Multiple sequence alignment - TraesCS4A01G002400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G002400 chr4A 100.000 6590 0 0 1 6590 2045364 2038775 0.000000e+00 12170
1 TraesCS4A01G002400 chr4A 79.515 742 85 35 5606 6313 2011730 2011022 3.600000e-127 466
2 TraesCS4A01G002400 chr4A 86.017 236 32 1 6309 6544 2007392 2007158 1.100000e-62 252
3 TraesCS4A01G002400 chr4A 88.043 92 7 4 5847 5936 715367608 715367519 9.040000e-19 106
4 TraesCS4A01G002400 chr4B 94.276 2673 101 26 3231 5872 589801890 589804541 0.000000e+00 4041
5 TraesCS4A01G002400 chr4B 95.117 1577 66 7 1587 3157 589799567 589801138 0.000000e+00 2475
6 TraesCS4A01G002400 chr4B 91.519 1132 59 11 468 1573 589798195 589799315 0.000000e+00 1524
7 TraesCS4A01G002400 chr4B 91.111 630 39 8 5966 6590 589804581 589805198 0.000000e+00 837
8 TraesCS4A01G002400 chr4B 80.346 982 117 39 5606 6550 589809238 589810180 0.000000e+00 675
9 TraesCS4A01G002400 chr4B 83.529 425 57 7 6178 6590 590051712 590052135 1.040000e-102 385
10 TraesCS4A01G002400 chr4B 97.170 106 3 0 3231 3336 589801177 589801282 5.250000e-41 180
11 TraesCS4A01G002400 chr4D 95.091 2261 90 11 3285 5540 469428419 469430663 0.000000e+00 3541
12 TraesCS4A01G002400 chr4D 95.418 1724 57 9 1586 3298 469426343 469428055 0.000000e+00 2726
13 TraesCS4A01G002400 chr4D 87.201 836 72 24 5779 6590 469431038 469431862 0.000000e+00 918
14 TraesCS4A01G002400 chr4D 80.797 979 113 40 5606 6550 469436405 469437342 0.000000e+00 697
15 TraesCS4A01G002400 chr4D 86.472 377 44 4 6178 6548 469497455 469497830 2.210000e-109 407
16 TraesCS4A01G002400 chr4D 81.387 548 51 23 1050 1575 469425708 469426226 3.700000e-107 399
17 TraesCS4A01G002400 chr4D 95.714 70 3 0 5867 5936 127149709 127149778 5.400000e-21 113
18 TraesCS4A01G002400 chr3B 79.229 934 106 32 3373 4261 778779143 778778253 2.670000e-158 569
19 TraesCS4A01G002400 chr3B 95.714 70 3 0 5867 5936 584534143 584534212 5.400000e-21 113
20 TraesCS4A01G002400 chr6D 80.628 382 41 12 4823 5192 29264003 29264363 1.410000e-66 265
21 TraesCS4A01G002400 chr6D 78.684 380 49 9 4823 5192 29359823 29360180 2.390000e-54 224
22 TraesCS4A01G002400 chr6D 97.059 68 2 0 5869 5936 291677566 291677499 1.500000e-21 115
23 TraesCS4A01G002400 chrUn 82.463 268 43 4 6221 6486 89950580 89950315 1.430000e-56 231
24 TraesCS4A01G002400 chr7D 82.463 268 43 4 6221 6486 22991224 22990959 1.430000e-56 231
25 TraesCS4A01G002400 chr6B 81.208 298 35 5 4862 5157 59103716 59103438 3.090000e-53 220
26 TraesCS4A01G002400 chr6B 86.458 192 19 1 4823 5007 58820449 58820258 3.120000e-48 204
27 TraesCS4A01G002400 chr1B 81.356 295 31 14 3968 4261 92358189 92357918 1.110000e-52 219
28 TraesCS4A01G002400 chr2A 71.795 702 169 24 99 787 498110161 498109476 8.790000e-39 172
29 TraesCS4A01G002400 chr2A 70.899 701 177 22 99 787 544283432 544284117 8.910000e-29 139
30 TraesCS4A01G002400 chr5B 95.714 70 3 0 5867 5936 558558587 558558656 5.400000e-21 113
31 TraesCS4A01G002400 chr5B 91.250 80 6 1 5858 5936 519183557 519183478 2.510000e-19 108
32 TraesCS4A01G002400 chr5A 95.714 70 3 0 5867 5936 194319147 194319216 5.400000e-21 113
33 TraesCS4A01G002400 chr5A 95.714 70 3 0 5867 5936 350570287 350570218 5.400000e-21 113
34 TraesCS4A01G002400 chr1A 95.714 70 3 0 5867 5936 154418140 154418071 5.400000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G002400 chr4A 2038775 2045364 6589 True 12170.0 12170 100.00000 1 6590 1 chr4A.!!$R1 6589
1 TraesCS4A01G002400 chr4A 2007158 2011730 4572 True 359.0 466 82.76600 5606 6544 2 chr4A.!!$R3 938
2 TraesCS4A01G002400 chr4B 589798195 589805198 7003 False 1811.4 4041 93.83860 468 6590 5 chr4B.!!$F3 6122
3 TraesCS4A01G002400 chr4B 589809238 589810180 942 False 675.0 675 80.34600 5606 6550 1 chr4B.!!$F1 944
4 TraesCS4A01G002400 chr4D 469425708 469431862 6154 False 1896.0 3541 89.77425 1050 6590 4 chr4D.!!$F4 5540
5 TraesCS4A01G002400 chr4D 469436405 469437342 937 False 697.0 697 80.79700 5606 6550 1 chr4D.!!$F2 944
6 TraesCS4A01G002400 chr3B 778778253 778779143 890 True 569.0 569 79.22900 3373 4261 1 chr3B.!!$R1 888

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.035317 CTAGGTGTTGCAGGTGCTGA 59.965 55.000 3.18 0.00 42.66 4.26 F
169 170 0.036732 TGGTAAGAGTGCAAGCCCAG 59.963 55.000 0.00 0.00 0.00 4.45 F
170 171 0.036875 GGTAAGAGTGCAAGCCCAGT 59.963 55.000 0.00 0.00 0.00 4.00 F
1530 1569 0.036765 AGTTGCCAGCAAATGCATGG 60.037 50.000 6.64 12.59 45.16 3.66 F
1872 2160 0.879090 ATTTCTTTGTCCGGGCGTTC 59.121 50.000 0.00 0.00 0.00 3.95 F
2124 2416 1.001641 CAGCTACCAGGCAGGCTTT 60.002 57.895 0.00 0.00 43.14 3.51 F
2420 2713 1.792118 CTCAGCAGCAACAGCAGCAA 61.792 55.000 7.56 0.00 42.49 3.91 F
4160 5560 2.034558 TGCTTCCAGTTTTTACTGCAGC 59.965 45.455 15.27 15.39 40.24 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1481 1520 1.032114 AAACCCAGCCTAAGCGCATC 61.032 55.000 11.47 0.0 46.67 3.91 R
1530 1569 1.034292 GGTGCCATGGGAAGAGAAGC 61.034 60.000 15.13 0.0 0.00 3.86 R
1855 2143 1.146485 TGAACGCCCGGACAAAGAA 59.854 52.632 0.73 0.0 0.00 2.52 R
3245 4220 0.033601 TGGGTTTGTCCAGCAAGTGT 60.034 50.000 0.00 0.0 38.47 3.55 R
3403 4755 5.686159 AGAAATGAGTGCTGAAGTGAAAG 57.314 39.130 0.00 0.0 0.00 2.62 R
3961 5359 5.376854 AGCTATCATGTTGAACAACCAAC 57.623 39.130 0.62 0.0 44.84 3.77 R
4230 5630 5.536161 AGAACATGTGTCAGCAATAACCTTT 59.464 36.000 0.00 0.0 0.00 3.11 R
5988 7593 0.103208 GGCTCGACTAGTGATGGTGG 59.897 60.000 0.00 0.0 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.657952 AACTATTTGGCCGCTCCC 57.342 55.556 0.00 0.00 0.00 4.30
18 19 1.688811 AACTATTTGGCCGCTCCCA 59.311 52.632 0.00 0.00 0.00 4.37
19 20 0.394352 AACTATTTGGCCGCTCCCAG 60.394 55.000 0.00 0.00 36.00 4.45
20 21 1.271840 ACTATTTGGCCGCTCCCAGA 61.272 55.000 0.00 0.00 36.00 3.86
21 22 0.533755 CTATTTGGCCGCTCCCAGAG 60.534 60.000 0.00 0.00 36.00 3.35
22 23 1.983119 TATTTGGCCGCTCCCAGAGG 61.983 60.000 0.00 0.00 38.30 3.69
26 27 3.844090 GCCGCTCCCAGAGGACTC 61.844 72.222 0.00 0.00 37.36 3.36
27 28 2.363018 CCGCTCCCAGAGGACTCA 60.363 66.667 1.75 0.00 37.36 3.41
28 29 2.422231 CCGCTCCCAGAGGACTCAG 61.422 68.421 1.75 0.00 37.36 3.35
29 30 2.899505 GCTCCCAGAGGACTCAGC 59.100 66.667 1.75 0.00 37.19 4.26
30 31 1.685421 GCTCCCAGAGGACTCAGCT 60.685 63.158 1.75 0.00 37.19 4.24
31 32 1.264045 GCTCCCAGAGGACTCAGCTT 61.264 60.000 1.75 0.00 37.19 3.74
32 33 1.274712 CTCCCAGAGGACTCAGCTTT 58.725 55.000 1.75 0.00 37.19 3.51
33 34 0.979665 TCCCAGAGGACTCAGCTTTG 59.020 55.000 1.75 0.00 37.19 2.77
34 35 0.035630 CCCAGAGGACTCAGCTTTGG 60.036 60.000 1.75 0.30 33.47 3.28
35 36 0.689623 CCAGAGGACTCAGCTTTGGT 59.310 55.000 1.75 0.00 0.00 3.67
36 37 1.610102 CCAGAGGACTCAGCTTTGGTG 60.610 57.143 1.75 0.00 0.00 4.17
37 38 0.689623 AGAGGACTCAGCTTTGGTGG 59.310 55.000 1.75 0.00 0.00 4.61
38 39 0.687354 GAGGACTCAGCTTTGGTGGA 59.313 55.000 0.00 0.00 0.00 4.02
39 40 0.398318 AGGACTCAGCTTTGGTGGAC 59.602 55.000 0.00 0.00 0.00 4.02
40 41 0.108585 GGACTCAGCTTTGGTGGACA 59.891 55.000 0.00 0.00 0.00 4.02
41 42 1.230324 GACTCAGCTTTGGTGGACAC 58.770 55.000 0.00 0.00 0.00 3.67
42 43 0.839946 ACTCAGCTTTGGTGGACACT 59.160 50.000 2.13 0.00 0.00 3.55
43 44 1.233019 CTCAGCTTTGGTGGACACTG 58.767 55.000 2.13 0.00 0.00 3.66
44 45 0.179020 TCAGCTTTGGTGGACACTGG 60.179 55.000 2.13 0.00 0.00 4.00
45 46 0.466189 CAGCTTTGGTGGACACTGGT 60.466 55.000 2.13 0.00 0.00 4.00
46 47 0.258774 AGCTTTGGTGGACACTGGTT 59.741 50.000 2.13 0.00 0.00 3.67
47 48 1.493022 AGCTTTGGTGGACACTGGTTA 59.507 47.619 2.13 0.00 0.00 2.85
48 49 1.880027 GCTTTGGTGGACACTGGTTAG 59.120 52.381 2.13 0.00 0.00 2.34
49 50 2.504367 CTTTGGTGGACACTGGTTAGG 58.496 52.381 2.13 0.00 0.00 2.69
50 51 0.768622 TTGGTGGACACTGGTTAGGG 59.231 55.000 2.13 0.00 0.00 3.53
51 52 1.002502 GGTGGACACTGGTTAGGGC 60.003 63.158 2.13 0.00 0.00 5.19
52 53 1.489560 GGTGGACACTGGTTAGGGCT 61.490 60.000 2.13 0.00 0.00 5.19
53 54 1.272807 GTGGACACTGGTTAGGGCTA 58.727 55.000 0.00 0.00 0.00 3.93
54 55 1.207329 GTGGACACTGGTTAGGGCTAG 59.793 57.143 0.00 0.00 0.00 3.42
55 56 0.831307 GGACACTGGTTAGGGCTAGG 59.169 60.000 0.00 0.00 0.00 3.02
56 57 1.569653 GACACTGGTTAGGGCTAGGT 58.430 55.000 0.00 0.00 0.00 3.08
57 58 1.207329 GACACTGGTTAGGGCTAGGTG 59.793 57.143 0.00 0.00 0.00 4.00
58 59 1.276622 CACTGGTTAGGGCTAGGTGT 58.723 55.000 0.00 0.00 0.00 4.16
59 60 1.628846 CACTGGTTAGGGCTAGGTGTT 59.371 52.381 0.00 0.00 0.00 3.32
60 61 1.628846 ACTGGTTAGGGCTAGGTGTTG 59.371 52.381 0.00 0.00 0.00 3.33
61 62 0.326927 TGGTTAGGGCTAGGTGTTGC 59.673 55.000 0.00 0.00 0.00 4.17
62 63 0.326927 GGTTAGGGCTAGGTGTTGCA 59.673 55.000 0.00 0.00 0.00 4.08
63 64 1.679032 GGTTAGGGCTAGGTGTTGCAG 60.679 57.143 0.00 0.00 0.00 4.41
64 65 0.618458 TTAGGGCTAGGTGTTGCAGG 59.382 55.000 0.00 0.00 0.00 4.85
65 66 0.546747 TAGGGCTAGGTGTTGCAGGT 60.547 55.000 0.00 0.00 0.00 4.00
66 67 1.675641 GGGCTAGGTGTTGCAGGTG 60.676 63.158 0.00 0.00 0.00 4.00
67 68 2.335712 GGCTAGGTGTTGCAGGTGC 61.336 63.158 0.00 0.00 42.50 5.01
68 69 1.302832 GCTAGGTGTTGCAGGTGCT 60.303 57.895 3.18 0.00 42.66 4.40
69 70 1.580845 GCTAGGTGTTGCAGGTGCTG 61.581 60.000 3.18 0.00 42.66 4.41
70 71 0.035317 CTAGGTGTTGCAGGTGCTGA 59.965 55.000 3.18 0.00 42.66 4.26
71 72 0.250295 TAGGTGTTGCAGGTGCTGAC 60.250 55.000 3.18 3.15 42.66 3.51
72 73 1.823470 GGTGTTGCAGGTGCTGACA 60.823 57.895 3.18 5.68 42.66 3.58
73 74 1.383456 GGTGTTGCAGGTGCTGACAA 61.383 55.000 11.55 0.00 42.66 3.18
74 75 0.455410 GTGTTGCAGGTGCTGACAAA 59.545 50.000 11.55 0.00 42.66 2.83
75 76 0.455410 TGTTGCAGGTGCTGACAAAC 59.545 50.000 3.18 0.00 42.66 2.93
76 77 0.740737 GTTGCAGGTGCTGACAAACT 59.259 50.000 3.18 0.00 42.66 2.66
77 78 0.740149 TTGCAGGTGCTGACAAACTG 59.260 50.000 3.18 0.00 42.66 3.16
78 79 1.008079 GCAGGTGCTGACAAACTGC 60.008 57.895 1.52 1.52 45.74 4.40
79 80 1.656441 CAGGTGCTGACAAACTGCC 59.344 57.895 0.00 0.00 41.66 4.85
80 81 1.529244 AGGTGCTGACAAACTGCCC 60.529 57.895 0.00 0.00 41.66 5.36
81 82 2.564721 GGTGCTGACAAACTGCCCC 61.565 63.158 0.00 0.00 41.66 5.80
82 83 2.594303 TGCTGACAAACTGCCCCG 60.594 61.111 0.00 0.00 41.66 5.73
83 84 2.281484 GCTGACAAACTGCCCCGA 60.281 61.111 0.00 0.00 37.46 5.14
84 85 1.896660 GCTGACAAACTGCCCCGAA 60.897 57.895 0.00 0.00 37.46 4.30
85 86 1.949257 CTGACAAACTGCCCCGAAC 59.051 57.895 0.00 0.00 0.00 3.95
86 87 0.817634 CTGACAAACTGCCCCGAACA 60.818 55.000 0.00 0.00 0.00 3.18
87 88 1.098712 TGACAAACTGCCCCGAACAC 61.099 55.000 0.00 0.00 0.00 3.32
88 89 2.113131 GACAAACTGCCCCGAACACG 62.113 60.000 0.00 0.00 0.00 4.49
89 90 2.184167 CAAACTGCCCCGAACACGT 61.184 57.895 0.00 0.00 0.00 4.49
90 91 1.452470 AAACTGCCCCGAACACGTT 60.452 52.632 0.00 0.00 0.00 3.99
91 92 1.441732 AAACTGCCCCGAACACGTTC 61.442 55.000 0.00 0.00 36.29 3.95
104 105 5.961395 GAACACGTTCGTGATATGGTAAT 57.039 39.130 27.77 3.34 39.25 1.89
106 107 7.453980 GAACACGTTCGTGATATGGTAATAA 57.546 36.000 27.77 0.00 39.25 1.40
107 108 8.068893 GAACACGTTCGTGATATGGTAATAAT 57.931 34.615 27.77 2.00 39.25 1.28
108 109 7.402811 ACACGTTCGTGATATGGTAATAATG 57.597 36.000 27.77 0.43 39.25 1.90
109 110 7.204604 ACACGTTCGTGATATGGTAATAATGA 58.795 34.615 27.77 0.00 39.25 2.57
110 111 7.168637 ACACGTTCGTGATATGGTAATAATGAC 59.831 37.037 27.77 0.00 39.25 3.06
111 112 6.643770 ACGTTCGTGATATGGTAATAATGACC 59.356 38.462 0.00 0.00 37.49 4.02
119 120 4.909696 TGGTAATAATGACCATTTGGCG 57.090 40.909 0.17 0.00 42.15 5.69
120 121 3.634448 TGGTAATAATGACCATTTGGCGG 59.366 43.478 0.17 0.00 42.15 6.13
121 122 3.886505 GGTAATAATGACCATTTGGCGGA 59.113 43.478 0.17 0.00 39.32 5.54
122 123 4.522789 GGTAATAATGACCATTTGGCGGAT 59.477 41.667 0.17 0.00 39.32 4.18
123 124 5.010617 GGTAATAATGACCATTTGGCGGATT 59.989 40.000 0.17 0.00 39.32 3.01
124 125 5.612725 AATAATGACCATTTGGCGGATTT 57.387 34.783 0.17 0.00 39.32 2.17
125 126 2.965572 ATGACCATTTGGCGGATTTG 57.034 45.000 0.00 0.00 39.32 2.32
126 127 0.894141 TGACCATTTGGCGGATTTGG 59.106 50.000 0.00 0.00 39.32 3.28
127 128 0.460109 GACCATTTGGCGGATTTGGC 60.460 55.000 0.00 0.00 39.32 4.52
128 129 1.190833 ACCATTTGGCGGATTTGGCA 61.191 50.000 0.00 0.00 43.36 4.92
129 130 0.460635 CCATTTGGCGGATTTGGCAG 60.461 55.000 0.00 0.00 45.81 4.85
130 131 1.085501 CATTTGGCGGATTTGGCAGC 61.086 55.000 0.00 0.00 45.81 5.25
131 132 1.543065 ATTTGGCGGATTTGGCAGCA 61.543 50.000 0.00 0.00 45.81 4.41
132 133 1.752358 TTTGGCGGATTTGGCAGCAA 61.752 50.000 0.00 0.00 45.81 3.91
133 134 1.752358 TTGGCGGATTTGGCAGCAAA 61.752 50.000 0.00 0.00 45.81 3.68
134 135 1.446618 GGCGGATTTGGCAGCAAAG 60.447 57.895 0.00 0.00 0.00 2.77
135 136 1.290009 GCGGATTTGGCAGCAAAGT 59.710 52.632 0.00 0.00 0.00 2.66
136 137 0.525761 GCGGATTTGGCAGCAAAGTA 59.474 50.000 0.00 0.00 0.00 2.24
137 138 1.067915 GCGGATTTGGCAGCAAAGTAA 60.068 47.619 0.00 0.00 0.00 2.24
138 139 2.417243 GCGGATTTGGCAGCAAAGTAAT 60.417 45.455 0.00 0.00 0.00 1.89
139 140 3.181397 CGGATTTGGCAGCAAAGTAATG 58.819 45.455 0.00 0.00 0.00 1.90
140 141 3.119531 CGGATTTGGCAGCAAAGTAATGA 60.120 43.478 0.00 0.00 0.00 2.57
141 142 4.176271 GGATTTGGCAGCAAAGTAATGAC 58.824 43.478 0.00 0.00 0.00 3.06
142 143 4.321899 GGATTTGGCAGCAAAGTAATGACA 60.322 41.667 0.00 0.00 0.00 3.58
143 144 4.870123 TTTGGCAGCAAAGTAATGACAT 57.130 36.364 0.00 0.00 30.55 3.06
144 145 4.439305 TTGGCAGCAAAGTAATGACATC 57.561 40.909 0.00 0.00 30.55 3.06
145 146 3.689347 TGGCAGCAAAGTAATGACATCT 58.311 40.909 0.00 0.00 0.00 2.90
146 147 4.081406 TGGCAGCAAAGTAATGACATCTT 58.919 39.130 0.00 0.00 0.00 2.40
147 148 4.082625 TGGCAGCAAAGTAATGACATCTTG 60.083 41.667 0.00 0.00 0.00 3.02
148 149 3.855950 GCAGCAAAGTAATGACATCTTGC 59.144 43.478 12.87 12.87 37.80 4.01
149 150 4.616604 GCAGCAAAGTAATGACATCTTGCA 60.617 41.667 18.76 0.00 38.97 4.08
150 151 5.647589 CAGCAAAGTAATGACATCTTGCAT 58.352 37.500 18.76 7.98 38.97 3.96
151 152 5.515270 CAGCAAAGTAATGACATCTTGCATG 59.485 40.000 18.76 13.05 38.97 4.06
152 153 4.802039 GCAAAGTAATGACATCTTGCATGG 59.198 41.667 14.66 0.00 37.62 3.66
153 154 5.622914 GCAAAGTAATGACATCTTGCATGGT 60.623 40.000 14.66 0.00 37.62 3.55
154 155 6.404623 GCAAAGTAATGACATCTTGCATGGTA 60.405 38.462 14.66 0.00 37.62 3.25
155 156 7.537715 CAAAGTAATGACATCTTGCATGGTAA 58.462 34.615 0.00 0.00 0.00 2.85
156 157 6.932356 AGTAATGACATCTTGCATGGTAAG 57.068 37.500 0.00 0.00 0.00 2.34
157 158 6.653020 AGTAATGACATCTTGCATGGTAAGA 58.347 36.000 0.00 0.00 38.42 2.10
158 159 6.765036 AGTAATGACATCTTGCATGGTAAGAG 59.235 38.462 0.00 0.00 37.56 2.85
159 160 4.558226 TGACATCTTGCATGGTAAGAGT 57.442 40.909 0.00 2.20 37.56 3.24
160 161 4.256110 TGACATCTTGCATGGTAAGAGTG 58.744 43.478 0.00 4.68 37.56 3.51
161 162 3.012518 ACATCTTGCATGGTAAGAGTGC 58.987 45.455 0.00 0.00 37.56 4.40
162 163 2.857186 TCTTGCATGGTAAGAGTGCA 57.143 45.000 0.00 0.00 46.15 4.57
165 166 1.167851 TGCATGGTAAGAGTGCAAGC 58.832 50.000 0.00 0.00 44.99 4.01
166 167 0.453390 GCATGGTAAGAGTGCAAGCC 59.547 55.000 0.00 0.00 38.68 4.35
167 168 1.098050 CATGGTAAGAGTGCAAGCCC 58.902 55.000 0.00 0.00 0.00 5.19
168 169 0.698238 ATGGTAAGAGTGCAAGCCCA 59.302 50.000 0.00 0.00 0.00 5.36
169 170 0.036732 TGGTAAGAGTGCAAGCCCAG 59.963 55.000 0.00 0.00 0.00 4.45
170 171 0.036875 GGTAAGAGTGCAAGCCCAGT 59.963 55.000 0.00 0.00 0.00 4.00
171 172 1.545651 GGTAAGAGTGCAAGCCCAGTT 60.546 52.381 0.00 0.00 0.00 3.16
172 173 1.537202 GTAAGAGTGCAAGCCCAGTTG 59.463 52.381 0.00 0.00 0.00 3.16
173 174 0.183492 AAGAGTGCAAGCCCAGTTGA 59.817 50.000 0.00 0.00 0.00 3.18
174 175 0.183492 AGAGTGCAAGCCCAGTTGAA 59.817 50.000 0.00 0.00 0.00 2.69
175 176 0.595095 GAGTGCAAGCCCAGTTGAAG 59.405 55.000 0.00 0.00 0.00 3.02
176 177 1.006922 GTGCAAGCCCAGTTGAAGC 60.007 57.895 0.00 0.00 0.00 3.86
177 178 1.455402 TGCAAGCCCAGTTGAAGCA 60.455 52.632 0.00 0.00 0.00 3.91
178 179 1.042003 TGCAAGCCCAGTTGAAGCAA 61.042 50.000 0.00 0.00 0.00 3.91
179 180 0.598419 GCAAGCCCAGTTGAAGCAAC 60.598 55.000 2.22 2.22 43.83 4.17
187 188 2.702847 GTTGAAGCAACGGTGGACT 58.297 52.632 0.90 0.00 34.63 3.85
188 189 1.873698 GTTGAAGCAACGGTGGACTA 58.126 50.000 0.90 0.00 34.63 2.59
189 190 1.529865 GTTGAAGCAACGGTGGACTAC 59.470 52.381 0.90 0.00 34.63 2.73
190 191 1.045407 TGAAGCAACGGTGGACTACT 58.955 50.000 0.90 0.00 0.00 2.57
191 192 1.414919 TGAAGCAACGGTGGACTACTT 59.585 47.619 0.90 0.00 0.00 2.24
192 193 1.798813 GAAGCAACGGTGGACTACTTG 59.201 52.381 0.90 0.00 0.00 3.16
193 194 1.045407 AGCAACGGTGGACTACTTGA 58.955 50.000 0.90 0.00 0.00 3.02
194 195 1.414919 AGCAACGGTGGACTACTTGAA 59.585 47.619 0.90 0.00 0.00 2.69
195 196 2.038557 AGCAACGGTGGACTACTTGAAT 59.961 45.455 0.90 0.00 0.00 2.57
196 197 3.259876 AGCAACGGTGGACTACTTGAATA 59.740 43.478 0.90 0.00 0.00 1.75
197 198 3.617263 GCAACGGTGGACTACTTGAATAG 59.383 47.826 0.90 0.00 0.00 1.73
198 199 3.521947 ACGGTGGACTACTTGAATAGC 57.478 47.619 0.00 0.00 0.00 2.97
199 200 3.097614 ACGGTGGACTACTTGAATAGCT 58.902 45.455 0.00 0.00 0.00 3.32
200 201 4.275810 ACGGTGGACTACTTGAATAGCTA 58.724 43.478 0.00 0.00 0.00 3.32
201 202 4.894114 ACGGTGGACTACTTGAATAGCTAT 59.106 41.667 0.00 0.00 0.00 2.97
202 203 5.363005 ACGGTGGACTACTTGAATAGCTATT 59.637 40.000 18.92 18.92 0.00 1.73
203 204 6.548622 ACGGTGGACTACTTGAATAGCTATTA 59.451 38.462 18.87 3.93 0.00 0.98
204 205 7.232941 ACGGTGGACTACTTGAATAGCTATTAT 59.767 37.037 18.87 7.88 0.00 1.28
205 206 8.737175 CGGTGGACTACTTGAATAGCTATTATA 58.263 37.037 18.87 8.67 0.00 0.98
239 240 4.400529 TTGCAAAGAGATATAGCGTGGA 57.599 40.909 0.00 0.00 0.00 4.02
240 241 3.982475 TGCAAAGAGATATAGCGTGGAG 58.018 45.455 0.00 0.00 0.00 3.86
241 242 3.243873 TGCAAAGAGATATAGCGTGGAGG 60.244 47.826 0.00 0.00 0.00 4.30
242 243 3.005897 GCAAAGAGATATAGCGTGGAGGA 59.994 47.826 0.00 0.00 0.00 3.71
243 244 4.501571 GCAAAGAGATATAGCGTGGAGGAA 60.502 45.833 0.00 0.00 0.00 3.36
244 245 5.601662 CAAAGAGATATAGCGTGGAGGAAA 58.398 41.667 0.00 0.00 0.00 3.13
245 246 6.226787 CAAAGAGATATAGCGTGGAGGAAAT 58.773 40.000 0.00 0.00 0.00 2.17
246 247 5.652994 AGAGATATAGCGTGGAGGAAATC 57.347 43.478 0.00 0.00 0.00 2.17
247 248 5.329399 AGAGATATAGCGTGGAGGAAATCT 58.671 41.667 0.00 0.00 0.00 2.40
248 249 5.777732 AGAGATATAGCGTGGAGGAAATCTT 59.222 40.000 0.00 0.00 0.00 2.40
249 250 5.788450 AGATATAGCGTGGAGGAAATCTTG 58.212 41.667 0.00 0.00 0.00 3.02
250 251 5.540337 AGATATAGCGTGGAGGAAATCTTGA 59.460 40.000 0.00 0.00 0.00 3.02
251 252 2.859165 AGCGTGGAGGAAATCTTGAA 57.141 45.000 0.00 0.00 0.00 2.69
252 253 3.140325 AGCGTGGAGGAAATCTTGAAA 57.860 42.857 0.00 0.00 0.00 2.69
253 254 3.077359 AGCGTGGAGGAAATCTTGAAAG 58.923 45.455 0.00 0.00 0.00 2.62
254 255 2.162408 GCGTGGAGGAAATCTTGAAAGG 59.838 50.000 0.00 0.00 0.00 3.11
255 256 3.674997 CGTGGAGGAAATCTTGAAAGGA 58.325 45.455 0.00 0.00 0.00 3.36
256 257 4.072131 CGTGGAGGAAATCTTGAAAGGAA 58.928 43.478 0.00 0.00 0.00 3.36
257 258 4.518970 CGTGGAGGAAATCTTGAAAGGAAA 59.481 41.667 0.00 0.00 0.00 3.13
258 259 5.335191 CGTGGAGGAAATCTTGAAAGGAAAG 60.335 44.000 0.00 0.00 0.00 2.62
259 260 5.770162 GTGGAGGAAATCTTGAAAGGAAAGA 59.230 40.000 0.00 0.00 38.01 2.52
260 261 6.435591 GTGGAGGAAATCTTGAAAGGAAAGAT 59.564 38.462 0.00 0.00 44.40 2.40
261 262 6.435277 TGGAGGAAATCTTGAAAGGAAAGATG 59.565 38.462 0.00 0.00 42.26 2.90
262 263 6.435591 GGAGGAAATCTTGAAAGGAAAGATGT 59.564 38.462 0.00 0.00 42.26 3.06
263 264 7.362487 GGAGGAAATCTTGAAAGGAAAGATGTC 60.362 40.741 7.52 7.52 43.41 3.06
264 265 6.150140 AGGAAATCTTGAAAGGAAAGATGTCG 59.850 38.462 9.23 0.00 44.38 4.35
265 266 5.886960 AATCTTGAAAGGAAAGATGTCGG 57.113 39.130 0.00 0.00 42.26 4.79
266 267 4.351874 TCTTGAAAGGAAAGATGTCGGT 57.648 40.909 0.00 0.00 0.00 4.69
267 268 4.714632 TCTTGAAAGGAAAGATGTCGGTT 58.285 39.130 0.00 0.00 0.00 4.44
268 269 4.515191 TCTTGAAAGGAAAGATGTCGGTTG 59.485 41.667 0.00 0.00 0.00 3.77
269 270 4.079980 TGAAAGGAAAGATGTCGGTTGA 57.920 40.909 0.00 0.00 0.00 3.18
270 271 3.813166 TGAAAGGAAAGATGTCGGTTGAC 59.187 43.478 0.00 0.00 45.71 3.18
282 283 4.795970 GTCGGTTGACATAAATAGCCAG 57.204 45.455 0.00 0.00 44.82 4.85
283 284 3.560068 GTCGGTTGACATAAATAGCCAGG 59.440 47.826 0.00 0.00 44.82 4.45
284 285 3.199071 TCGGTTGACATAAATAGCCAGGT 59.801 43.478 0.00 0.00 0.00 4.00
285 286 3.945285 CGGTTGACATAAATAGCCAGGTT 59.055 43.478 0.00 0.00 0.00 3.50
286 287 4.035208 CGGTTGACATAAATAGCCAGGTTC 59.965 45.833 0.00 0.00 0.00 3.62
287 288 5.193679 GGTTGACATAAATAGCCAGGTTCT 58.806 41.667 0.00 0.00 0.00 3.01
288 289 5.652452 GGTTGACATAAATAGCCAGGTTCTT 59.348 40.000 0.00 0.00 0.00 2.52
289 290 6.183360 GGTTGACATAAATAGCCAGGTTCTTC 60.183 42.308 0.00 0.00 0.00 2.87
290 291 5.437060 TGACATAAATAGCCAGGTTCTTCC 58.563 41.667 0.00 0.00 0.00 3.46
291 292 5.045213 TGACATAAATAGCCAGGTTCTTCCA 60.045 40.000 0.00 0.00 39.02 3.53
292 293 5.826643 ACATAAATAGCCAGGTTCTTCCAA 58.173 37.500 0.00 0.00 39.02 3.53
293 294 6.252995 ACATAAATAGCCAGGTTCTTCCAAA 58.747 36.000 0.00 0.00 39.02 3.28
294 295 6.152831 ACATAAATAGCCAGGTTCTTCCAAAC 59.847 38.462 0.00 0.00 39.02 2.93
295 296 3.806949 ATAGCCAGGTTCTTCCAAACA 57.193 42.857 0.00 0.00 39.02 2.83
296 297 2.452600 AGCCAGGTTCTTCCAAACAA 57.547 45.000 0.00 0.00 39.02 2.83
297 298 2.310538 AGCCAGGTTCTTCCAAACAAG 58.689 47.619 0.00 0.00 39.02 3.16
298 299 2.091885 AGCCAGGTTCTTCCAAACAAGA 60.092 45.455 0.00 0.00 39.02 3.02
299 300 2.893489 GCCAGGTTCTTCCAAACAAGAT 59.107 45.455 0.00 0.00 39.02 2.40
300 301 4.079253 GCCAGGTTCTTCCAAACAAGATA 58.921 43.478 0.00 0.00 39.02 1.98
301 302 4.156739 GCCAGGTTCTTCCAAACAAGATAG 59.843 45.833 0.00 0.00 39.02 2.08
302 303 5.316987 CCAGGTTCTTCCAAACAAGATAGT 58.683 41.667 0.00 0.00 39.02 2.12
303 304 5.412904 CCAGGTTCTTCCAAACAAGATAGTC 59.587 44.000 0.00 0.00 39.02 2.59
304 305 6.234177 CAGGTTCTTCCAAACAAGATAGTCT 58.766 40.000 0.00 0.00 39.02 3.24
305 306 6.148480 CAGGTTCTTCCAAACAAGATAGTCTG 59.852 42.308 0.00 0.00 39.02 3.51
306 307 6.043243 AGGTTCTTCCAAACAAGATAGTCTGA 59.957 38.462 0.00 0.00 39.02 3.27
307 308 6.710744 GGTTCTTCCAAACAAGATAGTCTGAA 59.289 38.462 0.00 0.00 32.32 3.02
308 309 7.391833 GGTTCTTCCAAACAAGATAGTCTGAAT 59.608 37.037 0.00 0.00 32.32 2.57
309 310 8.447053 GTTCTTCCAAACAAGATAGTCTGAATC 58.553 37.037 0.00 0.00 32.32 2.52
310 311 7.106239 TCTTCCAAACAAGATAGTCTGAATCC 58.894 38.462 0.00 0.00 0.00 3.01
311 312 5.745227 TCCAAACAAGATAGTCTGAATCCC 58.255 41.667 0.00 0.00 0.00 3.85
312 313 4.572389 CCAAACAAGATAGTCTGAATCCCG 59.428 45.833 0.00 0.00 0.00 5.14
313 314 5.178797 CAAACAAGATAGTCTGAATCCCGT 58.821 41.667 0.00 0.00 0.00 5.28
314 315 4.657436 ACAAGATAGTCTGAATCCCGTC 57.343 45.455 0.00 0.00 0.00 4.79
315 316 4.282496 ACAAGATAGTCTGAATCCCGTCT 58.718 43.478 0.00 0.00 0.00 4.18
316 317 5.446860 ACAAGATAGTCTGAATCCCGTCTA 58.553 41.667 0.00 0.00 0.00 2.59
317 318 5.892119 ACAAGATAGTCTGAATCCCGTCTAA 59.108 40.000 0.00 0.00 0.00 2.10
318 319 6.039941 ACAAGATAGTCTGAATCCCGTCTAAG 59.960 42.308 0.00 0.00 0.00 2.18
319 320 4.521256 AGATAGTCTGAATCCCGTCTAAGC 59.479 45.833 0.00 0.00 0.00 3.09
320 321 1.757699 AGTCTGAATCCCGTCTAAGCC 59.242 52.381 0.00 0.00 0.00 4.35
321 322 1.480954 GTCTGAATCCCGTCTAAGCCA 59.519 52.381 0.00 0.00 0.00 4.75
322 323 2.103263 GTCTGAATCCCGTCTAAGCCAT 59.897 50.000 0.00 0.00 0.00 4.40
323 324 2.103094 TCTGAATCCCGTCTAAGCCATG 59.897 50.000 0.00 0.00 0.00 3.66
324 325 1.140852 TGAATCCCGTCTAAGCCATGG 59.859 52.381 7.63 7.63 0.00 3.66
325 326 0.179018 AATCCCGTCTAAGCCATGGC 60.179 55.000 30.12 30.12 42.33 4.40
326 327 2.056906 ATCCCGTCTAAGCCATGGCC 62.057 60.000 33.14 16.26 43.17 5.36
327 328 2.588877 CCGTCTAAGCCATGGCCG 60.589 66.667 33.14 26.38 43.17 6.13
328 329 2.588877 CGTCTAAGCCATGGCCGG 60.589 66.667 33.14 21.88 43.17 6.13
337 338 4.559063 CATGGCCGGCTCCTCCAG 62.559 72.222 28.56 5.78 32.78 3.86
345 346 2.203126 GCTCCTCCAGCGGATTGG 60.203 66.667 0.00 0.00 38.76 3.16
346 347 3.036429 GCTCCTCCAGCGGATTGGT 62.036 63.158 0.00 0.00 38.76 3.67
347 348 1.604378 CTCCTCCAGCGGATTGGTT 59.396 57.895 0.00 0.00 39.35 3.67
348 349 0.745845 CTCCTCCAGCGGATTGGTTG 60.746 60.000 0.00 0.00 39.35 3.77
349 350 1.750399 CCTCCAGCGGATTGGTTGG 60.750 63.158 0.00 0.00 39.35 3.77
350 351 2.361104 TCCAGCGGATTGGTTGGC 60.361 61.111 0.00 0.00 38.10 4.52
351 352 3.814268 CCAGCGGATTGGTTGGCG 61.814 66.667 0.00 0.00 31.36 5.69
352 353 4.481112 CAGCGGATTGGTTGGCGC 62.481 66.667 0.00 0.00 0.00 6.53
353 354 4.722700 AGCGGATTGGTTGGCGCT 62.723 61.111 7.64 0.00 0.00 5.92
354 355 4.481112 GCGGATTGGTTGGCGCTG 62.481 66.667 7.64 0.00 0.00 5.18
355 356 3.055719 CGGATTGGTTGGCGCTGT 61.056 61.111 7.64 0.00 0.00 4.40
356 357 2.877691 GGATTGGTTGGCGCTGTC 59.122 61.111 7.64 0.00 0.00 3.51
357 358 1.675641 GGATTGGTTGGCGCTGTCT 60.676 57.895 7.64 0.00 0.00 3.41
358 359 0.392461 GGATTGGTTGGCGCTGTCTA 60.392 55.000 7.64 0.00 0.00 2.59
359 360 1.668419 GATTGGTTGGCGCTGTCTAT 58.332 50.000 7.64 0.00 0.00 1.98
360 361 1.599542 GATTGGTTGGCGCTGTCTATC 59.400 52.381 7.64 3.60 0.00 2.08
361 362 0.739462 TTGGTTGGCGCTGTCTATCG 60.739 55.000 7.64 0.00 0.00 2.92
362 363 1.141019 GGTTGGCGCTGTCTATCGA 59.859 57.895 7.64 0.00 0.00 3.59
363 364 0.249489 GGTTGGCGCTGTCTATCGAT 60.249 55.000 7.64 2.16 0.00 3.59
364 365 0.855349 GTTGGCGCTGTCTATCGATG 59.145 55.000 8.54 0.00 0.00 3.84
365 366 0.249447 TTGGCGCTGTCTATCGATGG 60.249 55.000 8.54 5.03 0.00 3.51
366 367 2.024319 GGCGCTGTCTATCGATGGC 61.024 63.158 8.54 2.22 0.00 4.40
367 368 1.006805 GCGCTGTCTATCGATGGCT 60.007 57.895 8.54 0.00 0.00 4.75
368 369 1.006314 GCGCTGTCTATCGATGGCTC 61.006 60.000 8.54 2.66 0.00 4.70
369 370 0.387878 CGCTGTCTATCGATGGCTCC 60.388 60.000 8.54 0.00 0.00 4.70
370 371 0.965439 GCTGTCTATCGATGGCTCCT 59.035 55.000 8.54 0.00 0.00 3.69
371 372 1.342819 GCTGTCTATCGATGGCTCCTT 59.657 52.381 8.54 0.00 0.00 3.36
372 373 2.609244 GCTGTCTATCGATGGCTCCTTC 60.609 54.545 8.54 0.00 0.00 3.46
373 374 2.890311 CTGTCTATCGATGGCTCCTTCT 59.110 50.000 8.54 0.00 0.00 2.85
374 375 3.300388 TGTCTATCGATGGCTCCTTCTT 58.700 45.455 8.54 0.00 0.00 2.52
375 376 3.068732 TGTCTATCGATGGCTCCTTCTTG 59.931 47.826 8.54 0.00 0.00 3.02
376 377 3.319405 GTCTATCGATGGCTCCTTCTTGA 59.681 47.826 8.54 0.00 0.00 3.02
377 378 2.906691 ATCGATGGCTCCTTCTTGAG 57.093 50.000 0.00 0.00 35.40 3.02
378 379 1.561643 TCGATGGCTCCTTCTTGAGT 58.438 50.000 1.17 0.00 34.74 3.41
379 380 1.478510 TCGATGGCTCCTTCTTGAGTC 59.521 52.381 1.17 0.00 37.50 3.36
382 383 2.847327 TGGCTCCTTCTTGAGTCAAG 57.153 50.000 24.37 24.37 43.61 3.02
383 384 2.329267 TGGCTCCTTCTTGAGTCAAGA 58.671 47.619 27.96 27.96 46.93 3.02
392 393 3.668447 TCTTGAGTCAAGATGGAAGTGC 58.332 45.455 27.96 0.00 44.27 4.40
393 394 3.326006 TCTTGAGTCAAGATGGAAGTGCT 59.674 43.478 27.96 0.00 44.27 4.40
394 395 3.777106 TGAGTCAAGATGGAAGTGCTT 57.223 42.857 0.00 0.00 0.00 3.91
395 396 3.668447 TGAGTCAAGATGGAAGTGCTTC 58.332 45.455 3.48 3.48 38.80 3.86
396 397 3.071457 TGAGTCAAGATGGAAGTGCTTCA 59.929 43.478 13.16 1.48 41.20 3.02
397 398 3.672808 AGTCAAGATGGAAGTGCTTCAG 58.327 45.455 13.16 0.00 41.20 3.02
398 399 2.161211 GTCAAGATGGAAGTGCTTCAGC 59.839 50.000 13.16 0.00 41.20 4.26
399 400 2.039480 TCAAGATGGAAGTGCTTCAGCT 59.961 45.455 13.16 5.59 41.20 4.24
400 401 3.261643 TCAAGATGGAAGTGCTTCAGCTA 59.738 43.478 13.16 0.00 41.20 3.32
401 402 3.540314 AGATGGAAGTGCTTCAGCTAG 57.460 47.619 13.16 0.00 41.20 3.42
402 403 2.836981 AGATGGAAGTGCTTCAGCTAGT 59.163 45.455 13.16 0.00 41.20 2.57
403 404 4.026744 AGATGGAAGTGCTTCAGCTAGTA 58.973 43.478 13.16 0.00 41.20 1.82
404 405 4.653341 AGATGGAAGTGCTTCAGCTAGTAT 59.347 41.667 13.16 0.00 41.20 2.12
405 406 4.128925 TGGAAGTGCTTCAGCTAGTATG 57.871 45.455 13.16 0.00 41.20 2.39
406 407 3.118629 TGGAAGTGCTTCAGCTAGTATGG 60.119 47.826 13.16 0.00 41.20 2.74
407 408 3.118592 GGAAGTGCTTCAGCTAGTATGGT 60.119 47.826 13.16 0.00 41.20 3.55
408 409 3.533606 AGTGCTTCAGCTAGTATGGTG 57.466 47.619 0.00 0.00 42.66 4.17
409 410 1.936547 GTGCTTCAGCTAGTATGGTGC 59.063 52.381 0.00 0.90 42.66 5.01
410 411 1.833630 TGCTTCAGCTAGTATGGTGCT 59.166 47.619 0.00 0.00 42.66 4.40
411 412 3.031013 TGCTTCAGCTAGTATGGTGCTA 58.969 45.455 0.00 0.00 42.66 3.49
412 413 3.450817 TGCTTCAGCTAGTATGGTGCTAA 59.549 43.478 0.00 0.00 42.66 3.09
413 414 4.054671 GCTTCAGCTAGTATGGTGCTAAG 58.945 47.826 0.00 0.00 38.21 2.18
414 415 4.202161 GCTTCAGCTAGTATGGTGCTAAGA 60.202 45.833 0.00 0.00 38.21 2.10
415 416 5.682471 GCTTCAGCTAGTATGGTGCTAAGAA 60.682 44.000 0.00 0.00 38.21 2.52
416 417 5.521906 TCAGCTAGTATGGTGCTAAGAAG 57.478 43.478 0.00 0.00 35.05 2.85
417 418 4.342378 TCAGCTAGTATGGTGCTAAGAAGG 59.658 45.833 0.00 0.00 35.05 3.46
418 419 3.643792 AGCTAGTATGGTGCTAAGAAGGG 59.356 47.826 0.00 0.00 35.05 3.95
419 420 3.641906 GCTAGTATGGTGCTAAGAAGGGA 59.358 47.826 0.00 0.00 0.00 4.20
420 421 4.262249 GCTAGTATGGTGCTAAGAAGGGAG 60.262 50.000 0.00 0.00 0.00 4.30
421 422 3.995636 AGTATGGTGCTAAGAAGGGAGA 58.004 45.455 0.00 0.00 0.00 3.71
422 423 4.362677 AGTATGGTGCTAAGAAGGGAGAA 58.637 43.478 0.00 0.00 0.00 2.87
423 424 4.971924 AGTATGGTGCTAAGAAGGGAGAAT 59.028 41.667 0.00 0.00 0.00 2.40
424 425 3.634397 TGGTGCTAAGAAGGGAGAATG 57.366 47.619 0.00 0.00 0.00 2.67
425 426 2.239654 TGGTGCTAAGAAGGGAGAATGG 59.760 50.000 0.00 0.00 0.00 3.16
426 427 2.505819 GGTGCTAAGAAGGGAGAATGGA 59.494 50.000 0.00 0.00 0.00 3.41
427 428 3.137360 GGTGCTAAGAAGGGAGAATGGAT 59.863 47.826 0.00 0.00 0.00 3.41
428 429 4.384940 GTGCTAAGAAGGGAGAATGGATC 58.615 47.826 0.00 0.00 0.00 3.36
429 430 4.040047 TGCTAAGAAGGGAGAATGGATCA 58.960 43.478 0.00 0.00 0.00 2.92
430 431 4.474651 TGCTAAGAAGGGAGAATGGATCAA 59.525 41.667 0.00 0.00 0.00 2.57
431 432 5.133322 TGCTAAGAAGGGAGAATGGATCAAT 59.867 40.000 0.00 0.00 0.00 2.57
432 433 5.472820 GCTAAGAAGGGAGAATGGATCAATG 59.527 44.000 0.00 0.00 0.00 2.82
433 434 5.722172 AAGAAGGGAGAATGGATCAATGA 57.278 39.130 0.00 0.00 0.00 2.57
434 435 5.926580 AGAAGGGAGAATGGATCAATGAT 57.073 39.130 0.00 0.00 0.00 2.45
435 436 7.398289 AAGAAGGGAGAATGGATCAATGATA 57.602 36.000 0.00 0.00 0.00 2.15
436 437 7.585884 AGAAGGGAGAATGGATCAATGATAT 57.414 36.000 0.00 0.00 0.00 1.63
437 438 7.997915 AGAAGGGAGAATGGATCAATGATATT 58.002 34.615 0.00 0.00 0.00 1.28
438 439 8.454494 AGAAGGGAGAATGGATCAATGATATTT 58.546 33.333 0.00 0.00 0.00 1.40
439 440 8.418597 AAGGGAGAATGGATCAATGATATTTG 57.581 34.615 0.00 0.00 0.00 2.32
440 441 6.436532 AGGGAGAATGGATCAATGATATTTGC 59.563 38.462 0.00 0.00 0.00 3.68
441 442 6.320171 GGAGAATGGATCAATGATATTTGCG 58.680 40.000 0.00 0.00 0.00 4.85
442 443 6.263516 AGAATGGATCAATGATATTTGCGG 57.736 37.500 0.00 0.00 0.00 5.69
443 444 3.921119 TGGATCAATGATATTTGCGGC 57.079 42.857 0.00 0.00 0.00 6.53
444 445 3.220940 TGGATCAATGATATTTGCGGCA 58.779 40.909 0.00 0.00 0.00 5.69
445 446 3.827876 TGGATCAATGATATTTGCGGCAT 59.172 39.130 2.28 0.00 0.00 4.40
446 447 5.008980 TGGATCAATGATATTTGCGGCATA 58.991 37.500 2.28 0.00 0.00 3.14
447 448 5.653330 TGGATCAATGATATTTGCGGCATAT 59.347 36.000 2.28 7.39 0.00 1.78
448 449 6.827762 TGGATCAATGATATTTGCGGCATATA 59.172 34.615 14.09 14.09 0.00 0.86
449 450 7.012610 TGGATCAATGATATTTGCGGCATATAG 59.987 37.037 16.27 5.23 0.00 1.31
450 451 7.227314 GGATCAATGATATTTGCGGCATATAGA 59.773 37.037 16.27 9.47 0.00 1.98
451 452 8.687292 ATCAATGATATTTGCGGCATATAGAT 57.313 30.769 16.27 10.94 0.00 1.98
452 453 9.783081 ATCAATGATATTTGCGGCATATAGATA 57.217 29.630 16.27 7.54 0.00 1.98
453 454 9.045223 TCAATGATATTTGCGGCATATAGATAC 57.955 33.333 16.27 9.55 0.00 2.24
454 455 8.829612 CAATGATATTTGCGGCATATAGATACA 58.170 33.333 16.27 13.38 0.00 2.29
455 456 9.565090 AATGATATTTGCGGCATATAGATACAT 57.435 29.630 16.27 14.55 0.00 2.29
456 457 8.593492 TGATATTTGCGGCATATAGATACATC 57.407 34.615 16.27 10.44 0.00 3.06
457 458 8.424133 TGATATTTGCGGCATATAGATACATCT 58.576 33.333 16.27 0.00 40.86 2.90
458 459 9.265901 GATATTTGCGGCATATAGATACATCTT 57.734 33.333 16.27 0.00 38.32 2.40
459 460 6.968131 TTTGCGGCATATAGATACATCTTC 57.032 37.500 2.28 0.00 38.32 2.87
460 461 5.659440 TGCGGCATATAGATACATCTTCA 57.341 39.130 0.00 0.00 38.32 3.02
461 462 6.036577 TGCGGCATATAGATACATCTTCAA 57.963 37.500 0.00 0.00 38.32 2.69
462 463 5.869344 TGCGGCATATAGATACATCTTCAAC 59.131 40.000 0.00 0.00 38.32 3.18
463 464 6.102663 GCGGCATATAGATACATCTTCAACT 58.897 40.000 0.00 0.00 38.32 3.16
464 465 6.035435 GCGGCATATAGATACATCTTCAACTG 59.965 42.308 0.00 0.00 38.32 3.16
465 466 6.035435 CGGCATATAGATACATCTTCAACTGC 59.965 42.308 0.00 1.45 38.32 4.40
466 467 6.875726 GGCATATAGATACATCTTCAACTGCA 59.124 38.462 0.00 0.00 38.32 4.41
475 476 0.594796 CTTCAACTGCAACAACGCCC 60.595 55.000 0.00 0.00 0.00 6.13
507 508 3.720949 TTTCATGCTATGATGCAAGGC 57.279 42.857 0.00 0.00 46.61 4.35
530 531 2.393768 CGCTGGCAATCGAGCACTT 61.394 57.895 3.08 0.00 34.69 3.16
547 548 8.082852 TCGAGCACTTAGATAAACCTATCATTC 58.917 37.037 0.00 0.00 37.05 2.67
558 561 9.377312 GATAAACCTATCATTCTAGGCAGATTC 57.623 37.037 0.00 0.00 41.81 2.52
565 568 7.609097 ATCATTCTAGGCAGATTCTACTTCA 57.391 36.000 0.00 0.00 0.00 3.02
568 571 2.998316 AGGCAGATTCTACTTCAGCC 57.002 50.000 2.94 2.94 43.86 4.85
577 580 1.065199 TCTACTTCAGCCTTGGCCATG 60.065 52.381 6.09 9.47 0.00 3.66
578 581 0.698238 TACTTCAGCCTTGGCCATGT 59.302 50.000 6.09 6.51 0.00 3.21
579 582 0.698238 ACTTCAGCCTTGGCCATGTA 59.302 50.000 6.09 0.00 0.00 2.29
581 584 0.698238 TTCAGCCTTGGCCATGTACT 59.302 50.000 6.09 5.89 0.00 2.73
582 585 0.698238 TCAGCCTTGGCCATGTACTT 59.302 50.000 6.09 0.00 0.00 2.24
591 594 1.134371 GGCCATGTACTTGAGGGAGAC 60.134 57.143 10.20 0.00 0.00 3.36
638 645 7.070447 TGGACATTTATCTGCTGAGATTAGAGT 59.930 37.037 0.00 0.00 39.76 3.24
640 647 8.659925 ACATTTATCTGCTGAGATTAGAGTTG 57.340 34.615 0.00 0.00 39.76 3.16
730 737 4.685924 GGCACACTATAGCCGTACTAAAA 58.314 43.478 0.00 0.00 41.70 1.52
734 741 6.460123 GCACACTATAGCCGTACTAAAACCTA 60.460 42.308 0.00 0.00 33.57 3.08
746 753 9.431887 CCGTACTAAAACCTATACTACGGTATA 57.568 37.037 0.00 0.00 40.05 1.47
758 765 7.792374 ATACTACGGTATAGTTGAACTCGAA 57.208 36.000 0.00 0.00 36.93 3.71
793 800 5.308497 TGTGAGGATTTGTTGTCTAACCCTA 59.692 40.000 0.00 0.00 35.92 3.53
814 830 8.368668 ACCCTAATCTTATGAAATCTTACCTCG 58.631 37.037 0.00 0.00 0.00 4.63
875 891 2.945984 CACACATGTGGCGTGACC 59.054 61.111 28.64 0.00 42.10 4.02
876 892 1.597854 CACACATGTGGCGTGACCT 60.598 57.895 28.64 3.06 42.10 3.85
924 951 0.544697 AGGGGTGAAGACGTGTGTTT 59.455 50.000 0.00 0.00 0.00 2.83
937 964 0.102663 TGTGTTTGTGTGCCATGCTG 59.897 50.000 0.00 0.00 0.00 4.41
1029 1056 1.012486 GGTAGACCAACCTTGCGTCG 61.012 60.000 0.00 0.00 36.53 5.12
1039 1066 1.515952 CTTGCGTCGCTCTCTCCTG 60.516 63.158 19.50 0.00 0.00 3.86
1142 1175 1.408474 CGGCGAGGTACGTAACTTGC 61.408 60.000 35.32 35.32 44.60 4.01
1178 1211 1.449070 GTTCACCCGGATCGGTTCC 60.449 63.158 0.73 0.00 46.80 3.62
1292 1327 3.252484 GAAATCGCGTCCGGTCGG 61.252 66.667 22.18 12.38 34.56 4.79
1344 1379 0.332972 AACCCTTGAGAATCCCCTGC 59.667 55.000 0.00 0.00 0.00 4.85
1370 1405 5.871524 GGAATTTTCTGCTCCAAGGATTTTC 59.128 40.000 0.00 0.00 0.00 2.29
1530 1569 0.036765 AGTTGCCAGCAAATGCATGG 60.037 50.000 6.64 12.59 45.16 3.66
1575 1755 3.076032 AGGCAGTTTGGGAATAGAAACCT 59.924 43.478 0.00 0.00 33.34 3.50
1576 1756 3.193479 GGCAGTTTGGGAATAGAAACCTG 59.807 47.826 0.00 0.00 33.34 4.00
1578 1758 5.007682 GCAGTTTGGGAATAGAAACCTGTA 58.992 41.667 0.00 0.00 33.34 2.74
1579 1759 5.652452 GCAGTTTGGGAATAGAAACCTGTAT 59.348 40.000 0.00 0.00 33.34 2.29
1580 1760 6.404734 GCAGTTTGGGAATAGAAACCTGTATG 60.405 42.308 0.00 0.00 33.34 2.39
1582 1762 7.827236 CAGTTTGGGAATAGAAACCTGTATGTA 59.173 37.037 0.00 0.00 33.34 2.29
1583 1763 8.557450 AGTTTGGGAATAGAAACCTGTATGTAT 58.443 33.333 0.00 0.00 33.34 2.29
1584 1764 9.185680 GTTTGGGAATAGAAACCTGTATGTATT 57.814 33.333 0.00 0.00 0.00 1.89
1627 1913 5.809001 TCAGAAAATGTTAGCATCCTGTCT 58.191 37.500 12.65 0.00 33.50 3.41
1648 1934 6.211785 TGTCTTGTCACCAGTATGTATTACCA 59.788 38.462 0.00 0.00 0.00 3.25
1809 2097 4.080751 TCCTCTTTTCGGGTAGGTTAATGG 60.081 45.833 0.00 0.00 0.00 3.16
1812 2100 2.702592 TTCGGGTAGGTTAATGGCAG 57.297 50.000 0.00 0.00 0.00 4.85
1847 2135 2.930826 AATCTAGGTGGTATTGCCCG 57.069 50.000 0.00 0.00 36.04 6.13
1855 2143 3.053917 AGGTGGTATTGCCCGTTCTTATT 60.054 43.478 0.00 0.00 36.04 1.40
1865 2153 3.425758 GCCCGTTCTTATTTCTTTGTCCG 60.426 47.826 0.00 0.00 0.00 4.79
1867 2155 3.126343 CCGTTCTTATTTCTTTGTCCGGG 59.874 47.826 0.00 0.00 0.00 5.73
1872 2160 0.879090 ATTTCTTTGTCCGGGCGTTC 59.121 50.000 0.00 0.00 0.00 3.95
1888 2176 3.004315 GGCGTTCACTTTTCAATCTTCCA 59.996 43.478 0.00 0.00 0.00 3.53
1894 2182 6.409524 TCACTTTTCAATCTTCCAAAGCAT 57.590 33.333 0.00 0.00 30.63 3.79
1895 2183 6.819284 TCACTTTTCAATCTTCCAAAGCATT 58.181 32.000 0.00 0.00 30.63 3.56
1962 2250 6.275461 ACCAGATATATTGGGGAATAGAGCT 58.725 40.000 14.55 0.00 40.11 4.09
2124 2416 1.001641 CAGCTACCAGGCAGGCTTT 60.002 57.895 0.00 0.00 43.14 3.51
2217 2509 4.451774 TGCTCCAAAACATTATTTTGCTGC 59.548 37.500 14.74 14.74 37.89 5.25
2420 2713 1.792118 CTCAGCAGCAACAGCAGCAA 61.792 55.000 7.56 0.00 42.49 3.91
2477 2773 2.196595 CAATCTTGGTACCCTCCCTCA 58.803 52.381 10.07 0.00 0.00 3.86
2735 3031 7.669722 ACCAACATCTTAGTTTTACCATGATGT 59.330 33.333 0.00 0.00 42.93 3.06
2739 3035 7.882791 ACATCTTAGTTTTACCATGATGTGACA 59.117 33.333 0.00 0.00 40.64 3.58
2755 3051 7.617557 TGATGTGACATATATTTGAACGTTCG 58.382 34.615 22.48 8.68 0.00 3.95
2785 3081 5.216614 ACTGAGAGTTTCTAAACCTGGTC 57.783 43.478 0.00 0.00 39.71 4.02
2793 3089 5.940470 AGTTTCTAAACCTGGTCAGCTTATG 59.060 40.000 0.00 0.00 39.71 1.90
2943 3239 5.412617 TGATCTTACTATGGGTAGTGGGA 57.587 43.478 0.00 0.00 41.22 4.37
2944 3240 5.977533 TGATCTTACTATGGGTAGTGGGAT 58.022 41.667 0.00 2.76 41.22 3.85
2945 3241 7.111136 TGATCTTACTATGGGTAGTGGGATA 57.889 40.000 0.00 0.00 41.22 2.59
2946 3242 6.952358 TGATCTTACTATGGGTAGTGGGATAC 59.048 42.308 0.00 0.00 41.22 2.24
2948 3244 6.312529 TCTTACTATGGGTAGTGGGATACAG 58.687 44.000 0.00 0.00 41.22 2.74
3012 3309 2.227388 AGCTTTTGTCAGAAGATTGCCG 59.773 45.455 7.29 0.00 0.00 5.69
3161 4089 5.045872 GCTTAGACCATCAAATTTGCATCC 58.954 41.667 13.54 1.96 0.00 3.51
3278 4253 6.660949 TGGACAAACCCAAATTTGATTTGTTT 59.339 30.769 31.96 24.35 46.22 2.83
3366 4718 8.253113 GGAAATGTGGAAAATTATCACTCATGT 58.747 33.333 0.00 0.00 33.04 3.21
3403 4755 9.102757 TGAATATTTTAGTTGAGCATGACTCTC 57.897 33.333 15.20 5.54 46.41 3.20
3420 4772 3.386078 ACTCTCTTTCACTTCAGCACTCA 59.614 43.478 0.00 0.00 0.00 3.41
3557 4909 7.176865 CGATTATGTAGGTTGATTCTAGAGGGA 59.823 40.741 0.00 0.00 0.00 4.20
3839 5236 2.485814 GCAGAGGCTGTTAAAGGACAAG 59.514 50.000 0.00 0.00 36.96 3.16
3961 5359 3.009723 ACTTCATTGCGGTATGGTTGAG 58.990 45.455 0.00 0.00 0.00 3.02
4160 5560 2.034558 TGCTTCCAGTTTTTACTGCAGC 59.965 45.455 15.27 15.39 40.24 5.25
4225 5625 4.524802 TGGGATGAGCCTTATCAAATGT 57.475 40.909 0.00 0.00 36.66 2.71
4230 5630 6.321181 GGGATGAGCCTTATCAAATGTAACAA 59.679 38.462 0.00 0.00 36.66 2.83
4283 5683 4.159135 AGTTCAGATGCCATTTTGGTGATC 59.841 41.667 0.00 0.00 40.46 2.92
4543 5949 6.808704 GCTTTTGATTGTCTCTAAATGGGAAC 59.191 38.462 0.00 0.00 30.05 3.62
4634 6040 6.990939 GGAATCAGGTTCAGTACTATTTACCC 59.009 42.308 0.00 0.00 38.64 3.69
4666 6072 6.592798 TGTAACCAGTAGTCTTGTTTTTCG 57.407 37.500 0.00 0.00 32.86 3.46
4683 6089 6.817641 TGTTTTTCGTTACTTAGTCCACTCAA 59.182 34.615 0.00 0.00 0.00 3.02
4684 6090 7.496591 TGTTTTTCGTTACTTAGTCCACTCAAT 59.503 33.333 0.00 0.00 0.00 2.57
4880 6286 4.623932 AATCAGAACCACAGAACTAGCA 57.376 40.909 0.00 0.00 0.00 3.49
4952 6358 2.173126 AGTCCTATTCTCCTGCTGCT 57.827 50.000 0.00 0.00 0.00 4.24
5007 6413 1.580845 GCTGCAGCTCCAATTCGTGT 61.581 55.000 31.33 0.00 38.21 4.49
5013 6419 2.485426 CAGCTCCAATTCGTGTGATGTT 59.515 45.455 0.00 0.00 0.00 2.71
5077 6483 5.689383 AGCAATGTAAAACTGTTCGTCAT 57.311 34.783 0.00 0.00 0.00 3.06
5088 6494 1.599518 TTCGTCATGCAAGCCCGTT 60.600 52.632 0.00 0.00 0.00 4.44
5113 6519 0.659427 CATGCCTGCACACCTTATCG 59.341 55.000 0.00 0.00 0.00 2.92
5118 6524 1.935873 CCTGCACACCTTATCGTCATG 59.064 52.381 0.00 0.00 0.00 3.07
5126 6532 2.101582 ACCTTATCGTCATGTCTCTGCC 59.898 50.000 0.00 0.00 0.00 4.85
5209 6615 0.110486 ACATTGACCTGCCGACCTTT 59.890 50.000 0.00 0.00 0.00 3.11
5257 6663 3.110139 CACCACAAGTGTGCGCTT 58.890 55.556 9.73 0.00 44.34 4.68
5345 6751 1.186200 TCGCTGCTCTGTTGTATCCT 58.814 50.000 0.00 0.00 0.00 3.24
5400 6806 2.623889 ACTGAGGTCGCATGTATAGTCC 59.376 50.000 0.00 0.00 0.00 3.85
5410 6816 4.142071 CGCATGTATAGTCCTATGGCTGAT 60.142 45.833 0.00 0.00 0.00 2.90
5425 6831 2.030805 GGCTGATTTCACGGGCATAATC 60.031 50.000 0.00 0.00 40.66 1.75
5476 6882 1.895131 GAATGCCATGGTTGTGGAGTT 59.105 47.619 14.67 0.00 42.02 3.01
5478 6884 1.904287 TGCCATGGTTGTGGAGTTAC 58.096 50.000 14.67 0.00 42.02 2.50
5506 6913 6.976636 ACAAGCTGAGCTCTTCTTTTATAC 57.023 37.500 16.19 0.00 38.25 1.47
5507 6914 6.706295 ACAAGCTGAGCTCTTCTTTTATACT 58.294 36.000 16.19 0.00 38.25 2.12
5508 6915 7.164803 ACAAGCTGAGCTCTTCTTTTATACTT 58.835 34.615 16.19 1.16 38.25 2.24
5509 6916 8.314751 ACAAGCTGAGCTCTTCTTTTATACTTA 58.685 33.333 16.19 0.00 38.25 2.24
5510 6917 8.599774 CAAGCTGAGCTCTTCTTTTATACTTAC 58.400 37.037 16.19 0.00 38.25 2.34
5511 6918 6.975772 AGCTGAGCTCTTCTTTTATACTTACG 59.024 38.462 16.19 0.00 30.62 3.18
5616 7023 6.427547 ACCAAATTGAATTGCACTGTTTATGG 59.572 34.615 0.00 0.00 0.00 2.74
5617 7024 6.128227 CCAAATTGAATTGCACTGTTTATGGG 60.128 38.462 0.00 0.00 0.00 4.00
5618 7025 3.591196 TGAATTGCACTGTTTATGGGC 57.409 42.857 0.00 0.00 0.00 5.36
5721 7141 2.227388 GGAACATGACCTCAAGCAACTG 59.773 50.000 0.00 0.00 0.00 3.16
5726 7155 3.011566 TGACCTCAAGCAACTGGAAAA 57.988 42.857 0.00 0.00 0.00 2.29
5761 7198 1.269831 CCTGTCCGCCTATGTAAGCTC 60.270 57.143 0.00 0.00 0.00 4.09
5765 7202 2.047061 TCCGCCTATGTAAGCTCCATT 58.953 47.619 4.36 0.00 0.00 3.16
5766 7203 2.146342 CCGCCTATGTAAGCTCCATTG 58.854 52.381 4.36 3.20 0.00 2.82
5767 7204 2.485479 CCGCCTATGTAAGCTCCATTGT 60.485 50.000 4.36 0.00 0.00 2.71
5768 7205 3.244078 CCGCCTATGTAAGCTCCATTGTA 60.244 47.826 4.36 0.00 0.00 2.41
5799 7379 9.528018 GTTCACTTCATTTCAAATTTACTCCAA 57.472 29.630 0.00 0.00 0.00 3.53
5854 7434 3.312421 TGAAAGTCTGAAAACTTGCCTCG 59.688 43.478 0.00 0.00 39.40 4.63
5872 7453 3.181471 CCTCGTGAGCCATTGAATCTACT 60.181 47.826 0.00 0.00 0.00 2.57
5873 7454 4.046938 TCGTGAGCCATTGAATCTACTC 57.953 45.455 0.00 0.00 0.00 2.59
5875 7456 3.471680 GTGAGCCATTGAATCTACTCCC 58.528 50.000 0.00 0.00 0.00 4.30
5876 7457 3.135530 GTGAGCCATTGAATCTACTCCCT 59.864 47.826 0.00 0.00 0.00 4.20
5877 7458 3.389329 TGAGCCATTGAATCTACTCCCTC 59.611 47.826 0.00 0.00 0.00 4.30
5880 7461 3.073650 GCCATTGAATCTACTCCCTCCAT 59.926 47.826 0.00 0.00 0.00 3.41
5881 7462 4.446889 GCCATTGAATCTACTCCCTCCATT 60.447 45.833 0.00 0.00 0.00 3.16
5882 7463 5.312079 CCATTGAATCTACTCCCTCCATTC 58.688 45.833 0.00 0.00 0.00 2.67
5883 7464 4.672587 TTGAATCTACTCCCTCCATTCG 57.327 45.455 0.00 0.00 0.00 3.34
5884 7465 2.965831 TGAATCTACTCCCTCCATTCGG 59.034 50.000 0.00 0.00 0.00 4.30
5885 7466 3.231818 GAATCTACTCCCTCCATTCGGA 58.768 50.000 0.00 0.00 39.79 4.55
5886 7467 2.840640 TCTACTCCCTCCATTCGGAA 57.159 50.000 0.00 0.00 42.21 4.30
5887 7468 3.330126 TCTACTCCCTCCATTCGGAAT 57.670 47.619 0.00 0.00 42.21 3.01
5888 7469 3.654273 TCTACTCCCTCCATTCGGAATT 58.346 45.455 0.00 0.00 42.21 2.17
5889 7470 4.811498 TCTACTCCCTCCATTCGGAATTA 58.189 43.478 0.00 0.00 42.21 1.40
5892 7473 3.780850 ACTCCCTCCATTCGGAATTACTT 59.219 43.478 0.00 0.00 42.21 2.24
5896 7494 4.384208 CCCTCCATTCGGAATTACTTGTCT 60.384 45.833 0.00 0.00 42.21 3.41
5898 7496 4.430007 TCCATTCGGAATTACTTGTCTCG 58.570 43.478 0.00 0.00 38.83 4.04
5906 7504 5.350365 CGGAATTACTTGTCTCGAAAATGGA 59.650 40.000 0.00 0.00 0.00 3.41
5907 7505 6.037172 CGGAATTACTTGTCTCGAAAATGGAT 59.963 38.462 0.00 0.00 0.00 3.41
5908 7506 7.189512 GGAATTACTTGTCTCGAAAATGGATG 58.810 38.462 0.00 0.00 0.00 3.51
5909 7507 7.148239 GGAATTACTTGTCTCGAAAATGGATGT 60.148 37.037 0.00 0.00 0.00 3.06
5911 7509 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
5912 7510 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
5913 7511 6.644347 ACTTGTCTCGAAAATGGATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
5914 7512 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
5915 7513 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
5916 7514 7.348080 TGTCTCGAAAATGGATGTATCTAGT 57.652 36.000 0.00 0.00 0.00 2.57
5917 7515 8.459911 TGTCTCGAAAATGGATGTATCTAGTA 57.540 34.615 0.00 0.00 0.00 1.82
5918 7516 8.350722 TGTCTCGAAAATGGATGTATCTAGTAC 58.649 37.037 0.00 0.00 0.00 2.73
5920 7518 9.788889 TCTCGAAAATGGATGTATCTAGTACTA 57.211 33.333 1.89 1.89 34.27 1.82
5957 7557 5.126396 AGAGGTAAGCAATGTTCAAAAGC 57.874 39.130 0.00 0.00 0.00 3.51
5972 7572 4.125703 TCAAAAGCGTTAAACGGGTTCTA 58.874 39.130 0.00 0.00 42.82 2.10
5988 7593 4.313282 GGTTCTAGTCTGTTGTTACCCAC 58.687 47.826 0.00 0.00 0.00 4.61
6001 7606 2.570302 GTTACCCACCACCATCACTAGT 59.430 50.000 0.00 0.00 0.00 2.57
6002 7607 1.276622 ACCCACCACCATCACTAGTC 58.723 55.000 0.00 0.00 0.00 2.59
6053 7666 5.069781 CCCAGGTAGAAGAAGGATAACAGAG 59.930 48.000 0.00 0.00 0.00 3.35
6147 7760 2.014857 CCCTAGTTGATCGAGTCGTCA 58.985 52.381 13.12 12.43 0.00 4.35
6210 7826 0.815734 CAGCCTTCTCCTTGCATTGG 59.184 55.000 0.00 0.00 0.00 3.16
6369 11619 0.536687 ACCACTCGTCGTCTTCCTCA 60.537 55.000 0.00 0.00 0.00 3.86
6381 11631 4.157105 TCGTCTTCCTCAATGTTATCGACA 59.843 41.667 0.00 0.00 43.71 4.35
6490 11740 1.281899 CTTCAGCTTGTACCTAGCGC 58.718 55.000 0.00 0.00 43.37 5.92
6500 11750 3.838271 CCTAGCGCGCCCAGAAGA 61.838 66.667 30.33 3.35 0.00 2.87
6518 11769 0.531974 GAGCCAGAACAACGGTGTGA 60.532 55.000 6.99 0.00 38.27 3.58
6526 11777 3.684788 AGAACAACGGTGTGATAATCAGC 59.315 43.478 6.99 0.00 38.27 4.26
6546 11797 4.002982 AGCGACTTATGAATGAGCAACAA 58.997 39.130 0.00 0.00 0.00 2.83
6547 11798 4.093998 AGCGACTTATGAATGAGCAACAAG 59.906 41.667 0.00 0.00 0.00 3.16
6548 11799 4.142816 GCGACTTATGAATGAGCAACAAGT 60.143 41.667 0.00 0.00 0.00 3.16
6560 11811 9.722056 GAATGAGCAACAAGTAGTATAAATTGG 57.278 33.333 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.394352 CTGGGAGCGGCCAAATAGTT 60.394 55.000 2.24 0.00 38.95 2.24
1 2 1.224592 CTGGGAGCGGCCAAATAGT 59.775 57.895 2.24 0.00 38.95 2.12
3 4 1.526887 CTCTGGGAGCGGCCAAATA 59.473 57.895 2.24 0.00 38.95 1.40
4 5 2.273449 CTCTGGGAGCGGCCAAAT 59.727 61.111 2.24 0.00 38.95 2.32
5 6 4.033776 CCTCTGGGAGCGGCCAAA 62.034 66.667 2.24 0.00 38.95 3.28
9 10 3.844090 GAGTCCTCTGGGAGCGGC 61.844 72.222 0.00 0.00 43.12 6.53
10 11 2.363018 TGAGTCCTCTGGGAGCGG 60.363 66.667 0.00 0.00 43.12 5.52
11 12 3.074999 GCTGAGTCCTCTGGGAGCG 62.075 68.421 3.77 0.00 43.12 5.03
12 13 1.264045 AAGCTGAGTCCTCTGGGAGC 61.264 60.000 0.00 0.00 43.12 4.70
14 15 0.979665 CAAAGCTGAGTCCTCTGGGA 59.020 55.000 0.00 0.00 39.70 4.37
15 16 0.035630 CCAAAGCTGAGTCCTCTGGG 60.036 60.000 0.00 0.00 0.00 4.45
16 17 0.689623 ACCAAAGCTGAGTCCTCTGG 59.310 55.000 0.00 1.62 0.00 3.86
17 18 1.610102 CCACCAAAGCTGAGTCCTCTG 60.610 57.143 0.00 0.00 0.00 3.35
18 19 0.689623 CCACCAAAGCTGAGTCCTCT 59.310 55.000 0.00 0.00 0.00 3.69
19 20 0.687354 TCCACCAAAGCTGAGTCCTC 59.313 55.000 0.00 0.00 0.00 3.71
20 21 0.398318 GTCCACCAAAGCTGAGTCCT 59.602 55.000 0.00 0.00 0.00 3.85
21 22 0.108585 TGTCCACCAAAGCTGAGTCC 59.891 55.000 0.00 0.00 0.00 3.85
22 23 1.202698 AGTGTCCACCAAAGCTGAGTC 60.203 52.381 0.00 0.00 0.00 3.36
23 24 0.839946 AGTGTCCACCAAAGCTGAGT 59.160 50.000 0.00 0.00 0.00 3.41
24 25 1.233019 CAGTGTCCACCAAAGCTGAG 58.767 55.000 0.00 0.00 0.00 3.35
25 26 0.179020 CCAGTGTCCACCAAAGCTGA 60.179 55.000 0.00 0.00 0.00 4.26
26 27 0.466189 ACCAGTGTCCACCAAAGCTG 60.466 55.000 0.00 0.00 0.00 4.24
27 28 0.258774 AACCAGTGTCCACCAAAGCT 59.741 50.000 0.00 0.00 0.00 3.74
28 29 1.880027 CTAACCAGTGTCCACCAAAGC 59.120 52.381 0.00 0.00 0.00 3.51
29 30 2.504367 CCTAACCAGTGTCCACCAAAG 58.496 52.381 0.00 0.00 0.00 2.77
30 31 1.144093 CCCTAACCAGTGTCCACCAAA 59.856 52.381 0.00 0.00 0.00 3.28
31 32 0.768622 CCCTAACCAGTGTCCACCAA 59.231 55.000 0.00 0.00 0.00 3.67
32 33 1.774894 GCCCTAACCAGTGTCCACCA 61.775 60.000 0.00 0.00 0.00 4.17
33 34 1.002502 GCCCTAACCAGTGTCCACC 60.003 63.158 0.00 0.00 0.00 4.61
34 35 1.207329 CTAGCCCTAACCAGTGTCCAC 59.793 57.143 0.00 0.00 0.00 4.02
35 36 1.568504 CTAGCCCTAACCAGTGTCCA 58.431 55.000 0.00 0.00 0.00 4.02
36 37 0.831307 CCTAGCCCTAACCAGTGTCC 59.169 60.000 0.00 0.00 0.00 4.02
37 38 1.207329 CACCTAGCCCTAACCAGTGTC 59.793 57.143 0.00 0.00 0.00 3.67
38 39 1.276622 CACCTAGCCCTAACCAGTGT 58.723 55.000 0.00 0.00 0.00 3.55
39 40 1.276622 ACACCTAGCCCTAACCAGTG 58.723 55.000 0.00 0.00 0.00 3.66
40 41 1.628846 CAACACCTAGCCCTAACCAGT 59.371 52.381 0.00 0.00 0.00 4.00
41 42 1.679032 GCAACACCTAGCCCTAACCAG 60.679 57.143 0.00 0.00 0.00 4.00
42 43 0.326927 GCAACACCTAGCCCTAACCA 59.673 55.000 0.00 0.00 0.00 3.67
43 44 0.326927 TGCAACACCTAGCCCTAACC 59.673 55.000 0.00 0.00 0.00 2.85
44 45 1.679032 CCTGCAACACCTAGCCCTAAC 60.679 57.143 0.00 0.00 0.00 2.34
45 46 0.618458 CCTGCAACACCTAGCCCTAA 59.382 55.000 0.00 0.00 0.00 2.69
46 47 0.546747 ACCTGCAACACCTAGCCCTA 60.547 55.000 0.00 0.00 0.00 3.53
47 48 1.847968 ACCTGCAACACCTAGCCCT 60.848 57.895 0.00 0.00 0.00 5.19
48 49 1.675641 CACCTGCAACACCTAGCCC 60.676 63.158 0.00 0.00 0.00 5.19
49 50 2.335712 GCACCTGCAACACCTAGCC 61.336 63.158 0.00 0.00 41.59 3.93
50 51 1.302832 AGCACCTGCAACACCTAGC 60.303 57.895 0.00 0.00 45.16 3.42
51 52 0.035317 TCAGCACCTGCAACACCTAG 59.965 55.000 0.00 0.00 45.16 3.02
52 53 0.250295 GTCAGCACCTGCAACACCTA 60.250 55.000 0.00 0.00 45.16 3.08
53 54 1.526917 GTCAGCACCTGCAACACCT 60.527 57.895 0.00 0.00 45.16 4.00
54 55 1.383456 TTGTCAGCACCTGCAACACC 61.383 55.000 0.00 0.00 45.16 4.16
55 56 0.455410 TTTGTCAGCACCTGCAACAC 59.545 50.000 0.00 0.00 45.16 3.32
56 57 0.455410 GTTTGTCAGCACCTGCAACA 59.545 50.000 0.00 1.01 45.16 3.33
57 58 0.740737 AGTTTGTCAGCACCTGCAAC 59.259 50.000 0.00 0.00 45.16 4.17
58 59 0.740149 CAGTTTGTCAGCACCTGCAA 59.260 50.000 0.00 0.00 45.16 4.08
59 60 1.727511 GCAGTTTGTCAGCACCTGCA 61.728 55.000 5.16 0.00 43.63 4.41
60 61 1.008079 GCAGTTTGTCAGCACCTGC 60.008 57.895 0.00 0.00 40.37 4.85
61 62 1.656441 GGCAGTTTGTCAGCACCTG 59.344 57.895 0.00 0.00 0.00 4.00
62 63 1.529244 GGGCAGTTTGTCAGCACCT 60.529 57.895 0.00 0.00 0.00 4.00
63 64 2.564721 GGGGCAGTTTGTCAGCACC 61.565 63.158 0.00 0.00 44.47 5.01
64 65 2.908073 CGGGGCAGTTTGTCAGCAC 61.908 63.158 0.00 0.00 0.00 4.40
65 66 2.594303 CGGGGCAGTTTGTCAGCA 60.594 61.111 0.00 0.00 0.00 4.41
66 67 1.896660 TTCGGGGCAGTTTGTCAGC 60.897 57.895 0.00 0.00 0.00 4.26
67 68 0.817634 TGTTCGGGGCAGTTTGTCAG 60.818 55.000 0.00 0.00 0.00 3.51
68 69 1.098712 GTGTTCGGGGCAGTTTGTCA 61.099 55.000 0.00 0.00 0.00 3.58
69 70 1.652563 GTGTTCGGGGCAGTTTGTC 59.347 57.895 0.00 0.00 0.00 3.18
70 71 2.184167 CGTGTTCGGGGCAGTTTGT 61.184 57.895 0.00 0.00 0.00 2.83
71 72 1.720694 AACGTGTTCGGGGCAGTTTG 61.721 55.000 0.00 0.00 41.85 2.93
72 73 1.441732 GAACGTGTTCGGGGCAGTTT 61.442 55.000 0.00 0.00 41.85 2.66
73 74 1.890510 GAACGTGTTCGGGGCAGTT 60.891 57.895 0.00 0.00 41.85 3.16
74 75 2.280592 GAACGTGTTCGGGGCAGT 60.281 61.111 0.00 0.00 41.85 4.40
82 83 5.961395 ATTACCATATCACGAACGTGTTC 57.039 39.130 23.07 2.63 45.55 3.18
83 84 7.707464 TCATTATTACCATATCACGAACGTGTT 59.293 33.333 23.07 18.30 45.55 3.32
84 85 7.168637 GTCATTATTACCATATCACGAACGTGT 59.831 37.037 23.07 14.59 45.55 4.49
85 86 7.358931 GGTCATTATTACCATATCACGAACGTG 60.359 40.741 19.22 19.22 40.76 4.49
86 87 6.643770 GGTCATTATTACCATATCACGAACGT 59.356 38.462 0.00 0.00 36.96 3.99
87 88 6.643360 TGGTCATTATTACCATATCACGAACG 59.357 38.462 0.00 0.00 42.10 3.95
88 89 7.956420 TGGTCATTATTACCATATCACGAAC 57.044 36.000 0.00 0.00 42.10 3.95
99 100 3.886505 TCCGCCAAATGGTCATTATTACC 59.113 43.478 0.71 0.00 37.57 2.85
100 101 5.705609 ATCCGCCAAATGGTCATTATTAC 57.294 39.130 0.71 0.00 37.57 1.89
101 102 6.462207 CCAAATCCGCCAAATGGTCATTATTA 60.462 38.462 0.71 0.00 37.57 0.98
102 103 5.358922 CAAATCCGCCAAATGGTCATTATT 58.641 37.500 0.71 0.00 37.57 1.40
103 104 4.202243 CCAAATCCGCCAAATGGTCATTAT 60.202 41.667 0.71 0.00 37.57 1.28
104 105 3.131933 CCAAATCCGCCAAATGGTCATTA 59.868 43.478 0.71 0.00 37.57 1.90
105 106 2.093553 CCAAATCCGCCAAATGGTCATT 60.094 45.455 0.71 0.00 37.57 2.57
106 107 1.481772 CCAAATCCGCCAAATGGTCAT 59.518 47.619 0.71 0.00 37.57 3.06
107 108 0.894141 CCAAATCCGCCAAATGGTCA 59.106 50.000 0.71 0.00 37.57 4.02
108 109 0.460109 GCCAAATCCGCCAAATGGTC 60.460 55.000 0.71 0.00 37.57 4.02
109 110 1.190833 TGCCAAATCCGCCAAATGGT 61.191 50.000 0.71 0.00 37.57 3.55
110 111 0.460635 CTGCCAAATCCGCCAAATGG 60.461 55.000 0.00 0.00 38.53 3.16
111 112 1.085501 GCTGCCAAATCCGCCAAATG 61.086 55.000 0.00 0.00 0.00 2.32
112 113 1.218854 GCTGCCAAATCCGCCAAAT 59.781 52.632 0.00 0.00 0.00 2.32
113 114 1.752358 TTGCTGCCAAATCCGCCAAA 61.752 50.000 0.00 0.00 0.00 3.28
114 115 1.752358 TTTGCTGCCAAATCCGCCAA 61.752 50.000 0.00 0.00 36.09 4.52
115 116 2.157305 CTTTGCTGCCAAATCCGCCA 62.157 55.000 0.00 0.00 39.98 5.69
116 117 1.446618 CTTTGCTGCCAAATCCGCC 60.447 57.895 0.00 0.00 39.98 6.13
117 118 0.525761 TACTTTGCTGCCAAATCCGC 59.474 50.000 0.00 0.00 39.98 5.54
118 119 3.119531 TCATTACTTTGCTGCCAAATCCG 60.120 43.478 0.00 0.00 39.98 4.18
119 120 4.176271 GTCATTACTTTGCTGCCAAATCC 58.824 43.478 0.00 0.00 39.98 3.01
120 121 4.808558 TGTCATTACTTTGCTGCCAAATC 58.191 39.130 0.00 0.00 39.98 2.17
121 122 4.870123 TGTCATTACTTTGCTGCCAAAT 57.130 36.364 0.00 0.00 39.98 2.32
122 123 4.523943 AGATGTCATTACTTTGCTGCCAAA 59.476 37.500 0.00 0.00 38.56 3.28
123 124 4.081406 AGATGTCATTACTTTGCTGCCAA 58.919 39.130 0.00 0.00 0.00 4.52
124 125 3.689347 AGATGTCATTACTTTGCTGCCA 58.311 40.909 0.00 0.00 0.00 4.92
125 126 4.418392 CAAGATGTCATTACTTTGCTGCC 58.582 43.478 0.00 0.00 0.00 4.85
126 127 3.855950 GCAAGATGTCATTACTTTGCTGC 59.144 43.478 13.52 0.00 36.31 5.25
127 128 5.050644 TGCAAGATGTCATTACTTTGCTG 57.949 39.130 18.03 0.00 38.16 4.41
128 129 5.393787 CCATGCAAGATGTCATTACTTTGCT 60.394 40.000 18.03 8.04 38.16 3.91
129 130 4.802039 CCATGCAAGATGTCATTACTTTGC 59.198 41.667 13.74 13.74 37.99 3.68
130 131 5.957798 ACCATGCAAGATGTCATTACTTTG 58.042 37.500 0.00 0.00 0.00 2.77
131 132 7.611467 TCTTACCATGCAAGATGTCATTACTTT 59.389 33.333 0.00 0.00 0.00 2.66
132 133 7.112122 TCTTACCATGCAAGATGTCATTACTT 58.888 34.615 0.00 0.00 0.00 2.24
133 134 6.653020 TCTTACCATGCAAGATGTCATTACT 58.347 36.000 0.00 0.00 0.00 2.24
134 135 6.540189 ACTCTTACCATGCAAGATGTCATTAC 59.460 38.462 8.05 0.00 31.82 1.89
135 136 6.539826 CACTCTTACCATGCAAGATGTCATTA 59.460 38.462 8.05 0.00 31.82 1.90
136 137 5.356190 CACTCTTACCATGCAAGATGTCATT 59.644 40.000 8.05 0.00 31.82 2.57
137 138 4.880120 CACTCTTACCATGCAAGATGTCAT 59.120 41.667 8.05 0.00 31.82 3.06
138 139 4.256110 CACTCTTACCATGCAAGATGTCA 58.744 43.478 8.05 0.00 31.82 3.58
139 140 3.064545 GCACTCTTACCATGCAAGATGTC 59.935 47.826 8.05 0.00 39.23 3.06
140 141 3.012518 GCACTCTTACCATGCAAGATGT 58.987 45.455 8.05 6.54 39.23 3.06
141 142 3.011818 TGCACTCTTACCATGCAAGATG 58.988 45.455 8.05 9.33 45.96 2.90
142 143 3.354948 TGCACTCTTACCATGCAAGAT 57.645 42.857 8.05 0.00 45.96 2.40
143 144 2.857186 TGCACTCTTACCATGCAAGA 57.143 45.000 0.00 7.52 45.96 3.02
147 148 0.453390 GGCTTGCACTCTTACCATGC 59.547 55.000 0.00 0.00 39.88 4.06
148 149 1.098050 GGGCTTGCACTCTTACCATG 58.902 55.000 0.00 0.00 0.00 3.66
149 150 0.698238 TGGGCTTGCACTCTTACCAT 59.302 50.000 0.00 0.00 0.00 3.55
150 151 0.036732 CTGGGCTTGCACTCTTACCA 59.963 55.000 0.00 0.00 0.00 3.25
151 152 0.036875 ACTGGGCTTGCACTCTTACC 59.963 55.000 0.00 0.00 0.00 2.85
152 153 1.537202 CAACTGGGCTTGCACTCTTAC 59.463 52.381 0.00 0.00 0.00 2.34
153 154 1.419762 TCAACTGGGCTTGCACTCTTA 59.580 47.619 0.00 0.00 0.00 2.10
154 155 0.183492 TCAACTGGGCTTGCACTCTT 59.817 50.000 0.00 0.00 0.00 2.85
155 156 0.183492 TTCAACTGGGCTTGCACTCT 59.817 50.000 0.00 0.00 0.00 3.24
156 157 0.595095 CTTCAACTGGGCTTGCACTC 59.405 55.000 0.00 0.00 0.00 3.51
157 158 1.458639 GCTTCAACTGGGCTTGCACT 61.459 55.000 0.00 0.00 0.00 4.40
158 159 1.006922 GCTTCAACTGGGCTTGCAC 60.007 57.895 0.00 0.00 0.00 4.57
159 160 1.042003 TTGCTTCAACTGGGCTTGCA 61.042 50.000 0.00 0.00 0.00 4.08
160 161 0.598419 GTTGCTTCAACTGGGCTTGC 60.598 55.000 2.71 0.00 40.73 4.01
161 162 0.318107 CGTTGCTTCAACTGGGCTTG 60.318 55.000 7.91 0.00 41.62 4.01
162 163 1.455383 CCGTTGCTTCAACTGGGCTT 61.455 55.000 7.91 0.00 41.62 4.35
163 164 1.898574 CCGTTGCTTCAACTGGGCT 60.899 57.895 7.91 0.00 41.62 5.19
164 165 2.193536 ACCGTTGCTTCAACTGGGC 61.194 57.895 17.73 0.00 41.62 5.36
165 166 1.654220 CACCGTTGCTTCAACTGGG 59.346 57.895 17.73 11.33 41.62 4.45
166 167 0.817634 TCCACCGTTGCTTCAACTGG 60.818 55.000 14.34 14.34 41.62 4.00
167 168 0.307760 GTCCACCGTTGCTTCAACTG 59.692 55.000 7.91 4.26 41.62 3.16
168 169 0.180406 AGTCCACCGTTGCTTCAACT 59.820 50.000 7.91 0.00 41.62 3.16
169 170 1.529865 GTAGTCCACCGTTGCTTCAAC 59.470 52.381 0.00 0.00 40.54 3.18
170 171 1.414919 AGTAGTCCACCGTTGCTTCAA 59.585 47.619 0.00 0.00 0.00 2.69
171 172 1.045407 AGTAGTCCACCGTTGCTTCA 58.955 50.000 0.00 0.00 0.00 3.02
172 173 1.798813 CAAGTAGTCCACCGTTGCTTC 59.201 52.381 0.00 0.00 0.00 3.86
173 174 1.414919 TCAAGTAGTCCACCGTTGCTT 59.585 47.619 0.00 0.00 0.00 3.91
174 175 1.045407 TCAAGTAGTCCACCGTTGCT 58.955 50.000 0.00 0.00 0.00 3.91
175 176 1.873698 TTCAAGTAGTCCACCGTTGC 58.126 50.000 0.00 0.00 0.00 4.17
176 177 3.617263 GCTATTCAAGTAGTCCACCGTTG 59.383 47.826 0.00 0.00 0.00 4.10
177 178 3.514309 AGCTATTCAAGTAGTCCACCGTT 59.486 43.478 0.00 0.00 0.00 4.44
178 179 3.097614 AGCTATTCAAGTAGTCCACCGT 58.902 45.455 0.00 0.00 0.00 4.83
179 180 3.802948 AGCTATTCAAGTAGTCCACCG 57.197 47.619 0.00 0.00 0.00 4.94
203 204 9.678260 ATCTCTTTGCAAGATTTAGACACTTAT 57.322 29.630 0.00 0.00 36.82 1.73
205 206 7.992754 ATCTCTTTGCAAGATTTAGACACTT 57.007 32.000 0.00 0.00 36.82 3.16
208 209 9.265901 GCTATATCTCTTTGCAAGATTTAGACA 57.734 33.333 19.97 3.06 37.15 3.41
209 210 8.431593 CGCTATATCTCTTTGCAAGATTTAGAC 58.568 37.037 19.97 13.37 37.15 2.59
210 211 8.144478 ACGCTATATCTCTTTGCAAGATTTAGA 58.856 33.333 19.97 11.35 37.15 2.10
211 212 8.219769 CACGCTATATCTCTTTGCAAGATTTAG 58.780 37.037 14.93 14.93 37.61 1.85
212 213 7.171508 CCACGCTATATCTCTTTGCAAGATTTA 59.828 37.037 4.76 1.74 36.82 1.40
213 214 6.017605 CCACGCTATATCTCTTTGCAAGATTT 60.018 38.462 4.76 0.67 36.82 2.17
214 215 5.468072 CCACGCTATATCTCTTTGCAAGATT 59.532 40.000 4.76 0.00 36.82 2.40
215 216 4.993584 CCACGCTATATCTCTTTGCAAGAT 59.006 41.667 0.00 1.56 36.82 2.40
216 217 4.099419 TCCACGCTATATCTCTTTGCAAGA 59.901 41.667 0.00 0.00 35.87 3.02
217 218 4.371786 TCCACGCTATATCTCTTTGCAAG 58.628 43.478 0.00 0.00 0.00 4.01
218 219 4.371786 CTCCACGCTATATCTCTTTGCAA 58.628 43.478 0.00 0.00 0.00 4.08
219 220 3.243873 CCTCCACGCTATATCTCTTTGCA 60.244 47.826 0.00 0.00 0.00 4.08
220 221 3.005897 TCCTCCACGCTATATCTCTTTGC 59.994 47.826 0.00 0.00 0.00 3.68
221 222 4.855715 TCCTCCACGCTATATCTCTTTG 57.144 45.455 0.00 0.00 0.00 2.77
222 223 5.871396 TTTCCTCCACGCTATATCTCTTT 57.129 39.130 0.00 0.00 0.00 2.52
223 224 5.777732 AGATTTCCTCCACGCTATATCTCTT 59.222 40.000 0.00 0.00 0.00 2.85
224 225 5.329399 AGATTTCCTCCACGCTATATCTCT 58.671 41.667 0.00 0.00 0.00 3.10
225 226 5.652994 AGATTTCCTCCACGCTATATCTC 57.347 43.478 0.00 0.00 0.00 2.75
226 227 5.540337 TCAAGATTTCCTCCACGCTATATCT 59.460 40.000 0.00 0.00 0.00 1.98
227 228 5.784177 TCAAGATTTCCTCCACGCTATATC 58.216 41.667 0.00 0.00 0.00 1.63
228 229 5.808366 TCAAGATTTCCTCCACGCTATAT 57.192 39.130 0.00 0.00 0.00 0.86
229 230 5.607939 TTCAAGATTTCCTCCACGCTATA 57.392 39.130 0.00 0.00 0.00 1.31
230 231 4.487714 TTCAAGATTTCCTCCACGCTAT 57.512 40.909 0.00 0.00 0.00 2.97
231 232 3.973206 TTCAAGATTTCCTCCACGCTA 57.027 42.857 0.00 0.00 0.00 4.26
232 233 2.859165 TTCAAGATTTCCTCCACGCT 57.141 45.000 0.00 0.00 0.00 5.07
233 234 2.162408 CCTTTCAAGATTTCCTCCACGC 59.838 50.000 0.00 0.00 0.00 5.34
234 235 3.674997 TCCTTTCAAGATTTCCTCCACG 58.325 45.455 0.00 0.00 0.00 4.94
235 236 5.770162 TCTTTCCTTTCAAGATTTCCTCCAC 59.230 40.000 0.00 0.00 0.00 4.02
236 237 5.952387 TCTTTCCTTTCAAGATTTCCTCCA 58.048 37.500 0.00 0.00 0.00 3.86
237 238 6.435591 ACATCTTTCCTTTCAAGATTTCCTCC 59.564 38.462 0.00 0.00 38.67 4.30
238 239 7.459795 ACATCTTTCCTTTCAAGATTTCCTC 57.540 36.000 0.00 0.00 38.67 3.71
239 240 6.150140 CGACATCTTTCCTTTCAAGATTTCCT 59.850 38.462 0.00 0.00 38.67 3.36
240 241 6.317857 CGACATCTTTCCTTTCAAGATTTCC 58.682 40.000 0.00 0.00 38.67 3.13
241 242 6.072452 ACCGACATCTTTCCTTTCAAGATTTC 60.072 38.462 0.00 0.00 38.67 2.17
242 243 5.770162 ACCGACATCTTTCCTTTCAAGATTT 59.230 36.000 0.00 0.00 38.67 2.17
243 244 5.316987 ACCGACATCTTTCCTTTCAAGATT 58.683 37.500 0.00 0.00 38.67 2.40
244 245 4.911390 ACCGACATCTTTCCTTTCAAGAT 58.089 39.130 0.00 0.00 40.92 2.40
245 246 4.351874 ACCGACATCTTTCCTTTCAAGA 57.648 40.909 0.00 0.00 34.74 3.02
246 247 4.515191 TCAACCGACATCTTTCCTTTCAAG 59.485 41.667 0.00 0.00 0.00 3.02
247 248 4.274950 GTCAACCGACATCTTTCCTTTCAA 59.725 41.667 0.00 0.00 42.13 2.69
248 249 3.813166 GTCAACCGACATCTTTCCTTTCA 59.187 43.478 0.00 0.00 42.13 2.69
249 250 4.406001 GTCAACCGACATCTTTCCTTTC 57.594 45.455 0.00 0.00 42.13 2.62
261 262 3.560068 CCTGGCTATTTATGTCAACCGAC 59.440 47.826 0.00 0.00 42.93 4.79
262 263 3.199071 ACCTGGCTATTTATGTCAACCGA 59.801 43.478 0.00 0.00 0.00 4.69
263 264 3.541632 ACCTGGCTATTTATGTCAACCG 58.458 45.455 0.00 0.00 0.00 4.44
264 265 5.193679 AGAACCTGGCTATTTATGTCAACC 58.806 41.667 0.00 0.00 0.00 3.77
265 266 6.183360 GGAAGAACCTGGCTATTTATGTCAAC 60.183 42.308 0.00 0.00 35.41 3.18
266 267 5.885912 GGAAGAACCTGGCTATTTATGTCAA 59.114 40.000 0.00 0.00 35.41 3.18
267 268 5.045213 TGGAAGAACCTGGCTATTTATGTCA 60.045 40.000 0.00 0.00 39.86 3.58
268 269 5.437060 TGGAAGAACCTGGCTATTTATGTC 58.563 41.667 0.00 0.00 39.86 3.06
269 270 5.450818 TGGAAGAACCTGGCTATTTATGT 57.549 39.130 0.00 0.00 39.86 2.29
270 271 6.152661 TGTTTGGAAGAACCTGGCTATTTATG 59.847 38.462 0.00 0.00 39.86 1.90
271 272 6.252995 TGTTTGGAAGAACCTGGCTATTTAT 58.747 36.000 0.00 0.00 39.86 1.40
272 273 5.636123 TGTTTGGAAGAACCTGGCTATTTA 58.364 37.500 0.00 0.00 39.86 1.40
273 274 4.479158 TGTTTGGAAGAACCTGGCTATTT 58.521 39.130 0.00 0.00 39.86 1.40
274 275 4.112634 TGTTTGGAAGAACCTGGCTATT 57.887 40.909 0.00 0.00 39.86 1.73
275 276 3.806949 TGTTTGGAAGAACCTGGCTAT 57.193 42.857 0.00 0.00 39.86 2.97
276 277 3.137544 TCTTGTTTGGAAGAACCTGGCTA 59.862 43.478 0.00 0.00 39.86 3.93
277 278 2.091885 TCTTGTTTGGAAGAACCTGGCT 60.092 45.455 0.00 0.00 39.86 4.75
278 279 2.306847 TCTTGTTTGGAAGAACCTGGC 58.693 47.619 0.00 0.00 39.86 4.85
279 280 5.316987 ACTATCTTGTTTGGAAGAACCTGG 58.683 41.667 0.00 0.00 35.60 4.45
280 281 6.148480 CAGACTATCTTGTTTGGAAGAACCTG 59.852 42.308 0.00 0.00 35.60 4.00
281 282 6.043243 TCAGACTATCTTGTTTGGAAGAACCT 59.957 38.462 0.00 0.00 35.60 3.50
282 283 6.231211 TCAGACTATCTTGTTTGGAAGAACC 58.769 40.000 0.00 0.00 35.60 3.62
283 284 7.730364 TTCAGACTATCTTGTTTGGAAGAAC 57.270 36.000 0.00 0.00 35.60 3.01
284 285 7.607991 GGATTCAGACTATCTTGTTTGGAAGAA 59.392 37.037 0.00 0.00 35.60 2.52
285 286 7.106239 GGATTCAGACTATCTTGTTTGGAAGA 58.894 38.462 0.00 0.00 36.41 2.87
286 287 6.317391 GGGATTCAGACTATCTTGTTTGGAAG 59.683 42.308 0.00 0.00 0.00 3.46
287 288 6.180472 GGGATTCAGACTATCTTGTTTGGAA 58.820 40.000 0.00 0.00 0.00 3.53
288 289 5.626809 CGGGATTCAGACTATCTTGTTTGGA 60.627 44.000 0.00 0.00 0.00 3.53
289 290 4.572389 CGGGATTCAGACTATCTTGTTTGG 59.428 45.833 0.00 0.00 0.00 3.28
290 291 5.178797 ACGGGATTCAGACTATCTTGTTTG 58.821 41.667 0.00 0.00 0.00 2.93
291 292 5.187967 AGACGGGATTCAGACTATCTTGTTT 59.812 40.000 0.00 0.00 0.00 2.83
292 293 4.712337 AGACGGGATTCAGACTATCTTGTT 59.288 41.667 0.00 0.00 0.00 2.83
293 294 4.282496 AGACGGGATTCAGACTATCTTGT 58.718 43.478 0.00 0.00 0.00 3.16
294 295 4.927978 AGACGGGATTCAGACTATCTTG 57.072 45.455 0.00 0.00 0.00 3.02
295 296 5.010213 GCTTAGACGGGATTCAGACTATCTT 59.990 44.000 0.00 0.00 0.00 2.40
296 297 4.521256 GCTTAGACGGGATTCAGACTATCT 59.479 45.833 0.00 0.00 0.00 1.98
297 298 4.321378 GGCTTAGACGGGATTCAGACTATC 60.321 50.000 0.00 0.00 0.00 2.08
298 299 3.574826 GGCTTAGACGGGATTCAGACTAT 59.425 47.826 0.00 0.00 0.00 2.12
299 300 2.957006 GGCTTAGACGGGATTCAGACTA 59.043 50.000 0.00 0.00 0.00 2.59
300 301 1.757699 GGCTTAGACGGGATTCAGACT 59.242 52.381 0.00 0.00 0.00 3.24
301 302 1.480954 TGGCTTAGACGGGATTCAGAC 59.519 52.381 0.00 0.00 0.00 3.51
302 303 1.860641 TGGCTTAGACGGGATTCAGA 58.139 50.000 0.00 0.00 0.00 3.27
303 304 2.487934 CATGGCTTAGACGGGATTCAG 58.512 52.381 0.00 0.00 0.00 3.02
304 305 1.140852 CCATGGCTTAGACGGGATTCA 59.859 52.381 0.00 0.00 0.00 2.57
305 306 1.884235 CCATGGCTTAGACGGGATTC 58.116 55.000 0.00 0.00 0.00 2.52
306 307 0.179018 GCCATGGCTTAGACGGGATT 60.179 55.000 29.98 0.00 38.26 3.01
307 308 1.451936 GCCATGGCTTAGACGGGAT 59.548 57.895 29.98 0.00 38.26 3.85
308 309 2.742116 GGCCATGGCTTAGACGGGA 61.742 63.158 34.70 0.00 41.60 5.14
309 310 2.203209 GGCCATGGCTTAGACGGG 60.203 66.667 34.70 0.00 41.60 5.28
310 311 2.588877 CGGCCATGGCTTAGACGG 60.589 66.667 34.70 12.45 41.60 4.79
311 312 2.588877 CCGGCCATGGCTTAGACG 60.589 66.667 34.70 27.29 41.60 4.18
320 321 4.559063 CTGGAGGAGCCGGCCATG 62.559 72.222 26.15 2.55 40.66 3.66
326 327 3.854669 AATCCGCTGGAGGAGCCG 61.855 66.667 3.76 0.00 46.01 5.52
327 328 2.203126 CAATCCGCTGGAGGAGCC 60.203 66.667 3.76 0.00 46.01 4.70
328 329 2.203126 CCAATCCGCTGGAGGAGC 60.203 66.667 3.76 0.00 44.55 4.70
329 330 0.745845 CAACCAATCCGCTGGAGGAG 60.746 60.000 8.99 1.38 44.55 3.69
330 331 1.299648 CAACCAATCCGCTGGAGGA 59.700 57.895 8.99 0.00 45.54 3.71
331 332 1.750399 CCAACCAATCCGCTGGAGG 60.750 63.158 0.00 0.00 38.96 4.30
332 333 2.409870 GCCAACCAATCCGCTGGAG 61.410 63.158 0.00 0.00 38.96 3.86
333 334 2.361104 GCCAACCAATCCGCTGGA 60.361 61.111 0.00 0.00 38.96 3.86
334 335 3.814268 CGCCAACCAATCCGCTGG 61.814 66.667 0.00 0.00 42.68 4.85
335 336 4.481112 GCGCCAACCAATCCGCTG 62.481 66.667 0.00 0.00 42.83 5.18
337 338 4.481112 CAGCGCCAACCAATCCGC 62.481 66.667 2.29 0.00 46.14 5.54
338 339 3.039202 GACAGCGCCAACCAATCCG 62.039 63.158 2.29 0.00 0.00 4.18
339 340 0.392461 TAGACAGCGCCAACCAATCC 60.392 55.000 2.29 0.00 0.00 3.01
340 341 1.599542 GATAGACAGCGCCAACCAATC 59.400 52.381 2.29 0.00 0.00 2.67
341 342 1.668419 GATAGACAGCGCCAACCAAT 58.332 50.000 2.29 0.00 0.00 3.16
342 343 0.739462 CGATAGACAGCGCCAACCAA 60.739 55.000 2.29 0.00 39.76 3.67
343 344 1.153647 CGATAGACAGCGCCAACCA 60.154 57.895 2.29 0.00 39.76 3.67
344 345 1.141019 TCGATAGACAGCGCCAACC 59.859 57.895 2.29 0.00 42.67 3.77
345 346 4.806571 TCGATAGACAGCGCCAAC 57.193 55.556 2.29 0.00 42.67 3.77
354 355 6.953982 ACTCAAGAAGGAGCCATCGATAGAC 61.954 48.000 0.00 0.00 43.34 2.59
355 356 4.933476 ACTCAAGAAGGAGCCATCGATAGA 60.933 45.833 0.00 0.00 44.20 1.98
356 357 3.320541 ACTCAAGAAGGAGCCATCGATAG 59.679 47.826 0.00 0.00 38.50 2.08
357 358 3.300388 ACTCAAGAAGGAGCCATCGATA 58.700 45.455 0.00 0.00 38.50 2.92
358 359 2.102252 GACTCAAGAAGGAGCCATCGAT 59.898 50.000 0.00 0.00 38.50 3.59
359 360 1.478510 GACTCAAGAAGGAGCCATCGA 59.521 52.381 0.00 0.00 38.50 3.59
360 361 1.205655 TGACTCAAGAAGGAGCCATCG 59.794 52.381 0.00 0.00 38.50 3.84
361 362 3.055530 TCTTGACTCAAGAAGGAGCCATC 60.056 47.826 17.58 0.00 45.84 3.51
362 363 2.909006 TCTTGACTCAAGAAGGAGCCAT 59.091 45.455 17.58 0.00 45.84 4.40
363 364 2.329267 TCTTGACTCAAGAAGGAGCCA 58.671 47.619 17.58 0.00 45.84 4.75
369 370 9.160565 GAAGCACTTCCATCTTGACTCAAGAAG 62.161 44.444 22.47 18.32 41.86 2.85
370 371 7.459012 GAAGCACTTCCATCTTGACTCAAGAA 61.459 42.308 22.47 6.57 41.86 2.52
371 372 6.028412 GAAGCACTTCCATCTTGACTCAAGA 61.028 44.000 21.22 21.22 42.26 3.02
372 373 3.672808 AGCACTTCCATCTTGACTCAAG 58.327 45.455 12.02 12.02 42.25 3.02
373 374 3.777106 AGCACTTCCATCTTGACTCAA 57.223 42.857 0.00 0.00 0.00 3.02
374 375 3.071457 TGAAGCACTTCCATCTTGACTCA 59.929 43.478 7.88 0.00 38.77 3.41
375 376 3.668447 TGAAGCACTTCCATCTTGACTC 58.332 45.455 7.88 0.00 38.77 3.36
376 377 3.672808 CTGAAGCACTTCCATCTTGACT 58.327 45.455 7.88 0.00 38.77 3.41
377 378 2.161211 GCTGAAGCACTTCCATCTTGAC 59.839 50.000 7.88 0.00 41.59 3.18
378 379 2.039480 AGCTGAAGCACTTCCATCTTGA 59.961 45.455 7.88 0.00 45.16 3.02
379 380 2.434428 AGCTGAAGCACTTCCATCTTG 58.566 47.619 7.88 0.00 45.16 3.02
380 381 2.875094 AGCTGAAGCACTTCCATCTT 57.125 45.000 7.88 0.00 45.16 2.40
381 382 2.836981 ACTAGCTGAAGCACTTCCATCT 59.163 45.455 7.88 5.05 45.16 2.90
382 383 3.258971 ACTAGCTGAAGCACTTCCATC 57.741 47.619 7.88 0.00 45.16 3.51
383 384 4.444022 CCATACTAGCTGAAGCACTTCCAT 60.444 45.833 7.88 0.00 45.16 3.41
384 385 3.118629 CCATACTAGCTGAAGCACTTCCA 60.119 47.826 7.88 0.00 45.16 3.53
385 386 3.118592 ACCATACTAGCTGAAGCACTTCC 60.119 47.826 7.88 0.00 45.16 3.46
386 387 3.868077 CACCATACTAGCTGAAGCACTTC 59.132 47.826 4.90 3.37 45.16 3.01
387 388 3.866651 CACCATACTAGCTGAAGCACTT 58.133 45.455 4.90 0.00 45.16 3.16
388 389 2.419297 GCACCATACTAGCTGAAGCACT 60.419 50.000 4.90 0.00 45.16 4.40
389 390 1.936547 GCACCATACTAGCTGAAGCAC 59.063 52.381 4.90 0.00 45.16 4.40
390 391 1.833630 AGCACCATACTAGCTGAAGCA 59.166 47.619 4.90 0.00 45.16 3.91
391 392 2.611225 AGCACCATACTAGCTGAAGC 57.389 50.000 0.00 0.00 37.20 3.86
392 393 5.521906 TCTTAGCACCATACTAGCTGAAG 57.478 43.478 0.00 0.00 39.30 3.02
393 394 5.163405 CCTTCTTAGCACCATACTAGCTGAA 60.163 44.000 0.00 0.00 39.30 3.02
394 395 4.342378 CCTTCTTAGCACCATACTAGCTGA 59.658 45.833 0.00 0.00 39.30 4.26
395 396 4.502259 CCCTTCTTAGCACCATACTAGCTG 60.502 50.000 0.00 0.00 39.30 4.24
396 397 3.643792 CCCTTCTTAGCACCATACTAGCT 59.356 47.826 0.00 0.00 42.14 3.32
397 398 3.641906 TCCCTTCTTAGCACCATACTAGC 59.358 47.826 0.00 0.00 0.00 3.42
398 399 5.141182 TCTCCCTTCTTAGCACCATACTAG 58.859 45.833 0.00 0.00 0.00 2.57
399 400 5.138758 TCTCCCTTCTTAGCACCATACTA 57.861 43.478 0.00 0.00 0.00 1.82
400 401 3.995636 TCTCCCTTCTTAGCACCATACT 58.004 45.455 0.00 0.00 0.00 2.12
401 402 4.755266 TTCTCCCTTCTTAGCACCATAC 57.245 45.455 0.00 0.00 0.00 2.39
402 403 4.103153 CCATTCTCCCTTCTTAGCACCATA 59.897 45.833 0.00 0.00 0.00 2.74
403 404 3.117738 CCATTCTCCCTTCTTAGCACCAT 60.118 47.826 0.00 0.00 0.00 3.55
404 405 2.239654 CCATTCTCCCTTCTTAGCACCA 59.760 50.000 0.00 0.00 0.00 4.17
405 406 2.505819 TCCATTCTCCCTTCTTAGCACC 59.494 50.000 0.00 0.00 0.00 5.01
406 407 3.914426 TCCATTCTCCCTTCTTAGCAC 57.086 47.619 0.00 0.00 0.00 4.40
407 408 4.040047 TGATCCATTCTCCCTTCTTAGCA 58.960 43.478 0.00 0.00 0.00 3.49
408 409 4.696479 TGATCCATTCTCCCTTCTTAGC 57.304 45.455 0.00 0.00 0.00 3.09
409 410 6.835174 TCATTGATCCATTCTCCCTTCTTAG 58.165 40.000 0.00 0.00 0.00 2.18
410 411 6.829985 TCATTGATCCATTCTCCCTTCTTA 57.170 37.500 0.00 0.00 0.00 2.10
411 412 5.722172 TCATTGATCCATTCTCCCTTCTT 57.278 39.130 0.00 0.00 0.00 2.52
412 413 5.926580 ATCATTGATCCATTCTCCCTTCT 57.073 39.130 0.00 0.00 0.00 2.85
413 414 8.521176 CAAATATCATTGATCCATTCTCCCTTC 58.479 37.037 1.55 0.00 31.84 3.46
414 415 7.039223 GCAAATATCATTGATCCATTCTCCCTT 60.039 37.037 1.55 0.00 31.84 3.95
415 416 6.436532 GCAAATATCATTGATCCATTCTCCCT 59.563 38.462 1.55 0.00 31.84 4.20
416 417 6.624423 CGCAAATATCATTGATCCATTCTCCC 60.624 42.308 1.55 0.00 31.84 4.30
417 418 6.320171 CGCAAATATCATTGATCCATTCTCC 58.680 40.000 1.55 0.00 31.84 3.71
418 419 6.320171 CCGCAAATATCATTGATCCATTCTC 58.680 40.000 1.55 0.00 31.84 2.87
419 420 5.336213 GCCGCAAATATCATTGATCCATTCT 60.336 40.000 1.55 0.00 31.84 2.40
420 421 4.860907 GCCGCAAATATCATTGATCCATTC 59.139 41.667 1.55 0.00 31.84 2.67
421 422 4.281435 TGCCGCAAATATCATTGATCCATT 59.719 37.500 1.55 0.00 31.84 3.16
422 423 3.827876 TGCCGCAAATATCATTGATCCAT 59.172 39.130 1.55 0.00 31.84 3.41
423 424 3.220940 TGCCGCAAATATCATTGATCCA 58.779 40.909 1.55 0.00 31.84 3.41
424 425 3.921119 TGCCGCAAATATCATTGATCC 57.079 42.857 1.55 0.00 31.84 3.36
425 426 8.146479 TCTATATGCCGCAAATATCATTGATC 57.854 34.615 1.55 0.00 31.84 2.92
426 427 8.687292 ATCTATATGCCGCAAATATCATTGAT 57.313 30.769 4.28 4.28 31.84 2.57
427 428 9.045223 GTATCTATATGCCGCAAATATCATTGA 57.955 33.333 0.00 0.00 31.84 2.57
428 429 8.829612 TGTATCTATATGCCGCAAATATCATTG 58.170 33.333 0.00 0.00 0.00 2.82
429 430 8.962884 TGTATCTATATGCCGCAAATATCATT 57.037 30.769 0.00 0.00 0.00 2.57
430 431 9.212641 GATGTATCTATATGCCGCAAATATCAT 57.787 33.333 0.00 0.00 0.00 2.45
431 432 8.424133 AGATGTATCTATATGCCGCAAATATCA 58.576 33.333 0.00 0.00 34.85 2.15
432 433 8.824159 AGATGTATCTATATGCCGCAAATATC 57.176 34.615 0.00 0.00 34.85 1.63
433 434 9.265901 GAAGATGTATCTATATGCCGCAAATAT 57.734 33.333 0.00 0.00 35.76 1.28
434 435 8.257306 TGAAGATGTATCTATATGCCGCAAATA 58.743 33.333 0.00 0.00 35.76 1.40
435 436 7.105588 TGAAGATGTATCTATATGCCGCAAAT 58.894 34.615 0.00 0.00 35.76 2.32
436 437 6.463360 TGAAGATGTATCTATATGCCGCAAA 58.537 36.000 0.00 0.00 35.76 3.68
437 438 6.036577 TGAAGATGTATCTATATGCCGCAA 57.963 37.500 0.00 0.00 35.76 4.85
438 439 5.659440 TGAAGATGTATCTATATGCCGCA 57.341 39.130 0.00 0.00 35.76 5.69
439 440 6.035435 CAGTTGAAGATGTATCTATATGCCGC 59.965 42.308 0.00 0.00 35.76 6.53
440 441 6.035435 GCAGTTGAAGATGTATCTATATGCCG 59.965 42.308 0.00 0.00 35.76 5.69
441 442 6.875726 TGCAGTTGAAGATGTATCTATATGCC 59.124 38.462 0.00 0.00 35.76 4.40
442 443 7.895975 TGCAGTTGAAGATGTATCTATATGC 57.104 36.000 0.00 3.49 35.76 3.14
443 444 9.264719 TGTTGCAGTTGAAGATGTATCTATATG 57.735 33.333 0.00 0.00 35.76 1.78
444 445 9.836864 TTGTTGCAGTTGAAGATGTATCTATAT 57.163 29.630 0.00 0.00 35.76 0.86
445 446 9.098355 GTTGTTGCAGTTGAAGATGTATCTATA 57.902 33.333 0.00 0.00 35.76 1.31
446 447 7.201556 CGTTGTTGCAGTTGAAGATGTATCTAT 60.202 37.037 0.00 0.00 35.76 1.98
447 448 6.090763 CGTTGTTGCAGTTGAAGATGTATCTA 59.909 38.462 0.00 0.00 35.76 1.98
448 449 5.106948 CGTTGTTGCAGTTGAAGATGTATCT 60.107 40.000 0.00 0.00 39.22 1.98
449 450 5.082059 CGTTGTTGCAGTTGAAGATGTATC 58.918 41.667 0.00 0.00 0.00 2.24
450 451 4.613622 GCGTTGTTGCAGTTGAAGATGTAT 60.614 41.667 0.00 0.00 34.15 2.29
451 452 3.303725 GCGTTGTTGCAGTTGAAGATGTA 60.304 43.478 0.00 0.00 34.15 2.29
452 453 2.541588 GCGTTGTTGCAGTTGAAGATGT 60.542 45.455 0.00 0.00 34.15 3.06
453 454 2.046313 GCGTTGTTGCAGTTGAAGATG 58.954 47.619 0.00 0.00 34.15 2.90
454 455 1.001378 GGCGTTGTTGCAGTTGAAGAT 60.001 47.619 0.00 0.00 36.28 2.40
455 456 0.380378 GGCGTTGTTGCAGTTGAAGA 59.620 50.000 0.00 0.00 36.28 2.87
456 457 0.594796 GGGCGTTGTTGCAGTTGAAG 60.595 55.000 0.00 0.00 36.28 3.02
457 458 1.034838 AGGGCGTTGTTGCAGTTGAA 61.035 50.000 0.00 0.00 36.28 2.69
458 459 0.179043 TAGGGCGTTGTTGCAGTTGA 60.179 50.000 0.00 0.00 36.28 3.18
459 460 0.238289 CTAGGGCGTTGTTGCAGTTG 59.762 55.000 0.00 0.00 36.28 3.16
460 461 0.107831 TCTAGGGCGTTGTTGCAGTT 59.892 50.000 0.00 0.00 36.28 3.16
461 462 0.107831 TTCTAGGGCGTTGTTGCAGT 59.892 50.000 0.00 0.00 36.28 4.40
462 463 0.798776 CTTCTAGGGCGTTGTTGCAG 59.201 55.000 0.00 0.00 36.28 4.41
463 464 1.234615 GCTTCTAGGGCGTTGTTGCA 61.235 55.000 0.00 0.00 36.28 4.08
464 465 1.502190 GCTTCTAGGGCGTTGTTGC 59.498 57.895 0.00 0.00 0.00 4.17
465 466 1.787847 CGCTTCTAGGGCGTTGTTG 59.212 57.895 18.15 0.00 46.37 3.33
466 467 4.278956 CGCTTCTAGGGCGTTGTT 57.721 55.556 18.15 0.00 46.37 2.83
475 476 5.698089 TCATAGCATGAAATTCCGCTTCTAG 59.302 40.000 11.41 0.00 36.11 2.43
487 488 3.025262 TGCCTTGCATCATAGCATGAAA 58.975 40.909 0.00 0.00 45.19 2.69
507 508 3.177272 CTCGATTGCCAGCGCCATG 62.177 63.158 2.29 0.00 0.00 3.66
516 517 4.024809 GGTTTATCTAAGTGCTCGATTGCC 60.025 45.833 0.00 0.00 0.00 4.52
530 531 9.775539 ATCTGCCTAGAATGATAGGTTTATCTA 57.224 33.333 0.00 0.00 43.74 1.98
558 561 1.340405 ACATGGCCAAGGCTGAAGTAG 60.340 52.381 10.96 0.00 41.60 2.57
565 568 0.698238 TCAAGTACATGGCCAAGGCT 59.302 50.000 10.96 5.40 41.60 4.58
568 571 1.281867 TCCCTCAAGTACATGGCCAAG 59.718 52.381 10.96 8.43 0.00 3.61
591 594 1.686355 AGGCCGATCTAGAGTGTGAG 58.314 55.000 0.00 0.00 0.00 3.51
677 684 6.258354 TGTTCTACCCTATTCTGACACCTAA 58.742 40.000 0.00 0.00 0.00 2.69
734 741 7.254932 GGTTCGAGTTCAACTATACCGTAGTAT 60.255 40.741 0.00 0.00 42.05 2.12
739 746 3.119352 GGGTTCGAGTTCAACTATACCGT 60.119 47.826 0.00 0.00 0.00 4.83
746 753 1.718280 AGGAGGGTTCGAGTTCAACT 58.282 50.000 0.00 0.00 0.00 3.16
758 765 2.065799 AATCCTCACAACAAGGAGGGT 58.934 47.619 7.76 0.00 46.56 4.34
903 919 1.416243 ACACACGTCTTCACCCCTAA 58.584 50.000 0.00 0.00 0.00 2.69
937 964 3.308053 CCACACGTCTTCATGATGATGAC 59.692 47.826 28.34 23.81 43.79 3.06
1029 1056 1.480545 GAGGAAGGAACAGGAGAGAGC 59.519 57.143 0.00 0.00 0.00 4.09
1039 1066 2.573915 ACTGATTCTGGGAGGAAGGAAC 59.426 50.000 0.00 0.00 0.00 3.62
1135 1168 1.746220 GAGGAGAGAGCGAGCAAGTTA 59.254 52.381 0.00 0.00 0.00 2.24
1142 1175 1.891919 CGAGGGAGGAGAGAGCGAG 60.892 68.421 0.00 0.00 0.00 5.03
1191 1224 2.585247 CCCGGATCGAAGCGGAAC 60.585 66.667 0.73 0.00 32.50 3.62
1344 1379 3.424703 TCCTTGGAGCAGAAAATTCCAG 58.575 45.455 0.00 0.00 41.68 3.86
1481 1520 1.032114 AAACCCAGCCTAAGCGCATC 61.032 55.000 11.47 0.00 46.67 3.91
1512 1551 2.462503 CCATGCATTTGCTGGCAAC 58.537 52.632 7.56 0.00 44.20 4.17
1530 1569 1.034292 GGTGCCATGGGAAGAGAAGC 61.034 60.000 15.13 0.00 0.00 3.86
1575 1755 7.828508 ACGGAAGATAGGTGTAATACATACA 57.171 36.000 0.00 0.00 42.22 2.29
1578 1758 9.310449 AGAATACGGAAGATAGGTGTAATACAT 57.690 33.333 0.00 0.00 0.00 2.29
1579 1759 8.701908 AGAATACGGAAGATAGGTGTAATACA 57.298 34.615 0.00 0.00 0.00 2.29
1580 1760 8.790718 TGAGAATACGGAAGATAGGTGTAATAC 58.209 37.037 0.00 0.00 0.00 1.89
1582 1762 7.724506 TCTGAGAATACGGAAGATAGGTGTAAT 59.275 37.037 0.00 0.00 0.00 1.89
1583 1763 7.058525 TCTGAGAATACGGAAGATAGGTGTAA 58.941 38.462 0.00 0.00 0.00 2.41
1584 1764 6.598503 TCTGAGAATACGGAAGATAGGTGTA 58.401 40.000 0.00 0.00 0.00 2.90
1627 1913 7.625469 TCAATGGTAATACATACTGGTGACAA 58.375 34.615 0.00 0.00 42.06 3.18
1648 1934 9.471702 AACTCTGATGGAAAATAACATCTCAAT 57.528 29.630 0.00 0.00 42.96 2.57
1687 1973 7.671302 ACCGTCAGCTATGAATAATGAGTTAT 58.329 34.615 0.00 0.00 37.14 1.89
1809 2097 7.274250 CCTAGATTAGTTTTCAATTGCAACTGC 59.726 37.037 23.19 15.75 42.50 4.40
1812 2100 7.542130 CCACCTAGATTAGTTTTCAATTGCAAC 59.458 37.037 0.00 6.41 0.00 4.17
1847 2135 3.425758 CGCCCGGACAAAGAAATAAGAAC 60.426 47.826 0.73 0.00 0.00 3.01
1855 2143 1.146485 TGAACGCCCGGACAAAGAA 59.854 52.632 0.73 0.00 0.00 2.52
1865 2153 3.565516 GAAGATTGAAAAGTGAACGCCC 58.434 45.455 0.00 0.00 0.00 6.13
1867 2155 4.223320 TGGAAGATTGAAAAGTGAACGC 57.777 40.909 0.00 0.00 0.00 4.84
1872 2160 7.486802 AAATGCTTTGGAAGATTGAAAAGTG 57.513 32.000 0.00 0.00 33.21 3.16
2016 2304 2.099141 TTGATCAACAGGGAAGCTCG 57.901 50.000 3.38 0.00 0.00 5.03
2124 2416 3.247948 TGAAGGACTAGGTACCACACA 57.752 47.619 15.94 0.00 0.00 3.72
2217 2509 1.200020 CGGCTAACTTTCTTTGGCTGG 59.800 52.381 0.00 0.00 36.08 4.85
2420 2713 3.181466 GGAAATTTGGTTCAGGTTGCTGT 60.181 43.478 0.00 0.00 0.00 4.40
2477 2773 4.080863 GGATGTGAAGATGAACCACCTACT 60.081 45.833 0.00 0.00 0.00 2.57
2735 3031 7.542824 TGAAGACGAACGTTCAAATATATGTCA 59.457 33.333 26.71 13.53 29.66 3.58
2750 3046 3.372954 ACTCTCAGTTTGAAGACGAACG 58.627 45.455 0.00 0.00 43.12 3.95
2851 3147 1.030488 CCAGCCTTGATCCAGCACTG 61.030 60.000 7.65 7.65 0.00 3.66
2853 3149 2.413142 GCCAGCCTTGATCCAGCAC 61.413 63.158 0.00 0.00 0.00 4.40
2945 3241 9.525826 AAGAAGAATTGAGGATTATGAAACTGT 57.474 29.630 0.00 0.00 0.00 3.55
2968 3264 9.944376 AGCTTGTTCAGTATTATTACTTGAAGA 57.056 29.630 0.00 0.69 36.50 2.87
3012 3309 4.946784 ATCTTTCGTACAACTTGGATGC 57.053 40.909 0.00 0.00 0.00 3.91
3041 3338 4.625607 AAGGAGTCTTCAAGGTGTTAGG 57.374 45.455 0.00 0.00 0.00 2.69
3133 4061 5.657474 CAAATTTGATGGTCTAAGCAGCAT 58.343 37.500 13.08 0.00 41.82 3.79
3245 4220 0.033601 TGGGTTTGTCCAGCAAGTGT 60.034 50.000 0.00 0.00 38.47 3.55
3278 4253 8.039603 ACGATGTTGTCTGCTCAATATAAAAA 57.960 30.769 0.00 0.00 31.29 1.94
3283 4258 5.877012 AGAAACGATGTTGTCTGCTCAATAT 59.123 36.000 0.00 0.00 33.20 1.28
3366 4718 8.278639 TCAACTAAAATATTCAGGGATTAGGCA 58.721 33.333 7.08 0.00 0.00 4.75
3403 4755 5.686159 AGAAATGAGTGCTGAAGTGAAAG 57.314 39.130 0.00 0.00 0.00 2.62
3420 4772 7.936847 TCATGCCCGACTATAATTTGTAGAAAT 59.063 33.333 7.13 0.00 32.87 2.17
3521 4873 9.832445 ATCAACCTACATAATCGTTCTATTGTT 57.168 29.630 0.00 0.00 0.00 2.83
3522 4874 9.832445 AATCAACCTACATAATCGTTCTATTGT 57.168 29.630 0.00 0.00 0.00 2.71
3571 4923 6.813649 TGCATCTGTTTTCTACTCATCAGTAC 59.186 38.462 0.00 0.00 33.62 2.73
3961 5359 5.376854 AGCTATCATGTTGAACAACCAAC 57.623 39.130 0.62 0.00 44.84 3.77
4225 5625 6.701145 TGTGTCAGCAATAACCTTTTGTTA 57.299 33.333 0.00 0.00 43.35 2.41
4230 5630 5.536161 AGAACATGTGTCAGCAATAACCTTT 59.464 36.000 0.00 0.00 0.00 3.11
4500 5906 3.073274 AGCCCATTTAGAGACACCAAC 57.927 47.619 0.00 0.00 0.00 3.77
4634 6040 5.855045 AGACTACTGGTTACAAACTTGAGG 58.145 41.667 0.00 0.00 0.00 3.86
4880 6286 2.925170 AACCTGTCCTCAGCGGCT 60.925 61.111 0.00 0.00 40.09 5.52
5007 6413 2.665165 AGGAAACCAAGCACAACATCA 58.335 42.857 0.00 0.00 0.00 3.07
5013 6419 0.746063 CTGCAAGGAAACCAAGCACA 59.254 50.000 0.00 0.00 33.41 4.57
5088 6494 2.113562 TGTGCAGGCATGTCAGCA 59.886 55.556 13.91 13.91 35.83 4.41
5113 6519 1.134670 GTACCTGGGCAGAGACATGAC 60.135 57.143 0.00 0.00 0.00 3.06
5118 6524 1.407437 CCATTGTACCTGGGCAGAGAC 60.407 57.143 0.00 0.00 0.00 3.36
5126 6532 0.392998 AGCTTCGCCATTGTACCTGG 60.393 55.000 7.12 7.12 36.81 4.45
5192 6598 0.110486 ACAAAGGTCGGCAGGTCAAT 59.890 50.000 0.00 0.00 0.00 2.57
5209 6615 3.393800 GAGCTTCTTGTACTTCTGCACA 58.606 45.455 0.00 0.00 0.00 4.57
5257 6663 1.984570 CTTGCCGGAGAGGTGGAGA 60.985 63.158 5.05 0.00 43.70 3.71
5345 6751 2.167487 GTCAAAAACAGGGCAAGGAACA 59.833 45.455 0.00 0.00 0.00 3.18
5400 6806 0.947244 GCCCGTGAAATCAGCCATAG 59.053 55.000 0.00 0.00 0.00 2.23
5410 6816 4.096231 CAGATTGTGATTATGCCCGTGAAA 59.904 41.667 0.00 0.00 0.00 2.69
5425 6831 4.397103 ACCAATCACACATAGCAGATTGTG 59.603 41.667 11.59 1.74 46.76 3.33
5476 6882 2.163509 AGAGCTCAGCTTGTTCTCGTA 58.836 47.619 17.77 0.00 39.88 3.43
5478 6884 1.991965 GAAGAGCTCAGCTTGTTCTCG 59.008 52.381 17.77 0.00 39.88 4.04
5542 6949 5.520288 CCGATGGCTAGATAAATTATGTCCG 59.480 44.000 0.00 0.00 0.00 4.79
5616 7023 3.715628 ACACTGAAGTTTCAATGTGCC 57.284 42.857 8.02 0.00 44.81 5.01
5617 7024 4.423732 ACAACACTGAAGTTTCAATGTGC 58.576 39.130 9.40 0.00 45.66 4.57
5618 7025 5.740569 CAGACAACACTGAAGTTTCAATGTG 59.259 40.000 9.40 10.19 45.66 3.21
5684 7092 1.861575 GTTCCTAGCTGCTGCGAATAC 59.138 52.381 13.43 0.15 45.42 1.89
5721 7141 5.178061 CAGGGCAAATCCAGTTTATTTTCC 58.822 41.667 0.00 0.00 36.21 3.13
5726 7155 3.365472 GGACAGGGCAAATCCAGTTTAT 58.635 45.455 0.00 0.00 36.21 1.40
5854 7434 3.135530 AGGGAGTAGATTCAATGGCTCAC 59.864 47.826 0.00 0.00 0.00 3.51
5876 7457 4.158949 TCGAGACAAGTAATTCCGAATGGA 59.841 41.667 0.00 0.00 44.61 3.41
5877 7458 4.430007 TCGAGACAAGTAATTCCGAATGG 58.570 43.478 0.00 0.00 0.00 3.16
5880 7461 6.128391 CCATTTTCGAGACAAGTAATTCCGAA 60.128 38.462 0.00 0.00 33.57 4.30
5881 7462 5.350365 CCATTTTCGAGACAAGTAATTCCGA 59.650 40.000 0.00 0.00 0.00 4.55
5882 7463 5.350365 TCCATTTTCGAGACAAGTAATTCCG 59.650 40.000 0.00 0.00 0.00 4.30
5883 7464 6.737254 TCCATTTTCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
5884 7465 7.752695 ACATCCATTTTCGAGACAAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
5885 7466 7.687941 ACATCCATTTTCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
5886 7467 8.964476 ATACATCCATTTTCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
5887 7468 8.258007 AGATACATCCATTTTCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
5888 7469 7.782049 AGATACATCCATTTTCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
5889 7470 6.644347 AGATACATCCATTTTCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
5892 7473 7.348080 ACTAGATACATCCATTTTCGAGACA 57.652 36.000 0.00 0.00 0.00 3.41
5920 7518 9.880157 TTGCTTACCTCTATCTAAACGTATTTT 57.120 29.630 0.00 0.00 0.00 1.82
5922 7520 9.477484 CATTGCTTACCTCTATCTAAACGTATT 57.523 33.333 0.00 0.00 0.00 1.89
5925 7523 6.875076 ACATTGCTTACCTCTATCTAAACGT 58.125 36.000 0.00 0.00 0.00 3.99
5926 7524 7.491372 TGAACATTGCTTACCTCTATCTAAACG 59.509 37.037 0.00 0.00 0.00 3.60
5927 7525 8.718102 TGAACATTGCTTACCTCTATCTAAAC 57.282 34.615 0.00 0.00 0.00 2.01
5928 7526 9.733556 TTTGAACATTGCTTACCTCTATCTAAA 57.266 29.630 0.00 0.00 0.00 1.85
5929 7527 9.733556 TTTTGAACATTGCTTACCTCTATCTAA 57.266 29.630 0.00 0.00 0.00 2.10
5930 7528 9.383519 CTTTTGAACATTGCTTACCTCTATCTA 57.616 33.333 0.00 0.00 0.00 1.98
5931 7529 7.148171 GCTTTTGAACATTGCTTACCTCTATCT 60.148 37.037 0.00 0.00 0.00 1.98
5943 7543 4.433079 CGTTTAACGCTTTTGAACATTGC 58.567 39.130 4.11 0.00 33.65 3.56
5957 7557 3.905784 ACAGACTAGAACCCGTTTAACG 58.094 45.455 10.83 10.83 42.11 3.18
5988 7593 0.103208 GGCTCGACTAGTGATGGTGG 59.897 60.000 0.00 0.00 0.00 4.61
6001 7606 0.457443 CATCTACTGCTGTGGCTCGA 59.543 55.000 6.48 0.00 39.59 4.04
6002 7607 2.969157 CATCTACTGCTGTGGCTCG 58.031 57.895 6.48 0.00 39.59 5.03
6053 7666 3.505480 AAGGATCAGGCAATGGATCTC 57.495 47.619 0.00 0.00 39.82 2.75
6106 7719 3.086600 GGGGGAGCACTCTGGGAG 61.087 72.222 0.00 0.00 35.52 4.30
6276 7892 4.210537 CAGGTTTTCGACAAGTACGTGAAT 59.789 41.667 16.00 0.00 0.00 2.57
6320 11570 3.376540 CCAGACGAAATCGAGGATCTTC 58.623 50.000 10.16 0.00 43.02 2.87
6369 11619 4.437239 CAGAGGAGCTTGTCGATAACATT 58.563 43.478 0.00 0.00 37.82 2.71
6381 11631 0.607620 GTGTCTCTGCAGAGGAGCTT 59.392 55.000 36.92 0.00 42.30 3.74
6456 11706 0.034896 TGAAGGCGAAGGTGGAAGAC 59.965 55.000 0.00 0.00 0.00 3.01
6490 11740 1.743252 GTTCTGGCTCTTCTGGGCG 60.743 63.158 0.00 0.00 0.00 6.13
6500 11750 0.108585 ATCACACCGTTGTTCTGGCT 59.891 50.000 0.00 0.00 31.66 4.75
6518 11769 6.226052 TGCTCATTCATAAGTCGCTGATTAT 58.774 36.000 0.00 0.00 0.00 1.28
6526 11777 5.536554 ACTTGTTGCTCATTCATAAGTCG 57.463 39.130 0.00 0.00 0.00 4.18
6546 11797 8.999895 ACTATGTGGTTCCCAATTTATACTACT 58.000 33.333 0.00 0.00 34.18 2.57
6547 11798 9.052759 CACTATGTGGTTCCCAATTTATACTAC 57.947 37.037 0.00 0.00 34.18 2.73
6548 11799 8.774183 ACACTATGTGGTTCCCAATTTATACTA 58.226 33.333 2.72 0.00 37.94 1.82
6558 11809 1.143889 TGCAACACTATGTGGTTCCCA 59.856 47.619 2.72 0.00 37.94 4.37
6560 11811 1.812571 CCTGCAACACTATGTGGTTCC 59.187 52.381 2.72 0.00 37.94 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.