Multiple sequence alignment - TraesCS4A01G007300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G007300 chr4A 100.000 3922 0 0 1 3922 4640898 4644819 0.000000e+00 7243.0
1 TraesCS4A01G007300 chr4A 88.288 222 26 0 1 222 65467985 65468206 2.320000e-67 267.0
2 TraesCS4A01G007300 chr4B 90.782 2365 141 26 909 3237 582920131 582917808 0.000000e+00 3088.0
3 TraesCS4A01G007300 chr4B 89.329 656 41 10 236 871 582920780 582920134 0.000000e+00 797.0
4 TraesCS4A01G007300 chr4B 90.415 386 33 4 3388 3771 582841820 582841437 4.520000e-139 505.0
5 TraesCS4A01G007300 chr4D 91.736 1912 116 25 1306 3201 465900315 465898430 0.000000e+00 2617.0
6 TraesCS4A01G007300 chr4D 90.892 538 45 4 3237 3771 465898074 465897538 0.000000e+00 719.0
7 TraesCS4A01G007300 chr4D 86.348 586 40 22 236 802 465907903 465907339 1.560000e-168 603.0
8 TraesCS4A01G007300 chr4D 98.630 73 0 1 902 973 465907305 465907233 1.140000e-25 128.0
9 TraesCS4A01G007300 chr4D 95.122 41 2 0 831 871 465907343 465907303 9.100000e-07 65.8
10 TraesCS4A01G007300 chr7A 86.709 1106 138 3 998 2103 108504163 108503067 0.000000e+00 1219.0
11 TraesCS4A01G007300 chr7A 87.611 226 26 2 1 225 728179000 728178776 1.080000e-65 261.0
12 TraesCS4A01G007300 chr7A 87.611 226 26 2 1 225 728209963 728209739 1.080000e-65 261.0
13 TraesCS4A01G007300 chr7A 77.885 208 46 0 1896 2103 19151851 19151644 3.180000e-26 130.0
14 TraesCS4A01G007300 chr7D 86.484 1132 126 17 1001 2123 104187836 104188949 0.000000e+00 1218.0
15 TraesCS4A01G007300 chr7D 83.871 434 69 1 2461 2893 104211605 104212038 2.820000e-111 412.0
16 TraesCS4A01G007300 chr7D 86.937 222 29 0 1 222 364551415 364551636 2.340000e-62 250.0
17 TraesCS4A01G007300 chr7D 100.000 34 0 0 871 904 523135241 523135208 3.270000e-06 63.9
18 TraesCS4A01G007300 chr7D 92.857 42 2 1 864 904 25350008 25350049 4.230000e-05 60.2
19 TraesCS4A01G007300 chr7D 97.222 36 0 1 873 908 54923877 54923843 4.230000e-05 60.2
20 TraesCS4A01G007300 chr7B 86.259 1128 140 9 1001 2125 62466073 62467188 0.000000e+00 1210.0
21 TraesCS4A01G007300 chr7B 91.371 197 17 0 34 230 256380011 256379815 1.800000e-68 270.0
22 TraesCS4A01G007300 chr6A 91.403 221 19 0 2 222 49741931 49742151 1.770000e-78 303.0
23 TraesCS4A01G007300 chr5D 88.341 223 26 0 1 223 255864957 255865179 6.460000e-68 268.0
24 TraesCS4A01G007300 chr5D 100.000 33 0 0 872 904 478610856 478610888 1.180000e-05 62.1
25 TraesCS4A01G007300 chr6D 87.387 222 28 0 1 222 403979453 403979232 5.030000e-64 255.0
26 TraesCS4A01G007300 chr6D 86.937 222 29 0 1 222 163382992 163383213 2.340000e-62 250.0
27 TraesCS4A01G007300 chr1A 90.141 71 5 1 3777 3847 1672951 1673019 1.500000e-14 91.6
28 TraesCS4A01G007300 chrUn 100.000 35 0 0 870 904 108965769 108965803 9.100000e-07 65.8
29 TraesCS4A01G007300 chr2D 97.143 35 1 0 870 904 539171750 539171716 4.230000e-05 60.2
30 TraesCS4A01G007300 chr1D 100.000 32 0 0 873 904 97561464 97561495 4.230000e-05 60.2
31 TraesCS4A01G007300 chr1D 100.000 32 0 0 873 904 445186596 445186627 4.230000e-05 60.2
32 TraesCS4A01G007300 chr5A 100.000 30 0 0 873 902 555156746 555156775 5.470000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G007300 chr4A 4640898 4644819 3921 False 7243.0 7243 100.000000 1 3922 1 chr4A.!!$F1 3921
1 TraesCS4A01G007300 chr4B 582917808 582920780 2972 True 1942.5 3088 90.055500 236 3237 2 chr4B.!!$R2 3001
2 TraesCS4A01G007300 chr4D 465897538 465900315 2777 True 1668.0 2617 91.314000 1306 3771 2 chr4D.!!$R1 2465
3 TraesCS4A01G007300 chr4D 465907233 465907903 670 True 265.6 603 93.366667 236 973 3 chr4D.!!$R2 737
4 TraesCS4A01G007300 chr7A 108503067 108504163 1096 True 1219.0 1219 86.709000 998 2103 1 chr7A.!!$R2 1105
5 TraesCS4A01G007300 chr7D 104187836 104188949 1113 False 1218.0 1218 86.484000 1001 2123 1 chr7D.!!$F2 1122
6 TraesCS4A01G007300 chr7B 62466073 62467188 1115 False 1210.0 1210 86.259000 1001 2125 1 chr7B.!!$F1 1124

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
96 97 0.031414 ATCCCTTACCCGTACCTGCT 60.031 55.0 0.00 0.00 0.00 4.24 F
102 103 0.106519 TACCCGTACCTGCTCTACCC 60.107 60.0 0.00 0.00 0.00 3.69 F
1977 2054 0.102120 GGACAGAGATCGAGGCTGTG 59.898 60.0 18.53 15.26 42.47 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1961 2038 0.102120 GACCACAGCCTCGATCTCTG 59.898 60.000 7.04 7.04 0.00 3.35 R
2125 2202 7.063544 CGAGAAATCGATTAGAGAACAGGTTTT 59.936 37.037 11.83 0.00 34.64 2.43 R
3887 4332 0.037139 CCCGGTGACCACATACGAAA 60.037 55.000 1.11 0.00 33.46 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.913089 GACAAAGGGTAGGCACAATTTG 58.087 45.455 0.00 0.00 37.51 2.32
22 23 3.304829 ACAAAGGGTAGGCACAATTTGT 58.695 40.909 0.00 0.00 38.76 2.83
23 24 3.320826 ACAAAGGGTAGGCACAATTTGTC 59.679 43.478 0.00 0.00 39.05 3.18
24 25 2.215942 AGGGTAGGCACAATTTGTCC 57.784 50.000 0.00 4.71 0.00 4.02
25 26 0.808755 GGGTAGGCACAATTTGTCCG 59.191 55.000 0.00 0.00 0.00 4.79
26 27 1.530323 GGTAGGCACAATTTGTCCGT 58.470 50.000 0.00 0.00 0.00 4.69
27 28 2.616001 GGGTAGGCACAATTTGTCCGTA 60.616 50.000 0.00 0.00 0.00 4.02
28 29 2.417586 GGTAGGCACAATTTGTCCGTAC 59.582 50.000 12.70 12.70 0.00 3.67
29 30 2.561478 AGGCACAATTTGTCCGTACT 57.439 45.000 0.00 0.00 0.00 2.73
30 31 2.858745 AGGCACAATTTGTCCGTACTT 58.141 42.857 0.00 0.00 0.00 2.24
31 32 4.010667 AGGCACAATTTGTCCGTACTTA 57.989 40.909 0.00 0.00 0.00 2.24
32 33 4.585879 AGGCACAATTTGTCCGTACTTAT 58.414 39.130 0.00 0.00 0.00 1.73
33 34 5.007682 AGGCACAATTTGTCCGTACTTATT 58.992 37.500 0.00 0.00 0.00 1.40
34 35 6.174760 AGGCACAATTTGTCCGTACTTATTA 58.825 36.000 0.00 0.00 0.00 0.98
35 36 6.315393 AGGCACAATTTGTCCGTACTTATTAG 59.685 38.462 0.00 0.00 0.00 1.73
36 37 6.314400 GGCACAATTTGTCCGTACTTATTAGA 59.686 38.462 0.00 0.00 0.00 2.10
37 38 7.012044 GGCACAATTTGTCCGTACTTATTAGAT 59.988 37.037 0.00 0.00 0.00 1.98
38 39 8.395633 GCACAATTTGTCCGTACTTATTAGATT 58.604 33.333 0.00 0.00 0.00 2.40
59 60 8.924511 AGATTTTATCAAGGTACATGGGTATG 57.075 34.615 0.00 0.00 40.24 2.39
60 61 6.952773 TTTTATCAAGGTACATGGGTATGC 57.047 37.500 0.00 0.00 37.85 3.14
61 62 2.613026 TCAAGGTACATGGGTATGCG 57.387 50.000 0.00 0.00 37.85 4.73
62 63 1.140052 TCAAGGTACATGGGTATGCGG 59.860 52.381 0.00 0.00 37.85 5.69
63 64 0.472471 AAGGTACATGGGTATGCGGG 59.528 55.000 0.00 0.00 37.85 6.13
64 65 0.693092 AGGTACATGGGTATGCGGGT 60.693 55.000 0.00 0.00 37.85 5.28
65 66 1.050204 GGTACATGGGTATGCGGGTA 58.950 55.000 0.00 0.00 37.85 3.69
66 67 1.270465 GGTACATGGGTATGCGGGTAC 60.270 57.143 0.00 0.00 37.85 3.34
67 68 0.675083 TACATGGGTATGCGGGTACG 59.325 55.000 0.00 0.00 44.63 3.67
68 69 1.301401 CATGGGTATGCGGGTACGG 60.301 63.158 0.00 0.00 41.36 4.02
69 70 2.513259 ATGGGTATGCGGGTACGGG 61.513 63.158 0.00 0.00 41.36 5.28
70 71 3.156556 GGGTATGCGGGTACGGGT 61.157 66.667 0.00 0.00 41.36 5.28
71 72 2.734720 GGGTATGCGGGTACGGGTT 61.735 63.158 0.00 0.00 41.36 4.11
72 73 1.398958 GGGTATGCGGGTACGGGTTA 61.399 60.000 0.00 0.00 41.36 2.85
73 74 0.681175 GGTATGCGGGTACGGGTTAT 59.319 55.000 0.00 0.00 41.36 1.89
74 75 1.892474 GGTATGCGGGTACGGGTTATA 59.108 52.381 0.00 0.00 41.36 0.98
75 76 2.497273 GGTATGCGGGTACGGGTTATAT 59.503 50.000 0.00 0.00 41.36 0.86
76 77 2.754946 ATGCGGGTACGGGTTATATG 57.245 50.000 0.00 0.00 41.36 1.78
77 78 1.702182 TGCGGGTACGGGTTATATGA 58.298 50.000 0.00 0.00 41.36 2.15
78 79 2.250031 TGCGGGTACGGGTTATATGAT 58.750 47.619 0.00 0.00 41.36 2.45
79 80 2.231964 TGCGGGTACGGGTTATATGATC 59.768 50.000 0.00 0.00 41.36 2.92
80 81 2.417787 GCGGGTACGGGTTATATGATCC 60.418 54.545 0.00 0.00 41.36 3.36
81 82 2.167075 CGGGTACGGGTTATATGATCCC 59.833 54.545 0.00 0.00 37.98 3.85
82 83 3.447950 GGGTACGGGTTATATGATCCCT 58.552 50.000 9.09 0.00 39.10 4.20
83 84 3.842436 GGGTACGGGTTATATGATCCCTT 59.158 47.826 9.09 4.02 39.10 3.95
84 85 5.025453 GGGTACGGGTTATATGATCCCTTA 58.975 45.833 9.09 3.28 39.10 2.69
85 86 5.105187 GGGTACGGGTTATATGATCCCTTAC 60.105 48.000 14.28 14.28 42.00 2.34
86 87 5.970592 GTACGGGTTATATGATCCCTTACC 58.029 45.833 12.81 0.00 39.01 2.85
87 88 3.842436 ACGGGTTATATGATCCCTTACCC 59.158 47.826 0.00 0.00 40.24 3.69
88 89 4.482952 GGGTTATATGATCCCTTACCCG 57.517 50.000 0.00 0.00 38.29 5.28
89 90 3.842436 GGGTTATATGATCCCTTACCCGT 59.158 47.826 0.00 0.00 38.29 5.28
90 91 5.025453 GGGTTATATGATCCCTTACCCGTA 58.975 45.833 0.00 0.00 38.29 4.02
91 92 5.105187 GGGTTATATGATCCCTTACCCGTAC 60.105 48.000 0.00 0.00 38.29 3.67
92 93 5.105187 GGTTATATGATCCCTTACCCGTACC 60.105 48.000 0.00 0.00 0.00 3.34
93 94 2.789323 ATGATCCCTTACCCGTACCT 57.211 50.000 0.00 0.00 0.00 3.08
94 95 1.784358 TGATCCCTTACCCGTACCTG 58.216 55.000 0.00 0.00 0.00 4.00
95 96 0.391966 GATCCCTTACCCGTACCTGC 59.608 60.000 0.00 0.00 0.00 4.85
96 97 0.031414 ATCCCTTACCCGTACCTGCT 60.031 55.000 0.00 0.00 0.00 4.24
97 98 0.685458 TCCCTTACCCGTACCTGCTC 60.685 60.000 0.00 0.00 0.00 4.26
98 99 0.686769 CCCTTACCCGTACCTGCTCT 60.687 60.000 0.00 0.00 0.00 4.09
99 100 1.410648 CCCTTACCCGTACCTGCTCTA 60.411 57.143 0.00 0.00 0.00 2.43
100 101 1.680207 CCTTACCCGTACCTGCTCTAC 59.320 57.143 0.00 0.00 0.00 2.59
101 102 1.680207 CTTACCCGTACCTGCTCTACC 59.320 57.143 0.00 0.00 0.00 3.18
102 103 0.106519 TACCCGTACCTGCTCTACCC 60.107 60.000 0.00 0.00 0.00 3.69
103 104 2.487532 CCCGTACCTGCTCTACCCG 61.488 68.421 0.00 0.00 0.00 5.28
104 105 1.452651 CCGTACCTGCTCTACCCGA 60.453 63.158 0.00 0.00 0.00 5.14
105 106 0.822532 CCGTACCTGCTCTACCCGAT 60.823 60.000 0.00 0.00 0.00 4.18
106 107 0.311165 CGTACCTGCTCTACCCGATG 59.689 60.000 0.00 0.00 0.00 3.84
107 108 0.674534 GTACCTGCTCTACCCGATGG 59.325 60.000 0.00 0.00 37.80 3.51
120 121 2.097036 CCCGATGGGTTTAAGGTTTCC 58.903 52.381 0.00 0.00 38.25 3.13
121 122 2.097036 CCGATGGGTTTAAGGTTTCCC 58.903 52.381 0.00 0.00 40.26 3.97
122 123 2.097036 CGATGGGTTTAAGGTTTCCCC 58.903 52.381 0.00 0.00 39.20 4.81
125 126 3.639625 TGGGTTTAAGGTTTCCCCATT 57.360 42.857 0.00 0.00 40.41 3.16
126 127 3.942926 TGGGTTTAAGGTTTCCCCATTT 58.057 40.909 0.00 0.00 40.41 2.32
127 128 5.089249 TGGGTTTAAGGTTTCCCCATTTA 57.911 39.130 0.00 0.00 40.41 1.40
128 129 5.666738 TGGGTTTAAGGTTTCCCCATTTAT 58.333 37.500 0.00 0.00 40.41 1.40
129 130 6.812649 TGGGTTTAAGGTTTCCCCATTTATA 58.187 36.000 0.00 0.00 40.41 0.98
130 131 7.431682 TGGGTTTAAGGTTTCCCCATTTATAT 58.568 34.615 0.00 0.00 40.41 0.86
131 132 8.575733 TGGGTTTAAGGTTTCCCCATTTATATA 58.424 33.333 0.00 0.00 40.41 0.86
132 133 8.863086 GGGTTTAAGGTTTCCCCATTTATATAC 58.137 37.037 0.00 0.00 35.32 1.47
133 134 8.863086 GGTTTAAGGTTTCCCCATTTATATACC 58.137 37.037 0.00 0.00 34.66 2.73
134 135 8.863086 GTTTAAGGTTTCCCCATTTATATACCC 58.137 37.037 0.00 0.00 34.66 3.69
135 136 6.615677 AAGGTTTCCCCATTTATATACCCA 57.384 37.500 0.00 0.00 34.66 4.51
136 137 6.813724 AGGTTTCCCCATTTATATACCCAT 57.186 37.500 0.00 0.00 34.66 4.00
137 138 7.915209 AGGTTTCCCCATTTATATACCCATA 57.085 36.000 0.00 0.00 34.66 2.74
138 139 7.939781 AGGTTTCCCCATTTATATACCCATAG 58.060 38.462 0.00 0.00 34.66 2.23
139 140 7.036132 AGGTTTCCCCATTTATATACCCATAGG 60.036 40.741 0.00 0.00 35.49 2.57
154 155 4.668636 CCCATAGGTAAGTTTTTGTCCCA 58.331 43.478 0.00 0.00 0.00 4.37
155 156 4.461431 CCCATAGGTAAGTTTTTGTCCCAC 59.539 45.833 0.00 0.00 0.00 4.61
156 157 5.074115 CCATAGGTAAGTTTTTGTCCCACA 58.926 41.667 0.00 0.00 0.00 4.17
157 158 5.048294 CCATAGGTAAGTTTTTGTCCCACAC 60.048 44.000 0.00 0.00 0.00 3.82
158 159 3.293337 AGGTAAGTTTTTGTCCCACACC 58.707 45.455 0.00 0.00 0.00 4.16
159 160 2.363038 GGTAAGTTTTTGTCCCACACCC 59.637 50.000 0.00 0.00 0.00 4.61
160 161 2.543037 AAGTTTTTGTCCCACACCCT 57.457 45.000 0.00 0.00 0.00 4.34
161 162 2.543037 AGTTTTTGTCCCACACCCTT 57.457 45.000 0.00 0.00 0.00 3.95
162 163 2.107366 AGTTTTTGTCCCACACCCTTG 58.893 47.619 0.00 0.00 0.00 3.61
163 164 0.827368 TTTTTGTCCCACACCCTTGC 59.173 50.000 0.00 0.00 0.00 4.01
164 165 1.045911 TTTTGTCCCACACCCTTGCC 61.046 55.000 0.00 0.00 0.00 4.52
165 166 2.937959 TTTGTCCCACACCCTTGCCC 62.938 60.000 0.00 0.00 0.00 5.36
166 167 3.580319 GTCCCACACCCTTGCCCT 61.580 66.667 0.00 0.00 0.00 5.19
167 168 2.208640 TCCCACACCCTTGCCCTA 59.791 61.111 0.00 0.00 0.00 3.53
168 169 1.464395 TCCCACACCCTTGCCCTAA 60.464 57.895 0.00 0.00 0.00 2.69
169 170 0.849094 TCCCACACCCTTGCCCTAAT 60.849 55.000 0.00 0.00 0.00 1.73
170 171 0.923358 CCCACACCCTTGCCCTAATA 59.077 55.000 0.00 0.00 0.00 0.98
171 172 1.133792 CCCACACCCTTGCCCTAATAG 60.134 57.143 0.00 0.00 0.00 1.73
172 173 1.133792 CCACACCCTTGCCCTAATAGG 60.134 57.143 0.00 0.00 34.30 2.57
201 202 1.593196 CGCAGGGTACATGGGTAATG 58.407 55.000 0.00 0.00 42.48 1.90
202 203 1.813862 CGCAGGGTACATGGGTAATGG 60.814 57.143 0.00 0.00 40.94 3.16
203 204 1.478654 GCAGGGTACATGGGTAATGGG 60.479 57.143 0.00 0.00 40.94 4.00
204 205 1.850345 CAGGGTACATGGGTAATGGGT 59.150 52.381 0.00 0.00 40.94 4.51
205 206 3.050089 CAGGGTACATGGGTAATGGGTA 58.950 50.000 0.00 0.00 40.94 3.69
206 207 3.050835 AGGGTACATGGGTAATGGGTAC 58.949 50.000 0.00 0.00 40.94 3.34
222 223 3.487120 GGTACCCATTGACATCCCTAC 57.513 52.381 0.00 0.00 0.00 3.18
223 224 3.046374 GGTACCCATTGACATCCCTACT 58.954 50.000 0.00 0.00 0.00 2.57
224 225 3.458487 GGTACCCATTGACATCCCTACTT 59.542 47.826 0.00 0.00 0.00 2.24
225 226 3.933861 ACCCATTGACATCCCTACTTC 57.066 47.619 0.00 0.00 0.00 3.01
226 227 2.170607 ACCCATTGACATCCCTACTTCG 59.829 50.000 0.00 0.00 0.00 3.79
227 228 2.485479 CCCATTGACATCCCTACTTCGG 60.485 54.545 0.00 0.00 0.00 4.30
228 229 2.434336 CCATTGACATCCCTACTTCGGA 59.566 50.000 0.00 0.00 0.00 4.55
229 230 3.458189 CATTGACATCCCTACTTCGGAC 58.542 50.000 0.00 0.00 30.39 4.79
230 231 2.225382 TGACATCCCTACTTCGGACA 57.775 50.000 0.00 0.00 30.39 4.02
231 232 1.822990 TGACATCCCTACTTCGGACAC 59.177 52.381 0.00 0.00 30.39 3.67
232 233 2.100989 GACATCCCTACTTCGGACACT 58.899 52.381 0.00 0.00 30.39 3.55
233 234 2.099427 GACATCCCTACTTCGGACACTC 59.901 54.545 0.00 0.00 30.39 3.51
234 235 2.291670 ACATCCCTACTTCGGACACTCT 60.292 50.000 0.00 0.00 30.39 3.24
251 252 0.548031 TCTTATGGCCAGCTTGGAGG 59.452 55.000 13.05 0.00 40.96 4.30
258 259 2.227036 CCAGCTTGGAGGAGGGTGT 61.227 63.158 0.00 0.00 40.96 4.16
265 266 2.607750 GAGGAGGGTGTGGGAGCA 60.608 66.667 0.00 0.00 0.00 4.26
280 281 3.390639 TGGGAGCAAACACATTGGAATTT 59.609 39.130 0.00 0.00 39.54 1.82
281 282 3.747529 GGGAGCAAACACATTGGAATTTG 59.252 43.478 0.00 5.60 39.54 2.32
298 299 0.703488 TTGTGCAGGGGATCCAATGA 59.297 50.000 15.23 0.00 34.83 2.57
317 318 3.426568 GCAGAGGGCGTTCACTGC 61.427 66.667 11.79 11.79 46.25 4.40
328 329 1.419374 GTTCACTGCGAGTCACGAAT 58.581 50.000 0.00 0.00 45.77 3.34
332 333 2.869801 TCACTGCGAGTCACGAATTTTT 59.130 40.909 0.00 0.00 45.77 1.94
333 334 2.966708 CACTGCGAGTCACGAATTTTTG 59.033 45.455 0.00 0.00 45.77 2.44
334 335 2.869801 ACTGCGAGTCACGAATTTTTGA 59.130 40.909 0.00 0.00 45.77 2.69
335 336 3.218398 CTGCGAGTCACGAATTTTTGAC 58.782 45.455 10.85 10.85 45.77 3.18
337 338 3.249799 TGCGAGTCACGAATTTTTGACAT 59.750 39.130 17.83 7.27 43.94 3.06
339 340 5.050023 TGCGAGTCACGAATTTTTGACATTA 60.050 36.000 17.83 4.09 43.94 1.90
385 400 1.948834 TGCTGCATTGATGGTTATCGG 59.051 47.619 0.00 0.00 36.04 4.18
393 408 6.096141 TGCATTGATGGTTATCGGTGTTAATT 59.904 34.615 0.00 0.00 36.04 1.40
408 423 5.573669 GGTGTTAATTGTTTCACGTTTGTGT 59.426 36.000 0.00 0.00 46.49 3.72
424 439 9.393249 CACGTTTGTGTCATCAATTACTTAATT 57.607 29.630 0.00 0.00 41.34 1.40
459 480 5.809373 TTTAACCGATTTTAAGCAAACGC 57.191 34.783 0.00 0.00 0.00 4.84
567 588 8.635328 TCTTCATTCTAACGTTACCATAGCATA 58.365 33.333 3.29 0.00 0.00 3.14
592 613 1.066430 TCCGTAAGATGCCAACCTGTC 60.066 52.381 0.00 0.00 43.02 3.51
617 639 0.247736 AGTCGAGGTGTGGCATTCTC 59.752 55.000 0.00 0.00 0.00 2.87
680 702 1.168714 AAGACGATGGCTTGCTTTCC 58.831 50.000 0.00 0.00 0.00 3.13
708 730 3.673338 TCAACTCGATCGTCATTGACAAC 59.327 43.478 15.94 6.27 32.09 3.32
718 740 5.402398 TCGTCATTGACAACTCTGATACAG 58.598 41.667 16.61 0.00 32.09 2.74
726 748 4.825422 ACAACTCTGATACAGTCATGTGG 58.175 43.478 0.00 0.00 40.79 4.17
798 820 3.774616 GGATAACCCCGACCTCAAC 57.225 57.895 0.00 0.00 0.00 3.18
799 821 0.906775 GGATAACCCCGACCTCAACA 59.093 55.000 0.00 0.00 0.00 3.33
800 822 1.279846 GGATAACCCCGACCTCAACAA 59.720 52.381 0.00 0.00 0.00 2.83
801 823 2.092592 GGATAACCCCGACCTCAACAAT 60.093 50.000 0.00 0.00 0.00 2.71
802 824 2.483014 TAACCCCGACCTCAACAATG 57.517 50.000 0.00 0.00 0.00 2.82
803 825 0.893727 AACCCCGACCTCAACAATGC 60.894 55.000 0.00 0.00 0.00 3.56
804 826 1.002134 CCCCGACCTCAACAATGCT 60.002 57.895 0.00 0.00 0.00 3.79
805 827 1.308069 CCCCGACCTCAACAATGCTG 61.308 60.000 0.00 0.00 0.00 4.41
806 828 1.308069 CCCGACCTCAACAATGCTGG 61.308 60.000 0.00 0.00 0.00 4.85
807 829 1.503542 CGACCTCAACAATGCTGGC 59.496 57.895 0.00 0.00 0.00 4.85
808 830 1.885871 GACCTCAACAATGCTGGCC 59.114 57.895 0.00 0.00 0.00 5.36
809 831 0.895100 GACCTCAACAATGCTGGCCA 60.895 55.000 4.71 4.71 0.00 5.36
810 832 0.896940 ACCTCAACAATGCTGGCCAG 60.897 55.000 29.34 29.34 0.00 4.85
821 843 3.241530 TGGCCAGCCAGAAGACGT 61.242 61.111 7.43 0.00 41.89 4.34
822 844 2.032681 GGCCAGCCAGAAGACGTT 59.967 61.111 3.12 0.00 35.81 3.99
823 845 2.035442 GGCCAGCCAGAAGACGTTC 61.035 63.158 3.12 0.00 35.81 3.95
824 846 1.301716 GCCAGCCAGAAGACGTTCA 60.302 57.895 0.00 0.00 34.82 3.18
825 847 1.569479 GCCAGCCAGAAGACGTTCAC 61.569 60.000 0.00 0.00 34.82 3.18
826 848 0.249868 CCAGCCAGAAGACGTTCACA 60.250 55.000 0.00 0.00 34.82 3.58
827 849 1.581934 CAGCCAGAAGACGTTCACAA 58.418 50.000 0.00 0.00 34.82 3.33
828 850 2.146342 CAGCCAGAAGACGTTCACAAT 58.854 47.619 0.00 0.00 34.82 2.71
829 851 2.549754 CAGCCAGAAGACGTTCACAATT 59.450 45.455 0.00 0.00 34.82 2.32
830 852 3.745975 CAGCCAGAAGACGTTCACAATTA 59.254 43.478 0.00 0.00 34.82 1.40
858 912 1.375013 TTCGCGTCTGGGTAAAGCC 60.375 57.895 5.77 0.00 0.00 4.35
883 937 8.179148 CATCGATGGATAAAGAGTAATGCTAC 57.821 38.462 17.96 0.00 0.00 3.58
884 938 7.284919 TCGATGGATAAAGAGTAATGCTACA 57.715 36.000 0.00 0.00 0.00 2.74
885 939 7.896811 TCGATGGATAAAGAGTAATGCTACAT 58.103 34.615 0.00 0.00 0.00 2.29
886 940 8.029522 TCGATGGATAAAGAGTAATGCTACATC 58.970 37.037 0.00 0.00 0.00 3.06
887 941 8.031864 CGATGGATAAAGAGTAATGCTACATCT 58.968 37.037 0.00 0.00 0.00 2.90
890 944 9.143155 TGGATAAAGAGTAATGCTACATCTACA 57.857 33.333 0.00 0.00 0.00 2.74
891 945 9.982651 GGATAAAGAGTAATGCTACATCTACAA 57.017 33.333 0.00 0.00 0.00 2.41
894 948 8.723942 AAAGAGTAATGCTACATCTACAAAGG 57.276 34.615 0.00 0.00 0.00 3.11
895 949 7.425224 AGAGTAATGCTACATCTACAAAGGT 57.575 36.000 0.00 0.00 0.00 3.50
896 950 7.852263 AGAGTAATGCTACATCTACAAAGGTT 58.148 34.615 0.00 0.00 0.00 3.50
897 951 8.322091 AGAGTAATGCTACATCTACAAAGGTTT 58.678 33.333 0.00 0.00 0.00 3.27
898 952 9.595823 GAGTAATGCTACATCTACAAAGGTTTA 57.404 33.333 0.00 0.00 0.00 2.01
899 953 9.379791 AGTAATGCTACATCTACAAAGGTTTAC 57.620 33.333 0.00 0.00 0.00 2.01
900 954 9.379791 GTAATGCTACATCTACAAAGGTTTACT 57.620 33.333 0.00 0.00 0.00 2.24
901 955 8.863872 AATGCTACATCTACAAAGGTTTACTT 57.136 30.769 0.00 0.00 42.52 2.24
902 956 9.953565 AATGCTACATCTACAAAGGTTTACTTA 57.046 29.630 0.00 0.00 38.85 2.24
903 957 9.953565 ATGCTACATCTACAAAGGTTTACTTAA 57.046 29.630 0.00 0.00 38.85 1.85
989 1043 3.826637 GCAAGTAGCAAGTCCGGTA 57.173 52.632 0.00 0.00 44.79 4.02
990 1044 1.356938 GCAAGTAGCAAGTCCGGTAC 58.643 55.000 0.00 0.00 44.79 3.34
1039 1099 1.817099 CTGCTTCCCATGACGCTCC 60.817 63.158 0.00 0.00 36.74 4.70
1377 1445 3.458163 CTTCGCCTCTACGCCCCA 61.458 66.667 0.00 0.00 0.00 4.96
1419 1487 4.099170 CTCGTCGCGGACCTTCGT 62.099 66.667 6.13 0.00 0.00 3.85
1438 1512 2.470821 GTGAACAGTGCACGTCTAAGT 58.529 47.619 12.01 1.87 0.00 2.24
1439 1513 2.471743 GTGAACAGTGCACGTCTAAGTC 59.528 50.000 12.01 7.24 0.00 3.01
1977 2054 0.102120 GGACAGAGATCGAGGCTGTG 59.898 60.000 18.53 15.26 42.47 3.66
2125 2202 8.833493 GCAAGTAACTACTTTCCAGTTCTAAAA 58.167 33.333 0.00 0.00 43.57 1.52
2292 2371 9.118300 CCAGAATGAAGTCTTTATGCTCTTATT 57.882 33.333 0.00 0.00 39.69 1.40
2345 2424 9.995003 TTTTGCATAAGATAGGTGAAAATTGTT 57.005 25.926 0.00 0.00 0.00 2.83
2461 2541 8.035394 AGTATAAGTCAAGGTCACACATACTTG 58.965 37.037 0.00 0.00 41.14 3.16
2472 2552 9.167311 AGGTCACACATACTTGATATTTTCTTC 57.833 33.333 0.00 0.00 0.00 2.87
2501 2581 3.310860 GATGCCCGAGGACCACGTT 62.311 63.158 10.51 0.00 0.00 3.99
2515 2595 1.671054 ACGTTGTTCTGGATGGCCG 60.671 57.895 0.00 0.00 36.79 6.13
2556 2636 0.532862 CGTGCAGTTCCAGTTGGAGT 60.533 55.000 0.51 0.00 46.36 3.85
2741 2821 2.456119 GGGTGTCGCGATGCTTCAG 61.456 63.158 14.06 0.00 0.00 3.02
2742 2822 1.738099 GGTGTCGCGATGCTTCAGT 60.738 57.895 14.06 0.00 0.00 3.41
2848 2929 4.984785 TGTCGAGTTCTTGAACTTCATGAG 59.015 41.667 15.94 5.88 33.06 2.90
2855 2936 0.389817 TGAACTTCATGAGACGGCCG 60.390 55.000 26.86 26.86 0.00 6.13
2896 2977 1.923148 ACTGAATAAGGGGGTTGGAGG 59.077 52.381 0.00 0.00 0.00 4.30
2952 3033 4.658901 TGGAGACAAGTCCTAAGAAACCTT 59.341 41.667 0.00 0.00 37.52 3.50
3009 3092 2.683211 ACATTCAGGGGTTTTCTGCT 57.317 45.000 0.00 0.00 32.63 4.24
3130 3216 2.368439 TGGCACAAAGGCTCATGTATC 58.632 47.619 5.68 3.02 44.55 2.24
3131 3217 2.290832 TGGCACAAAGGCTCATGTATCA 60.291 45.455 5.68 5.14 44.55 2.15
3135 3240 5.059161 GCACAAAGGCTCATGTATCATAGA 58.941 41.667 5.68 0.00 0.00 1.98
3150 3255 5.732331 ATCATAGAGGGGAAATTGGACAA 57.268 39.130 0.00 0.00 0.00 3.18
3166 3271 1.344763 GACAAGTCTAGGTGGTGCACT 59.655 52.381 17.98 0.00 34.40 4.40
3184 3289 3.500680 GCACTCGCTCTAGCTAGAACTAT 59.499 47.826 23.37 6.64 37.30 2.12
3188 3293 5.246656 ACTCGCTCTAGCTAGAACTATAGGA 59.753 44.000 23.37 10.76 37.30 2.94
3215 3321 2.152016 CTTTCCGACAACCCTCCTTTC 58.848 52.381 0.00 0.00 0.00 2.62
3227 3333 5.552430 ACCCTCCTTTCCCTAAATTGAAT 57.448 39.130 0.00 0.00 0.00 2.57
3244 3686 2.764637 AATGGGTGTCGGGACCTTGC 62.765 60.000 4.09 0.00 36.14 4.01
3249 3691 2.266055 GTCGGGACCTTGCTGGAG 59.734 66.667 3.40 0.00 39.71 3.86
3259 3701 1.587043 CTTGCTGGAGACGAGGACGA 61.587 60.000 0.00 0.00 42.66 4.20
3260 3702 0.965866 TTGCTGGAGACGAGGACGAT 60.966 55.000 0.00 0.00 42.66 3.73
3262 3704 1.658686 GCTGGAGACGAGGACGATGT 61.659 60.000 0.00 0.00 42.66 3.06
3274 3716 1.601903 GGACGATGTTGTGAGTTGCAA 59.398 47.619 0.00 0.00 0.00 4.08
3284 3726 1.270550 GTGAGTTGCAACATCCCAAGG 59.729 52.381 30.11 0.00 0.00 3.61
3309 3751 4.380986 AGGGATCTGCCGTCATCA 57.619 55.556 0.00 0.00 37.63 3.07
3324 3766 4.497340 CCGTCATCAGAGAAGAACTAGAGC 60.497 50.000 0.00 0.00 0.00 4.09
3330 3772 0.041386 AGAAGAACTAGAGCGGGGGT 59.959 55.000 0.00 0.00 0.00 4.95
3340 3782 2.512974 GCGGGGGTTACGATGGTG 60.513 66.667 0.00 0.00 0.00 4.17
3361 3804 1.898574 GGCTTGGGCATATCGTGGG 60.899 63.158 0.00 0.00 40.87 4.61
3363 3806 0.751643 GCTTGGGCATATCGTGGGTT 60.752 55.000 0.00 0.00 38.54 4.11
3394 3837 4.318404 CGAGCGGAAGAAGAATAAAGATGC 60.318 45.833 0.00 0.00 0.00 3.91
3440 3884 4.360889 TCCAATGGCCACCTAATCAAATT 58.639 39.130 8.16 0.00 0.00 1.82
3461 3905 5.957842 TTATGATGGAAGCGTTTTCAGTT 57.042 34.783 0.00 0.00 0.00 3.16
3516 3960 2.804572 CGATCAACCCTGATTCGAGCAT 60.805 50.000 0.00 0.00 42.60 3.79
3522 3966 2.700371 ACCCTGATTCGAGCATACATGA 59.300 45.455 0.00 0.00 0.00 3.07
3529 3973 6.748132 TGATTCGAGCATACATGAGTGATTA 58.252 36.000 0.00 0.00 0.00 1.75
3532 3976 7.643528 TTCGAGCATACATGAGTGATTATTC 57.356 36.000 0.00 0.00 0.00 1.75
3534 3978 7.087007 TCGAGCATACATGAGTGATTATTCTC 58.913 38.462 0.00 0.00 0.00 2.87
3536 3980 6.162079 AGCATACATGAGTGATTATTCTCGG 58.838 40.000 0.00 0.00 33.88 4.63
3546 3990 4.809426 GTGATTATTCTCGGTACTTGGTGG 59.191 45.833 0.00 0.00 0.00 4.61
3578 4022 4.210331 GCACAATGAAGGTATGGAAGGAT 58.790 43.478 0.00 0.00 0.00 3.24
3581 4025 6.016777 GCACAATGAAGGTATGGAAGGATAAG 60.017 42.308 0.00 0.00 0.00 1.73
3673 4118 6.706295 TGATGGTTTTCAAACTTCCAAAACT 58.294 32.000 2.55 0.00 39.15 2.66
3729 4174 1.153229 GGTGGGGCGATGGAGTAAC 60.153 63.158 0.00 0.00 0.00 2.50
3731 4176 0.743345 GTGGGGCGATGGAGTAACAC 60.743 60.000 0.00 0.00 0.00 3.32
3732 4177 0.907704 TGGGGCGATGGAGTAACACT 60.908 55.000 0.00 0.00 0.00 3.55
3736 4181 2.614481 GGGCGATGGAGTAACACTGAAA 60.614 50.000 0.00 0.00 0.00 2.69
3761 4206 1.969923 CATTGGAAGGCTTGGTGGAAA 59.030 47.619 3.46 0.00 0.00 3.13
3764 4209 3.534357 TGGAAGGCTTGGTGGAAATTA 57.466 42.857 3.46 0.00 0.00 1.40
3766 4211 4.023291 TGGAAGGCTTGGTGGAAATTATC 58.977 43.478 3.46 0.00 0.00 1.75
3771 4216 7.890655 GGAAGGCTTGGTGGAAATTATCTATAT 59.109 37.037 3.46 0.00 0.00 0.86
3772 4217 9.959721 GAAGGCTTGGTGGAAATTATCTATATA 57.040 33.333 3.46 0.00 0.00 0.86
3820 4265 9.833917 ACCTACTAATAAAAGGACTATTGCTTC 57.166 33.333 0.00 0.00 30.89 3.86
3827 4272 9.700831 AATAAAAGGACTATTGCTTCTTACCAT 57.299 29.630 0.00 0.00 30.89 3.55
3828 4273 7.631717 AAAAGGACTATTGCTTCTTACCATC 57.368 36.000 0.00 0.00 30.89 3.51
3829 4274 5.957771 AGGACTATTGCTTCTTACCATCA 57.042 39.130 0.00 0.00 0.00 3.07
3830 4275 6.506538 AGGACTATTGCTTCTTACCATCAT 57.493 37.500 0.00 0.00 0.00 2.45
3831 4276 7.618019 AGGACTATTGCTTCTTACCATCATA 57.382 36.000 0.00 0.00 0.00 2.15
3832 4277 8.034313 AGGACTATTGCTTCTTACCATCATAA 57.966 34.615 0.00 0.00 0.00 1.90
3833 4278 8.153550 AGGACTATTGCTTCTTACCATCATAAG 58.846 37.037 0.00 0.00 34.06 1.73
3834 4279 7.934120 GGACTATTGCTTCTTACCATCATAAGT 59.066 37.037 0.00 0.00 34.36 2.24
3835 4280 9.331282 GACTATTGCTTCTTACCATCATAAGTT 57.669 33.333 0.00 0.00 34.36 2.66
3836 4281 9.331282 ACTATTGCTTCTTACCATCATAAGTTC 57.669 33.333 0.00 0.00 34.36 3.01
3837 4282 6.662414 TTGCTTCTTACCATCATAAGTTCG 57.338 37.500 0.00 0.00 34.36 3.95
3838 4283 5.730550 TGCTTCTTACCATCATAAGTTCGT 58.269 37.500 0.00 0.00 34.36 3.85
3839 4284 5.810587 TGCTTCTTACCATCATAAGTTCGTC 59.189 40.000 0.00 0.00 34.36 4.20
3840 4285 5.234543 GCTTCTTACCATCATAAGTTCGTCC 59.765 44.000 0.00 0.00 34.36 4.79
3841 4286 4.928601 TCTTACCATCATAAGTTCGTCCG 58.071 43.478 0.00 0.00 34.36 4.79
3842 4287 4.400251 TCTTACCATCATAAGTTCGTCCGT 59.600 41.667 0.00 0.00 34.36 4.69
3843 4288 3.604875 ACCATCATAAGTTCGTCCGTT 57.395 42.857 0.00 0.00 0.00 4.44
3844 4289 3.934068 ACCATCATAAGTTCGTCCGTTT 58.066 40.909 0.00 0.00 0.00 3.60
3845 4290 4.320870 ACCATCATAAGTTCGTCCGTTTT 58.679 39.130 0.00 0.00 0.00 2.43
3846 4291 4.758165 ACCATCATAAGTTCGTCCGTTTTT 59.242 37.500 0.00 0.00 0.00 1.94
3847 4292 5.086058 CCATCATAAGTTCGTCCGTTTTTG 58.914 41.667 0.00 0.00 0.00 2.44
3848 4293 4.735662 TCATAAGTTCGTCCGTTTTTGG 57.264 40.909 0.00 0.00 0.00 3.28
3849 4294 4.128643 TCATAAGTTCGTCCGTTTTTGGT 58.871 39.130 0.00 0.00 0.00 3.67
3850 4295 4.575645 TCATAAGTTCGTCCGTTTTTGGTT 59.424 37.500 0.00 0.00 0.00 3.67
3851 4296 3.409851 AAGTTCGTCCGTTTTTGGTTC 57.590 42.857 0.00 0.00 0.00 3.62
3852 4297 1.672363 AGTTCGTCCGTTTTTGGTTCC 59.328 47.619 0.00 0.00 0.00 3.62
3853 4298 1.401199 GTTCGTCCGTTTTTGGTTCCA 59.599 47.619 0.00 0.00 0.00 3.53
3854 4299 1.015868 TCGTCCGTTTTTGGTTCCAC 58.984 50.000 0.00 0.00 0.00 4.02
3855 4300 0.029700 CGTCCGTTTTTGGTTCCACC 59.970 55.000 0.00 0.00 39.22 4.61
3856 4301 0.029700 GTCCGTTTTTGGTTCCACCG 59.970 55.000 0.00 0.00 42.58 4.94
3857 4302 0.394080 TCCGTTTTTGGTTCCACCGT 60.394 50.000 0.00 0.00 42.58 4.83
3858 4303 0.029700 CCGTTTTTGGTTCCACCGTC 59.970 55.000 0.00 0.00 42.58 4.79
3859 4304 0.733729 CGTTTTTGGTTCCACCGTCA 59.266 50.000 0.00 0.00 42.58 4.35
3860 4305 1.132643 CGTTTTTGGTTCCACCGTCAA 59.867 47.619 0.00 0.00 42.58 3.18
3861 4306 2.415625 CGTTTTTGGTTCCACCGTCAAA 60.416 45.455 0.00 0.00 42.58 2.69
3862 4307 3.735514 CGTTTTTGGTTCCACCGTCAAAT 60.736 43.478 0.00 0.00 42.58 2.32
3863 4308 4.185394 GTTTTTGGTTCCACCGTCAAATT 58.815 39.130 0.00 0.00 42.58 1.82
3864 4309 4.473477 TTTTGGTTCCACCGTCAAATTT 57.527 36.364 0.00 0.00 42.58 1.82
3865 4310 3.719173 TTGGTTCCACCGTCAAATTTC 57.281 42.857 0.00 0.00 42.58 2.17
3866 4311 1.604755 TGGTTCCACCGTCAAATTTCG 59.395 47.619 0.00 0.00 42.58 3.46
3867 4312 1.605232 GGTTCCACCGTCAAATTTCGT 59.395 47.619 0.00 0.00 0.00 3.85
3868 4313 2.033675 GGTTCCACCGTCAAATTTCGTT 59.966 45.455 0.00 0.00 0.00 3.85
3869 4314 3.489568 GGTTCCACCGTCAAATTTCGTTT 60.490 43.478 0.00 0.00 0.00 3.60
3870 4315 3.612472 TCCACCGTCAAATTTCGTTTC 57.388 42.857 0.00 0.00 0.00 2.78
3871 4316 2.032722 TCCACCGTCAAATTTCGTTTCG 60.033 45.455 0.00 0.00 0.00 3.46
3872 4317 2.286536 CCACCGTCAAATTTCGTTTCGT 60.287 45.455 0.00 0.00 0.00 3.85
3873 4318 3.059733 CCACCGTCAAATTTCGTTTCGTA 60.060 43.478 0.00 0.00 0.00 3.43
3874 4319 4.138817 CACCGTCAAATTTCGTTTCGTAG 58.861 43.478 0.00 0.00 0.00 3.51
3875 4320 3.184986 ACCGTCAAATTTCGTTTCGTAGG 59.815 43.478 0.00 0.00 0.00 3.18
3876 4321 3.184986 CCGTCAAATTTCGTTTCGTAGGT 59.815 43.478 0.00 0.00 0.00 3.08
3877 4322 4.380290 CGTCAAATTTCGTTTCGTAGGTC 58.620 43.478 0.00 0.00 0.00 3.85
3878 4323 4.380290 GTCAAATTTCGTTTCGTAGGTCG 58.620 43.478 0.00 0.00 41.41 4.79
3879 4324 4.050553 TCAAATTTCGTTTCGTAGGTCGT 58.949 39.130 0.00 0.00 40.80 4.34
3880 4325 4.148696 TCAAATTTCGTTTCGTAGGTCGTC 59.851 41.667 0.00 0.00 40.80 4.20
3881 4326 2.050477 TTTCGTTTCGTAGGTCGTCC 57.950 50.000 0.00 0.00 40.80 4.79
3883 4328 0.798776 TCGTTTCGTAGGTCGTCCTC 59.201 55.000 3.91 0.00 43.94 3.71
3884 4329 0.518636 CGTTTCGTAGGTCGTCCTCA 59.481 55.000 3.91 0.00 43.94 3.86
3885 4330 1.727213 CGTTTCGTAGGTCGTCCTCAC 60.727 57.143 3.91 1.79 43.94 3.51
3886 4331 1.267806 GTTTCGTAGGTCGTCCTCACA 59.732 52.381 3.91 0.00 43.94 3.58
3887 4332 1.830279 TTCGTAGGTCGTCCTCACAT 58.170 50.000 3.91 0.00 43.94 3.21
3888 4333 1.830279 TCGTAGGTCGTCCTCACATT 58.170 50.000 3.91 0.00 43.94 2.71
3889 4334 2.165167 TCGTAGGTCGTCCTCACATTT 58.835 47.619 3.91 0.00 43.94 2.32
3890 4335 2.163010 TCGTAGGTCGTCCTCACATTTC 59.837 50.000 3.91 0.00 43.94 2.17
3891 4336 2.527100 GTAGGTCGTCCTCACATTTCG 58.473 52.381 3.91 0.00 43.94 3.46
3892 4337 0.966920 AGGTCGTCCTCACATTTCGT 59.033 50.000 0.00 0.00 40.58 3.85
3893 4338 2.165167 AGGTCGTCCTCACATTTCGTA 58.835 47.619 0.00 0.00 40.58 3.43
3894 4339 2.758979 AGGTCGTCCTCACATTTCGTAT 59.241 45.455 0.00 0.00 40.58 3.06
3895 4340 2.858344 GGTCGTCCTCACATTTCGTATG 59.142 50.000 0.00 0.00 0.00 2.39
3896 4341 3.508762 GTCGTCCTCACATTTCGTATGT 58.491 45.455 1.02 1.02 0.00 2.29
3898 4343 2.603110 CGTCCTCACATTTCGTATGTGG 59.397 50.000 23.37 16.92 46.78 4.17
3899 4344 3.596214 GTCCTCACATTTCGTATGTGGT 58.404 45.455 23.37 0.00 46.78 4.16
3900 4345 3.617263 GTCCTCACATTTCGTATGTGGTC 59.383 47.826 23.37 10.27 46.78 4.02
3901 4346 3.259625 TCCTCACATTTCGTATGTGGTCA 59.740 43.478 23.37 10.94 46.78 4.02
3902 4347 3.370978 CCTCACATTTCGTATGTGGTCAC 59.629 47.826 23.37 0.00 46.78 3.67
3903 4348 3.331150 TCACATTTCGTATGTGGTCACC 58.669 45.455 23.37 0.00 46.78 4.02
3904 4349 2.093625 CACATTTCGTATGTGGTCACCG 59.906 50.000 19.08 0.00 44.04 4.94
3905 4350 1.663643 CATTTCGTATGTGGTCACCGG 59.336 52.381 0.00 0.00 0.00 5.28
3906 4351 0.037139 TTTCGTATGTGGTCACCGGG 60.037 55.000 6.32 0.00 0.00 5.73
3907 4352 1.186917 TTCGTATGTGGTCACCGGGT 61.187 55.000 6.32 0.00 0.00 5.28
3908 4353 1.186917 TCGTATGTGGTCACCGGGTT 61.187 55.000 6.32 0.00 0.00 4.11
3909 4354 0.738412 CGTATGTGGTCACCGGGTTC 60.738 60.000 6.32 0.00 0.00 3.62
3910 4355 0.738412 GTATGTGGTCACCGGGTTCG 60.738 60.000 6.32 0.00 0.00 3.95
3911 4356 1.186917 TATGTGGTCACCGGGTTCGT 61.187 55.000 6.32 0.00 33.95 3.85
3912 4357 1.186917 ATGTGGTCACCGGGTTCGTA 61.187 55.000 6.32 0.00 33.95 3.43
3913 4358 1.367102 GTGGTCACCGGGTTCGTAA 59.633 57.895 6.32 0.00 33.95 3.18
3914 4359 0.668401 GTGGTCACCGGGTTCGTAAG 60.668 60.000 6.32 0.00 33.95 2.34
3915 4360 1.114722 TGGTCACCGGGTTCGTAAGT 61.115 55.000 6.32 0.00 39.48 2.24
3916 4361 0.389037 GGTCACCGGGTTCGTAAGTC 60.389 60.000 6.32 0.00 39.48 3.01
3917 4362 0.314935 GTCACCGGGTTCGTAAGTCA 59.685 55.000 6.32 0.00 39.48 3.41
3918 4363 0.599558 TCACCGGGTTCGTAAGTCAG 59.400 55.000 6.32 0.00 39.48 3.51
3919 4364 0.599558 CACCGGGTTCGTAAGTCAGA 59.400 55.000 6.32 0.00 39.48 3.27
3920 4365 1.203994 CACCGGGTTCGTAAGTCAGAT 59.796 52.381 6.32 0.00 39.48 2.90
3921 4366 1.203994 ACCGGGTTCGTAAGTCAGATG 59.796 52.381 6.32 0.00 39.48 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.320826 ACAAATTGTGCCTACCCTTTGTC 59.679 43.478 0.00 0.00 36.50 3.18
1 2 3.304829 ACAAATTGTGCCTACCCTTTGT 58.695 40.909 0.00 0.00 36.45 2.83
2 3 3.306019 GGACAAATTGTGCCTACCCTTTG 60.306 47.826 2.20 0.00 32.15 2.77
3 4 2.897326 GGACAAATTGTGCCTACCCTTT 59.103 45.455 2.20 0.00 32.15 3.11
4 5 2.525368 GGACAAATTGTGCCTACCCTT 58.475 47.619 2.20 0.00 32.15 3.95
5 6 1.613255 CGGACAAATTGTGCCTACCCT 60.613 52.381 11.91 0.00 35.09 4.34
6 7 0.808755 CGGACAAATTGTGCCTACCC 59.191 55.000 11.91 0.90 35.09 3.69
7 8 1.530323 ACGGACAAATTGTGCCTACC 58.470 50.000 11.91 1.61 35.09 3.18
8 9 3.332034 AGTACGGACAAATTGTGCCTAC 58.668 45.455 11.91 13.73 35.09 3.18
9 10 3.688694 AGTACGGACAAATTGTGCCTA 57.311 42.857 11.91 2.40 35.09 3.93
10 11 2.561478 AGTACGGACAAATTGTGCCT 57.439 45.000 11.91 3.37 35.09 4.75
11 12 4.957759 ATAAGTACGGACAAATTGTGCC 57.042 40.909 11.91 8.03 35.09 5.01
12 13 7.298507 TCTAATAAGTACGGACAAATTGTGC 57.701 36.000 2.20 5.25 35.21 4.57
34 35 7.448469 GCATACCCATGTACCTTGATAAAATCT 59.552 37.037 0.00 0.00 34.40 2.40
35 36 7.573096 CGCATACCCATGTACCTTGATAAAATC 60.573 40.741 0.00 0.00 34.40 2.17
36 37 6.206634 CGCATACCCATGTACCTTGATAAAAT 59.793 38.462 0.00 0.00 34.40 1.82
37 38 5.529430 CGCATACCCATGTACCTTGATAAAA 59.471 40.000 0.00 0.00 34.40 1.52
38 39 5.060506 CGCATACCCATGTACCTTGATAAA 58.939 41.667 0.00 0.00 34.40 1.40
39 40 4.504165 CCGCATACCCATGTACCTTGATAA 60.504 45.833 0.00 0.00 34.40 1.75
40 41 3.007506 CCGCATACCCATGTACCTTGATA 59.992 47.826 0.00 0.00 34.40 2.15
41 42 2.224523 CCGCATACCCATGTACCTTGAT 60.225 50.000 0.00 0.00 34.40 2.57
42 43 1.140052 CCGCATACCCATGTACCTTGA 59.860 52.381 0.00 0.00 34.40 3.02
43 44 1.593196 CCGCATACCCATGTACCTTG 58.407 55.000 0.00 0.00 34.40 3.61
44 45 0.472471 CCCGCATACCCATGTACCTT 59.528 55.000 0.00 0.00 34.40 3.50
45 46 0.693092 ACCCGCATACCCATGTACCT 60.693 55.000 0.00 0.00 34.40 3.08
46 47 1.050204 TACCCGCATACCCATGTACC 58.950 55.000 0.00 0.00 34.40 3.34
47 48 1.603678 CGTACCCGCATACCCATGTAC 60.604 57.143 0.00 0.00 34.40 2.90
48 49 0.675083 CGTACCCGCATACCCATGTA 59.325 55.000 0.00 0.00 34.40 2.29
49 50 1.444250 CGTACCCGCATACCCATGT 59.556 57.895 0.00 0.00 34.40 3.21
50 51 1.301401 CCGTACCCGCATACCCATG 60.301 63.158 0.00 0.00 35.07 3.66
51 52 2.513259 CCCGTACCCGCATACCCAT 61.513 63.158 0.00 0.00 0.00 4.00
52 53 3.155861 CCCGTACCCGCATACCCA 61.156 66.667 0.00 0.00 0.00 4.51
53 54 1.398958 TAACCCGTACCCGCATACCC 61.399 60.000 0.00 0.00 0.00 3.69
54 55 0.681175 ATAACCCGTACCCGCATACC 59.319 55.000 0.00 0.00 0.00 2.73
55 56 3.193267 TCATATAACCCGTACCCGCATAC 59.807 47.826 0.00 0.00 0.00 2.39
56 57 3.429492 TCATATAACCCGTACCCGCATA 58.571 45.455 0.00 0.00 0.00 3.14
57 58 2.250031 TCATATAACCCGTACCCGCAT 58.750 47.619 0.00 0.00 0.00 4.73
58 59 1.702182 TCATATAACCCGTACCCGCA 58.298 50.000 0.00 0.00 0.00 5.69
59 60 2.417787 GGATCATATAACCCGTACCCGC 60.418 54.545 0.00 0.00 0.00 6.13
60 61 2.167075 GGGATCATATAACCCGTACCCG 59.833 54.545 0.00 0.00 34.03 5.28
61 62 3.900966 GGGATCATATAACCCGTACCC 57.099 52.381 0.00 0.00 34.03 3.69
62 63 5.970592 GTAAGGGATCATATAACCCGTACC 58.029 45.833 17.66 0.00 45.81 3.34
67 68 3.842436 ACGGGTAAGGGATCATATAACCC 59.158 47.826 10.82 10.82 43.55 4.11
68 69 5.105187 GGTACGGGTAAGGGATCATATAACC 60.105 48.000 0.00 0.00 0.00 2.85
69 70 5.718607 AGGTACGGGTAAGGGATCATATAAC 59.281 44.000 0.00 0.00 0.00 1.89
70 71 5.718130 CAGGTACGGGTAAGGGATCATATAA 59.282 44.000 0.00 0.00 0.00 0.98
71 72 5.266788 CAGGTACGGGTAAGGGATCATATA 58.733 45.833 0.00 0.00 0.00 0.86
72 73 4.094476 CAGGTACGGGTAAGGGATCATAT 58.906 47.826 0.00 0.00 0.00 1.78
73 74 3.503365 CAGGTACGGGTAAGGGATCATA 58.497 50.000 0.00 0.00 0.00 2.15
74 75 2.326428 CAGGTACGGGTAAGGGATCAT 58.674 52.381 0.00 0.00 0.00 2.45
75 76 1.784358 CAGGTACGGGTAAGGGATCA 58.216 55.000 0.00 0.00 0.00 2.92
76 77 0.391966 GCAGGTACGGGTAAGGGATC 59.608 60.000 0.00 0.00 0.00 3.36
77 78 0.031414 AGCAGGTACGGGTAAGGGAT 60.031 55.000 0.00 0.00 29.10 3.85
78 79 0.685458 GAGCAGGTACGGGTAAGGGA 60.685 60.000 0.00 0.00 32.39 4.20
79 80 0.686769 AGAGCAGGTACGGGTAAGGG 60.687 60.000 0.00 0.00 32.39 3.95
80 81 1.680207 GTAGAGCAGGTACGGGTAAGG 59.320 57.143 0.00 0.00 32.39 2.69
81 82 1.680207 GGTAGAGCAGGTACGGGTAAG 59.320 57.143 0.00 0.00 32.39 2.34
82 83 1.686115 GGGTAGAGCAGGTACGGGTAA 60.686 57.143 0.00 0.00 32.39 2.85
83 84 0.106519 GGGTAGAGCAGGTACGGGTA 60.107 60.000 0.00 0.00 32.39 3.69
84 85 1.380920 GGGTAGAGCAGGTACGGGT 60.381 63.158 0.00 0.00 36.68 5.28
85 86 2.487532 CGGGTAGAGCAGGTACGGG 61.488 68.421 0.00 0.00 0.00 5.28
86 87 0.822532 ATCGGGTAGAGCAGGTACGG 60.823 60.000 0.00 0.00 0.00 4.02
87 88 0.311165 CATCGGGTAGAGCAGGTACG 59.689 60.000 0.00 0.00 0.00 3.67
88 89 0.674534 CCATCGGGTAGAGCAGGTAC 59.325 60.000 0.00 0.00 0.00 3.34
89 90 0.469331 CCCATCGGGTAGAGCAGGTA 60.469 60.000 0.00 0.00 38.25 3.08
90 91 1.762460 CCCATCGGGTAGAGCAGGT 60.762 63.158 0.00 0.00 38.25 4.00
91 92 3.142393 CCCATCGGGTAGAGCAGG 58.858 66.667 0.00 0.00 38.25 4.85
115 116 7.705700 ACCTATGGGTATATAAATGGGGAAAC 58.294 38.462 0.00 0.00 45.32 2.78
116 117 7.915209 ACCTATGGGTATATAAATGGGGAAA 57.085 36.000 0.00 0.00 45.32 3.13
117 118 9.064602 CTTACCTATGGGTATATAAATGGGGAA 57.935 37.037 9.02 5.50 46.25 3.97
118 119 8.195260 ACTTACCTATGGGTATATAAATGGGGA 58.805 37.037 9.02 0.00 46.25 4.81
119 120 8.401955 ACTTACCTATGGGTATATAAATGGGG 57.598 38.462 9.02 0.00 46.25 4.96
127 128 8.222637 GGGACAAAAACTTACCTATGGGTATAT 58.777 37.037 9.02 0.00 46.25 0.86
128 129 7.184204 TGGGACAAAAACTTACCTATGGGTATA 59.816 37.037 9.02 0.00 41.23 1.47
129 130 6.011451 TGGGACAAAAACTTACCTATGGGTAT 60.011 38.462 9.02 0.00 41.23 2.73
130 131 5.312708 TGGGACAAAAACTTACCTATGGGTA 59.687 40.000 3.39 3.39 40.90 3.69
131 132 4.106663 TGGGACAAAAACTTACCTATGGGT 59.893 41.667 5.87 5.87 42.71 4.51
132 133 4.461431 GTGGGACAAAAACTTACCTATGGG 59.539 45.833 0.00 0.00 44.16 4.00
133 134 5.048294 GTGTGGGACAAAAACTTACCTATGG 60.048 44.000 0.00 0.00 44.16 2.74
134 135 5.048294 GGTGTGGGACAAAAACTTACCTATG 60.048 44.000 0.00 0.00 44.16 2.23
135 136 5.074804 GGTGTGGGACAAAAACTTACCTAT 58.925 41.667 0.00 0.00 44.16 2.57
136 137 4.463070 GGTGTGGGACAAAAACTTACCTA 58.537 43.478 0.00 0.00 44.16 3.08
137 138 3.293337 GGTGTGGGACAAAAACTTACCT 58.707 45.455 0.00 0.00 44.16 3.08
138 139 2.363038 GGGTGTGGGACAAAAACTTACC 59.637 50.000 0.00 0.00 44.16 2.85
139 140 3.293337 AGGGTGTGGGACAAAAACTTAC 58.707 45.455 0.00 0.00 44.16 2.34
140 141 3.673543 AGGGTGTGGGACAAAAACTTA 57.326 42.857 0.00 0.00 44.16 2.24
141 142 2.499693 CAAGGGTGTGGGACAAAAACTT 59.500 45.455 0.00 0.00 44.16 2.66
142 143 2.107366 CAAGGGTGTGGGACAAAAACT 58.893 47.619 0.00 0.00 44.16 2.66
143 144 1.472552 GCAAGGGTGTGGGACAAAAAC 60.473 52.381 0.00 0.00 44.16 2.43
144 145 0.827368 GCAAGGGTGTGGGACAAAAA 59.173 50.000 0.00 0.00 44.16 1.94
145 146 1.045911 GGCAAGGGTGTGGGACAAAA 61.046 55.000 0.00 0.00 44.16 2.44
146 147 1.456705 GGCAAGGGTGTGGGACAAA 60.457 57.895 0.00 0.00 44.16 2.83
147 148 2.197324 GGCAAGGGTGTGGGACAA 59.803 61.111 0.00 0.00 44.16 3.18
148 149 2.993038 TAGGGCAAGGGTGTGGGACA 62.993 60.000 0.00 0.00 0.00 4.02
149 150 1.785353 TTAGGGCAAGGGTGTGGGAC 61.785 60.000 0.00 0.00 0.00 4.46
150 151 0.849094 ATTAGGGCAAGGGTGTGGGA 60.849 55.000 0.00 0.00 0.00 4.37
151 152 0.923358 TATTAGGGCAAGGGTGTGGG 59.077 55.000 0.00 0.00 0.00 4.61
152 153 1.133792 CCTATTAGGGCAAGGGTGTGG 60.134 57.143 1.37 0.00 0.00 4.17
153 154 2.348411 CCTATTAGGGCAAGGGTGTG 57.652 55.000 1.37 0.00 0.00 3.82
171 172 3.689414 CCCTGCGGGTAAAAACCC 58.311 61.111 11.58 3.34 46.43 4.11
181 182 0.472471 ATTACCCATGTACCCTGCGG 59.528 55.000 0.00 0.00 0.00 5.69
182 183 1.593196 CATTACCCATGTACCCTGCG 58.407 55.000 0.00 0.00 0.00 5.18
183 184 1.478654 CCCATTACCCATGTACCCTGC 60.479 57.143 0.00 0.00 0.00 4.85
184 185 1.850345 ACCCATTACCCATGTACCCTG 59.150 52.381 0.00 0.00 0.00 4.45
185 186 2.296943 ACCCATTACCCATGTACCCT 57.703 50.000 0.00 0.00 0.00 4.34
186 187 2.107031 GGTACCCATTACCCATGTACCC 59.893 54.545 0.00 0.00 44.41 3.69
187 188 3.497103 GGTACCCATTACCCATGTACC 57.503 52.381 0.00 0.00 44.41 3.34
203 204 4.704965 GAAGTAGGGATGTCAATGGGTAC 58.295 47.826 0.00 0.00 0.00 3.34
204 205 3.386726 CGAAGTAGGGATGTCAATGGGTA 59.613 47.826 0.00 0.00 0.00 3.69
205 206 2.170607 CGAAGTAGGGATGTCAATGGGT 59.829 50.000 0.00 0.00 0.00 4.51
206 207 2.485479 CCGAAGTAGGGATGTCAATGGG 60.485 54.545 0.00 0.00 0.00 4.00
207 208 2.434336 TCCGAAGTAGGGATGTCAATGG 59.566 50.000 0.00 0.00 0.00 3.16
208 209 3.118775 TGTCCGAAGTAGGGATGTCAATG 60.119 47.826 0.00 0.00 35.67 2.82
209 210 3.104512 TGTCCGAAGTAGGGATGTCAAT 58.895 45.455 0.00 0.00 35.67 2.57
210 211 2.232941 GTGTCCGAAGTAGGGATGTCAA 59.767 50.000 0.00 0.00 35.67 3.18
211 212 1.822990 GTGTCCGAAGTAGGGATGTCA 59.177 52.381 0.00 0.00 35.67 3.58
212 213 2.099427 GAGTGTCCGAAGTAGGGATGTC 59.901 54.545 0.00 0.00 35.67 3.06
213 214 2.100989 GAGTGTCCGAAGTAGGGATGT 58.899 52.381 0.00 0.00 35.67 3.06
214 215 2.379972 AGAGTGTCCGAAGTAGGGATG 58.620 52.381 0.00 0.00 35.67 3.51
215 216 2.830651 AGAGTGTCCGAAGTAGGGAT 57.169 50.000 0.00 0.00 35.67 3.85
216 217 2.599408 AAGAGTGTCCGAAGTAGGGA 57.401 50.000 0.00 0.00 0.00 4.20
217 218 3.068307 CCATAAGAGTGTCCGAAGTAGGG 59.932 52.174 0.00 0.00 0.00 3.53
218 219 3.491104 GCCATAAGAGTGTCCGAAGTAGG 60.491 52.174 0.00 0.00 0.00 3.18
219 220 3.491104 GGCCATAAGAGTGTCCGAAGTAG 60.491 52.174 0.00 0.00 0.00 2.57
220 221 2.429610 GGCCATAAGAGTGTCCGAAGTA 59.570 50.000 0.00 0.00 0.00 2.24
221 222 1.207329 GGCCATAAGAGTGTCCGAAGT 59.793 52.381 0.00 0.00 0.00 3.01
222 223 1.207089 TGGCCATAAGAGTGTCCGAAG 59.793 52.381 0.00 0.00 0.00 3.79
223 224 1.207089 CTGGCCATAAGAGTGTCCGAA 59.793 52.381 5.51 0.00 0.00 4.30
224 225 0.824109 CTGGCCATAAGAGTGTCCGA 59.176 55.000 5.51 0.00 0.00 4.55
225 226 0.811616 GCTGGCCATAAGAGTGTCCG 60.812 60.000 5.51 0.00 0.00 4.79
226 227 0.543749 AGCTGGCCATAAGAGTGTCC 59.456 55.000 5.51 0.00 0.00 4.02
227 228 2.012673 CAAGCTGGCCATAAGAGTGTC 58.987 52.381 5.51 0.00 0.00 3.67
228 229 1.340405 CCAAGCTGGCCATAAGAGTGT 60.340 52.381 5.51 0.00 0.00 3.55
229 230 1.065199 TCCAAGCTGGCCATAAGAGTG 60.065 52.381 5.51 0.00 37.47 3.51
230 231 1.211457 CTCCAAGCTGGCCATAAGAGT 59.789 52.381 5.51 0.00 37.47 3.24
231 232 1.476471 CCTCCAAGCTGGCCATAAGAG 60.476 57.143 5.51 8.61 37.47 2.85
232 233 0.548031 CCTCCAAGCTGGCCATAAGA 59.452 55.000 5.51 0.00 37.47 2.10
233 234 0.548031 TCCTCCAAGCTGGCCATAAG 59.452 55.000 5.51 0.00 37.47 1.73
234 235 0.548031 CTCCTCCAAGCTGGCCATAA 59.452 55.000 5.51 0.00 37.47 1.90
251 252 1.150536 TGTTTGCTCCCACACCCTC 59.849 57.895 0.00 0.00 0.00 4.30
258 259 2.079170 TTCCAATGTGTTTGCTCCCA 57.921 45.000 0.00 0.00 33.73 4.37
265 266 4.128643 CCTGCACAAATTCCAATGTGTTT 58.871 39.130 9.19 0.00 46.68 2.83
280 281 0.928505 ATCATTGGATCCCCTGCACA 59.071 50.000 9.90 0.00 0.00 4.57
281 282 1.325355 CATCATTGGATCCCCTGCAC 58.675 55.000 9.90 0.00 0.00 4.57
298 299 1.376424 CAGTGAACGCCCTCTGCAT 60.376 57.895 0.00 0.00 41.33 3.96
317 318 9.702726 ATATTAATGTCAAAAATTCGTGACTCG 57.297 29.630 17.61 0.00 43.73 4.18
385 400 6.305877 TGACACAAACGTGAAACAATTAACAC 59.694 34.615 0.00 0.00 37.83 3.32
393 408 4.686839 TTGATGACACAAACGTGAAACA 57.313 36.364 0.00 0.00 37.83 2.83
427 442 8.319585 GCTTAAAATCGGTTAAAACGTGAAAAA 58.680 29.630 0.00 0.00 0.00 1.94
429 444 6.971184 TGCTTAAAATCGGTTAAAACGTGAAA 59.029 30.769 0.00 0.00 0.00 2.69
430 445 6.493116 TGCTTAAAATCGGTTAAAACGTGAA 58.507 32.000 0.00 0.00 0.00 3.18
432 447 6.735263 TTGCTTAAAATCGGTTAAAACGTG 57.265 33.333 0.00 0.00 0.00 4.49
433 448 6.075467 CGTTTGCTTAAAATCGGTTAAAACGT 60.075 34.615 8.27 0.00 33.83 3.99
434 449 6.275945 CGTTTGCTTAAAATCGGTTAAAACG 58.724 36.000 0.00 0.00 32.71 3.60
435 450 6.060150 GCGTTTGCTTAAAATCGGTTAAAAC 58.940 36.000 0.00 0.00 38.39 2.43
459 480 3.707179 CGTGTTCGAAAACTATGACACG 58.293 45.455 17.41 17.41 42.38 4.49
520 541 9.733556 TGAAGACCAAGCTATGACTTATTTTTA 57.266 29.630 0.00 0.00 0.00 1.52
521 542 8.635765 TGAAGACCAAGCTATGACTTATTTTT 57.364 30.769 0.00 0.00 0.00 1.94
522 543 8.814038 ATGAAGACCAAGCTATGACTTATTTT 57.186 30.769 0.00 0.00 0.00 1.82
523 544 8.814038 AATGAAGACCAAGCTATGACTTATTT 57.186 30.769 0.00 0.00 0.00 1.40
524 545 8.270744 AGAATGAAGACCAAGCTATGACTTATT 58.729 33.333 0.00 0.00 0.00 1.40
525 546 7.800092 AGAATGAAGACCAAGCTATGACTTAT 58.200 34.615 0.00 0.00 0.00 1.73
529 550 6.019479 CGTTAGAATGAAGACCAAGCTATGAC 60.019 42.308 0.00 0.00 0.00 3.06
540 561 6.755141 TGCTATGGTAACGTTAGAATGAAGAC 59.245 38.462 8.60 0.00 42.51 3.01
592 613 1.845809 GCCACACCTCGACTTGCTTG 61.846 60.000 0.00 0.00 0.00 4.01
680 702 2.661594 TGACGATCGAGTTGACAAGTG 58.338 47.619 24.34 0.00 0.00 3.16
708 730 3.703556 AGGACCACATGACTGTATCAGAG 59.296 47.826 0.00 0.00 41.91 3.35
718 740 4.339247 CCCATGAATTAAGGACCACATGAC 59.661 45.833 0.00 0.00 37.77 3.06
726 748 6.661805 TGTTAAGGTTCCCATGAATTAAGGAC 59.338 38.462 0.00 0.00 31.98 3.85
804 826 2.731691 GAACGTCTTCTGGCTGGCCA 62.732 60.000 13.96 13.96 45.02 5.36
805 827 2.032681 AACGTCTTCTGGCTGGCC 59.967 61.111 4.43 4.43 0.00 5.36
806 828 1.301716 TGAACGTCTTCTGGCTGGC 60.302 57.895 0.00 0.00 0.00 4.85
807 829 0.249868 TGTGAACGTCTTCTGGCTGG 60.250 55.000 0.00 0.00 0.00 4.85
808 830 1.581934 TTGTGAACGTCTTCTGGCTG 58.418 50.000 0.00 0.00 0.00 4.85
809 831 2.550830 ATTGTGAACGTCTTCTGGCT 57.449 45.000 0.00 0.00 0.00 4.75
810 832 4.742438 TTAATTGTGAACGTCTTCTGGC 57.258 40.909 0.00 0.00 0.00 4.85
811 833 7.326063 GGAATTTTAATTGTGAACGTCTTCTGG 59.674 37.037 0.00 0.00 0.00 3.86
812 834 8.076178 AGGAATTTTAATTGTGAACGTCTTCTG 58.924 33.333 0.00 0.00 0.00 3.02
813 835 8.076178 CAGGAATTTTAATTGTGAACGTCTTCT 58.924 33.333 0.00 0.00 0.00 2.85
814 836 7.860872 ACAGGAATTTTAATTGTGAACGTCTTC 59.139 33.333 0.00 0.00 0.00 2.87
815 837 7.712797 ACAGGAATTTTAATTGTGAACGTCTT 58.287 30.769 0.00 0.00 0.00 3.01
816 838 7.272037 ACAGGAATTTTAATTGTGAACGTCT 57.728 32.000 0.00 0.00 0.00 4.18
817 839 7.149192 CGAACAGGAATTTTAATTGTGAACGTC 60.149 37.037 0.00 0.00 0.00 4.34
818 840 6.635239 CGAACAGGAATTTTAATTGTGAACGT 59.365 34.615 0.00 0.00 0.00 3.99
819 841 6.398517 GCGAACAGGAATTTTAATTGTGAACG 60.399 38.462 0.00 0.00 0.00 3.95
820 842 6.398517 CGCGAACAGGAATTTTAATTGTGAAC 60.399 38.462 0.00 0.00 0.00 3.18
821 843 5.627367 CGCGAACAGGAATTTTAATTGTGAA 59.373 36.000 0.00 0.00 0.00 3.18
822 844 5.150683 CGCGAACAGGAATTTTAATTGTGA 58.849 37.500 0.00 0.00 0.00 3.58
823 845 4.915085 ACGCGAACAGGAATTTTAATTGTG 59.085 37.500 15.93 0.00 0.00 3.33
824 846 5.048991 AGACGCGAACAGGAATTTTAATTGT 60.049 36.000 15.93 0.00 0.00 2.71
825 847 5.283717 CAGACGCGAACAGGAATTTTAATTG 59.716 40.000 15.93 0.00 0.00 2.32
826 848 5.390613 CAGACGCGAACAGGAATTTTAATT 58.609 37.500 15.93 0.00 0.00 1.40
827 849 4.142687 CCAGACGCGAACAGGAATTTTAAT 60.143 41.667 15.93 0.00 0.00 1.40
828 850 3.187637 CCAGACGCGAACAGGAATTTTAA 59.812 43.478 15.93 0.00 0.00 1.52
829 851 2.739913 CCAGACGCGAACAGGAATTTTA 59.260 45.455 15.93 0.00 0.00 1.52
830 852 1.535462 CCAGACGCGAACAGGAATTTT 59.465 47.619 15.93 0.00 0.00 1.82
858 912 7.814587 TGTAGCATTACTCTTTATCCATCGATG 59.185 37.037 18.76 18.76 0.00 3.84
871 925 7.425224 ACCTTTGTAGATGTAGCATTACTCT 57.575 36.000 0.00 0.00 0.00 3.24
872 926 8.494016 AAACCTTTGTAGATGTAGCATTACTC 57.506 34.615 0.00 0.00 0.00 2.59
873 927 9.379791 GTAAACCTTTGTAGATGTAGCATTACT 57.620 33.333 0.00 0.00 0.00 2.24
874 928 9.379791 AGTAAACCTTTGTAGATGTAGCATTAC 57.620 33.333 0.00 0.00 0.00 1.89
875 929 9.953565 AAGTAAACCTTTGTAGATGTAGCATTA 57.046 29.630 0.00 0.00 0.00 1.90
876 930 8.863872 AAGTAAACCTTTGTAGATGTAGCATT 57.136 30.769 0.00 0.00 0.00 3.56
877 931 9.953565 TTAAGTAAACCTTTGTAGATGTAGCAT 57.046 29.630 0.00 0.00 34.46 3.79
878 932 9.953565 ATTAAGTAAACCTTTGTAGATGTAGCA 57.046 29.630 0.00 0.00 34.46 3.49
893 947 7.368059 CCTTGTGAAGGTTGATTAAGTAAACC 58.632 38.462 8.12 8.12 43.95 3.27
989 1043 3.049674 CTTGCATGGCGTGACCGT 61.050 61.111 11.71 0.00 43.94 4.83
990 1044 2.741985 TCTTGCATGGCGTGACCG 60.742 61.111 11.71 0.00 43.94 4.79
991 1045 1.237285 AACTCTTGCATGGCGTGACC 61.237 55.000 11.71 0.00 39.84 4.02
992 1046 0.110056 CAACTCTTGCATGGCGTGAC 60.110 55.000 11.71 2.46 0.00 3.67
993 1047 0.250252 TCAACTCTTGCATGGCGTGA 60.250 50.000 11.71 0.00 0.00 4.35
1039 1099 2.951745 GCTGCCGATGACGACGAG 60.952 66.667 0.00 0.00 42.66 4.18
1419 1487 2.361119 AGACTTAGACGTGCACTGTTCA 59.639 45.455 16.19 4.12 0.00 3.18
1961 2038 0.102120 GACCACAGCCTCGATCTCTG 59.898 60.000 7.04 7.04 0.00 3.35
2125 2202 7.063544 CGAGAAATCGATTAGAGAACAGGTTTT 59.936 37.037 11.83 0.00 34.64 2.43
2206 2284 9.784531 ATCCGTTCTAATTTCATCATTCTACAT 57.215 29.630 0.00 0.00 0.00 2.29
2225 2303 8.589335 TCTAAGCATTTTCTATGTATCCGTTC 57.411 34.615 0.00 0.00 0.00 3.95
2262 2340 7.833183 AGAGCATAAAGACTTCATTCTGGATTT 59.167 33.333 0.00 0.00 0.00 2.17
2263 2341 7.344913 AGAGCATAAAGACTTCATTCTGGATT 58.655 34.615 0.00 0.00 0.00 3.01
2264 2342 6.897986 AGAGCATAAAGACTTCATTCTGGAT 58.102 36.000 0.00 0.00 0.00 3.41
2340 2419 9.331282 GAGTATTCTTGCAATAGGACTAACAAT 57.669 33.333 0.00 0.00 0.00 2.71
2344 2423 7.125811 AGTGGAGTATTCTTGCAATAGGACTAA 59.874 37.037 0.00 0.00 0.00 2.24
2345 2424 6.611642 AGTGGAGTATTCTTGCAATAGGACTA 59.388 38.462 0.00 0.00 0.00 2.59
2432 2512 9.865321 GTATGTGTGACCTTGACTTATACTAAA 57.135 33.333 0.00 0.00 0.00 1.85
2438 2518 7.004555 TCAAGTATGTGTGACCTTGACTTAT 57.995 36.000 0.00 0.00 38.61 1.73
2439 2519 6.413783 TCAAGTATGTGTGACCTTGACTTA 57.586 37.500 0.00 0.00 38.61 2.24
2440 2520 5.290493 TCAAGTATGTGTGACCTTGACTT 57.710 39.130 0.00 0.00 38.61 3.01
2461 2541 4.876107 TCACCTTGCGAGGAAGAAAATATC 59.124 41.667 27.65 0.00 46.74 1.63
2501 2581 4.776322 CGCCGGCCATCCAGAACA 62.776 66.667 23.46 0.00 0.00 3.18
2526 2606 1.816863 AACTGCACGATCGTCCCTGT 61.817 55.000 19.84 17.98 0.00 4.00
2528 2608 1.215647 GAACTGCACGATCGTCCCT 59.784 57.895 19.84 0.85 0.00 4.20
2556 2636 3.636231 CTTGTCCCGCCCCAGACA 61.636 66.667 0.00 0.00 41.13 3.41
2741 2821 1.310904 TTGCAACGAAGTACCCCAAC 58.689 50.000 0.00 0.00 45.00 3.77
2742 2822 1.677052 GTTTGCAACGAAGTACCCCAA 59.323 47.619 0.00 0.00 45.00 4.12
2855 2936 2.781300 GTGAGCTTAGCACGCAGC 59.219 61.111 7.07 0.00 46.19 5.25
2896 2977 2.155279 GGTCTGAAAAGGCTCCTGAAC 58.845 52.381 0.00 0.00 0.00 3.18
2978 3059 4.531732 ACCCCTGAATGTTTGTATGCATTT 59.468 37.500 3.54 0.00 35.69 2.32
2994 3075 1.216678 TGGAAAGCAGAAAACCCCTGA 59.783 47.619 0.00 0.00 33.65 3.86
2995 3076 1.703411 TGGAAAGCAGAAAACCCCTG 58.297 50.000 0.00 0.00 34.88 4.45
2996 3077 2.702270 ATGGAAAGCAGAAAACCCCT 57.298 45.000 0.00 0.00 0.00 4.79
3052 3138 7.416154 ACTTTTGATCATGCAATTCAAACAG 57.584 32.000 16.85 17.27 38.65 3.16
3110 3196 2.290832 TGATACATGAGCCTTTGTGCCA 60.291 45.455 0.00 0.00 0.00 4.92
3111 3197 2.368439 TGATACATGAGCCTTTGTGCC 58.632 47.619 0.00 0.00 0.00 5.01
3126 3212 6.187727 TGTCCAATTTCCCCTCTATGATAC 57.812 41.667 0.00 0.00 0.00 2.24
3130 3216 4.860022 ACTTGTCCAATTTCCCCTCTATG 58.140 43.478 0.00 0.00 0.00 2.23
3131 3217 4.790790 AGACTTGTCCAATTTCCCCTCTAT 59.209 41.667 0.00 0.00 0.00 1.98
3135 3240 3.267031 CCTAGACTTGTCCAATTTCCCCT 59.733 47.826 0.00 0.00 0.00 4.79
3150 3255 1.878656 GCGAGTGCACCACCTAGACT 61.879 60.000 14.63 0.00 42.15 3.24
3184 3289 1.003704 TCGGAAAGGGGGCATCCTA 59.996 57.895 0.00 0.00 35.80 2.94
3188 3293 1.304134 GTTGTCGGAAAGGGGGCAT 60.304 57.895 0.00 0.00 0.00 4.40
3215 3321 2.687935 CCGACACCCATTCAATTTAGGG 59.312 50.000 0.00 0.00 46.96 3.53
3227 3333 3.948719 GCAAGGTCCCGACACCCA 61.949 66.667 0.00 0.00 37.09 4.51
3244 3686 0.811915 AACATCGTCCTCGTCTCCAG 59.188 55.000 0.00 0.00 38.33 3.86
3249 3691 1.068472 ACTCACAACATCGTCCTCGTC 60.068 52.381 0.00 0.00 38.33 4.20
3262 3704 2.064434 TGGGATGTTGCAACTCACAA 57.936 45.000 28.61 10.03 0.00 3.33
3296 3738 2.382882 TCTTCTCTGATGACGGCAGAT 58.617 47.619 0.00 0.00 41.20 2.90
3303 3745 4.497340 CCGCTCTAGTTCTTCTCTGATGAC 60.497 50.000 0.00 0.00 0.00 3.06
3306 3748 2.955660 CCCGCTCTAGTTCTTCTCTGAT 59.044 50.000 0.00 0.00 0.00 2.90
3308 3750 1.407258 CCCCGCTCTAGTTCTTCTCTG 59.593 57.143 0.00 0.00 0.00 3.35
3309 3751 1.686741 CCCCCGCTCTAGTTCTTCTCT 60.687 57.143 0.00 0.00 0.00 3.10
3324 3766 2.188469 CCACCATCGTAACCCCCG 59.812 66.667 0.00 0.00 0.00 5.73
3330 3772 0.322098 CCAAGCCACCACCATCGTAA 60.322 55.000 0.00 0.00 0.00 3.18
3340 3782 1.152963 ACGATATGCCCAAGCCACC 60.153 57.895 0.00 0.00 38.69 4.61
3425 3868 6.899393 TCCATCATAATTTGATTAGGTGGC 57.101 37.500 0.00 0.00 42.62 5.01
3440 3884 5.353123 GGTAACTGAAAACGCTTCCATCATA 59.647 40.000 0.00 0.00 0.00 2.15
3461 3905 2.054799 GGGCCACCTATTCATCAGGTA 58.945 52.381 4.39 0.00 44.81 3.08
3480 3924 6.070194 AGGGTTGATCGGTTGATATATTAGGG 60.070 42.308 0.00 0.00 34.09 3.53
3488 3932 4.703897 GAATCAGGGTTGATCGGTTGATA 58.296 43.478 0.00 0.00 43.20 2.15
3516 3960 7.818997 AGTACCGAGAATAATCACTCATGTA 57.181 36.000 0.00 0.00 33.86 2.29
3522 3966 5.395324 CCACCAAGTACCGAGAATAATCACT 60.395 44.000 0.00 0.00 0.00 3.41
3529 3973 6.989155 TTATATCCACCAAGTACCGAGAAT 57.011 37.500 0.00 0.00 0.00 2.40
3532 3976 6.073222 GCAAATTATATCCACCAAGTACCGAG 60.073 42.308 0.00 0.00 0.00 4.63
3534 3978 5.529430 TGCAAATTATATCCACCAAGTACCG 59.471 40.000 0.00 0.00 0.00 4.02
3536 3980 7.328277 TGTGCAAATTATATCCACCAAGTAC 57.672 36.000 0.00 0.00 0.00 2.73
3546 3990 9.630098 CCATACCTTCATTGTGCAAATTATATC 57.370 33.333 0.00 0.00 0.00 1.63
3578 4022 6.053005 CCTTACCACTGAAACTCAACACTTA 58.947 40.000 0.00 0.00 0.00 2.24
3581 4025 4.448210 TCCTTACCACTGAAACTCAACAC 58.552 43.478 0.00 0.00 0.00 3.32
3623 4068 5.186409 AGCAAAATGATGGCATTACTTGAGT 59.814 36.000 15.81 3.98 43.71 3.41
3626 4071 7.204604 TCATAGCAAAATGATGGCATTACTTG 58.795 34.615 0.00 6.50 43.71 3.16
3638 4083 8.149647 AGTTTGAAAACCATCATAGCAAAATGA 58.850 29.630 2.34 0.00 39.71 2.57
3673 4118 6.149308 AGCATCGAACATCTGTTTACAAATCA 59.851 34.615 0.00 0.00 38.56 2.57
3729 4174 3.434299 GCCTTCCAATGCAATTTTCAGTG 59.566 43.478 0.00 0.00 31.22 3.66
3731 4176 3.934068 AGCCTTCCAATGCAATTTTCAG 58.066 40.909 0.00 0.00 31.22 3.02
3732 4177 4.066490 CAAGCCTTCCAATGCAATTTTCA 58.934 39.130 0.00 0.00 31.22 2.69
3736 4181 1.980036 ACCAAGCCTTCCAATGCAATT 59.020 42.857 0.00 0.00 36.63 2.32
3794 4239 9.833917 GAAGCAATAGTCCTTTTATTAGTAGGT 57.166 33.333 0.00 0.00 0.00 3.08
3801 4246 9.700831 ATGGTAAGAAGCAATAGTCCTTTTATT 57.299 29.630 0.00 0.00 36.53 1.40
3802 4247 9.343539 GATGGTAAGAAGCAATAGTCCTTTTAT 57.656 33.333 0.00 0.00 36.53 1.40
3803 4248 8.325787 TGATGGTAAGAAGCAATAGTCCTTTTA 58.674 33.333 0.00 0.00 36.53 1.52
3804 4249 7.175104 TGATGGTAAGAAGCAATAGTCCTTTT 58.825 34.615 0.00 0.00 36.53 2.27
3805 4250 6.721318 TGATGGTAAGAAGCAATAGTCCTTT 58.279 36.000 0.00 0.00 36.53 3.11
3806 4251 6.313519 TGATGGTAAGAAGCAATAGTCCTT 57.686 37.500 0.00 0.00 36.53 3.36
3807 4252 5.957771 TGATGGTAAGAAGCAATAGTCCT 57.042 39.130 0.00 0.00 36.53 3.85
3808 4253 7.934120 ACTTATGATGGTAAGAAGCAATAGTCC 59.066 37.037 1.07 0.00 36.53 3.85
3809 4254 8.894768 ACTTATGATGGTAAGAAGCAATAGTC 57.105 34.615 1.07 0.00 36.53 2.59
3810 4255 9.331282 GAACTTATGATGGTAAGAAGCAATAGT 57.669 33.333 1.07 0.00 36.53 2.12
3811 4256 8.491152 CGAACTTATGATGGTAAGAAGCAATAG 58.509 37.037 1.07 0.00 36.53 1.73
3812 4257 7.985184 ACGAACTTATGATGGTAAGAAGCAATA 59.015 33.333 0.00 0.00 36.53 1.90
3813 4258 6.823689 ACGAACTTATGATGGTAAGAAGCAAT 59.176 34.615 0.00 0.00 36.53 3.56
3814 4259 6.170506 ACGAACTTATGATGGTAAGAAGCAA 58.829 36.000 0.00 0.00 36.53 3.91
3815 4260 5.730550 ACGAACTTATGATGGTAAGAAGCA 58.269 37.500 0.00 0.00 35.96 3.91
3816 4261 5.234543 GGACGAACTTATGATGGTAAGAAGC 59.765 44.000 0.00 0.00 35.96 3.86
3817 4262 5.459107 CGGACGAACTTATGATGGTAAGAAG 59.541 44.000 0.00 0.00 35.96 2.85
3818 4263 5.105635 ACGGACGAACTTATGATGGTAAGAA 60.106 40.000 0.00 0.00 35.96 2.52
3819 4264 4.400251 ACGGACGAACTTATGATGGTAAGA 59.600 41.667 0.00 0.00 35.96 2.10
3820 4265 4.679662 ACGGACGAACTTATGATGGTAAG 58.320 43.478 0.00 0.00 37.62 2.34
3821 4266 4.724074 ACGGACGAACTTATGATGGTAA 57.276 40.909 0.00 0.00 0.00 2.85
3822 4267 4.724074 AACGGACGAACTTATGATGGTA 57.276 40.909 0.00 0.00 0.00 3.25
3823 4268 3.604875 AACGGACGAACTTATGATGGT 57.395 42.857 0.00 0.00 0.00 3.55
3824 4269 4.939509 AAAACGGACGAACTTATGATGG 57.060 40.909 0.00 0.00 0.00 3.51
3825 4270 5.086058 CCAAAAACGGACGAACTTATGATG 58.914 41.667 0.00 0.00 0.00 3.07
3826 4271 4.758165 ACCAAAAACGGACGAACTTATGAT 59.242 37.500 0.00 0.00 0.00 2.45
3827 4272 4.128643 ACCAAAAACGGACGAACTTATGA 58.871 39.130 0.00 0.00 0.00 2.15
3828 4273 4.477302 ACCAAAAACGGACGAACTTATG 57.523 40.909 0.00 0.00 0.00 1.90
3829 4274 4.023792 GGAACCAAAAACGGACGAACTTAT 60.024 41.667 0.00 0.00 0.00 1.73
3830 4275 3.312146 GGAACCAAAAACGGACGAACTTA 59.688 43.478 0.00 0.00 0.00 2.24
3831 4276 2.097954 GGAACCAAAAACGGACGAACTT 59.902 45.455 0.00 0.00 0.00 2.66
3832 4277 1.672363 GGAACCAAAAACGGACGAACT 59.328 47.619 0.00 0.00 0.00 3.01
3833 4278 1.401199 TGGAACCAAAAACGGACGAAC 59.599 47.619 0.00 0.00 0.00 3.95
3834 4279 1.401199 GTGGAACCAAAAACGGACGAA 59.599 47.619 0.00 0.00 0.00 3.85
3835 4280 1.015868 GTGGAACCAAAAACGGACGA 58.984 50.000 0.00 0.00 0.00 4.20
3836 4281 3.537471 GTGGAACCAAAAACGGACG 57.463 52.632 0.00 0.00 0.00 4.79
3848 4293 3.343380 AACGAAATTTGACGGTGGAAC 57.657 42.857 0.00 0.00 0.00 3.62
3849 4294 3.546417 CGAAACGAAATTTGACGGTGGAA 60.546 43.478 0.00 0.00 0.00 3.53
3850 4295 2.032722 CGAAACGAAATTTGACGGTGGA 60.033 45.455 0.00 0.00 0.00 4.02
3851 4296 2.286536 ACGAAACGAAATTTGACGGTGG 60.287 45.455 0.00 0.00 0.00 4.61
3852 4297 2.976729 ACGAAACGAAATTTGACGGTG 58.023 42.857 0.00 0.00 0.00 4.94
3853 4298 3.184986 CCTACGAAACGAAATTTGACGGT 59.815 43.478 0.00 0.00 0.00 4.83
3854 4299 3.184986 ACCTACGAAACGAAATTTGACGG 59.815 43.478 0.00 0.00 0.00 4.79
3855 4300 4.379374 ACCTACGAAACGAAATTTGACG 57.621 40.909 0.00 0.00 0.00 4.35
3856 4301 4.084900 ACGACCTACGAAACGAAATTTGAC 60.085 41.667 0.00 0.00 45.77 3.18
3857 4302 4.050553 ACGACCTACGAAACGAAATTTGA 58.949 39.130 0.00 0.00 45.77 2.69
3858 4303 4.379374 ACGACCTACGAAACGAAATTTG 57.621 40.909 0.00 0.00 45.77 2.32
3859 4304 3.429881 GGACGACCTACGAAACGAAATTT 59.570 43.478 0.00 0.00 45.77 1.82
3860 4305 2.989166 GGACGACCTACGAAACGAAATT 59.011 45.455 0.00 0.00 45.77 1.82
3861 4306 2.229784 AGGACGACCTACGAAACGAAAT 59.770 45.455 4.08 0.00 45.83 2.17
3862 4307 1.608590 AGGACGACCTACGAAACGAAA 59.391 47.619 4.08 0.00 45.83 3.46
3863 4308 1.238439 AGGACGACCTACGAAACGAA 58.762 50.000 4.08 0.00 45.83 3.85
3864 4309 2.932663 AGGACGACCTACGAAACGA 58.067 52.632 4.08 0.00 45.83 3.85
3874 4319 2.642139 TACGAAATGTGAGGACGACC 57.358 50.000 0.00 0.00 0.00 4.79
3875 4320 3.508762 ACATACGAAATGTGAGGACGAC 58.491 45.455 7.24 0.00 0.00 4.34
3876 4321 3.861276 ACATACGAAATGTGAGGACGA 57.139 42.857 7.24 0.00 0.00 4.20
3883 4328 2.093625 CGGTGACCACATACGAAATGTG 59.906 50.000 21.15 21.15 46.49 3.21
3884 4329 2.343101 CGGTGACCACATACGAAATGT 58.657 47.619 1.11 0.00 33.46 2.71
3885 4330 1.663643 CCGGTGACCACATACGAAATG 59.336 52.381 1.11 0.00 33.46 2.32
3886 4331 1.406341 CCCGGTGACCACATACGAAAT 60.406 52.381 1.11 0.00 33.46 2.17
3887 4332 0.037139 CCCGGTGACCACATACGAAA 60.037 55.000 1.11 0.00 33.46 3.46
3888 4333 1.186917 ACCCGGTGACCACATACGAA 61.187 55.000 1.11 0.00 33.46 3.85
3889 4334 1.186917 AACCCGGTGACCACATACGA 61.187 55.000 1.11 0.00 33.46 3.43
3890 4335 0.738412 GAACCCGGTGACCACATACG 60.738 60.000 1.11 0.00 0.00 3.06
3891 4336 0.738412 CGAACCCGGTGACCACATAC 60.738 60.000 1.11 0.00 0.00 2.39
3892 4337 1.186917 ACGAACCCGGTGACCACATA 61.187 55.000 1.11 0.00 40.78 2.29
3893 4338 1.186917 TACGAACCCGGTGACCACAT 61.187 55.000 1.11 0.00 40.78 3.21
3894 4339 1.398174 TTACGAACCCGGTGACCACA 61.398 55.000 1.11 0.00 40.78 4.17
3895 4340 0.668401 CTTACGAACCCGGTGACCAC 60.668 60.000 1.11 0.00 40.78 4.16
3896 4341 1.114722 ACTTACGAACCCGGTGACCA 61.115 55.000 1.11 0.00 40.78 4.02
3897 4342 0.389037 GACTTACGAACCCGGTGACC 60.389 60.000 0.00 0.00 40.78 4.02
3898 4343 0.314935 TGACTTACGAACCCGGTGAC 59.685 55.000 0.00 0.00 40.78 3.67
3899 4344 0.599558 CTGACTTACGAACCCGGTGA 59.400 55.000 0.00 0.00 40.78 4.02
3900 4345 0.599558 TCTGACTTACGAACCCGGTG 59.400 55.000 0.00 0.00 40.78 4.94
3901 4346 1.203994 CATCTGACTTACGAACCCGGT 59.796 52.381 0.00 0.00 40.78 5.28
3902 4347 1.922570 CATCTGACTTACGAACCCGG 58.077 55.000 0.00 0.00 40.78 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.