00 0.00 39.08 2.74
9415 21915 3.930838 CGCAAGACGCTGTGTGTA 58.069 55.556 0.00 0.00 39.08 2.90
9424 21924 4.505217 GGCATCGTGCGCAAGACG 62.505 66.667 27.96 21.49 46.21 4.18
9425 21925 4.505217 CGGCATCGTGCGCAAGAC 62.505 66.667 27.96 16.01 46.21 3.01
9433 21933 4.899239 GGAGCTCCCGGCATCGTG 62.899 72.222 23.19 0.00 44.79 4.35
9434 21934 3.733507 TAGGAGCTCCCGGCATCGT 62.734 63.158 29.54 10.66 44.79 3.73
9435 21935 2.912542 TAGGAGCTCCCGGCATCG 60.913 66.667 29.54 0.00 44.79 3.84
9436 21936 1.403687 AACTAGGAGCTCCCGGCATC 61.404 60.000 29.54 2.09 44.79 3.91
9437 21937 1.383248 AACTAGGAGCTCCCGGCAT 60.383 57.895 29.54 13.02 44.79 4.40
9438 21938 2.038975 AACTAGGAGCTCCCGGCA 59.961 61.111 29.54 11.21 44.79 5.69
9439 21939 2.501610 CAACTAGGAGCTCCCGGC 59.498 66.667 29.54 4.15 40.87 6.13
9440 21940 3.095347 GCCAACTAGGAGCTCCCGG 62.095 68.421 29.54 22.84 41.22 5.73
9441 21941 2.501610 GCCAACTAGGAGCTCCCG 59.498 66.667 29.54 22.05 41.22 5.14
9442 21942 2.501610 CGCCAACTAGGAGCTCCC 59.498 66.667 29.54 10.94 41.22 4.30
9447 21947 0.460987 CAGAAGGCGCCAACTAGGAG 60.461 60.000 31.54 10.97 41.22 3.69
9448 21948 1.596934 CAGAAGGCGCCAACTAGGA 59.403 57.895 31.54 0.00 41.22 2.94
9449 21949 2.109126 GCAGAAGGCGCCAACTAGG 61.109 63.158 31.54 16.10 41.84 3.02
9450 21950 3.490890 GCAGAAGGCGCCAACTAG 58.509 61.111 31.54 19.75 0.00 2.57
9459 21959 3.497031 GTAACCGGCGCAGAAGGC 61.497 66.667 10.83 0.00 39.90 4.35
9460 21960 2.798148 AAGGTAACCGGCGCAGAAGG 62.798 60.000 10.83 9.43 37.17 3.46
9461 21961 0.108520 TAAGGTAACCGGCGCAGAAG 60.109 55.000 10.83 0.00 37.17 2.85
9462 21962 0.321021 TTAAGGTAACCGGCGCAGAA 59.679 50.000 10.83 0.00 37.17 3.02
9463 21963 0.108520 CTTAAGGTAACCGGCGCAGA 60.109 55.000 10.83 0.00 37.17 4.26
9464 21964 0.390735 ACTTAAGGTAACCGGCGCAG 60.391 55.000 10.83 4.65 37.17 5.18
9465 21965 0.671163 CACTTAAGGTAACCGGCGCA 60.671 55.000 10.83 0.00 37.17 6.09
9466 21966 1.363885 CCACTTAAGGTAACCGGCGC 61.364 60.000 0.00 0.00 37.17 6.53
9467 21967 1.363885 GCCACTTAAGGTAACCGGCG 61.364 60.000 0.00 0.00 37.17 6.46
9468 21968 1.363885 CGCCACTTAAGGTAACCGGC 61.364 60.000 0.00 7.65 34.68 6.13
9469 21969 1.363885 GCGCCACTTAAGGTAACCGG 61.364 60.000 7.53 0.00 37.17 5.28
9470 21970 1.363885 GGCGCCACTTAAGGTAACCG 61.364 60.000 24.80 3.52 37.17 4.44
9471 21971 0.035725 AGGCGCCACTTAAGGTAACC 60.036 55.000 31.54 1.80 37.17 2.85
9472 21972 1.084289 CAGGCGCCACTTAAGGTAAC 58.916 55.000 31.54 0.00 0.00 2.50
9473 21973 0.688487 ACAGGCGCCACTTAAGGTAA 59.312 50.000 31.54 0.00 0.00 2.85
9474 21974 1.479323 CTACAGGCGCCACTTAAGGTA 59.521 52.381 31.54 16.32 0.00 3.08
9475 21975 0.249398 CTACAGGCGCCACTTAAGGT 59.751 55.000 31.54 16.06 0.00 3.50
9476 21976 0.462047 CCTACAGGCGCCACTTAAGG 60.462 60.000 31.54 22.18 0.00 2.69
9477 21977 0.462047 CCCTACAGGCGCCACTTAAG 60.462 60.000 31.54 17.32 0.00 1.85
9478 21978 1.600107 CCCTACAGGCGCCACTTAA 59.400 57.895 31.54 8.05 0.00 1.85
9479 21979 3.305314 CCCTACAGGCGCCACTTA 58.695 61.111 31.54 15.12 0.00 2.24
9488 21988 2.813908 GCAACGACGCCCTACAGG 60.814 66.667 0.00 0.00 39.47 4.00
9489 21989 2.094659 CAGCAACGACGCCCTACAG 61.095 63.158 0.00 0.00 0.00 2.74
9490 21990 2.048597 CAGCAACGACGCCCTACA 60.049 61.111 0.00 0.00 0.00 2.74
9491 21991 2.813908 CCAGCAACGACGCCCTAC 60.814 66.667 0.00 0.00 0.00 3.18
9492 21992 4.077184 CCCAGCAACGACGCCCTA 62.077 66.667 0.00 0.00 0.00 3.53
9497 21997 2.443957 GAAACAGCCCAGCAACGACG 62.444 60.000 0.00 0.00 0.00 5.12
9498 21998 1.166531 AGAAACAGCCCAGCAACGAC 61.167 55.000 0.00 0.00 0.00 4.34
9499 21999 0.465460 AAGAAACAGCCCAGCAACGA 60.465 50.000 0.00 0.00 0.00 3.85
9500 22000 0.040067 GAAGAAACAGCCCAGCAACG 60.040 55.000 0.00 0.00 0.00 4.10
9501 22001 1.032014 TGAAGAAACAGCCCAGCAAC 58.968 50.000 0.00 0.00 0.00 4.17
9502 22002 1.032014 GTGAAGAAACAGCCCAGCAA 58.968 50.000 0.00 0.00 0.00 3.91
9503 22003 0.183492 AGTGAAGAAACAGCCCAGCA 59.817 50.000 0.00 0.00 0.00 4.41
9504 22004 0.595095 CAGTGAAGAAACAGCCCAGC 59.405 55.000 0.00 0.00 0.00 4.85
9505 22005 1.242076 CCAGTGAAGAAACAGCCCAG 58.758 55.000 0.00 0.00 0.00 4.45
9506 22006 0.823356 GCCAGTGAAGAAACAGCCCA 60.823 55.000 0.00 0.00 0.00 5.36
9507 22007 1.527433 GGCCAGTGAAGAAACAGCCC 61.527 60.000 0.00 0.00 36.34 5.19
9508 22008 1.527433 GGGCCAGTGAAGAAACAGCC 61.527 60.000 4.39 0.00 39.69 4.85
9509 22009 0.823356 TGGGCCAGTGAAGAAACAGC 60.823 55.000 0.00 0.00 0.00 4.40
9510 22010 1.610522 CTTGGGCCAGTGAAGAAACAG 59.389 52.381 6.23 0.00 0.00 3.16
9511 22011 1.064017 ACTTGGGCCAGTGAAGAAACA 60.064 47.619 6.23 0.00 0.00 2.83
9512 22012 1.692411 ACTTGGGCCAGTGAAGAAAC 58.308 50.000 6.23 0.00 0.00 2.78
9513 22013 2.441750 ACTACTTGGGCCAGTGAAGAAA 59.558 45.455 6.23 0.00 0.00 2.52
9514 22014 2.054799 ACTACTTGGGCCAGTGAAGAA 58.945 47.619 6.23 0.00 0.00 2.52
9515 22015 1.729586 ACTACTTGGGCCAGTGAAGA 58.270 50.000 6.23 0.00 0.00 2.87
9516 22016 2.154462 CAACTACTTGGGCCAGTGAAG 58.846 52.381 6.23 3.44 0.00 3.02
9517 22017 1.817740 GCAACTACTTGGGCCAGTGAA 60.818 52.381 6.23 0.00 0.00 3.18
9518 22018 0.250727 GCAACTACTTGGGCCAGTGA 60.251 55.000 6.23 0.00 0.00 3.41
9519 22019 1.577328 CGCAACTACTTGGGCCAGTG 61.577 60.000 6.23 6.70 33.94 3.66
9520 22020 1.302511 CGCAACTACTTGGGCCAGT 60.303 57.895 6.23 10.04 33.94 4.00
9521 22021 3.578456 CGCAACTACTTGGGCCAG 58.422 61.111 6.23 3.69 33.94 4.85
9525 22025 1.017177 TAAGCGCGCAACTACTTGGG 61.017 55.000 35.10 0.00 42.04 4.12
9526 22026 1.006832 ATAAGCGCGCAACTACTTGG 58.993 50.000 35.10 0.00 0.00 3.61
9527 22027 2.858344 AGTATAAGCGCGCAACTACTTG 59.142 45.455 35.10 0.00 0.00 3.16
9528 22028 2.858344 CAGTATAAGCGCGCAACTACTT 59.142 45.455 35.10 19.81 0.00 2.24
9529 22029 2.159282 ACAGTATAAGCGCGCAACTACT 60.159 45.455 35.10 28.64 0.00 2.57
9530 22030 2.190981 ACAGTATAAGCGCGCAACTAC 58.809 47.619 35.10 27.02 0.00 2.73
9531 22031 2.572191 ACAGTATAAGCGCGCAACTA 57.428 45.000 35.10 21.04 0.00 2.24
9532 22032 1.722011 AACAGTATAAGCGCGCAACT 58.278 45.000 35.10 25.47 0.00 3.16
9533 22033 2.093783 AGAAACAGTATAAGCGCGCAAC 59.906 45.455 35.10 23.67 0.00 4.17
9534 22034 2.343101 AGAAACAGTATAAGCGCGCAA 58.657 42.857 35.10 21.70 0.00 4.85
9535 22035 2.004583 AGAAACAGTATAAGCGCGCA 57.995 45.000 35.10 14.88 0.00 6.09
9536 22036 2.594498 CGAAGAAACAGTATAAGCGCGC 60.594 50.000 26.66 26.66 0.00 6.86
9537 22037 2.597305 ACGAAGAAACAGTATAAGCGCG 59.403 45.455 0.00 0.00 0.00 6.86
9538 22038 4.326548 AGAACGAAGAAACAGTATAAGCGC 59.673 41.667 0.00 0.00 0.00 5.92
9539 22039 5.721510 GCAGAACGAAGAAACAGTATAAGCG 60.722 44.000 0.00 0.00 0.00 4.68
9540 22040 5.348997 AGCAGAACGAAGAAACAGTATAAGC 59.651 40.000 0.00 0.00 0.00 3.09
9541 22041 6.952935 AGCAGAACGAAGAAACAGTATAAG 57.047 37.500 0.00 0.00 0.00 1.73
9542 22042 8.997621 AATAGCAGAACGAAGAAACAGTATAA 57.002 30.769 0.00 0.00 0.00 0.98
9543 22043 8.869897 CAAATAGCAGAACGAAGAAACAGTATA 58.130 33.333 0.00 0.00 0.00 1.47
9544 22044 7.387948 ACAAATAGCAGAACGAAGAAACAGTAT 59.612 33.333 0.00 0.00 0.00 2.12
9545 22045 6.704493 ACAAATAGCAGAACGAAGAAACAGTA 59.296 34.615 0.00 0.00 0.00 2.74
9546 22046 5.527582 ACAAATAGCAGAACGAAGAAACAGT 59.472 36.000 0.00 0.00 0.00 3.55
9547 22047 5.990408 ACAAATAGCAGAACGAAGAAACAG 58.010 37.500 0.00 0.00 0.00 3.16
9548 22048 6.371809 AACAAATAGCAGAACGAAGAAACA 57.628 33.333 0.00 0.00 0.00 2.83
9549 22049 5.560378 CGAACAAATAGCAGAACGAAGAAAC 59.440 40.000 0.00 0.00 0.00 2.78
9550 22050 5.235616 ACGAACAAATAGCAGAACGAAGAAA 59.764 36.000 0.00 0.00 0.00 2.52
9551 22051 4.748102 ACGAACAAATAGCAGAACGAAGAA 59.252 37.500 0.00 0.00 0.00 2.52
9552 22052 4.304110 ACGAACAAATAGCAGAACGAAGA 58.696 39.130 0.00 0.00 0.00 2.87
9553 22053 4.647291 ACGAACAAATAGCAGAACGAAG 57.353 40.909 0.00 0.00 0.00 3.79
9554 22054 4.748102 AGAACGAACAAATAGCAGAACGAA 59.252 37.500 0.00 0.00 0.00 3.85
9555 22055 4.304110 AGAACGAACAAATAGCAGAACGA 58.696 39.130 0.00 0.00 0.00 3.85
9556 22056 4.647291 AGAACGAACAAATAGCAGAACG 57.353 40.909 0.00 0.00 0.00 3.95
9557 22057 7.519002 ACAATAGAACGAACAAATAGCAGAAC 58.481 34.615 0.00 0.00 0.00 3.01
9558 22058 7.667043 ACAATAGAACGAACAAATAGCAGAA 57.333 32.000 0.00 0.00 0.00 3.02
9559 22059 7.667043 AACAATAGAACGAACAAATAGCAGA 57.333 32.000 0.00 0.00 0.00 4.26
9560 22060 8.230486 AGAAACAATAGAACGAACAAATAGCAG 58.770 33.333 0.00 0.00 0.00 4.24
9561 22061 8.094798 AGAAACAATAGAACGAACAAATAGCA 57.905 30.769 0.00 0.00 0.00 3.49
9562 22062 8.950403 AAGAAACAATAGAACGAACAAATAGC 57.050 30.769 0.00 0.00 0.00 2.97
9566 22066 8.553696 GGTAGAAGAAACAATAGAACGAACAAA 58.446 33.333 0.00 0.00 0.00 2.83
9567 22067 7.929785 AGGTAGAAGAAACAATAGAACGAACAA 59.070 33.333 0.00 0.00 0.00 2.83
9568 22068 7.439381 AGGTAGAAGAAACAATAGAACGAACA 58.561 34.615 0.00 0.00 0.00 3.18
9569 22069 7.886405 AGGTAGAAGAAACAATAGAACGAAC 57.114 36.000 0.00 0.00 0.00 3.95
9570 22070 8.897872 AAAGGTAGAAGAAACAATAGAACGAA 57.102 30.769 0.00 0.00 0.00 3.85
9571 22071 7.327761 CGAAAGGTAGAAGAAACAATAGAACGA 59.672 37.037 0.00 0.00 0.00 3.85
9572 22072 7.327761 TCGAAAGGTAGAAGAAACAATAGAACG 59.672 37.037 0.00 0.00 0.00 3.95
9573 22073 8.433893 GTCGAAAGGTAGAAGAAACAATAGAAC 58.566 37.037 0.00 0.00 0.00 3.01
9574 22074 8.145767 TGTCGAAAGGTAGAAGAAACAATAGAA 58.854 33.333 0.00 0.00 0.00 2.10
9575 22075 7.663827 TGTCGAAAGGTAGAAGAAACAATAGA 58.336 34.615 0.00 0.00 0.00 1.98
9576 22076 7.884816 TGTCGAAAGGTAGAAGAAACAATAG 57.115 36.000 0.00 0.00 0.00 1.73
9577 22077 8.842358 ATTGTCGAAAGGTAGAAGAAACAATA 57.158 30.769 0.00 0.00 34.16 1.90
9578 22078 7.745620 ATTGTCGAAAGGTAGAAGAAACAAT 57.254 32.000 0.00 0.00 31.82 2.71
9579 22079 7.711772 TGTATTGTCGAAAGGTAGAAGAAACAA 59.288 33.333 0.00 0.00 0.00 2.83
9580 22080 7.211573 TGTATTGTCGAAAGGTAGAAGAAACA 58.788 34.615 0.00 0.00 0.00 2.83
9581 22081 7.647907 TGTATTGTCGAAAGGTAGAAGAAAC 57.352 36.000 0.00 0.00 0.00 2.78
9582 22082 8.842358 ATTGTATTGTCGAAAGGTAGAAGAAA 57.158 30.769 0.00 0.00 0.00 2.52
9583 22083 8.842358 AATTGTATTGTCGAAAGGTAGAAGAA 57.158 30.769 0.00 0.00 0.00 2.52
9584 22084 7.274904 CGAATTGTATTGTCGAAAGGTAGAAGA 59.725 37.037 0.00 0.00 36.92 2.87
9585 22085 7.274904 TCGAATTGTATTGTCGAAAGGTAGAAG 59.725 37.037 0.00 0.00 40.59 2.85
9586 22086 7.092079 TCGAATTGTATTGTCGAAAGGTAGAA 58.908 34.615 0.00 0.00 40.59 2.10
9587 22087 6.623486 TCGAATTGTATTGTCGAAAGGTAGA 58.377 36.000 0.00 0.00 40.59 2.59
9588 22088 6.880822 TCGAATTGTATTGTCGAAAGGTAG 57.119 37.500 0.00 0.00 40.59 3.18
9595 22095 3.991121 TGCAGTTCGAATTGTATTGTCGA 59.009 39.130 20.11 0.00 41.72 4.20
9596 22096 4.320667 TGCAGTTCGAATTGTATTGTCG 57.679 40.909 20.11 0.00 36.12 4.35
9597 22097 7.566858 AATTTGCAGTTCGAATTGTATTGTC 57.433 32.000 20.11 4.93 37.38 3.18
9598 22098 7.867403 AGAAATTTGCAGTTCGAATTGTATTGT 59.133 29.630 20.11 5.25 38.47 2.71
9599 22099 8.231304 AGAAATTTGCAGTTCGAATTGTATTG 57.769 30.769 20.11 5.68 38.47 1.90
9600 22100 8.816640 AAGAAATTTGCAGTTCGAATTGTATT 57.183 26.923 20.11 14.28 38.47 1.89
9601 22101 8.816640 AAAGAAATTTGCAGTTCGAATTGTAT 57.183 26.923 20.11 9.92 38.47 2.29
9602 22102 8.134895 AGAAAGAAATTTGCAGTTCGAATTGTA 58.865 29.630 20.11 14.20 38.47 2.41
9603 22103 6.980397 AGAAAGAAATTTGCAGTTCGAATTGT 59.020 30.769 20.11 1.06 38.47 2.71
9604 22104 7.167968 TCAGAAAGAAATTTGCAGTTCGAATTG 59.832 33.333 15.68 15.68 38.47 2.32
9605 22105 7.202526 TCAGAAAGAAATTTGCAGTTCGAATT 58.797 30.769 0.00 0.00 39.80 2.17
9606 22106 6.738114 TCAGAAAGAAATTTGCAGTTCGAAT 58.262 32.000 0.00 0.00 32.00 3.34
9607 22107 6.130298 TCAGAAAGAAATTTGCAGTTCGAA 57.870 33.333 0.00 0.00 32.00 3.71
9608 22108 5.749596 TCAGAAAGAAATTTGCAGTTCGA 57.250 34.783 0.00 0.00 32.00 3.71
9609 22109 6.998258 ATTCAGAAAGAAATTTGCAGTTCG 57.002 33.333 0.00 0.00 40.22 3.95
9610 22110 8.801715 TGTATTCAGAAAGAAATTTGCAGTTC 57.198 30.769 0.00 0.00 40.22 3.01
9645 22145 9.941325 TGTTCCATATTTTGTTCAAGCATATTT 57.059 25.926 0.00 0.00 0.00 1.40
9646 22146 9.941325 TTGTTCCATATTTTGTTCAAGCATATT 57.059 25.926 0.00 0.00 0.00 1.28
9647 22147 9.941325 TTTGTTCCATATTTTGTTCAAGCATAT 57.059 25.926 0.00 0.00 0.00 1.78
9648 22148 9.202273 GTTTGTTCCATATTTTGTTCAAGCATA 57.798 29.630 0.00 0.00 0.00 3.14
9649 22149 7.933033 AGTTTGTTCCATATTTTGTTCAAGCAT 59.067 29.630 0.00 0.00 0.00 3.79
9650 22150 7.271511 AGTTTGTTCCATATTTTGTTCAAGCA 58.728 30.769 0.00 0.00 0.00 3.91
9651 22151 7.713764 AGTTTGTTCCATATTTTGTTCAAGC 57.286 32.000 0.00 0.00 0.00 4.01
9653 22153 9.883142 AGAAAGTTTGTTCCATATTTTGTTCAA 57.117 25.926 0.00 0.00 0.00 2.69
9654 22154 9.883142 AAGAAAGTTTGTTCCATATTTTGTTCA 57.117 25.926 0.00 0.00 0.00 3.18
9662 22162 9.927668 CCATTGTTAAGAAAGTTTGTTCCATAT 57.072 29.630 0.56 0.00 0.00 1.78
9663 22163 9.137459 TCCATTGTTAAGAAAGTTTGTTCCATA 57.863 29.630 0.56 0.00 0.00 2.74
9664 22164 8.017418 TCCATTGTTAAGAAAGTTTGTTCCAT 57.983 30.769 0.56 0.00 0.00 3.41
9665 22165 7.411486 TCCATTGTTAAGAAAGTTTGTTCCA 57.589 32.000 0.56 0.00 0.00 3.53
9666 22166 8.710835 TTTCCATTGTTAAGAAAGTTTGTTCC 57.289 30.769 0.56 0.00 0.00 3.62
9672 22172 9.764363 GGAGATTTTTCCATTGTTAAGAAAGTT 57.236 29.630 0.00 0.00 37.20 2.66
9673 22173 8.923270 TGGAGATTTTTCCATTGTTAAGAAAGT 58.077 29.630 0.00 0.00 42.24 2.66
9687 22187 7.687941 TTCTGTGACTTATGGAGATTTTTCC 57.312 36.000 0.00 0.00 37.77 3.13
9688 22188 8.023706 GGTTTCTGTGACTTATGGAGATTTTTC 58.976 37.037 0.00 0.00 0.00 2.29
9689 22189 7.725844 AGGTTTCTGTGACTTATGGAGATTTTT 59.274 33.333 0.00 0.00 0.00 1.94
9690 22190 7.175641 CAGGTTTCTGTGACTTATGGAGATTTT 59.824 37.037 0.00 0.00 36.30 1.82
9691 22191 6.656693 CAGGTTTCTGTGACTTATGGAGATTT 59.343 38.462 0.00 0.00 36.30 2.17
9692 22192 6.176183 CAGGTTTCTGTGACTTATGGAGATT 58.824 40.000 0.00 0.00 36.30 2.40
9693 22193 5.738909 CAGGTTTCTGTGACTTATGGAGAT 58.261 41.667 0.00 0.00 36.30 2.75
9694 22194 4.563580 GCAGGTTTCTGTGACTTATGGAGA 60.564 45.833 0.00 0.00 42.78 3.71
9695 22195 3.686726 GCAGGTTTCTGTGACTTATGGAG 59.313 47.826 0.00 0.00 42.78 3.86
9696 22196 3.327757 AGCAGGTTTCTGTGACTTATGGA 59.672 43.478 0.00 0.00 42.78 3.41
9697 22197 3.438087 CAGCAGGTTTCTGTGACTTATGG 59.562 47.826 0.00 0.00 42.78 2.74
9698 22198 4.318332 TCAGCAGGTTTCTGTGACTTATG 58.682 43.478 0.00 0.00 42.78 1.90
9699 22199 4.623932 TCAGCAGGTTTCTGTGACTTAT 57.376 40.909 0.00 0.00 42.78 1.73
9700 22200 4.623932 ATCAGCAGGTTTCTGTGACTTA 57.376 40.909 0.00 0.00 42.78 2.24
9701 22201 3.498774 ATCAGCAGGTTTCTGTGACTT 57.501 42.857 0.00 0.00 42.78 3.01
9702 22202 3.144506 CAATCAGCAGGTTTCTGTGACT 58.855 45.455 0.00 0.00 42.78 3.41
9703 22203 3.141398 TCAATCAGCAGGTTTCTGTGAC 58.859 45.455 0.00 0.00 42.78 3.67
9704 22204 3.490439 TCAATCAGCAGGTTTCTGTGA 57.510 42.857 0.00 0.00 42.78 3.58
9705 22205 4.572985 TTTCAATCAGCAGGTTTCTGTG 57.427 40.909 0.00 0.00 42.78 3.66
9706 22206 5.075493 AGATTTCAATCAGCAGGTTTCTGT 58.925 37.500 2.43 0.00 39.22 3.41
9707 22207 5.640189 AGATTTCAATCAGCAGGTTTCTG 57.360 39.130 2.43 0.00 39.61 3.02
9708 22208 6.661304 AAAGATTTCAATCAGCAGGTTTCT 57.339 33.333 2.43 0.00 37.89 2.52
9709 22209 8.299570 TCTTAAAGATTTCAATCAGCAGGTTTC 58.700 33.333 2.43 0.00 37.89 2.78
9710 22210 8.181904 TCTTAAAGATTTCAATCAGCAGGTTT 57.818 30.769 2.43 0.00 37.89 3.27
9711 22211 7.765695 TCTTAAAGATTTCAATCAGCAGGTT 57.234 32.000 2.43 0.00 37.89 3.50
9712 22212 7.765695 TTCTTAAAGATTTCAATCAGCAGGT 57.234 32.000 2.43 0.00 37.89 4.00
9713 22213 9.649167 AAATTCTTAAAGATTTCAATCAGCAGG 57.351 29.630 2.43 0.00 37.89 4.85
9715 22215 9.426837 CCAAATTCTTAAAGATTTCAATCAGCA 57.573 29.630 2.43 0.00 37.89 4.41
9716 22216 9.643693 TCCAAATTCTTAAAGATTTCAATCAGC 57.356 29.630 2.43 0.00 37.89 4.26
9722 22222 8.253113 GCCAGATCCAAATTCTTAAAGATTTCA 58.747 33.333 0.00 0.00 0.00 2.69
9723 22223 8.473219 AGCCAGATCCAAATTCTTAAAGATTTC 58.527 33.333 0.00 0.00 0.00 2.17
9724 22224 8.371571 AGCCAGATCCAAATTCTTAAAGATTT 57.628 30.769 0.00 0.00 0.00 2.17
9725 22225 7.968014 AGCCAGATCCAAATTCTTAAAGATT 57.032 32.000 0.00 0.00 0.00 2.40
9726 22226 7.069208 GGAAGCCAGATCCAAATTCTTAAAGAT 59.931 37.037 0.00 0.00 36.92 2.40
9727 22227 6.378280 GGAAGCCAGATCCAAATTCTTAAAGA 59.622 38.462 0.00 0.00 36.92 2.52
9728 22228 6.153340 TGGAAGCCAGATCCAAATTCTTAAAG 59.847 38.462 0.00 0.00 43.84 1.85
9729 22229 6.015918 TGGAAGCCAGATCCAAATTCTTAAA 58.984 36.000 0.00 0.00 43.84 1.52
9730 22230 5.579047 TGGAAGCCAGATCCAAATTCTTAA 58.421 37.500 0.00 0.00 43.84 1.85
9731 22231 5.191727 TGGAAGCCAGATCCAAATTCTTA 57.808 39.130 0.00 0.00 43.84 2.10
9732 22232 4.051661 TGGAAGCCAGATCCAAATTCTT 57.948 40.909 0.00 0.00 43.84 2.52
9733 22233 3.744940 TGGAAGCCAGATCCAAATTCT 57.255 42.857 0.00 0.00 43.84 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.