Multiple sequence alignment - TraesCS4A01G003100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G003100 chr4A 100.000 2707 0 0 745 3451 2637863 2635157 0.000000e+00 5000.0
1 TraesCS4A01G003100 chr4A 79.435 1415 239 34 1049 2430 2556259 2554864 0.000000e+00 953.0
2 TraesCS4A01G003100 chr4A 100.000 491 0 0 1 491 2638607 2638117 0.000000e+00 907.0
3 TraesCS4A01G003100 chr4A 81.403 941 152 17 1490 2423 2737913 2738837 0.000000e+00 747.0
4 TraesCS4A01G003100 chr4A 81.309 947 152 20 1492 2430 2775105 2776034 0.000000e+00 745.0
5 TraesCS4A01G003100 chr4D 93.522 1837 70 13 765 2568 469074311 469072491 0.000000e+00 2687.0
6 TraesCS4A01G003100 chr4D 92.734 757 31 12 2695 3451 414628278 414629010 0.000000e+00 1072.0
7 TraesCS4A01G003100 chr4D 90.225 757 32 17 2695 3451 469124113 469123399 0.000000e+00 950.0
8 TraesCS4A01G003100 chr4D 82.535 939 145 12 1490 2423 468899385 468898461 0.000000e+00 808.0
9 TraesCS4A01G003100 chr4D 81.184 946 155 16 1492 2430 468862696 468861767 0.000000e+00 739.0
10 TraesCS4A01G003100 chr4D 89.007 282 16 7 84 355 469075579 469075303 5.520000e-88 335.0
11 TraesCS4A01G003100 chr4D 86.755 151 7 7 340 490 469074475 469074338 4.610000e-34 156.0
12 TraesCS4A01G003100 chr4D 86.755 151 7 7 340 490 469075285 469075148 4.610000e-34 156.0
13 TraesCS4A01G003100 chr4B 92.384 1707 89 17 860 2553 588788808 588787130 0.000000e+00 2394.0
14 TraesCS4A01G003100 chr4B 84.404 436 34 12 84 490 588789464 588789034 6.940000e-107 398.0
15 TraesCS4A01G003100 chr4B 100.000 84 0 0 1 84 143901767 143901850 4.610000e-34 156.0
16 TraesCS4A01G003100 chr7A 97.354 756 20 0 2696 3451 100728378 100729133 0.000000e+00 1286.0
17 TraesCS4A01G003100 chr7A 93.274 788 22 10 2695 3451 47603490 47602703 0.000000e+00 1133.0
18 TraesCS4A01G003100 chr7A 93.931 758 22 5 2694 3451 732095060 732095793 0.000000e+00 1123.0
19 TraesCS4A01G003100 chr7A 97.934 484 10 0 2968 3451 47582663 47582180 0.000000e+00 839.0
20 TraesCS4A01G003100 chr7A 81.018 943 174 4 1491 2429 101433562 101434503 0.000000e+00 745.0
21 TraesCS4A01G003100 chr7A 81.402 328 59 2 1046 1372 101432997 101433323 2.040000e-67 267.0
22 TraesCS4A01G003100 chr7A 87.654 81 7 3 2583 2661 725559573 725559494 1.320000e-14 91.6
23 TraesCS4A01G003100 chr2D 88.605 1018 97 8 1434 2451 636355169 636356167 0.000000e+00 1219.0
24 TraesCS4A01G003100 chr2D 93.536 758 24 14 2695 3451 11084062 11084795 0.000000e+00 1105.0
25 TraesCS4A01G003100 chr2D 92.348 758 24 12 2694 3451 155541880 155542603 0.000000e+00 1048.0
26 TraesCS4A01G003100 chr2D 91.732 762 34 17 2695 3451 97611217 97610480 0.000000e+00 1031.0
27 TraesCS4A01G003100 chr2D 91.064 761 39 17 2695 3451 114809552 114808817 0.000000e+00 1002.0
28 TraesCS4A01G003100 chr2D 91.185 363 31 1 1039 1401 636354741 636355102 3.090000e-135 492.0
29 TraesCS4A01G003100 chr2D 89.744 78 8 0 3 80 489049515 489049438 2.190000e-17 100.0
30 TraesCS4A01G003100 chr2D 87.838 74 5 4 2582 2654 317495195 317495265 2.210000e-12 84.2
31 TraesCS4A01G003100 chr1A 93.923 757 26 8 2695 3451 534514211 534514947 0.000000e+00 1125.0
32 TraesCS4A01G003100 chr1D 92.308 767 21 11 2685 3451 276505324 276506052 0.000000e+00 1055.0
33 TraesCS4A01G003100 chr6D 92.338 757 33 10 2695 3451 445334427 445333696 0.000000e+00 1053.0
34 TraesCS4A01G003100 chr5D 92.074 757 23 10 2695 3451 384193315 384192596 0.000000e+00 1031.0
35 TraesCS4A01G003100 chr5A 90.909 77 6 1 2580 2655 318270009 318269933 6.090000e-18 102.0
36 TraesCS4A01G003100 chr5A 88.000 75 8 1 2582 2655 672743295 672743369 1.710000e-13 87.9
37 TraesCS4A01G003100 chr7B 88.158 76 7 2 2581 2655 629046007 629046081 4.740000e-14 89.8
38 TraesCS4A01G003100 chr6A 88.000 75 7 2 2581 2654 615037492 615037419 1.710000e-13 87.9
39 TraesCS4A01G003100 chr3A 86.667 75 9 1 2582 2655 598979215 598979289 7.940000e-12 82.4
40 TraesCS4A01G003100 chr2B 94.872 39 1 1 2581 2619 67794007 67794044 3.720000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G003100 chr4A 2635157 2638607 3450 True 2953.5 5000 100.00000 1 3451 2 chr4A.!!$R2 3450
1 TraesCS4A01G003100 chr4A 2554864 2556259 1395 True 953.0 953 79.43500 1049 2430 1 chr4A.!!$R1 1381
2 TraesCS4A01G003100 chr4A 2737913 2738837 924 False 747.0 747 81.40300 1490 2423 1 chr4A.!!$F1 933
3 TraesCS4A01G003100 chr4A 2775105 2776034 929 False 745.0 745 81.30900 1492 2430 1 chr4A.!!$F2 938
4 TraesCS4A01G003100 chr4D 414628278 414629010 732 False 1072.0 1072 92.73400 2695 3451 1 chr4D.!!$F1 756
5 TraesCS4A01G003100 chr4D 469123399 469124113 714 True 950.0 950 90.22500 2695 3451 1 chr4D.!!$R3 756
6 TraesCS4A01G003100 chr4D 469072491 469075579 3088 True 833.5 2687 89.00975 84 2568 4 chr4D.!!$R4 2484
7 TraesCS4A01G003100 chr4D 468898461 468899385 924 True 808.0 808 82.53500 1490 2423 1 chr4D.!!$R2 933
8 TraesCS4A01G003100 chr4D 468861767 468862696 929 True 739.0 739 81.18400 1492 2430 1 chr4D.!!$R1 938
9 TraesCS4A01G003100 chr4B 588787130 588789464 2334 True 1396.0 2394 88.39400 84 2553 2 chr4B.!!$R1 2469
10 TraesCS4A01G003100 chr7A 100728378 100729133 755 False 1286.0 1286 97.35400 2696 3451 1 chr7A.!!$F1 755
11 TraesCS4A01G003100 chr7A 47602703 47603490 787 True 1133.0 1133 93.27400 2695 3451 1 chr7A.!!$R2 756
12 TraesCS4A01G003100 chr7A 732095060 732095793 733 False 1123.0 1123 93.93100 2694 3451 1 chr7A.!!$F2 757
13 TraesCS4A01G003100 chr7A 101432997 101434503 1506 False 506.0 745 81.21000 1046 2429 2 chr7A.!!$F3 1383
14 TraesCS4A01G003100 chr2D 11084062 11084795 733 False 1105.0 1105 93.53600 2695 3451 1 chr2D.!!$F1 756
15 TraesCS4A01G003100 chr2D 155541880 155542603 723 False 1048.0 1048 92.34800 2694 3451 1 chr2D.!!$F2 757
16 TraesCS4A01G003100 chr2D 97610480 97611217 737 True 1031.0 1031 91.73200 2695 3451 1 chr2D.!!$R1 756
17 TraesCS4A01G003100 chr2D 114808817 114809552 735 True 1002.0 1002 91.06400 2695 3451 1 chr2D.!!$R2 756
18 TraesCS4A01G003100 chr2D 636354741 636356167 1426 False 855.5 1219 89.89500 1039 2451 2 chr2D.!!$F4 1412
19 TraesCS4A01G003100 chr1A 534514211 534514947 736 False 1125.0 1125 93.92300 2695 3451 1 chr1A.!!$F1 756
20 TraesCS4A01G003100 chr1D 276505324 276506052 728 False 1055.0 1055 92.30800 2685 3451 1 chr1D.!!$F1 766
21 TraesCS4A01G003100 chr6D 445333696 445334427 731 True 1053.0 1053 92.33800 2695 3451 1 chr6D.!!$R1 756
22 TraesCS4A01G003100 chr5D 384192596 384193315 719 True 1031.0 1031 92.07400 2695 3451 1 chr5D.!!$R1 756

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
972 1968 0.029567 CTAGACATCGACCTCGTGCC 59.97 60.0 0.0 0.0 40.8 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2646 3801 0.31716 TTAGGTGGAGAGTGTGTGCG 59.683 55.0 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.595819 GCTGTTCAGCCCACATCC 58.404 61.111 13.11 0.00 0.00 3.51
19 20 2.048603 GCTGTTCAGCCCACATCCC 61.049 63.158 13.11 0.00 0.00 3.85
20 21 1.379916 CTGTTCAGCCCACATCCCA 59.620 57.895 0.00 0.00 0.00 4.37
21 22 0.251297 CTGTTCAGCCCACATCCCAA 60.251 55.000 0.00 0.00 0.00 4.12
22 23 0.539438 TGTTCAGCCCACATCCCAAC 60.539 55.000 0.00 0.00 0.00 3.77
23 24 1.303236 TTCAGCCCACATCCCAACG 60.303 57.895 0.00 0.00 0.00 4.10
24 25 3.443045 CAGCCCACATCCCAACGC 61.443 66.667 0.00 0.00 0.00 4.84
27 28 2.359354 CCCACATCCCAACGCGAA 60.359 61.111 15.93 0.00 0.00 4.70
28 29 2.686816 CCCACATCCCAACGCGAAC 61.687 63.158 15.93 0.00 0.00 3.95
30 31 2.024868 CACATCCCAACGCGAACGA 61.025 57.895 15.93 2.30 43.93 3.85
31 32 1.736645 ACATCCCAACGCGAACGAG 60.737 57.895 15.93 0.00 43.93 4.18
32 33 1.736645 CATCCCAACGCGAACGAGT 60.737 57.895 15.93 0.00 43.93 4.18
33 34 1.736645 ATCCCAACGCGAACGAGTG 60.737 57.895 15.93 0.15 43.93 3.51
34 35 2.430382 ATCCCAACGCGAACGAGTGT 62.430 55.000 15.93 0.00 43.93 3.55
35 36 2.654912 CCCAACGCGAACGAGTGTC 61.655 63.158 15.93 0.00 43.93 3.67
36 37 1.660575 CCAACGCGAACGAGTGTCT 60.661 57.895 15.93 0.00 43.93 3.41
37 38 1.482955 CAACGCGAACGAGTGTCTG 59.517 57.895 15.93 0.00 43.93 3.51
38 39 1.660575 AACGCGAACGAGTGTCTGG 60.661 57.895 15.93 0.00 43.93 3.86
39 40 3.470567 CGCGAACGAGTGTCTGGC 61.471 66.667 0.00 0.00 43.93 4.85
40 41 3.470567 GCGAACGAGTGTCTGGCG 61.471 66.667 0.00 0.00 0.00 5.69
41 42 2.254350 CGAACGAGTGTCTGGCGA 59.746 61.111 0.00 0.00 0.00 5.54
42 43 1.154016 CGAACGAGTGTCTGGCGAT 60.154 57.895 0.00 0.00 0.00 4.58
43 44 0.098200 CGAACGAGTGTCTGGCGATA 59.902 55.000 0.00 0.00 0.00 2.92
44 45 1.546834 GAACGAGTGTCTGGCGATAC 58.453 55.000 0.00 0.00 0.00 2.24
45 46 0.885879 AACGAGTGTCTGGCGATACA 59.114 50.000 0.00 0.00 34.10 2.29
46 47 0.452184 ACGAGTGTCTGGCGATACAG 59.548 55.000 0.00 0.00 39.84 2.74
47 48 0.452184 CGAGTGTCTGGCGATACAGT 59.548 55.000 8.36 0.00 39.48 3.55
48 49 1.795525 CGAGTGTCTGGCGATACAGTG 60.796 57.143 0.00 0.00 39.48 3.66
49 50 1.472878 GAGTGTCTGGCGATACAGTGA 59.527 52.381 0.00 0.00 39.48 3.41
50 51 1.474478 AGTGTCTGGCGATACAGTGAG 59.526 52.381 0.00 0.00 39.48 3.51
51 52 0.173481 TGTCTGGCGATACAGTGAGC 59.827 55.000 0.00 0.00 39.48 4.26
52 53 0.173481 GTCTGGCGATACAGTGAGCA 59.827 55.000 0.00 0.00 39.48 4.26
53 54 0.457443 TCTGGCGATACAGTGAGCAG 59.543 55.000 0.00 0.00 39.48 4.24
54 55 0.529337 CTGGCGATACAGTGAGCAGG 60.529 60.000 0.00 0.00 33.81 4.85
55 56 1.884926 GGCGATACAGTGAGCAGGC 60.885 63.158 0.00 0.00 0.00 4.85
56 57 2.233654 GCGATACAGTGAGCAGGCG 61.234 63.158 0.00 0.00 0.00 5.52
57 58 2.233654 CGATACAGTGAGCAGGCGC 61.234 63.158 0.00 0.00 38.99 6.53
58 59 2.202797 ATACAGTGAGCAGGCGCG 60.203 61.111 0.00 0.00 45.49 6.86
76 77 2.736995 CTCGTCCGCGCTTTGGAA 60.737 61.111 5.56 0.00 37.23 3.53
77 78 2.047655 TCGTCCGCGCTTTGGAAT 60.048 55.556 5.56 0.00 37.23 3.01
78 79 1.635663 CTCGTCCGCGCTTTGGAATT 61.636 55.000 5.56 0.00 37.23 2.17
79 80 1.209127 CGTCCGCGCTTTGGAATTT 59.791 52.632 5.56 0.00 37.23 1.82
80 81 0.386731 CGTCCGCGCTTTGGAATTTT 60.387 50.000 5.56 0.00 37.23 1.82
81 82 1.336877 GTCCGCGCTTTGGAATTTTC 58.663 50.000 5.56 0.00 37.23 2.29
82 83 0.109964 TCCGCGCTTTGGAATTTTCG 60.110 50.000 5.56 0.00 30.98 3.46
205 206 0.250295 CTTCCTTTGACCAGTCGCCA 60.250 55.000 0.00 0.00 0.00 5.69
209 210 0.036010 CTTTGACCAGTCGCCATCCT 60.036 55.000 0.00 0.00 0.00 3.24
214 215 1.153289 CCAGTCGCCATCCTTCAGG 60.153 63.158 0.00 0.00 0.00 3.86
215 216 1.599047 CAGTCGCCATCCTTCAGGT 59.401 57.895 0.00 0.00 36.34 4.00
216 217 0.824109 CAGTCGCCATCCTTCAGGTA 59.176 55.000 0.00 0.00 36.34 3.08
221 222 2.032620 CGCCATCCTTCAGGTAGTACT 58.967 52.381 0.00 0.00 36.34 2.73
237 238 8.569641 CAGGTAGTACTACAGAATATGAGTTCC 58.430 40.741 29.38 10.91 37.78 3.62
238 239 8.504409 AGGTAGTACTACAGAATATGAGTTCCT 58.496 37.037 29.38 12.79 37.78 3.36
254 255 3.126831 GTTCCTCGGATCTGCATGTTAG 58.873 50.000 0.00 0.00 0.00 2.34
255 256 1.069204 TCCTCGGATCTGCATGTTAGC 59.931 52.381 0.00 0.00 0.00 3.09
256 257 1.202568 CCTCGGATCTGCATGTTAGCA 60.203 52.381 0.00 0.00 43.35 3.49
274 289 1.519408 CAGTTACCAGGAAACACCGG 58.481 55.000 0.00 0.00 44.74 5.28
282 297 3.781162 GAAACACCGGCGCCGTAC 61.781 66.667 43.12 24.06 37.81 3.67
319 1152 6.914665 TGATTAGATTGGGTTGATGGATCTT 58.085 36.000 0.00 0.00 0.00 2.40
321 1154 4.598036 AGATTGGGTTGATGGATCTTGT 57.402 40.909 0.00 0.00 0.00 3.16
344 1177 3.002451 CAGTAGTCCTACGGATCAAGACG 59.998 52.174 0.00 0.00 40.80 4.18
383 1248 2.049433 CCCGTGAGTGTGTCCGTC 60.049 66.667 0.00 0.00 0.00 4.79
387 1252 1.066918 GTGAGTGTGTCCGTCCGTT 59.933 57.895 0.00 0.00 0.00 4.44
388 1253 0.938168 GTGAGTGTGTCCGTCCGTTC 60.938 60.000 0.00 0.00 0.00 3.95
389 1254 1.728426 GAGTGTGTCCGTCCGTTCG 60.728 63.158 0.00 0.00 0.00 3.95
390 1255 3.400590 GTGTGTCCGTCCGTTCGC 61.401 66.667 0.00 0.00 0.00 4.70
434 1299 4.340617 GTCCAAAATGATTGGTGGGTAGA 58.659 43.478 7.07 0.00 40.40 2.59
435 1300 4.770010 GTCCAAAATGATTGGTGGGTAGAA 59.230 41.667 7.07 0.00 40.40 2.10
439 1304 6.127730 CCAAAATGATTGGTGGGTAGAAGTAC 60.128 42.308 0.00 0.00 34.92 2.73
440 1305 5.772393 AATGATTGGTGGGTAGAAGTACA 57.228 39.130 0.00 0.00 0.00 2.90
441 1306 5.975988 ATGATTGGTGGGTAGAAGTACAT 57.024 39.130 0.00 0.00 0.00 2.29
442 1307 7.446106 AATGATTGGTGGGTAGAAGTACATA 57.554 36.000 0.00 0.00 0.00 2.29
443 1308 6.229936 TGATTGGTGGGTAGAAGTACATAC 57.770 41.667 0.00 0.00 0.00 2.39
444 1309 5.722441 TGATTGGTGGGTAGAAGTACATACA 59.278 40.000 0.00 0.00 0.00 2.29
445 1310 6.385759 TGATTGGTGGGTAGAAGTACATACAT 59.614 38.462 0.00 0.00 0.00 2.29
446 1311 5.607939 TGGTGGGTAGAAGTACATACATG 57.392 43.478 0.00 0.00 0.00 3.21
473 1350 1.654137 CCAAGAAACGTGCGTGCAC 60.654 57.895 14.81 14.81 43.01 4.57
487 1364 4.057428 GCACTGACTCGGCGGTCT 62.057 66.667 22.60 7.10 37.16 3.85
785 1662 3.031736 AGAGAGAGAGAGAGCGTAGACT 58.968 50.000 0.00 0.00 0.00 3.24
848 1725 4.522689 ATGGTGGACGCGCGCATA 62.523 61.111 32.58 13.56 0.00 3.14
881 1868 4.394300 GGAGCTCTATATAAGCGGACGTAA 59.606 45.833 14.64 0.00 44.59 3.18
941 1937 3.190874 GAGTTCATCGGCCTCTTTGTAG 58.809 50.000 0.00 0.00 0.00 2.74
942 1938 2.832129 AGTTCATCGGCCTCTTTGTAGA 59.168 45.455 0.00 0.00 0.00 2.59
958 1954 7.773149 TCTTTGTAGAAAGGTGATAGCTAGAC 58.227 38.462 12.06 0.00 39.36 2.59
972 1968 0.029567 CTAGACATCGACCTCGTGCC 59.970 60.000 0.00 0.00 40.80 5.01
973 1969 1.381928 TAGACATCGACCTCGTGCCC 61.382 60.000 0.00 0.00 40.80 5.36
974 1970 4.129737 ACATCGACCTCGTGCCCG 62.130 66.667 0.00 0.00 40.80 6.13
982 1978 2.511373 CTCGTGCCCGCTTGCATA 60.511 61.111 0.14 0.00 44.30 3.14
1017 2013 4.250464 CAGAAATGGAGGTTAACTACGCA 58.750 43.478 5.42 1.99 30.06 5.24
1023 2019 2.269172 GAGGTTAACTACGCAGAAGCC 58.731 52.381 5.42 0.00 37.52 4.35
1034 2033 3.570212 AGAAGCCGGCCAGGTTGT 61.570 61.111 26.15 6.37 43.70 3.32
1418 2450 0.944311 GTGCCGTCACGTCACATTCT 60.944 55.000 6.47 0.00 32.98 2.40
1428 2552 5.739630 GTCACGTCACATTCTCATAGTACTG 59.260 44.000 5.39 0.00 0.00 2.74
1460 2588 4.021280 TGCATGCAGTGGTTTTGATTGTAT 60.021 37.500 18.46 0.00 0.00 2.29
1484 2626 5.163426 TGGAGTGCTGATGTGTTTTTCAATT 60.163 36.000 0.00 0.00 0.00 2.32
1486 2628 6.363357 GGAGTGCTGATGTGTTTTTCAATTAC 59.637 38.462 0.00 0.00 0.00 1.89
1487 2629 7.042797 AGTGCTGATGTGTTTTTCAATTACT 57.957 32.000 0.00 0.00 0.00 2.24
1488 2630 7.141363 AGTGCTGATGTGTTTTTCAATTACTC 58.859 34.615 0.00 0.00 0.00 2.59
1508 2650 0.541063 TACAGGAGAGCGTTGGACCA 60.541 55.000 0.00 0.00 0.00 4.02
1747 2894 1.084370 CGGTCCATCGAGTTCAAGGC 61.084 60.000 0.00 0.00 0.00 4.35
1748 2895 0.036388 GGTCCATCGAGTTCAAGGCA 60.036 55.000 0.00 0.00 0.00 4.75
1813 2963 4.639078 TGGACAAGATCAGGAACATCAA 57.361 40.909 0.00 0.00 0.00 2.57
1841 2991 3.257561 CCGGCAGAGTTCATCGCG 61.258 66.667 0.00 0.00 0.00 5.87
1909 3059 3.712881 GGCGCACGTGTGGAAGAC 61.713 66.667 28.77 12.59 0.00 3.01
2051 3201 3.003173 TTCCCGAGGCTCCAGGTG 61.003 66.667 15.72 4.87 0.00 4.00
2273 3427 1.672356 CCACCAGCTCGACTTTGGG 60.672 63.158 9.25 0.00 36.28 4.12
2438 3592 2.016905 ACTCCCTGGATATTCTCCCG 57.983 55.000 0.00 0.00 44.23 5.14
2490 3644 0.997196 GCGGTCGTTCTATGGTCAAC 59.003 55.000 0.00 0.00 0.00 3.18
2571 3726 5.854431 TTTTCTTTGGCAAACAAACAGAC 57.146 34.783 12.09 0.00 43.81 3.51
2572 3727 4.527509 TTCTTTGGCAAACAAACAGACA 57.472 36.364 8.93 0.00 43.81 3.41
2573 3728 3.843999 TCTTTGGCAAACAAACAGACAC 58.156 40.909 8.93 0.00 43.81 3.67
2574 3729 3.256879 TCTTTGGCAAACAAACAGACACA 59.743 39.130 8.93 0.00 43.81 3.72
2575 3730 3.667497 TTGGCAAACAAACAGACACAA 57.333 38.095 0.00 0.00 35.79 3.33
2576 3731 3.667497 TGGCAAACAAACAGACACAAA 57.333 38.095 0.00 0.00 0.00 2.83
2577 3732 3.321497 TGGCAAACAAACAGACACAAAC 58.679 40.909 0.00 0.00 0.00 2.93
2578 3733 2.670905 GGCAAACAAACAGACACAAACC 59.329 45.455 0.00 0.00 0.00 3.27
2579 3734 2.344142 GCAAACAAACAGACACAAACCG 59.656 45.455 0.00 0.00 0.00 4.44
2580 3735 3.827625 CAAACAAACAGACACAAACCGA 58.172 40.909 0.00 0.00 0.00 4.69
2581 3736 4.420168 CAAACAAACAGACACAAACCGAT 58.580 39.130 0.00 0.00 0.00 4.18
2582 3737 4.712122 AACAAACAGACACAAACCGATT 57.288 36.364 0.00 0.00 0.00 3.34
2583 3738 4.712122 ACAAACAGACACAAACCGATTT 57.288 36.364 0.00 0.00 0.00 2.17
2584 3739 5.066968 ACAAACAGACACAAACCGATTTT 57.933 34.783 0.00 0.00 0.00 1.82
2585 3740 5.474825 ACAAACAGACACAAACCGATTTTT 58.525 33.333 0.00 0.00 0.00 1.94
2586 3741 5.347364 ACAAACAGACACAAACCGATTTTTG 59.653 36.000 0.00 0.00 41.47 2.44
2588 3743 5.066968 ACAGACACAAACCGATTTTTGTT 57.933 34.783 0.00 0.00 45.45 2.83
2589 3744 5.474825 ACAGACACAAACCGATTTTTGTTT 58.525 33.333 0.00 0.00 45.45 2.83
2590 3745 5.575218 ACAGACACAAACCGATTTTTGTTTC 59.425 36.000 0.00 5.62 45.45 2.78
2591 3746 5.574830 CAGACACAAACCGATTTTTGTTTCA 59.425 36.000 17.83 0.00 45.45 2.69
2592 3747 6.090088 CAGACACAAACCGATTTTTGTTTCAA 59.910 34.615 17.83 0.00 45.45 2.69
2593 3748 6.090223 AGACACAAACCGATTTTTGTTTCAAC 59.910 34.615 17.83 0.00 45.45 3.18
2594 3749 5.696724 ACACAAACCGATTTTTGTTTCAACA 59.303 32.000 6.93 0.00 45.45 3.33
2595 3750 6.370166 ACACAAACCGATTTTTGTTTCAACAT 59.630 30.769 6.93 0.00 45.45 2.71
2596 3751 6.899243 CACAAACCGATTTTTGTTTCAACATC 59.101 34.615 6.93 0.00 45.45 3.06
2597 3752 6.591834 ACAAACCGATTTTTGTTTCAACATCA 59.408 30.769 4.50 0.00 45.45 3.07
2598 3753 6.826893 AACCGATTTTTGTTTCAACATCAG 57.173 33.333 0.00 0.00 38.95 2.90
2599 3754 5.901552 ACCGATTTTTGTTTCAACATCAGT 58.098 33.333 0.00 0.00 38.95 3.41
2600 3755 7.033530 ACCGATTTTTGTTTCAACATCAGTA 57.966 32.000 0.00 0.00 38.95 2.74
2601 3756 6.915843 ACCGATTTTTGTTTCAACATCAGTAC 59.084 34.615 0.00 0.00 38.95 2.73
2602 3757 6.915300 CCGATTTTTGTTTCAACATCAGTACA 59.085 34.615 0.00 0.00 38.95 2.90
2603 3758 7.113404 CCGATTTTTGTTTCAACATCAGTACAG 59.887 37.037 0.00 0.00 38.95 2.74
2604 3759 7.855409 CGATTTTTGTTTCAACATCAGTACAGA 59.145 33.333 0.00 0.00 38.95 3.41
2605 3760 8.856490 ATTTTTGTTTCAACATCAGTACAGAC 57.144 30.769 0.00 0.00 38.95 3.51
2606 3761 6.993786 TTTGTTTCAACATCAGTACAGACA 57.006 33.333 0.00 0.00 38.95 3.41
2607 3762 5.984233 TGTTTCAACATCAGTACAGACAC 57.016 39.130 0.00 0.00 33.17 3.67
2608 3763 5.423886 TGTTTCAACATCAGTACAGACACA 58.576 37.500 0.00 0.00 33.17 3.72
2609 3764 5.877564 TGTTTCAACATCAGTACAGACACAA 59.122 36.000 0.00 0.00 33.17 3.33
2610 3765 6.372937 TGTTTCAACATCAGTACAGACACAAA 59.627 34.615 0.00 0.00 33.17 2.83
2611 3766 5.984233 TCAACATCAGTACAGACACAAAC 57.016 39.130 0.00 0.00 0.00 2.93
2612 3767 4.506288 TCAACATCAGTACAGACACAAACG 59.494 41.667 0.00 0.00 0.00 3.60
2613 3768 2.800544 ACATCAGTACAGACACAAACGC 59.199 45.455 0.00 0.00 0.00 4.84
2614 3769 2.882927 TCAGTACAGACACAAACGCT 57.117 45.000 0.00 0.00 0.00 5.07
2615 3770 3.173668 TCAGTACAGACACAAACGCTT 57.826 42.857 0.00 0.00 0.00 4.68
2616 3771 4.310357 TCAGTACAGACACAAACGCTTA 57.690 40.909 0.00 0.00 0.00 3.09
2617 3772 4.878439 TCAGTACAGACACAAACGCTTAT 58.122 39.130 0.00 0.00 0.00 1.73
2618 3773 6.016213 TCAGTACAGACACAAACGCTTATA 57.984 37.500 0.00 0.00 0.00 0.98
2619 3774 6.627243 TCAGTACAGACACAAACGCTTATAT 58.373 36.000 0.00 0.00 0.00 0.86
2620 3775 7.764331 TCAGTACAGACACAAACGCTTATATA 58.236 34.615 0.00 0.00 0.00 0.86
2621 3776 8.410912 TCAGTACAGACACAAACGCTTATATAT 58.589 33.333 0.00 0.00 0.00 0.86
2622 3777 9.673454 CAGTACAGACACAAACGCTTATATATA 57.327 33.333 0.00 0.00 0.00 0.86
2623 3778 9.674824 AGTACAGACACAAACGCTTATATATAC 57.325 33.333 0.00 0.00 0.00 1.47
2624 3779 7.618964 ACAGACACAAACGCTTATATATACG 57.381 36.000 0.00 0.00 0.00 3.06
2625 3780 7.198390 ACAGACACAAACGCTTATATATACGT 58.802 34.615 0.00 0.00 41.16 3.57
2626 3781 7.166970 ACAGACACAAACGCTTATATATACGTG 59.833 37.037 10.30 8.29 39.00 4.49
2627 3782 6.143438 AGACACAAACGCTTATATATACGTGC 59.857 38.462 10.30 5.65 39.00 5.34
2628 3783 5.749588 ACACAAACGCTTATATATACGTGCA 59.250 36.000 10.30 0.00 39.00 4.57
2629 3784 6.422701 ACACAAACGCTTATATATACGTGCAT 59.577 34.615 10.30 0.00 39.00 3.96
2630 3785 7.595875 ACACAAACGCTTATATATACGTGCATA 59.404 33.333 10.30 0.00 39.00 3.14
2631 3786 7.891220 CACAAACGCTTATATATACGTGCATAC 59.109 37.037 10.30 0.00 39.00 2.39
2632 3787 7.595875 ACAAACGCTTATATATACGTGCATACA 59.404 33.333 10.30 0.00 39.00 2.29
2633 3788 7.502177 AACGCTTATATATACGTGCATACAC 57.498 36.000 10.30 0.00 43.76 2.90
2634 3789 6.849502 ACGCTTATATATACGTGCATACACT 58.150 36.000 9.13 0.00 45.10 3.55
2635 3790 6.965500 ACGCTTATATATACGTGCATACACTC 59.035 38.462 9.13 0.00 45.10 3.51
2636 3791 6.964934 CGCTTATATATACGTGCATACACTCA 59.035 38.462 0.00 0.00 45.10 3.41
2637 3792 7.644157 CGCTTATATATACGTGCATACACTCAT 59.356 37.037 0.00 0.00 45.10 2.90
2638 3793 8.959058 GCTTATATATACGTGCATACACTCATC 58.041 37.037 0.00 0.00 45.10 2.92
2639 3794 9.452065 CTTATATATACGTGCATACACTCATCC 57.548 37.037 0.00 0.00 45.10 3.51
2640 3795 2.882927 TACGTGCATACACTCATCCC 57.117 50.000 0.00 0.00 45.10 3.85
2641 3796 0.901827 ACGTGCATACACTCATCCCA 59.098 50.000 0.00 0.00 45.10 4.37
2642 3797 1.486310 ACGTGCATACACTCATCCCAT 59.514 47.619 0.00 0.00 45.10 4.00
2643 3798 1.869132 CGTGCATACACTCATCCCATG 59.131 52.381 0.00 0.00 45.10 3.66
2644 3799 2.483538 CGTGCATACACTCATCCCATGA 60.484 50.000 0.00 0.00 45.10 3.07
2645 3800 2.874701 GTGCATACACTCATCCCATGAC 59.125 50.000 0.00 0.00 43.85 3.06
2646 3801 2.158769 TGCATACACTCATCCCATGACC 60.159 50.000 0.00 0.00 35.06 4.02
2647 3802 2.759191 CATACACTCATCCCATGACCG 58.241 52.381 0.00 0.00 35.06 4.79
2648 3803 0.464036 TACACTCATCCCATGACCGC 59.536 55.000 0.00 0.00 35.06 5.68
2649 3804 1.221566 CACTCATCCCATGACCGCA 59.778 57.895 0.00 0.00 35.06 5.69
2650 3805 1.091771 CACTCATCCCATGACCGCAC 61.092 60.000 0.00 0.00 35.06 5.34
2651 3806 1.221566 CTCATCCCATGACCGCACA 59.778 57.895 0.00 0.00 35.06 4.57
2652 3807 1.078497 TCATCCCATGACCGCACAC 60.078 57.895 0.00 0.00 33.59 3.82
2653 3808 1.377072 CATCCCATGACCGCACACA 60.377 57.895 0.00 0.00 0.00 3.72
2654 3809 1.377202 ATCCCATGACCGCACACAC 60.377 57.895 0.00 0.00 0.00 3.82
2655 3810 1.841302 ATCCCATGACCGCACACACT 61.841 55.000 0.00 0.00 0.00 3.55
2656 3811 2.034879 CCCATGACCGCACACACTC 61.035 63.158 0.00 0.00 0.00 3.51
2657 3812 1.004560 CCATGACCGCACACACTCT 60.005 57.895 0.00 0.00 0.00 3.24
2658 3813 1.016130 CCATGACCGCACACACTCTC 61.016 60.000 0.00 0.00 0.00 3.20
2659 3814 1.016130 CATGACCGCACACACTCTCC 61.016 60.000 0.00 0.00 0.00 3.71
2660 3815 1.471829 ATGACCGCACACACTCTCCA 61.472 55.000 0.00 0.00 0.00 3.86
2661 3816 1.664965 GACCGCACACACTCTCCAC 60.665 63.158 0.00 0.00 0.00 4.02
2662 3817 2.357517 CCGCACACACTCTCCACC 60.358 66.667 0.00 0.00 0.00 4.61
2663 3818 2.737180 CGCACACACTCTCCACCT 59.263 61.111 0.00 0.00 0.00 4.00
2664 3819 1.532604 CCGCACACACTCTCCACCTA 61.533 60.000 0.00 0.00 0.00 3.08
2665 3820 0.317160 CGCACACACTCTCCACCTAA 59.683 55.000 0.00 0.00 0.00 2.69
2666 3821 1.797025 GCACACACTCTCCACCTAAC 58.203 55.000 0.00 0.00 0.00 2.34
2667 3822 1.608283 GCACACACTCTCCACCTAACC 60.608 57.143 0.00 0.00 0.00 2.85
2668 3823 1.691976 CACACACTCTCCACCTAACCA 59.308 52.381 0.00 0.00 0.00 3.67
2669 3824 2.303022 CACACACTCTCCACCTAACCAT 59.697 50.000 0.00 0.00 0.00 3.55
2670 3825 2.567615 ACACACTCTCCACCTAACCATC 59.432 50.000 0.00 0.00 0.00 3.51
2671 3826 2.093447 CACACTCTCCACCTAACCATCC 60.093 54.545 0.00 0.00 0.00 3.51
2672 3827 2.187958 CACTCTCCACCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
2673 3828 2.571653 CACTCTCCACCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
2674 3829 2.572104 ACTCTCCACCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
2675 3830 1.913419 TCTCCACCTAACCATCCAACC 59.087 52.381 0.00 0.00 0.00 3.77
2676 3831 1.633432 CTCCACCTAACCATCCAACCA 59.367 52.381 0.00 0.00 0.00 3.67
2677 3832 1.353022 TCCACCTAACCATCCAACCAC 59.647 52.381 0.00 0.00 0.00 4.16
2678 3833 1.074727 CCACCTAACCATCCAACCACA 59.925 52.381 0.00 0.00 0.00 4.17
2679 3834 2.159382 CACCTAACCATCCAACCACAC 58.841 52.381 0.00 0.00 0.00 3.82
2680 3835 1.777878 ACCTAACCATCCAACCACACA 59.222 47.619 0.00 0.00 0.00 3.72
2681 3836 2.224769 ACCTAACCATCCAACCACACAG 60.225 50.000 0.00 0.00 0.00 3.66
2682 3837 2.224769 CCTAACCATCCAACCACACAGT 60.225 50.000 0.00 0.00 0.00 3.55
2683 3838 2.452600 AACCATCCAACCACACAGTT 57.547 45.000 0.00 0.00 0.00 3.16
2684 3839 2.452600 ACCATCCAACCACACAGTTT 57.547 45.000 0.00 0.00 0.00 2.66
2685 3840 2.031120 ACCATCCAACCACACAGTTTG 58.969 47.619 0.00 0.00 0.00 2.93
2686 3841 1.340889 CCATCCAACCACACAGTTTGG 59.659 52.381 4.00 4.00 40.32 3.28
2692 3847 1.261480 ACCACACAGTTTGGTTTGCA 58.739 45.000 5.47 0.00 45.62 4.08
2798 3954 4.766404 AAAATCTCTTAACCCGTTGCAG 57.234 40.909 0.00 0.00 0.00 4.41
2825 3981 0.394938 TGAACAGCCGTTTAGCCTCA 59.605 50.000 0.00 0.00 34.75 3.86
2996 4256 1.528309 CGCTCCCCTCTCCTCTCTC 60.528 68.421 0.00 0.00 0.00 3.20
2997 4257 1.528309 GCTCCCCTCTCCTCTCTCG 60.528 68.421 0.00 0.00 0.00 4.04
2998 4258 1.919771 CTCCCCTCTCCTCTCTCGT 59.080 63.158 0.00 0.00 0.00 4.18
2999 4259 0.179029 CTCCCCTCTCCTCTCTCGTC 60.179 65.000 0.00 0.00 0.00 4.20
3000 4260 1.152839 CCCCTCTCCTCTCTCGTCC 60.153 68.421 0.00 0.00 0.00 4.79
3001 4261 1.152839 CCCTCTCCTCTCTCGTCCC 60.153 68.421 0.00 0.00 0.00 4.46
3002 4262 1.525077 CCTCTCCTCTCTCGTCCCG 60.525 68.421 0.00 0.00 0.00 5.14
3003 4263 2.124653 TCTCCTCTCTCGTCCCGC 60.125 66.667 0.00 0.00 0.00 6.13
3004 4264 2.124487 CTCCTCTCTCGTCCCGCT 60.124 66.667 0.00 0.00 0.00 5.52
3005 4265 2.124653 TCCTCTCTCGTCCCGCTC 60.125 66.667 0.00 0.00 0.00 5.03
3006 4266 3.213402 CCTCTCTCGTCCCGCTCC 61.213 72.222 0.00 0.00 0.00 4.70
3007 4267 3.213402 CTCTCTCGTCCCGCTCCC 61.213 72.222 0.00 0.00 0.00 4.30
3008 4268 4.816984 TCTCTCGTCCCGCTCCCC 62.817 72.222 0.00 0.00 0.00 4.81
3009 4269 4.824515 CTCTCGTCCCGCTCCCCT 62.825 72.222 0.00 0.00 0.00 4.79
3010 4270 4.816984 TCTCGTCCCGCTCCCCTC 62.817 72.222 0.00 0.00 0.00 4.30
3011 4271 4.824515 CTCGTCCCGCTCCCCTCT 62.825 72.222 0.00 0.00 0.00 3.69
3012 4272 4.816984 TCGTCCCGCTCCCCTCTC 62.817 72.222 0.00 0.00 0.00 3.20
3014 4274 4.467107 GTCCCGCTCCCCTCTCCT 62.467 72.222 0.00 0.00 0.00 3.69
3015 4275 4.144727 TCCCGCTCCCCTCTCCTC 62.145 72.222 0.00 0.00 0.00 3.71
3016 4276 4.150454 CCCGCTCCCCTCTCCTCT 62.150 72.222 0.00 0.00 0.00 3.69
3017 4277 2.520741 CCGCTCCCCTCTCCTCTC 60.521 72.222 0.00 0.00 0.00 3.20
3018 4278 2.600731 CGCTCCCCTCTCCTCTCT 59.399 66.667 0.00 0.00 0.00 3.10
3204 4498 3.672511 CGCCGTCTTACTGTGTTGAGTAT 60.673 47.826 0.00 0.00 0.00 2.12
3238 4532 0.389426 GTTCGCTAAGGCCGTGAAGA 60.389 55.000 0.00 0.00 32.19 2.87
3244 4538 3.010420 GCTAAGGCCGTGAAGAAAGATT 58.990 45.455 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.586154 CGTTGGGATGTGGGCTGAAC 61.586 60.000 0.00 0.00 0.00 3.18
6 7 2.350895 CGTTGGGATGTGGGCTGA 59.649 61.111 0.00 0.00 0.00 4.26
10 11 2.359354 TTCGCGTTGGGATGTGGG 60.359 61.111 5.77 0.00 0.00 4.61
11 12 2.867472 GTTCGCGTTGGGATGTGG 59.133 61.111 5.77 0.00 0.00 4.17
12 13 1.955529 CTCGTTCGCGTTGGGATGTG 61.956 60.000 5.77 0.00 42.11 3.21
13 14 1.736645 CTCGTTCGCGTTGGGATGT 60.737 57.895 5.77 0.00 42.11 3.06
14 15 1.736645 ACTCGTTCGCGTTGGGATG 60.737 57.895 5.77 0.00 42.11 3.51
15 16 1.736645 CACTCGTTCGCGTTGGGAT 60.737 57.895 5.77 0.00 42.11 3.85
16 17 2.355363 CACTCGTTCGCGTTGGGA 60.355 61.111 5.77 0.00 42.11 4.37
17 18 2.654912 GACACTCGTTCGCGTTGGG 61.655 63.158 5.77 0.00 42.11 4.12
18 19 1.660575 AGACACTCGTTCGCGTTGG 60.661 57.895 5.77 0.00 42.11 3.77
19 20 1.482955 CAGACACTCGTTCGCGTTG 59.517 57.895 5.77 0.00 42.11 4.10
20 21 1.660575 CCAGACACTCGTTCGCGTT 60.661 57.895 5.77 0.00 42.11 4.84
21 22 2.050351 CCAGACACTCGTTCGCGT 60.050 61.111 5.77 0.00 42.11 6.01
22 23 3.470567 GCCAGACACTCGTTCGCG 61.471 66.667 0.00 0.00 42.98 5.87
23 24 3.470567 CGCCAGACACTCGTTCGC 61.471 66.667 0.00 0.00 0.00 4.70
24 25 0.098200 TATCGCCAGACACTCGTTCG 59.902 55.000 0.00 0.00 0.00 3.95
25 26 1.135489 TGTATCGCCAGACACTCGTTC 60.135 52.381 0.00 0.00 0.00 3.95
26 27 0.885879 TGTATCGCCAGACACTCGTT 59.114 50.000 0.00 0.00 0.00 3.85
27 28 0.452184 CTGTATCGCCAGACACTCGT 59.548 55.000 0.00 0.00 34.23 4.18
28 29 0.452184 ACTGTATCGCCAGACACTCG 59.548 55.000 3.99 0.00 36.30 4.18
29 30 1.472878 TCACTGTATCGCCAGACACTC 59.527 52.381 3.99 0.00 36.30 3.51
30 31 1.474478 CTCACTGTATCGCCAGACACT 59.526 52.381 3.99 0.00 36.30 3.55
31 32 1.914634 CTCACTGTATCGCCAGACAC 58.085 55.000 3.99 0.00 36.30 3.67
32 33 0.173481 GCTCACTGTATCGCCAGACA 59.827 55.000 3.99 0.00 36.30 3.41
33 34 0.173481 TGCTCACTGTATCGCCAGAC 59.827 55.000 3.99 0.00 36.30 3.51
34 35 0.457443 CTGCTCACTGTATCGCCAGA 59.543 55.000 3.99 0.00 36.30 3.86
35 36 0.529337 CCTGCTCACTGTATCGCCAG 60.529 60.000 0.00 0.00 38.45 4.85
36 37 1.517361 CCTGCTCACTGTATCGCCA 59.483 57.895 0.00 0.00 0.00 5.69
37 38 1.884926 GCCTGCTCACTGTATCGCC 60.885 63.158 0.00 0.00 0.00 5.54
38 39 2.233654 CGCCTGCTCACTGTATCGC 61.234 63.158 0.00 0.00 0.00 4.58
39 40 2.233654 GCGCCTGCTCACTGTATCG 61.234 63.158 0.00 0.00 38.39 2.92
40 41 2.233654 CGCGCCTGCTCACTGTATC 61.234 63.158 0.00 0.00 39.65 2.24
41 42 2.202797 CGCGCCTGCTCACTGTAT 60.203 61.111 0.00 0.00 39.65 2.29
59 60 1.635663 AATTCCAAAGCGCGGACGAG 61.636 55.000 8.83 0.00 43.93 4.18
60 61 1.231958 AAATTCCAAAGCGCGGACGA 61.232 50.000 8.83 0.00 43.93 4.20
61 62 0.386731 AAAATTCCAAAGCGCGGACG 60.387 50.000 8.83 0.00 44.07 4.79
62 63 1.336877 GAAAATTCCAAAGCGCGGAC 58.663 50.000 8.83 0.00 30.29 4.79
63 64 0.109964 CGAAAATTCCAAAGCGCGGA 60.110 50.000 8.83 0.00 0.00 5.54
64 65 1.070471 CCGAAAATTCCAAAGCGCGG 61.070 55.000 8.83 0.00 0.00 6.46
65 66 1.070471 CCCGAAAATTCCAAAGCGCG 61.070 55.000 0.00 0.00 0.00 6.86
66 67 0.735978 CCCCGAAAATTCCAAAGCGC 60.736 55.000 0.00 0.00 0.00 5.92
67 68 0.601057 ACCCCGAAAATTCCAAAGCG 59.399 50.000 0.00 0.00 0.00 4.68
68 69 1.337728 CCACCCCGAAAATTCCAAAGC 60.338 52.381 0.00 0.00 0.00 3.51
69 70 1.275010 CCCACCCCGAAAATTCCAAAG 59.725 52.381 0.00 0.00 0.00 2.77
70 71 1.343069 CCCACCCCGAAAATTCCAAA 58.657 50.000 0.00 0.00 0.00 3.28
71 72 1.188871 GCCCACCCCGAAAATTCCAA 61.189 55.000 0.00 0.00 0.00 3.53
72 73 1.608046 GCCCACCCCGAAAATTCCA 60.608 57.895 0.00 0.00 0.00 3.53
73 74 1.608046 TGCCCACCCCGAAAATTCC 60.608 57.895 0.00 0.00 0.00 3.01
74 75 1.182385 TGTGCCCACCCCGAAAATTC 61.182 55.000 0.00 0.00 0.00 2.17
75 76 1.152440 TGTGCCCACCCCGAAAATT 60.152 52.632 0.00 0.00 0.00 1.82
76 77 1.606313 CTGTGCCCACCCCGAAAAT 60.606 57.895 0.00 0.00 0.00 1.82
77 78 2.203422 CTGTGCCCACCCCGAAAA 60.203 61.111 0.00 0.00 0.00 2.29
78 79 4.966787 GCTGTGCCCACCCCGAAA 62.967 66.667 0.00 0.00 0.00 3.46
99 100 1.954146 GCGCACAACTTGTCTCGGA 60.954 57.895 0.30 0.00 0.00 4.55
128 129 1.595929 TCCGGGAGACAAAACGTGC 60.596 57.895 0.00 0.00 0.00 5.34
205 206 9.303116 CATATTCTGTAGTACTACCTGAAGGAT 57.697 37.037 27.24 21.13 38.94 3.24
209 210 9.696572 AACTCATATTCTGTAGTACTACCTGAA 57.303 33.333 26.41 26.42 35.26 3.02
237 238 2.229675 TGCTAACATGCAGATCCGAG 57.770 50.000 0.00 0.00 38.12 4.63
254 255 0.872388 CGGTGTTTCCTGGTAACTGC 59.128 55.000 15.81 9.37 37.61 4.40
255 256 1.519408 CCGGTGTTTCCTGGTAACTG 58.481 55.000 15.81 7.07 37.61 3.16
256 257 0.250597 GCCGGTGTTTCCTGGTAACT 60.251 55.000 15.81 0.00 34.18 2.24
282 297 3.838244 TCTAATCAACCCATTCCGAGG 57.162 47.619 0.00 0.00 0.00 4.63
284 299 4.460263 CCAATCTAATCAACCCATTCCGA 58.540 43.478 0.00 0.00 0.00 4.55
285 300 3.569701 CCCAATCTAATCAACCCATTCCG 59.430 47.826 0.00 0.00 0.00 4.30
287 302 5.656416 TCAACCCAATCTAATCAACCCATTC 59.344 40.000 0.00 0.00 0.00 2.67
295 311 6.520021 AGATCCATCAACCCAATCTAATCA 57.480 37.500 0.00 0.00 0.00 2.57
344 1177 1.002792 GTTGAACTTGAACGGCCACTC 60.003 52.381 2.24 0.00 0.00 3.51
473 1350 2.403987 CGTAGACCGCCGAGTCAG 59.596 66.667 8.13 0.00 39.34 3.51
744 1621 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
745 1622 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
746 1623 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
747 1624 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
748 1625 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
749 1626 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
750 1627 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
751 1628 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
752 1629 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
753 1630 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
754 1631 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
755 1632 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
756 1633 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
757 1634 3.551863 CGCTCTCTCTCTCTCTCTCTCTC 60.552 56.522 0.00 0.00 0.00 3.20
758 1635 2.363680 CGCTCTCTCTCTCTCTCTCTCT 59.636 54.545 0.00 0.00 0.00 3.10
759 1636 2.101582 ACGCTCTCTCTCTCTCTCTCTC 59.898 54.545 0.00 0.00 0.00 3.20
760 1637 2.111384 ACGCTCTCTCTCTCTCTCTCT 58.889 52.381 0.00 0.00 0.00 3.10
761 1638 2.604046 ACGCTCTCTCTCTCTCTCTC 57.396 55.000 0.00 0.00 0.00 3.20
762 1639 3.068307 GTCTACGCTCTCTCTCTCTCTCT 59.932 52.174 0.00 0.00 0.00 3.10
763 1640 3.068307 AGTCTACGCTCTCTCTCTCTCTC 59.932 52.174 0.00 0.00 0.00 3.20
800 1677 2.323959 CATTCGGAGCTATCTCTTCGC 58.676 52.381 0.00 0.00 39.31 4.70
846 1723 1.768077 GAGCTCCAGGCCAGGGTAT 60.768 63.158 15.24 0.00 43.05 2.73
847 1724 1.590339 TAGAGCTCCAGGCCAGGGTA 61.590 60.000 15.24 0.00 43.05 3.69
848 1725 2.263099 ATAGAGCTCCAGGCCAGGGT 62.263 60.000 15.24 0.00 43.05 4.34
850 1727 1.949799 ATATAGAGCTCCAGGCCAGG 58.050 55.000 10.93 8.15 43.05 4.45
852 1729 2.834549 GCTTATATAGAGCTCCAGGCCA 59.165 50.000 10.93 0.00 43.05 5.36
854 1731 2.159170 CCGCTTATATAGAGCTCCAGGC 60.159 54.545 10.93 4.87 37.99 4.85
855 1732 3.129638 GTCCGCTTATATAGAGCTCCAGG 59.870 52.174 10.93 1.19 37.99 4.45
857 1734 2.747989 CGTCCGCTTATATAGAGCTCCA 59.252 50.000 10.93 0.00 37.99 3.86
881 1868 1.972660 GATGAACAGGTAGGGGCGCT 61.973 60.000 7.64 9.68 0.00 5.92
938 1934 6.205076 TCGATGTCTAGCTATCACCTTTCTAC 59.795 42.308 0.00 0.00 0.00 2.59
941 1937 5.216648 GTCGATGTCTAGCTATCACCTTTC 58.783 45.833 0.00 0.00 0.00 2.62
942 1938 4.038162 GGTCGATGTCTAGCTATCACCTTT 59.962 45.833 0.00 0.00 0.00 3.11
996 1992 4.222145 TCTGCGTAGTTAACCTCCATTTCT 59.778 41.667 0.88 0.00 0.00 2.52
1017 2013 3.133365 AACAACCTGGCCGGCTTCT 62.133 57.895 28.56 3.22 35.61 2.85
1269 2268 3.691342 TTGAGGTGGAGGACGCGG 61.691 66.667 12.47 0.00 0.00 6.46
1418 2450 4.768583 TGCATGCATGAACAGTACTATGA 58.231 39.130 30.64 0.00 0.00 2.15
1460 2588 3.286353 TGAAAAACACATCAGCACTCCA 58.714 40.909 0.00 0.00 0.00 3.86
1487 2629 1.174783 GTCCAACGCTCTCCTGTAGA 58.825 55.000 0.00 0.00 0.00 2.59
1488 2630 0.173708 GGTCCAACGCTCTCCTGTAG 59.826 60.000 0.00 0.00 0.00 2.74
1508 2650 4.631247 TTGACCTGCAGCAGCGCT 62.631 61.111 17.81 2.64 46.23 5.92
1715 2862 2.732658 GACCGGTGGTCGAACACT 59.267 61.111 31.10 13.66 43.14 3.55
1813 2963 4.335647 CTGCCGGGAAGTGCACCT 62.336 66.667 14.63 0.00 33.17 4.00
2115 3265 1.331138 CTGGATGTACTCCTCGTCGAC 59.669 57.143 5.18 5.18 45.21 4.20
2163 3313 4.796231 CTCCTCCCCGTTCGCGTG 62.796 72.222 5.77 0.00 39.32 5.34
2438 3592 5.747197 TCGCTTTCTTAATTACATCCTCGAC 59.253 40.000 0.00 0.00 0.00 4.20
2573 3728 6.998338 TGATGTTGAAACAAAAATCGGTTTG 58.002 32.000 0.00 0.00 43.03 2.93
2574 3729 6.816140 ACTGATGTTGAAACAAAAATCGGTTT 59.184 30.769 0.00 0.00 43.03 3.27
2575 3730 6.337356 ACTGATGTTGAAACAAAAATCGGTT 58.663 32.000 0.00 0.00 43.03 4.44
2576 3731 5.901552 ACTGATGTTGAAACAAAAATCGGT 58.098 33.333 0.00 12.79 43.03 4.69
2577 3732 6.915300 TGTACTGATGTTGAAACAAAAATCGG 59.085 34.615 0.00 0.00 43.03 4.18
2578 3733 7.855409 TCTGTACTGATGTTGAAACAAAAATCG 59.145 33.333 0.00 0.00 43.03 3.34
2579 3734 8.958043 GTCTGTACTGATGTTGAAACAAAAATC 58.042 33.333 5.69 0.00 43.03 2.17
2580 3735 8.465999 TGTCTGTACTGATGTTGAAACAAAAAT 58.534 29.630 5.69 0.00 43.03 1.82
2581 3736 7.753132 GTGTCTGTACTGATGTTGAAACAAAAA 59.247 33.333 5.69 0.00 43.03 1.94
2582 3737 7.094592 TGTGTCTGTACTGATGTTGAAACAAAA 60.095 33.333 5.69 0.00 43.03 2.44
2583 3738 6.372937 TGTGTCTGTACTGATGTTGAAACAAA 59.627 34.615 5.69 0.00 43.03 2.83
2584 3739 5.877564 TGTGTCTGTACTGATGTTGAAACAA 59.122 36.000 5.69 0.00 43.03 2.83
2585 3740 5.423886 TGTGTCTGTACTGATGTTGAAACA 58.576 37.500 5.69 0.00 44.06 2.83
2586 3741 5.984233 TGTGTCTGTACTGATGTTGAAAC 57.016 39.130 5.69 0.00 0.00 2.78
2587 3742 6.456315 CGTTTGTGTCTGTACTGATGTTGAAA 60.456 38.462 5.69 0.05 0.00 2.69
2588 3743 5.006261 CGTTTGTGTCTGTACTGATGTTGAA 59.994 40.000 5.69 0.00 0.00 2.69
2589 3744 4.506288 CGTTTGTGTCTGTACTGATGTTGA 59.494 41.667 5.69 0.00 0.00 3.18
2590 3745 4.761745 CGTTTGTGTCTGTACTGATGTTG 58.238 43.478 5.69 0.00 0.00 3.33
2591 3746 3.247648 GCGTTTGTGTCTGTACTGATGTT 59.752 43.478 5.69 0.00 0.00 2.71
2592 3747 2.800544 GCGTTTGTGTCTGTACTGATGT 59.199 45.455 5.69 0.00 0.00 3.06
2593 3748 3.059884 AGCGTTTGTGTCTGTACTGATG 58.940 45.455 5.69 0.00 0.00 3.07
2594 3749 3.386768 AGCGTTTGTGTCTGTACTGAT 57.613 42.857 5.69 0.00 0.00 2.90
2595 3750 2.882927 AGCGTTTGTGTCTGTACTGA 57.117 45.000 0.00 0.00 0.00 3.41
2596 3751 6.887376 ATATAAGCGTTTGTGTCTGTACTG 57.113 37.500 0.00 0.00 0.00 2.74
2597 3752 9.674824 GTATATATAAGCGTTTGTGTCTGTACT 57.325 33.333 0.00 0.00 0.00 2.73
2598 3753 8.624877 CGTATATATAAGCGTTTGTGTCTGTAC 58.375 37.037 0.00 0.00 0.00 2.90
2599 3754 8.344831 ACGTATATATAAGCGTTTGTGTCTGTA 58.655 33.333 5.68 0.00 33.54 2.74
2600 3755 7.166970 CACGTATATATAAGCGTTTGTGTCTGT 59.833 37.037 10.84 0.00 35.25 3.41
2601 3756 7.490868 CACGTATATATAAGCGTTTGTGTCTG 58.509 38.462 10.84 0.00 35.25 3.51
2602 3757 6.143438 GCACGTATATATAAGCGTTTGTGTCT 59.857 38.462 10.84 0.00 35.25 3.41
2603 3758 6.074729 TGCACGTATATATAAGCGTTTGTGTC 60.075 38.462 10.84 0.00 35.25 3.67
2604 3759 5.749588 TGCACGTATATATAAGCGTTTGTGT 59.250 36.000 10.84 0.00 35.25 3.72
2605 3760 6.205337 TGCACGTATATATAAGCGTTTGTG 57.795 37.500 10.84 0.00 35.25 3.33
2606 3761 7.595875 TGTATGCACGTATATATAAGCGTTTGT 59.404 33.333 10.84 0.00 35.25 2.83
2607 3762 7.891220 GTGTATGCACGTATATATAAGCGTTTG 59.109 37.037 10.84 4.69 35.75 2.93
2608 3763 7.946043 GTGTATGCACGTATATATAAGCGTTT 58.054 34.615 10.84 0.00 35.75 3.60
2609 3764 7.502177 GTGTATGCACGTATATATAAGCGTT 57.498 36.000 10.84 2.78 35.75 4.84
2624 3779 2.874701 GTCATGGGATGAGTGTATGCAC 59.125 50.000 5.71 5.71 45.57 4.57
2625 3780 2.158769 GGTCATGGGATGAGTGTATGCA 60.159 50.000 0.00 0.00 40.53 3.96
2626 3781 2.498167 GGTCATGGGATGAGTGTATGC 58.502 52.381 0.00 0.00 40.53 3.14
2627 3782 2.759191 CGGTCATGGGATGAGTGTATG 58.241 52.381 0.00 0.00 40.53 2.39
2628 3783 1.070758 GCGGTCATGGGATGAGTGTAT 59.929 52.381 0.00 0.00 40.53 2.29
2629 3784 0.464036 GCGGTCATGGGATGAGTGTA 59.536 55.000 0.00 0.00 40.53 2.90
2630 3785 1.221840 GCGGTCATGGGATGAGTGT 59.778 57.895 0.00 0.00 40.53 3.55
2631 3786 1.091771 GTGCGGTCATGGGATGAGTG 61.092 60.000 0.00 0.00 40.53 3.51
2632 3787 1.221840 GTGCGGTCATGGGATGAGT 59.778 57.895 0.00 0.00 40.53 3.41
2633 3788 1.091771 GTGTGCGGTCATGGGATGAG 61.092 60.000 0.00 0.00 40.53 2.90
2634 3789 1.078497 GTGTGCGGTCATGGGATGA 60.078 57.895 0.00 0.00 36.84 2.92
2635 3790 1.377072 TGTGTGCGGTCATGGGATG 60.377 57.895 0.00 0.00 0.00 3.51
2636 3791 1.377202 GTGTGTGCGGTCATGGGAT 60.377 57.895 0.00 0.00 0.00 3.85
2637 3792 2.031919 GTGTGTGCGGTCATGGGA 59.968 61.111 0.00 0.00 0.00 4.37
2638 3793 2.032528 AGTGTGTGCGGTCATGGG 59.967 61.111 0.00 0.00 0.00 4.00
2639 3794 1.004560 AGAGTGTGTGCGGTCATGG 60.005 57.895 0.00 0.00 0.00 3.66
2640 3795 1.016130 GGAGAGTGTGTGCGGTCATG 61.016 60.000 0.00 0.00 0.00 3.07
2641 3796 1.293498 GGAGAGTGTGTGCGGTCAT 59.707 57.895 0.00 0.00 0.00 3.06
2642 3797 2.131067 TGGAGAGTGTGTGCGGTCA 61.131 57.895 0.00 0.00 0.00 4.02
2643 3798 1.664965 GTGGAGAGTGTGTGCGGTC 60.665 63.158 0.00 0.00 0.00 4.79
2644 3799 2.421739 GTGGAGAGTGTGTGCGGT 59.578 61.111 0.00 0.00 0.00 5.68
2645 3800 1.532604 TAGGTGGAGAGTGTGTGCGG 61.533 60.000 0.00 0.00 0.00 5.69
2646 3801 0.317160 TTAGGTGGAGAGTGTGTGCG 59.683 55.000 0.00 0.00 0.00 5.34
2647 3802 1.608283 GGTTAGGTGGAGAGTGTGTGC 60.608 57.143 0.00 0.00 0.00 4.57
2648 3803 1.691976 TGGTTAGGTGGAGAGTGTGTG 59.308 52.381 0.00 0.00 0.00 3.82
2649 3804 2.097110 TGGTTAGGTGGAGAGTGTGT 57.903 50.000 0.00 0.00 0.00 3.72
2650 3805 2.093447 GGATGGTTAGGTGGAGAGTGTG 60.093 54.545 0.00 0.00 0.00 3.82
2651 3806 2.188817 GGATGGTTAGGTGGAGAGTGT 58.811 52.381 0.00 0.00 0.00 3.55
2652 3807 2.187958 TGGATGGTTAGGTGGAGAGTG 58.812 52.381 0.00 0.00 0.00 3.51
2653 3808 2.572104 GTTGGATGGTTAGGTGGAGAGT 59.428 50.000 0.00 0.00 0.00 3.24
2654 3809 2.092914 GGTTGGATGGTTAGGTGGAGAG 60.093 54.545 0.00 0.00 0.00 3.20
2655 3810 1.913419 GGTTGGATGGTTAGGTGGAGA 59.087 52.381 0.00 0.00 0.00 3.71
2656 3811 1.633432 TGGTTGGATGGTTAGGTGGAG 59.367 52.381 0.00 0.00 0.00 3.86
2657 3812 1.353022 GTGGTTGGATGGTTAGGTGGA 59.647 52.381 0.00 0.00 0.00 4.02
2658 3813 1.074727 TGTGGTTGGATGGTTAGGTGG 59.925 52.381 0.00 0.00 0.00 4.61
2659 3814 2.159382 GTGTGGTTGGATGGTTAGGTG 58.841 52.381 0.00 0.00 0.00 4.00
2660 3815 1.777878 TGTGTGGTTGGATGGTTAGGT 59.222 47.619 0.00 0.00 0.00 3.08
2661 3816 2.224769 ACTGTGTGGTTGGATGGTTAGG 60.225 50.000 0.00 0.00 0.00 2.69
2662 3817 3.140325 ACTGTGTGGTTGGATGGTTAG 57.860 47.619 0.00 0.00 0.00 2.34
2663 3818 3.586470 AACTGTGTGGTTGGATGGTTA 57.414 42.857 0.00 0.00 0.00 2.85
2664 3819 2.430332 CAAACTGTGTGGTTGGATGGTT 59.570 45.455 0.00 0.00 39.58 3.67
2665 3820 2.031120 CAAACTGTGTGGTTGGATGGT 58.969 47.619 0.00 0.00 39.58 3.55
2666 3821 2.798976 CAAACTGTGTGGTTGGATGG 57.201 50.000 0.00 0.00 39.58 3.51
2674 3829 1.639280 GTGCAAACCAAACTGTGTGG 58.361 50.000 15.56 15.56 42.28 4.17
2675 3830 1.135546 TCGTGCAAACCAAACTGTGTG 60.136 47.619 0.00 0.00 0.00 3.82
2676 3831 1.132262 CTCGTGCAAACCAAACTGTGT 59.868 47.619 0.00 0.00 0.00 3.72
2677 3832 1.132262 ACTCGTGCAAACCAAACTGTG 59.868 47.619 0.00 0.00 0.00 3.66
2678 3833 1.400494 GACTCGTGCAAACCAAACTGT 59.600 47.619 0.00 0.00 0.00 3.55
2679 3834 1.400142 TGACTCGTGCAAACCAAACTG 59.600 47.619 0.00 0.00 0.00 3.16
2680 3835 1.745232 TGACTCGTGCAAACCAAACT 58.255 45.000 0.00 0.00 0.00 2.66
2681 3836 2.553079 TTGACTCGTGCAAACCAAAC 57.447 45.000 0.00 0.00 0.00 2.93
2682 3837 3.443037 CAATTGACTCGTGCAAACCAAA 58.557 40.909 0.00 0.00 0.00 3.28
2683 3838 2.797792 GCAATTGACTCGTGCAAACCAA 60.798 45.455 10.34 0.00 38.19 3.67
2684 3839 1.268999 GCAATTGACTCGTGCAAACCA 60.269 47.619 10.34 0.00 38.19 3.67
2685 3840 1.268999 TGCAATTGACTCGTGCAAACC 60.269 47.619 10.34 0.00 44.88 3.27
2686 3841 2.118228 TGCAATTGACTCGTGCAAAC 57.882 45.000 10.34 0.00 44.88 2.93
2689 3844 1.592064 TCTTGCAATTGACTCGTGCA 58.408 45.000 10.34 0.00 46.11 4.57
2690 3845 2.686558 TTCTTGCAATTGACTCGTGC 57.313 45.000 10.34 0.00 38.78 5.34
2691 3846 3.243035 TGGTTTCTTGCAATTGACTCGTG 60.243 43.478 10.34 0.00 0.00 4.35
2692 3847 2.948979 TGGTTTCTTGCAATTGACTCGT 59.051 40.909 10.34 0.00 0.00 4.18
2798 3954 0.663153 AACGGCTGTTCAGTGCTTTC 59.337 50.000 4.68 0.00 30.83 2.62
2825 3981 4.697352 CACCTGTCGGAAAAGAGATCAAAT 59.303 41.667 0.00 0.00 0.00 2.32
2955 4123 1.000993 GAGAGAGAGGACAGGGGCA 59.999 63.158 0.00 0.00 0.00 5.36
2997 4257 4.467107 AGGAGAGGGGAGCGGGAC 62.467 72.222 0.00 0.00 0.00 4.46
2998 4258 4.144727 GAGGAGAGGGGAGCGGGA 62.145 72.222 0.00 0.00 0.00 5.14
2999 4259 4.150454 AGAGGAGAGGGGAGCGGG 62.150 72.222 0.00 0.00 0.00 6.13
3000 4260 2.520741 GAGAGGAGAGGGGAGCGG 60.521 72.222 0.00 0.00 0.00 5.52
3001 4261 1.528309 GAGAGAGGAGAGGGGAGCG 60.528 68.421 0.00 0.00 0.00 5.03
3002 4262 1.528309 CGAGAGAGGAGAGGGGAGC 60.528 68.421 0.00 0.00 0.00 4.70
3003 4263 1.528309 GCGAGAGAGGAGAGGGGAG 60.528 68.421 0.00 0.00 0.00 4.30
3004 4264 2.598467 GCGAGAGAGGAGAGGGGA 59.402 66.667 0.00 0.00 0.00 4.81
3005 4265 2.520741 GGCGAGAGAGGAGAGGGG 60.521 72.222 0.00 0.00 0.00 4.79
3006 4266 2.520741 GGGCGAGAGAGGAGAGGG 60.521 72.222 0.00 0.00 0.00 4.30
3007 4267 1.076339 AAGGGCGAGAGAGGAGAGG 60.076 63.158 0.00 0.00 0.00 3.69
3008 4268 2.015227 GCAAGGGCGAGAGAGGAGAG 62.015 65.000 0.00 0.00 0.00 3.20
3009 4269 2.055042 GCAAGGGCGAGAGAGGAGA 61.055 63.158 0.00 0.00 0.00 3.71
3010 4270 2.498726 GCAAGGGCGAGAGAGGAG 59.501 66.667 0.00 0.00 0.00 3.69
3225 4519 4.020573 TCTGAATCTTTCTTCACGGCCTTA 60.021 41.667 0.00 0.00 31.98 2.69
3238 4532 1.673767 TGGCTCCCCTCTGAATCTTT 58.326 50.000 0.00 0.00 0.00 2.52
3244 4538 0.636647 TAGTGATGGCTCCCCTCTGA 59.363 55.000 0.00 0.00 0.00 3.27
3355 4663 8.873215 ATCCTATAACACTAGAATCACAAACG 57.127 34.615 0.00 0.00 0.00 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.