Multiple sequence alignment - TraesCS4A01G002200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G002200 chr4A 100.000 4606 0 0 1 4606 1912389 1907784 0.000000e+00 8506.0
1 TraesCS4A01G002200 chr4A 89.222 167 15 3 1857 2021 503630588 503630423 6.040000e-49 206.0
2 TraesCS4A01G002200 chr4D 90.941 1722 94 28 172 1858 469567892 469569586 0.000000e+00 2259.0
3 TraesCS4A01G002200 chr4D 88.722 1197 97 19 2657 3823 469570399 469571587 0.000000e+00 1428.0
4 TraesCS4A01G002200 chr4D 85.479 365 20 8 4087 4451 469572352 469572683 2.640000e-92 350.0
5 TraesCS4A01G002200 chr4D 91.724 145 6 5 3890 4028 469571738 469571882 3.640000e-46 196.0
6 TraesCS4A01G002200 chr4D 83.766 154 11 7 1 141 469564258 469564410 2.890000e-27 134.0
7 TraesCS4A01G002200 chr4D 87.850 107 9 2 3113 3218 469570749 469570852 6.260000e-24 122.0
8 TraesCS4A01G002200 chr4D 100.000 29 0 0 3837 3865 469571660 469571688 2.000000e-03 54.7
9 TraesCS4A01G002200 chr4B 89.333 1650 136 20 224 1856 590423300 590424926 0.000000e+00 2036.0
10 TraesCS4A01G002200 chr4B 87.626 1188 101 19 2657 3825 590425897 590427057 0.000000e+00 1338.0
11 TraesCS4A01G002200 chr4B 87.622 307 18 9 4164 4451 590430012 590430317 5.710000e-89 339.0
12 TraesCS4A01G002200 chr4B 82.692 364 46 9 2331 2683 590425522 590425879 1.610000e-79 307.0
13 TraesCS4A01G002200 chr4B 80.711 197 26 9 2138 2332 590425173 590425359 4.800000e-30 143.0
14 TraesCS4A01G002200 chr4B 94.382 89 5 0 6 94 590140397 590140485 2.230000e-28 137.0
15 TraesCS4A01G002200 chr4B 88.462 52 5 1 90 141 590140494 590140544 1.380000e-05 62.1
16 TraesCS4A01G002200 chr1B 94.083 169 10 0 1875 2043 623731968 623732136 1.640000e-64 257.0
17 TraesCS4A01G002200 chr1B 85.377 212 27 4 1857 2065 41090990 41091200 2.790000e-52 217.0
18 TraesCS4A01G002200 chr1B 87.143 70 6 3 2015 2082 511444612 511444544 4.940000e-10 76.8
19 TraesCS4A01G002200 chr1A 100.000 129 0 0 1892 2020 588377235 588377363 5.960000e-59 239.0
20 TraesCS4A01G002200 chr1A 92.982 57 2 2 2015 2070 481924482 481924427 1.060000e-11 82.4
21 TraesCS4A01G002200 chr2B 90.217 184 14 4 1857 2037 211527829 211528011 2.140000e-58 237.0
22 TraesCS4A01G002200 chr7B 97.059 136 3 1 1892 2026 678632358 678632493 1.290000e-55 228.0
23 TraesCS4A01G002200 chr7B 94.643 56 3 0 2015 2070 327453198 327453143 2.280000e-13 87.9
24 TraesCS4A01G002200 chr7B 94.643 56 3 0 2015 2070 657660062 657660007 2.280000e-13 87.9
25 TraesCS4A01G002200 chr3D 89.560 182 14 5 1860 2037 610017761 610017581 4.640000e-55 226.0
26 TraesCS4A01G002200 chr3B 91.720 157 10 3 1886 2039 50421200 50421356 1.000000e-51 215.0
27 TraesCS4A01G002200 chr3B 88.372 172 16 4 1855 2024 422472135 422472304 2.170000e-48 204.0
28 TraesCS4A01G002200 chr7A 96.364 55 2 0 2015 2069 627610547 627610601 1.760000e-14 91.6
29 TraesCS4A01G002200 chr5A 94.643 56 3 0 2015 2070 533944222 533944277 2.280000e-13 87.9
30 TraesCS4A01G002200 chr6B 96.078 51 1 1 2015 2065 504000884 504000835 1.060000e-11 82.4
31 TraesCS4A01G002200 chr5B 87.879 66 5 1 2024 2089 364139470 364139408 1.780000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G002200 chr4A 1907784 1912389 4605 True 8506.0 8506 100.000000 1 4606 1 chr4A.!!$R1 4605
1 TraesCS4A01G002200 chr4D 469564258 469572683 8425 False 649.1 2259 89.783143 1 4451 7 chr4D.!!$F1 4450
2 TraesCS4A01G002200 chr4B 590423300 590430317 7017 False 832.6 2036 85.596800 224 4451 5 chr4B.!!$F2 4227

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
602 4071 0.373716 GACAGCAGCCGTAATTTCCG 59.626 55.0 0.0 0.0 0.0 4.30 F
1908 5411 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.0 0.0 0.0 0.0 3.28 F
2396 6230 0.035725 TCATGGTGCTCTGCCTGAAG 60.036 55.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2001 5504 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.0 0.00 0.00 0.00 4.12 R
2790 6696 0.251474 AGCAATGCCCAGCAGAAAGA 60.251 50.0 0.00 0.00 43.65 2.52 R
4177 11125 0.034896 AACCCAGTTGCTACGTCTGG 59.965 55.0 12.19 12.19 45.67 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.064582 CACGCTGCACATACGTACAA 58.935 50.000 0.00 0.00 38.09 2.41
45 46 2.858344 GCTGCACATACGTACAAGTAGG 59.142 50.000 0.00 0.00 34.88 3.18
68 69 0.675633 AATGCAAAAGCTGGCTCGTT 59.324 45.000 0.00 0.00 0.00 3.85
82 83 2.547218 GGCTCGTTTTGGAGTGTACTGA 60.547 50.000 0.00 0.00 36.41 3.41
120 134 1.604593 GCACAGTGCCCAGACCAAT 60.605 57.895 15.27 0.00 37.42 3.16
174 3638 9.435688 AAAATTTTGAAGCTTGAAGTTACTTGT 57.564 25.926 2.10 0.00 0.00 3.16
207 3671 7.036996 TGTTAAGTCTTTCATCAATGTGCAA 57.963 32.000 0.00 0.00 0.00 4.08
222 3686 6.643360 TCAATGTGCAAAAGTTTCATGATGAG 59.357 34.615 0.00 0.00 0.00 2.90
302 3770 5.064962 TGAAAGCATTTTGGAGCACTTTTTG 59.935 36.000 0.00 0.00 39.27 2.44
310 3778 2.165437 TGGAGCACTTTTTGGTTGTCAC 59.835 45.455 0.00 0.00 35.52 3.67
311 3779 2.165437 GGAGCACTTTTTGGTTGTCACA 59.835 45.455 0.00 0.00 35.52 3.58
328 3796 2.672874 TCACACGCATTCTATCAAGTGC 59.327 45.455 0.00 0.00 33.36 4.40
338 3806 6.966632 GCATTCTATCAAGTGCGTGAAAATAA 59.033 34.615 0.00 0.00 0.00 1.40
339 3807 7.164826 GCATTCTATCAAGTGCGTGAAAATAAG 59.835 37.037 0.00 0.00 0.00 1.73
370 3838 3.513662 AGTAAACGTGTTGCCAAAAACC 58.486 40.909 0.00 0.00 0.00 3.27
386 3854 9.190317 TGCCAAAAACCCAGTAATTTTTATTTT 57.810 25.926 0.00 0.00 36.18 1.82
419 3887 2.967599 TCGCTGTTCATATCAGTGCT 57.032 45.000 0.00 0.00 41.42 4.40
427 3895 6.092670 GCTGTTCATATCAGTGCTGTCTTTTA 59.907 38.462 0.00 0.00 35.60 1.52
484 3953 9.709495 ACAACATAAAACATAGTGAAATTGCAT 57.291 25.926 0.00 0.00 0.00 3.96
602 4071 0.373716 GACAGCAGCCGTAATTTCCG 59.626 55.000 0.00 0.00 0.00 4.30
604 4073 0.373716 CAGCAGCCGTAATTTCCGAC 59.626 55.000 0.00 0.00 0.00 4.79
607 4076 1.073177 CAGCCGTAATTTCCGACGTT 58.927 50.000 0.00 0.00 37.36 3.99
668 4137 6.850752 TTTTGGAGTGGAGGGAAATAATTC 57.149 37.500 0.00 0.00 34.66 2.17
682 4151 9.822727 AGGGAAATAATTCTTTTCAGGAGTTTA 57.177 29.630 13.02 0.00 35.29 2.01
781 4258 3.860536 GTGACGCAGATTACTTTCCTCTC 59.139 47.826 0.00 0.00 0.00 3.20
795 4272 3.388703 CTCTCTGCTCCTGGGCTGC 62.389 68.421 8.32 0.00 0.00 5.25
837 4314 3.552294 GCTCTCCTCGTTTTATTCCTTCG 59.448 47.826 0.00 0.00 0.00 3.79
898 4379 0.975040 CCTCCTCTCCACACCCAGAG 60.975 65.000 0.00 0.00 36.63 3.35
1017 4520 1.622607 CCATGGCTGAACCCGAGGTA 61.623 60.000 0.00 0.00 37.83 3.08
1092 4595 1.686110 GAAGAGGGAGCGGGAGGAA 60.686 63.158 0.00 0.00 0.00 3.36
1102 4605 2.039137 GGGAGGAAGGGGACGACT 59.961 66.667 0.00 0.00 0.00 4.18
1106 4609 3.459063 GGAAGGGGACGACTCCGG 61.459 72.222 0.00 0.00 42.51 5.14
1224 4727 2.941583 GAAGAGGGGGCCAAGGGT 60.942 66.667 4.39 0.00 0.00 4.34
1344 4847 2.035961 CCTCGAGTTCAACAAGGTGAGA 59.964 50.000 12.31 0.00 0.00 3.27
1346 4849 2.135933 CGAGTTCAACAAGGTGAGACC 58.864 52.381 0.00 0.00 38.99 3.85
1395 4898 2.759535 TGTGCCATGGTGATGTTATTGG 59.240 45.455 14.67 0.00 0.00 3.16
1443 4946 3.247442 TGAGTATTGCGTTTGTAGTCCG 58.753 45.455 0.00 0.00 0.00 4.79
1483 4986 4.884164 AGCTGGTAGGTTGATTTGATTAGC 59.116 41.667 0.00 0.00 0.00 3.09
1485 4988 5.220931 GCTGGTAGGTTGATTTGATTAGCTG 60.221 44.000 0.00 0.00 0.00 4.24
1615 5118 2.136298 TTGCAGTTGGTCAAGGTTGA 57.864 45.000 0.00 0.00 34.20 3.18
1643 5146 7.762615 CGAACTGGTTGTAAGTTGGATCTAATA 59.237 37.037 0.00 0.00 37.98 0.98
1655 5158 6.317140 AGTTGGATCTAATATTATGCCATGCG 59.683 38.462 10.23 0.00 0.00 4.73
1664 5167 1.408969 TATGCCATGCGTAGACCTCA 58.591 50.000 0.00 0.00 0.00 3.86
1684 5187 1.707427 ACAGCTTCCTGATTTGACCCT 59.293 47.619 0.00 0.00 41.77 4.34
1701 5204 4.285260 TGACCCTTTACCTGTTTAGAGGTC 59.715 45.833 1.31 0.00 43.33 3.85
1755 5258 9.543783 GTATCCTGAAATGTTAGTTTACTAGGG 57.456 37.037 0.00 0.00 0.00 3.53
1756 5259 7.563724 TCCTGAAATGTTAGTTTACTAGGGT 57.436 36.000 0.00 0.00 0.00 4.34
1757 5260 7.391620 TCCTGAAATGTTAGTTTACTAGGGTG 58.608 38.462 0.00 0.00 0.00 4.61
1758 5261 6.598064 CCTGAAATGTTAGTTTACTAGGGTGG 59.402 42.308 0.00 0.00 0.00 4.61
1837 5340 4.287067 AGCAAGGTTGATCTTCTACTTCCA 59.713 41.667 0.00 0.00 0.00 3.53
1843 5346 7.339482 AGGTTGATCTTCTACTTCCATTTACC 58.661 38.462 0.00 0.00 0.00 2.85
1864 5367 9.895138 TTTACCTGTGTTTATTATTACTCCCTC 57.105 33.333 0.00 0.00 0.00 4.30
1865 5368 6.896883 ACCTGTGTTTATTATTACTCCCTCC 58.103 40.000 0.00 0.00 0.00 4.30
1866 5369 5.989777 CCTGTGTTTATTATTACTCCCTCCG 59.010 44.000 0.00 0.00 0.00 4.63
1867 5370 5.362263 TGTGTTTATTATTACTCCCTCCGC 58.638 41.667 0.00 0.00 0.00 5.54
1868 5371 4.753610 GTGTTTATTATTACTCCCTCCGCC 59.246 45.833 0.00 0.00 0.00 6.13
1869 5372 4.202388 TGTTTATTATTACTCCCTCCGCCC 60.202 45.833 0.00 0.00 0.00 6.13
1870 5373 2.112279 ATTATTACTCCCTCCGCCCA 57.888 50.000 0.00 0.00 0.00 5.36
1871 5374 1.882308 TTATTACTCCCTCCGCCCAA 58.118 50.000 0.00 0.00 0.00 4.12
1873 5376 0.996583 ATTACTCCCTCCGCCCAAAA 59.003 50.000 0.00 0.00 0.00 2.44
1874 5377 0.772384 TTACTCCCTCCGCCCAAAAA 59.228 50.000 0.00 0.00 0.00 1.94
1895 5398 6.707599 AAAAGTGACGCAGATTTAGTACTC 57.292 37.500 0.00 0.00 0.00 2.59
1896 5399 4.373348 AGTGACGCAGATTTAGTACTCC 57.627 45.455 0.00 0.00 0.00 3.85
1897 5400 3.130693 AGTGACGCAGATTTAGTACTCCC 59.869 47.826 0.00 0.00 0.00 4.30
1898 5401 3.130693 GTGACGCAGATTTAGTACTCCCT 59.869 47.826 0.00 0.00 0.00 4.20
1899 5402 3.380637 TGACGCAGATTTAGTACTCCCTC 59.619 47.826 0.00 0.00 0.00 4.30
1900 5403 2.694109 ACGCAGATTTAGTACTCCCTCC 59.306 50.000 0.00 0.00 0.00 4.30
1901 5404 2.287668 CGCAGATTTAGTACTCCCTCCG 60.288 54.545 0.00 0.00 0.00 4.63
1902 5405 2.694109 GCAGATTTAGTACTCCCTCCGT 59.306 50.000 0.00 0.00 0.00 4.69
1903 5406 3.243468 GCAGATTTAGTACTCCCTCCGTC 60.243 52.174 0.00 0.00 0.00 4.79
1904 5407 3.318557 CAGATTTAGTACTCCCTCCGTCC 59.681 52.174 0.00 0.00 0.00 4.79
1905 5408 2.149973 TTTAGTACTCCCTCCGTCCC 57.850 55.000 0.00 0.00 0.00 4.46
1906 5409 1.002069 TTAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
1907 5410 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
1908 5411 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
1909 5412 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
1910 5413 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
1911 5414 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
1912 5415 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
1913 5416 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
1914 5417 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
1915 5418 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
1916 5419 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
1917 5420 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
1918 5421 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
1919 5422 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
1920 5423 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
1921 5424 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
1922 5425 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
1923 5426 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
1924 5427 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
1925 5428 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
1926 5429 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
1927 5430 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
1928 5431 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
1929 5432 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
1937 5440 8.622157 TCTTGTCTTAGATTTGTCTAGATACGG 58.378 37.037 0.00 0.00 0.00 4.02
1938 5441 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
1939 5442 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
1940 5443 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
1941 5444 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
1942 5445 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
2006 5509 9.898152 AACAAATTTAAGACAAGAATTTTGGGA 57.102 25.926 0.00 0.00 33.39 4.37
2007 5510 9.325198 ACAAATTTAAGACAAGAATTTTGGGAC 57.675 29.630 0.00 0.00 33.39 4.46
2008 5511 8.487176 CAAATTTAAGACAAGAATTTTGGGACG 58.513 33.333 0.00 0.00 32.35 4.79
2009 5512 5.699097 TTAAGACAAGAATTTTGGGACGG 57.301 39.130 0.00 0.00 0.00 4.79
2010 5513 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2011 5514 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2012 5515 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2013 5516 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2014 5517 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2015 5518 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
2016 5519 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
2017 5520 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
2018 5521 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
2019 5522 0.178926 TTTGGGACGGAGGGAGTACA 60.179 55.000 0.00 0.00 0.00 2.90
2020 5523 0.042131 TTGGGACGGAGGGAGTACAT 59.958 55.000 0.00 0.00 0.00 2.29
2021 5524 0.928505 TGGGACGGAGGGAGTACATA 59.071 55.000 0.00 0.00 0.00 2.29
2022 5525 1.133575 TGGGACGGAGGGAGTACATAG 60.134 57.143 0.00 0.00 0.00 2.23
2023 5526 1.133544 GGGACGGAGGGAGTACATAGT 60.134 57.143 0.00 0.00 0.00 2.12
2024 5527 2.664015 GGACGGAGGGAGTACATAGTT 58.336 52.381 0.00 0.00 0.00 2.24
2025 5528 3.435601 GGGACGGAGGGAGTACATAGTTA 60.436 52.174 0.00 0.00 0.00 2.24
2026 5529 3.819902 GGACGGAGGGAGTACATAGTTAG 59.180 52.174 0.00 0.00 0.00 2.34
2027 5530 4.459330 GACGGAGGGAGTACATAGTTAGT 58.541 47.826 0.00 0.00 0.00 2.24
2028 5531 5.455326 GGACGGAGGGAGTACATAGTTAGTA 60.455 48.000 0.00 0.00 0.00 1.82
2029 5532 5.372373 ACGGAGGGAGTACATAGTTAGTAC 58.628 45.833 0.00 0.00 41.59 2.73
2030 5533 5.104360 ACGGAGGGAGTACATAGTTAGTACA 60.104 44.000 6.30 0.00 43.24 2.90
2031 5534 5.824624 CGGAGGGAGTACATAGTTAGTACAA 59.175 44.000 6.30 0.00 43.24 2.41
2032 5535 6.319658 CGGAGGGAGTACATAGTTAGTACAAA 59.680 42.308 6.30 0.00 43.24 2.83
2033 5536 7.468357 CGGAGGGAGTACATAGTTAGTACAAAG 60.468 44.444 6.30 0.00 43.24 2.77
2034 5537 7.341512 GGAGGGAGTACATAGTTAGTACAAAGT 59.658 40.741 6.30 0.00 43.24 2.66
2035 5538 8.661752 AGGGAGTACATAGTTAGTACAAAGTT 57.338 34.615 6.30 0.00 43.24 2.66
2036 5539 8.529476 AGGGAGTACATAGTTAGTACAAAGTTG 58.471 37.037 6.30 0.00 43.24 3.16
2037 5540 8.309656 GGGAGTACATAGTTAGTACAAAGTTGT 58.690 37.037 1.75 1.75 43.24 3.32
2051 5554 6.224420 ACAAAGTTGTACTAAATCAGCGAC 57.776 37.500 0.00 0.00 40.16 5.19
2052 5555 5.756347 ACAAAGTTGTACTAAATCAGCGACA 59.244 36.000 0.00 0.00 40.16 4.35
2053 5556 5.840940 AAGTTGTACTAAATCAGCGACAC 57.159 39.130 0.00 0.00 0.00 3.67
2054 5557 5.135508 AGTTGTACTAAATCAGCGACACT 57.864 39.130 0.00 0.00 0.00 3.55
2055 5558 5.539048 AGTTGTACTAAATCAGCGACACTT 58.461 37.500 0.00 0.00 0.00 3.16
2056 5559 6.684686 AGTTGTACTAAATCAGCGACACTTA 58.315 36.000 0.00 0.00 0.00 2.24
2057 5560 7.321153 AGTTGTACTAAATCAGCGACACTTAT 58.679 34.615 0.00 0.00 0.00 1.73
2058 5561 7.817962 AGTTGTACTAAATCAGCGACACTTATT 59.182 33.333 0.00 0.00 0.00 1.40
2059 5562 8.440833 GTTGTACTAAATCAGCGACACTTATTT 58.559 33.333 0.00 0.00 36.43 1.40
2060 5563 8.542497 TGTACTAAATCAGCGACACTTATTTT 57.458 30.769 0.00 0.00 34.69 1.82
2061 5564 8.440059 TGTACTAAATCAGCGACACTTATTTTG 58.560 33.333 0.00 0.00 34.69 2.44
2062 5565 6.842163 ACTAAATCAGCGACACTTATTTTGG 58.158 36.000 0.00 0.00 34.69 3.28
2063 5566 4.701956 AATCAGCGACACTTATTTTGGG 57.298 40.909 0.00 0.00 0.00 4.12
2064 5567 3.410631 TCAGCGACACTTATTTTGGGA 57.589 42.857 0.00 0.00 0.00 4.37
2065 5568 3.334691 TCAGCGACACTTATTTTGGGAG 58.665 45.455 0.00 0.00 0.00 4.30
2066 5569 2.420022 CAGCGACACTTATTTTGGGAGG 59.580 50.000 0.00 0.00 0.00 4.30
2067 5570 1.743394 GCGACACTTATTTTGGGAGGG 59.257 52.381 0.00 0.00 0.00 4.30
2068 5571 2.617021 GCGACACTTATTTTGGGAGGGA 60.617 50.000 0.00 0.00 0.00 4.20
2069 5572 3.270877 CGACACTTATTTTGGGAGGGAG 58.729 50.000 0.00 0.00 0.00 4.30
2073 5576 3.758554 CACTTATTTTGGGAGGGAGTGTG 59.241 47.826 0.00 0.00 0.00 3.82
2086 5589 7.684186 TGGGAGGGAGTGTGAATTATCATATAT 59.316 37.037 0.00 0.00 38.01 0.86
2127 5632 8.239998 CCTGCTAATTAAGGTCTTCTTTCTTTG 58.760 37.037 0.00 0.00 36.93 2.77
2128 5633 8.918202 TGCTAATTAAGGTCTTCTTTCTTTGA 57.082 30.769 0.00 0.00 36.93 2.69
2132 5637 7.751768 ATTAAGGTCTTCTTTCTTTGACTGG 57.248 36.000 0.00 0.00 36.93 4.00
2133 5638 4.092116 AGGTCTTCTTTCTTTGACTGGG 57.908 45.455 0.00 0.00 0.00 4.45
2134 5639 3.459969 AGGTCTTCTTTCTTTGACTGGGT 59.540 43.478 0.00 0.00 0.00 4.51
2140 5645 5.323371 TCTTTCTTTGACTGGGTTGTTTG 57.677 39.130 0.00 0.00 0.00 2.93
2154 5659 4.322424 GGGTTGTTTGGGTTTCCATATGAC 60.322 45.833 3.65 0.00 43.63 3.06
2159 5664 6.520272 TGTTTGGGTTTCCATATGACTTTTG 58.480 36.000 3.65 0.00 43.63 2.44
2185 5690 4.608948 TCAGTGGTTTGTGGTTGTTTTT 57.391 36.364 0.00 0.00 0.00 1.94
2193 5698 4.471904 TTGTGGTTGTTTTTGGTGCATA 57.528 36.364 0.00 0.00 0.00 3.14
2194 5699 4.471904 TGTGGTTGTTTTTGGTGCATAA 57.528 36.364 0.00 0.00 0.00 1.90
2200 5705 5.582665 GGTTGTTTTTGGTGCATAAGTTGAA 59.417 36.000 0.00 0.00 0.00 2.69
2202 5707 7.439655 GGTTGTTTTTGGTGCATAAGTTGAATA 59.560 33.333 0.00 0.00 0.00 1.75
2203 5708 8.987890 GTTGTTTTTGGTGCATAAGTTGAATAT 58.012 29.630 0.00 0.00 0.00 1.28
2204 5709 9.553064 TTGTTTTTGGTGCATAAGTTGAATATT 57.447 25.926 0.00 0.00 0.00 1.28
2229 5734 2.674380 GGTGCTCTGCCCCAAGTG 60.674 66.667 0.00 0.00 0.00 3.16
2286 5792 5.412594 AGCGTTGATATCACAATCACAAGTT 59.587 36.000 4.48 0.00 35.63 2.66
2291 5797 8.671921 GTTGATATCACAATCACAAGTTGATCT 58.328 33.333 10.54 0.00 44.86 2.75
2306 5976 9.209175 ACAAGTTGATCTAGTCAAGACATTAAC 57.791 33.333 10.54 1.73 46.99 2.01
2312 5982 8.470805 TGATCTAGTCAAGACATTAACCTTCTC 58.529 37.037 2.72 0.00 36.93 2.87
2313 5983 8.602472 ATCTAGTCAAGACATTAACCTTCTCT 57.398 34.615 2.72 0.00 36.93 3.10
2332 6002 9.231297 CCTTCTCTTTCCATATGAGTTTTGTAA 57.769 33.333 3.65 0.00 31.64 2.41
2340 6174 9.952030 TTCCATATGAGTTTTGTAATGAGTGTA 57.048 29.630 3.65 0.00 0.00 2.90
2368 6202 4.813161 TGGTTGTTTTTGGTGCATATGTTG 59.187 37.500 4.29 0.00 0.00 3.33
2369 6203 5.053145 GGTTGTTTTTGGTGCATATGTTGA 58.947 37.500 4.29 0.00 0.00 3.18
2370 6204 5.700373 GGTTGTTTTTGGTGCATATGTTGAT 59.300 36.000 4.29 0.00 0.00 2.57
2371 6205 6.128580 GGTTGTTTTTGGTGCATATGTTGATC 60.129 38.462 4.29 0.00 0.00 2.92
2372 6206 6.343716 TGTTTTTGGTGCATATGTTGATCT 57.656 33.333 4.29 0.00 0.00 2.75
2373 6207 7.459795 TGTTTTTGGTGCATATGTTGATCTA 57.540 32.000 4.29 0.00 0.00 1.98
2396 6230 0.035725 TCATGGTGCTCTGCCTGAAG 60.036 55.000 0.00 0.00 0.00 3.02
2405 6239 3.260632 TGCTCTGCCTGAAGTGTATGTAA 59.739 43.478 0.00 0.00 0.00 2.41
2434 6268 7.451877 AGTTTGTCTCTAGAGTTCATGGTTAGA 59.548 37.037 19.21 1.85 0.00 2.10
2444 6278 8.546083 AGAGTTCATGGTTAGAGTTGATATCT 57.454 34.615 3.98 0.00 0.00 1.98
2453 6287 7.981789 TGGTTAGAGTTGATATCTCAATCACAC 59.018 37.037 3.98 1.45 43.08 3.82
2454 6288 8.200792 GGTTAGAGTTGATATCTCAATCACACT 58.799 37.037 3.98 0.00 43.08 3.55
2455 6289 9.593134 GTTAGAGTTGATATCTCAATCACACTT 57.407 33.333 3.98 0.00 43.08 3.16
2465 6299 6.214191 TCTCAATCACACTTAGATCCTGTC 57.786 41.667 0.00 0.00 0.00 3.51
2467 6301 6.211384 TCTCAATCACACTTAGATCCTGTCAA 59.789 38.462 0.00 0.00 0.00 3.18
2473 6307 5.579904 CACACTTAGATCCTGTCAAGACATG 59.420 44.000 3.01 1.25 41.01 3.21
2484 6318 6.016860 TCCTGTCAAGACATGAAAACTCATTG 60.017 38.462 0.00 0.00 40.50 2.82
2500 6334 5.640147 ACTCATTGGTTTTCTGGTTCCATA 58.360 37.500 0.00 0.00 0.00 2.74
2501 6335 5.476945 ACTCATTGGTTTTCTGGTTCCATAC 59.523 40.000 0.00 0.00 0.00 2.39
2505 6339 3.007635 GGTTTTCTGGTTCCATACGAGG 58.992 50.000 0.00 0.00 33.75 4.63
2527 6361 5.652452 AGGTTTGCTATTGGTTGGTTATCTC 59.348 40.000 0.00 0.00 0.00 2.75
2558 6392 2.659428 GTGCATCTTATTTGCCCTCCT 58.341 47.619 0.00 0.00 39.39 3.69
2560 6394 1.876156 GCATCTTATTTGCCCTCCTCG 59.124 52.381 0.00 0.00 33.95 4.63
2571 6417 0.036010 CCCTCCTCGCACAATGTTCT 60.036 55.000 0.00 0.00 0.00 3.01
2599 6445 8.514594 TGTTCTGCTCCAAAATATTTTAGTCAG 58.485 33.333 12.98 16.18 0.00 3.51
2629 6475 4.148128 AGTATTGCTGTCAATCAGGAGG 57.852 45.455 1.55 0.00 44.75 4.30
2630 6476 3.776969 AGTATTGCTGTCAATCAGGAGGA 59.223 43.478 1.55 0.00 44.75 3.71
2631 6477 3.947612 ATTGCTGTCAATCAGGAGGAT 57.052 42.857 0.00 0.00 44.75 3.24
2639 6485 6.685116 GCTGTCAATCAGGAGGATATATAGGC 60.685 46.154 0.00 0.00 43.78 3.93
2641 6487 5.663106 GTCAATCAGGAGGATATATAGGCCA 59.337 44.000 5.01 0.00 34.28 5.36
2648 6494 5.843421 AGGAGGATATATAGGCCATAAGCTG 59.157 44.000 5.01 0.00 43.05 4.24
2655 6501 1.538047 AGGCCATAAGCTGTGTTGTG 58.462 50.000 5.01 0.00 43.05 3.33
2660 6506 3.057315 GCCATAAGCTGTGTTGTGTTGAT 60.057 43.478 0.00 0.00 38.99 2.57
2667 6565 3.120060 GCTGTGTTGTGTTGATCTGATCC 60.120 47.826 14.71 1.44 0.00 3.36
2672 6570 2.981898 TGTGTTGATCTGATCCTGCAG 58.018 47.619 14.71 6.78 37.24 4.41
2686 6584 3.290710 TCCTGCAGATTAAGGATTTGGC 58.709 45.455 17.39 0.00 37.68 4.52
2700 6598 9.616156 TTAAGGATTTGGCGTTAATATTGACTA 57.384 29.630 8.55 0.00 0.00 2.59
2708 6606 8.951787 TGGCGTTAATATTGACTATGTAAAGT 57.048 30.769 8.55 0.00 0.00 2.66
2726 6624 7.589395 TGTAAAGTCATTGCGTGAATATTGTT 58.411 30.769 0.00 0.00 38.90 2.83
2730 6628 7.139896 AGTCATTGCGTGAATATTGTTAACA 57.860 32.000 3.59 3.59 38.90 2.41
2735 6633 6.751514 TGCGTGAATATTGTTAACATTCCT 57.248 33.333 9.56 0.00 0.00 3.36
2737 6635 7.247728 TGCGTGAATATTGTTAACATTCCTTC 58.752 34.615 9.56 12.23 0.00 3.46
2739 6637 7.627513 GCGTGAATATTGTTAACATTCCTTCCA 60.628 37.037 9.56 0.00 0.00 3.53
2750 6648 3.068590 ACATTCCTTCCAAGTTTGCAGTG 59.931 43.478 0.00 0.00 0.00 3.66
2751 6649 1.032014 TCCTTCCAAGTTTGCAGTGC 58.968 50.000 8.58 8.58 0.00 4.40
2757 6655 1.888512 CCAAGTTTGCAGTGCCTATGT 59.111 47.619 13.72 0.00 0.00 2.29
2764 6662 2.642427 TGCAGTGCCTATGTGGTTATG 58.358 47.619 13.72 0.00 38.35 1.90
2765 6663 1.334869 GCAGTGCCTATGTGGTTATGC 59.665 52.381 2.85 0.00 38.35 3.14
2766 6664 2.642427 CAGTGCCTATGTGGTTATGCA 58.358 47.619 0.00 0.00 38.35 3.96
2767 6665 3.016031 CAGTGCCTATGTGGTTATGCAA 58.984 45.455 0.00 0.00 38.35 4.08
2769 6667 4.821260 CAGTGCCTATGTGGTTATGCAATA 59.179 41.667 0.00 0.00 38.35 1.90
2770 6668 4.821805 AGTGCCTATGTGGTTATGCAATAC 59.178 41.667 0.00 0.00 38.35 1.89
2773 6671 4.216257 GCCTATGTGGTTATGCAATACTGG 59.784 45.833 0.00 0.00 38.35 4.00
2775 6673 5.702670 CCTATGTGGTTATGCAATACTGGAG 59.297 44.000 0.00 0.00 0.00 3.86
2776 6674 4.835284 TGTGGTTATGCAATACTGGAGA 57.165 40.909 0.00 0.00 0.00 3.71
2777 6675 4.769688 TGTGGTTATGCAATACTGGAGAG 58.230 43.478 0.00 0.00 0.00 3.20
2779 6677 4.572389 GTGGTTATGCAATACTGGAGAGTG 59.428 45.833 0.00 0.00 33.21 3.51
2790 6696 2.173569 ACTGGAGAGTGAACCTTTTGCT 59.826 45.455 0.00 0.00 0.00 3.91
2798 6704 3.067320 AGTGAACCTTTTGCTCTTTCTGC 59.933 43.478 0.00 0.00 0.00 4.26
2805 6711 0.251474 TTGCTCTTTCTGCTGGGCAT 60.251 50.000 0.00 0.00 38.13 4.40
2807 6713 0.172803 GCTCTTTCTGCTGGGCATTG 59.827 55.000 0.00 0.00 38.13 2.82
2822 6728 5.260424 TGGGCATTGCTAGACTTATGAAAA 58.740 37.500 8.82 0.00 0.00 2.29
2828 6735 5.530519 TGCTAGACTTATGAAAACTTGCG 57.469 39.130 0.00 0.00 33.61 4.85
2831 6738 4.749245 AGACTTATGAAAACTTGCGGTG 57.251 40.909 0.00 0.00 0.00 4.94
2846 6753 2.095466 TGCGGTGCTTTGCTATGTAAAC 60.095 45.455 0.00 0.00 0.00 2.01
2847 6754 2.161609 GCGGTGCTTTGCTATGTAAACT 59.838 45.455 0.00 0.00 0.00 2.66
2848 6755 3.365969 GCGGTGCTTTGCTATGTAAACTT 60.366 43.478 0.00 0.00 0.00 2.66
2850 6757 5.618195 GCGGTGCTTTGCTATGTAAACTTTA 60.618 40.000 0.00 0.00 0.00 1.85
2854 6761 9.285770 GGTGCTTTGCTATGTAAACTTTATTAC 57.714 33.333 0.00 0.00 36.52 1.89
2903 6810 9.559958 AATAAATTTGACTTGTCTTCTATTGCG 57.440 29.630 0.00 0.00 0.00 4.85
2918 6825 7.985184 TCTTCTATTGCGTTGGTGTAATCTTAT 59.015 33.333 0.00 0.00 0.00 1.73
2921 6828 9.602568 TCTATTGCGTTGGTGTAATCTTATTTA 57.397 29.630 0.00 0.00 0.00 1.40
2959 6866 0.041535 TGAATTGGCTGGCCCAGATT 59.958 50.000 16.85 5.28 46.39 2.40
2960 6867 0.462789 GAATTGGCTGGCCCAGATTG 59.537 55.000 16.85 0.00 46.39 2.67
2962 6869 0.974010 ATTGGCTGGCCCAGATTGTG 60.974 55.000 16.85 0.00 46.39 3.33
2963 6870 3.455469 GGCTGGCCCAGATTGTGC 61.455 66.667 16.85 0.00 32.44 4.57
2975 6882 4.763279 CCCAGATTGTGCTGCATATATTCA 59.237 41.667 5.27 0.00 34.56 2.57
3018 6928 6.561614 TGACGACTTCTTAGGATCATGTTAC 58.438 40.000 0.00 0.00 0.00 2.50
3032 6942 7.341256 AGGATCATGTTACTTGATGCTTTTGAT 59.659 33.333 22.64 6.73 46.26 2.57
3042 6952 3.056393 TGATGCTTTTGATTTGCCTCTGG 60.056 43.478 0.00 0.00 0.00 3.86
3047 6957 4.082026 GCTTTTGATTTGCCTCTGGTGTAT 60.082 41.667 0.00 0.00 0.00 2.29
3061 6971 4.018870 TCTGGTGTATTGTATGCCCTTCAA 60.019 41.667 0.00 0.00 0.00 2.69
3071 6981 5.811190 TGTATGCCCTTCAAGCTTTAGTTA 58.189 37.500 0.00 0.00 0.00 2.24
3156 7067 1.682854 TGCTTTTGAGTTGCCTCCAAG 59.317 47.619 0.00 0.00 36.86 3.61
3212 7123 6.683974 ATCCAGATGAAAGTTCGTTATTGG 57.316 37.500 6.26 6.26 0.00 3.16
3224 7135 4.794248 TCGTTATTGGCATCTTCATTCG 57.206 40.909 0.00 0.00 0.00 3.34
3228 7139 1.368641 TTGGCATCTTCATTCGGACG 58.631 50.000 0.00 0.00 0.00 4.79
3338 7251 0.911769 AGATTGGATCAGGCGTGGAA 59.088 50.000 6.56 0.00 0.00 3.53
3362 7275 1.773856 TTGAGATCCGCAACCACCCA 61.774 55.000 0.00 0.00 0.00 4.51
3398 7311 1.202879 TGTTTCTTCATCCGCAGGGTT 60.203 47.619 0.00 0.00 39.56 4.11
3473 7386 3.787001 CCCGAGGACCTGAAGGCC 61.787 72.222 0.00 0.00 39.32 5.19
3485 7398 1.285950 GAAGGCCGGCAACAAGAAC 59.714 57.895 30.85 8.01 0.00 3.01
3491 7404 1.000274 GCCGGCAACAAGAACTCAAAT 60.000 47.619 24.80 0.00 0.00 2.32
3511 7424 0.178990 GGCAAGAAGGGTCACCACTT 60.179 55.000 0.00 0.00 40.13 3.16
3512 7425 1.692411 GCAAGAAGGGTCACCACTTT 58.308 50.000 0.00 0.00 40.13 2.66
3516 7429 3.790089 AGAAGGGTCACCACTTTAAGG 57.210 47.619 0.00 0.00 40.13 2.69
3517 7430 2.375509 AGAAGGGTCACCACTTTAAGGG 59.624 50.000 0.00 0.00 40.13 3.95
3519 7432 0.111639 GGGTCACCACTTTAAGGGCA 59.888 55.000 0.00 0.00 36.50 5.36
3520 7433 1.479757 GGGTCACCACTTTAAGGGCAA 60.480 52.381 0.00 0.00 36.50 4.52
3613 7532 0.958876 CGGGGCAACTAGGAACCAAC 60.959 60.000 0.00 0.00 0.00 3.77
3633 7552 5.123661 CCAACAATATTCCCCACAATTTTGC 59.876 40.000 0.00 0.00 31.47 3.68
3634 7553 4.502962 ACAATATTCCCCACAATTTTGCG 58.497 39.130 0.00 0.00 31.47 4.85
3641 7560 0.531532 CCACAATTTTGCGTGCCCAA 60.532 50.000 0.00 0.00 0.00 4.12
3648 7567 2.985512 TTTGCGTGCCCAATGCCAAC 62.986 55.000 0.00 0.00 40.37 3.77
3657 7576 1.375013 CAATGCCAACCCTTGCAGC 60.375 57.895 0.00 0.00 41.46 5.25
3708 7631 1.066071 GTTTGCCTGTCCTAGAGACCC 60.066 57.143 8.36 0.42 45.68 4.46
3733 7657 8.198109 CCATTATCCACCTATATGTACTACTGC 58.802 40.741 0.00 0.00 0.00 4.40
3783 7707 2.721274 TTGCCATCATGTTGTTTCCG 57.279 45.000 3.19 0.00 0.00 4.30
3825 7750 0.320334 TCGAGCTTGGCGTGAATTGA 60.320 50.000 0.00 0.00 0.00 2.57
3826 7751 0.516877 CGAGCTTGGCGTGAATTGAA 59.483 50.000 0.00 0.00 0.00 2.69
3827 7752 1.464687 CGAGCTTGGCGTGAATTGAAG 60.465 52.381 0.00 0.00 0.00 3.02
3830 7863 1.666888 GCTTGGCGTGAATTGAAGGTG 60.667 52.381 0.00 0.00 0.00 4.00
3942 8457 2.356665 TGCTTTCTTGGCCACTTGTA 57.643 45.000 3.88 0.00 0.00 2.41
3969 8484 4.891992 ATTTATCCGGCTATGCACTAGT 57.108 40.909 0.00 0.00 0.00 2.57
3970 8485 3.660501 TTATCCGGCTATGCACTAGTG 57.339 47.619 18.93 18.93 0.00 2.74
4033 8937 2.832201 ACTAGGCTACGGGTCGGC 60.832 66.667 0.00 0.00 0.00 5.54
4068 8972 0.108945 GCTGTTGCTGGATTCTTGGC 60.109 55.000 0.00 0.00 36.03 4.52
4069 8973 0.169672 CTGTTGCTGGATTCTTGGCG 59.830 55.000 0.00 0.00 0.00 5.69
4084 9856 2.196245 GGCGGCTCCATGGGAATTC 61.196 63.158 13.02 0.00 34.01 2.17
4096 11006 1.512694 GGAATTCCGCAGCCTTTGG 59.487 57.895 9.17 0.00 0.00 3.28
4110 11020 1.335872 CCTTTGGCAACGGTGATTGTC 60.336 52.381 14.24 0.00 42.51 3.18
4120 11030 7.966484 GCAACGGTGATTGTCAGTGAAACTC 62.966 48.000 3.55 0.00 37.14 3.01
4177 11125 4.624452 GCCCGTGTAATATCCTATTCGAAC 59.376 45.833 0.00 0.00 0.00 3.95
4225 11174 0.389426 ACGTGCGTGCTTTAGGTAGG 60.389 55.000 0.00 0.00 0.00 3.18
4316 11278 3.561213 CCACATCGAGCTGCTGCG 61.561 66.667 7.01 10.95 45.42 5.18
4327 11289 0.179179 GCTGCTGCGATTGGTCTTTC 60.179 55.000 0.00 0.00 0.00 2.62
4407 11374 1.145759 TCGCTAGCAAAATCGCTCCG 61.146 55.000 16.45 0.00 42.62 4.63
4429 11396 1.798813 CAACCCAGTTTAGCTCGTCAC 59.201 52.381 0.00 0.00 0.00 3.67
4451 11418 3.297736 CCTCCCCGTGTTCTTAGATACT 58.702 50.000 0.00 0.00 0.00 2.12
4452 11419 3.068307 CCTCCCCGTGTTCTTAGATACTG 59.932 52.174 0.00 0.00 0.00 2.74
4453 11420 3.700038 CTCCCCGTGTTCTTAGATACTGT 59.300 47.826 0.00 0.00 0.00 3.55
4454 11421 3.446161 TCCCCGTGTTCTTAGATACTGTG 59.554 47.826 0.00 0.00 0.00 3.66
4455 11422 3.187700 CCCGTGTTCTTAGATACTGTGC 58.812 50.000 0.00 0.00 0.00 4.57
4456 11423 2.852413 CCGTGTTCTTAGATACTGTGCG 59.148 50.000 0.00 0.00 0.00 5.34
4457 11424 3.499048 CGTGTTCTTAGATACTGTGCGT 58.501 45.455 0.00 0.00 0.00 5.24
4458 11425 3.300853 CGTGTTCTTAGATACTGTGCGTG 59.699 47.826 0.00 0.00 0.00 5.34
4459 11426 3.612860 GTGTTCTTAGATACTGTGCGTGG 59.387 47.826 0.00 0.00 0.00 4.94
4460 11427 2.579207 TCTTAGATACTGTGCGTGGC 57.421 50.000 0.00 0.00 0.00 5.01
4461 11428 1.822371 TCTTAGATACTGTGCGTGGCA 59.178 47.619 0.00 0.00 35.60 4.92
4462 11429 2.232696 TCTTAGATACTGTGCGTGGCAA 59.767 45.455 0.00 0.00 41.47 4.52
4463 11430 2.293677 TAGATACTGTGCGTGGCAAG 57.706 50.000 0.00 0.00 41.47 4.01
4464 11431 0.391661 AGATACTGTGCGTGGCAAGG 60.392 55.000 1.91 0.00 41.47 3.61
4465 11432 1.369091 GATACTGTGCGTGGCAAGGG 61.369 60.000 1.91 0.00 41.47 3.95
4468 11435 3.899981 CTGTGCGTGGCAAGGGCTA 62.900 63.158 1.91 0.00 41.47 3.93
4469 11436 2.438434 GTGCGTGGCAAGGGCTAT 60.438 61.111 1.91 0.00 41.47 2.97
4470 11437 2.438254 TGCGTGGCAAGGGCTATG 60.438 61.111 1.91 0.00 40.21 2.23
4472 11439 2.124570 CGTGGCAAGGGCTATGCT 60.125 61.111 13.21 0.00 43.34 3.79
4473 11440 1.750399 CGTGGCAAGGGCTATGCTT 60.750 57.895 13.21 0.00 43.34 3.91
4474 11441 1.811860 GTGGCAAGGGCTATGCTTG 59.188 57.895 13.21 6.04 43.34 4.01
4475 11442 0.680921 GTGGCAAGGGCTATGCTTGA 60.681 55.000 13.21 0.00 43.34 3.02
4476 11443 0.680921 TGGCAAGGGCTATGCTTGAC 60.681 55.000 13.21 7.42 43.34 3.18
4477 11444 0.680921 GGCAAGGGCTATGCTTGACA 60.681 55.000 13.21 0.00 43.34 3.58
4478 11445 1.396653 GCAAGGGCTATGCTTGACAT 58.603 50.000 5.55 0.00 43.18 3.06
4479 11446 1.336125 GCAAGGGCTATGCTTGACATC 59.664 52.381 5.55 0.00 40.38 3.06
4480 11447 1.600957 CAAGGGCTATGCTTGACATCG 59.399 52.381 0.00 0.00 40.38 3.84
4481 11448 0.107456 AGGGCTATGCTTGACATCGG 59.893 55.000 0.00 0.00 40.38 4.18
4482 11449 0.886490 GGGCTATGCTTGACATCGGG 60.886 60.000 0.00 0.00 40.38 5.14
4483 11450 0.106708 GGCTATGCTTGACATCGGGA 59.893 55.000 0.00 0.00 40.38 5.14
4484 11451 1.475034 GGCTATGCTTGACATCGGGAA 60.475 52.381 0.00 0.00 40.38 3.97
4485 11452 1.599542 GCTATGCTTGACATCGGGAAC 59.400 52.381 0.00 0.00 40.38 3.62
4499 11466 2.640316 GGGAACGATAAGGGCATCTT 57.360 50.000 0.00 0.00 39.40 2.40
4500 11467 2.932261 GGGAACGATAAGGGCATCTTT 58.068 47.619 0.00 0.00 36.93 2.52
4501 11468 2.618709 GGGAACGATAAGGGCATCTTTG 59.381 50.000 0.00 0.00 36.93 2.77
4502 11469 3.541632 GGAACGATAAGGGCATCTTTGA 58.458 45.455 0.00 0.00 36.93 2.69
4503 11470 4.137543 GGAACGATAAGGGCATCTTTGAT 58.862 43.478 0.00 0.00 36.93 2.57
4504 11471 4.580580 GGAACGATAAGGGCATCTTTGATT 59.419 41.667 0.00 0.00 36.93 2.57
4505 11472 5.278022 GGAACGATAAGGGCATCTTTGATTC 60.278 44.000 0.00 0.00 36.93 2.52
4506 11473 4.780815 ACGATAAGGGCATCTTTGATTCA 58.219 39.130 0.00 0.00 36.93 2.57
4507 11474 5.192927 ACGATAAGGGCATCTTTGATTCAA 58.807 37.500 0.00 0.00 36.93 2.69
4508 11475 5.652014 ACGATAAGGGCATCTTTGATTCAAA 59.348 36.000 11.19 11.19 36.93 2.69
4521 11488 7.269477 CTTTGATTCAAAGGGCTTCTATAGG 57.731 40.000 25.14 2.45 44.75 2.57
4522 11489 6.575244 TTGATTCAAAGGGCTTCTATAGGA 57.425 37.500 0.00 0.00 0.00 2.94
4523 11490 6.770286 TGATTCAAAGGGCTTCTATAGGAT 57.230 37.500 0.00 0.00 0.00 3.24
4524 11491 7.154191 TGATTCAAAGGGCTTCTATAGGATT 57.846 36.000 0.00 0.00 0.00 3.01
4525 11492 7.586349 TGATTCAAAGGGCTTCTATAGGATTT 58.414 34.615 0.00 0.00 0.00 2.17
4526 11493 8.061304 TGATTCAAAGGGCTTCTATAGGATTTT 58.939 33.333 0.00 0.00 0.00 1.82
4527 11494 8.844865 ATTCAAAGGGCTTCTATAGGATTTTT 57.155 30.769 0.00 0.00 0.00 1.94
4528 11495 9.936329 ATTCAAAGGGCTTCTATAGGATTTTTA 57.064 29.630 0.00 0.00 0.00 1.52
4529 11496 9.762381 TTCAAAGGGCTTCTATAGGATTTTTAA 57.238 29.630 0.00 0.00 0.00 1.52
4530 11497 9.408648 TCAAAGGGCTTCTATAGGATTTTTAAG 57.591 33.333 0.00 0.00 0.00 1.85
4531 11498 8.633561 CAAAGGGCTTCTATAGGATTTTTAAGG 58.366 37.037 0.00 0.00 0.00 2.69
4532 11499 6.853490 AGGGCTTCTATAGGATTTTTAAGGG 58.147 40.000 0.00 0.00 0.00 3.95
4533 11500 6.624021 AGGGCTTCTATAGGATTTTTAAGGGA 59.376 38.462 0.00 0.00 0.00 4.20
4534 11501 7.298311 AGGGCTTCTATAGGATTTTTAAGGGAT 59.702 37.037 0.00 0.00 0.00 3.85
4535 11502 7.950684 GGGCTTCTATAGGATTTTTAAGGGATT 59.049 37.037 0.00 0.00 0.00 3.01
4536 11503 8.797438 GGCTTCTATAGGATTTTTAAGGGATTG 58.203 37.037 0.00 0.00 0.00 2.67
4537 11504 9.574516 GCTTCTATAGGATTTTTAAGGGATTGA 57.425 33.333 0.00 0.00 0.00 2.57
4565 11532 9.927081 ATCCTTATGAATTTTCTCTGTATTGGT 57.073 29.630 0.00 0.00 0.00 3.67
4566 11533 9.396022 TCCTTATGAATTTTCTCTGTATTGGTC 57.604 33.333 0.00 0.00 0.00 4.02
4567 11534 8.338259 CCTTATGAATTTTCTCTGTATTGGTCG 58.662 37.037 0.00 0.00 0.00 4.79
4568 11535 8.786826 TTATGAATTTTCTCTGTATTGGTCGT 57.213 30.769 0.00 0.00 0.00 4.34
4569 11536 7.687941 ATGAATTTTCTCTGTATTGGTCGTT 57.312 32.000 0.00 0.00 0.00 3.85
4570 11537 7.504924 TGAATTTTCTCTGTATTGGTCGTTT 57.495 32.000 0.00 0.00 0.00 3.60
4571 11538 8.610248 TGAATTTTCTCTGTATTGGTCGTTTA 57.390 30.769 0.00 0.00 0.00 2.01
4572 11539 9.058174 TGAATTTTCTCTGTATTGGTCGTTTAA 57.942 29.630 0.00 0.00 0.00 1.52
4576 11543 8.610248 TTTCTCTGTATTGGTCGTTTAATTCA 57.390 30.769 0.00 0.00 0.00 2.57
4577 11544 8.786826 TTCTCTGTATTGGTCGTTTAATTCAT 57.213 30.769 0.00 0.00 0.00 2.57
4578 11545 9.878667 TTCTCTGTATTGGTCGTTTAATTCATA 57.121 29.630 0.00 0.00 0.00 2.15
4579 11546 9.529325 TCTCTGTATTGGTCGTTTAATTCATAG 57.471 33.333 0.00 0.00 0.00 2.23
4580 11547 8.657074 TCTGTATTGGTCGTTTAATTCATAGG 57.343 34.615 0.00 0.00 0.00 2.57
4581 11548 8.479689 TCTGTATTGGTCGTTTAATTCATAGGA 58.520 33.333 0.00 0.00 0.00 2.94
4582 11549 9.104965 CTGTATTGGTCGTTTAATTCATAGGAA 57.895 33.333 0.00 0.00 37.45 3.36
4583 11550 9.621629 TGTATTGGTCGTTTAATTCATAGGAAT 57.378 29.630 0.00 0.00 45.57 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 0.030369 AGCGTGAAAGTCTCGAACGT 59.970 50.000 5.56 0.00 35.64 3.99
8 9 0.431233 CAGCGTGAAAGTCTCGAACG 59.569 55.000 4.08 0.00 35.64 3.95
18 19 1.722464 GTACGTATGTGCAGCGTGAAA 59.278 47.619 13.43 0.00 39.31 2.69
68 69 1.071699 GGGCTGTCAGTACACTCCAAA 59.928 52.381 0.93 0.00 0.00 3.28
207 3671 8.137437 ACGATTGTTTTCTCATCATGAAACTTT 58.863 29.630 0.00 0.00 33.77 2.66
222 3686 5.458452 TGCTCAAAACATCACGATTGTTTTC 59.542 36.000 18.09 11.71 41.85 2.29
302 3770 3.000041 TGATAGAATGCGTGTGACAACC 59.000 45.455 0.00 0.00 0.00 3.77
338 3806 6.201615 GGCAACACGTTTACTAGTTTTCTACT 59.798 38.462 0.00 0.00 41.04 2.57
339 3807 6.018832 TGGCAACACGTTTACTAGTTTTCTAC 60.019 38.462 0.00 0.00 46.17 2.59
370 3838 9.487790 TCTGAAGGCAAAAATAAAAATTACTGG 57.512 29.630 0.00 0.00 0.00 4.00
386 3854 2.229792 ACAGCGAAAATCTGAAGGCAA 58.770 42.857 0.00 0.00 35.61 4.52
401 3869 2.274437 ACAGCACTGATATGAACAGCG 58.726 47.619 4.31 0.00 38.74 5.18
402 3870 3.529533 AGACAGCACTGATATGAACAGC 58.470 45.455 4.31 0.00 38.74 4.40
437 3905 8.424918 TGTTGTGACAAATACAATTTTACCCAT 58.575 29.630 0.00 0.00 39.88 4.00
457 3925 8.976471 TGCAATTTCACTATGTTTTATGTTGTG 58.024 29.630 0.00 0.00 0.00 3.33
633 4102 9.025041 CCCTCCACTCCAAAATATATATTTTCC 57.975 37.037 24.32 0.00 42.26 3.13
682 4151 7.734942 TCAACCTCCTCAAAATTTGCTAAAAT 58.265 30.769 0.00 0.00 37.61 1.82
755 4224 3.368531 GGAAAGTAATCTGCGTCACTCCT 60.369 47.826 0.00 0.00 0.00 3.69
756 4225 2.930682 GGAAAGTAATCTGCGTCACTCC 59.069 50.000 0.00 0.00 0.00 3.85
760 4237 3.764434 AGAGAGGAAAGTAATCTGCGTCA 59.236 43.478 0.00 0.00 0.00 4.35
811 4288 3.606687 GAATAAAACGAGGAGAGCCCAA 58.393 45.455 0.00 0.00 37.41 4.12
837 4314 1.442017 GTTCGCACGGGAATGCAAC 60.442 57.895 0.00 0.00 46.47 4.17
898 4379 0.830444 GGGTTTTGGGGGTTCTGTCC 60.830 60.000 0.00 0.00 0.00 4.02
951 4453 2.073037 GAGATCGTAGCCGGGGACAC 62.073 65.000 2.18 0.00 33.95 3.67
993 4496 4.424711 GGTTCAGCCATGGCCGGA 62.425 66.667 33.14 26.66 43.17 5.14
996 4499 4.424711 TCGGGTTCAGCCATGGCC 62.425 66.667 33.14 17.44 43.17 5.36
1224 4727 2.203938 ACGGGCTTCCCTTCCTCA 60.204 61.111 0.00 0.00 42.67 3.86
1254 4757 3.423154 GCCGTGGCGAACTCCTTG 61.423 66.667 0.00 0.00 0.00 3.61
1335 4838 1.734477 CGCTGACGGTCTCACCTTG 60.734 63.158 9.88 0.00 35.66 3.61
1344 4847 0.892755 TGAATCCTAACGCTGACGGT 59.107 50.000 0.00 0.00 46.04 4.83
1352 4855 1.261619 GCGATTGGCTGAATCCTAACG 59.738 52.381 0.00 0.00 37.75 3.18
1395 4898 4.552166 AATCACAATATAGGCGCAACAC 57.448 40.909 10.83 0.00 0.00 3.32
1443 4946 0.669625 GCTTGTGACTACCGTGGACC 60.670 60.000 0.00 0.00 0.00 4.46
1483 4986 2.347490 CACCACGAACTCCCCCAG 59.653 66.667 0.00 0.00 0.00 4.45
1485 4988 4.717313 GGCACCACGAACTCCCCC 62.717 72.222 0.00 0.00 0.00 5.40
1571 5074 4.566545 TGTAACCTTCACAGTGCATTTG 57.433 40.909 0.00 0.00 0.00 2.32
1615 5118 3.876341 TCCAACTTACAACCAGTTCGTT 58.124 40.909 0.00 0.00 31.83 3.85
1643 5146 2.368548 TGAGGTCTACGCATGGCATAAT 59.631 45.455 0.00 0.00 0.00 1.28
1655 5158 2.171840 TCAGGAAGCTGTGAGGTCTAC 58.828 52.381 0.00 0.00 0.00 2.59
1664 5167 1.707427 AGGGTCAAATCAGGAAGCTGT 59.293 47.619 0.00 0.00 0.00 4.40
1720 5223 9.407380 ACTAACATTTCAGGATACATAATTGCA 57.593 29.630 0.00 0.00 41.41 4.08
1809 5312 8.499403 AAGTAGAAGATCAACCTTGCTTAATC 57.501 34.615 0.00 0.00 0.00 1.75
1843 5346 5.465724 GCGGAGGGAGTAATAATAAACACAG 59.534 44.000 0.00 0.00 0.00 3.66
1871 5374 6.147328 GGAGTACTAAATCTGCGTCACTTTTT 59.853 38.462 0.00 0.00 0.00 1.94
1873 5376 5.169295 GGAGTACTAAATCTGCGTCACTTT 58.831 41.667 0.00 0.00 0.00 2.66
1874 5377 4.381718 GGGAGTACTAAATCTGCGTCACTT 60.382 45.833 0.00 0.00 0.00 3.16
1876 5379 3.130693 AGGGAGTACTAAATCTGCGTCAC 59.869 47.826 0.00 0.00 0.00 3.67
1877 5380 3.362706 AGGGAGTACTAAATCTGCGTCA 58.637 45.455 0.00 0.00 0.00 4.35
1878 5381 3.243468 GGAGGGAGTACTAAATCTGCGTC 60.243 52.174 0.00 0.00 36.63 5.19
1879 5382 2.694109 GGAGGGAGTACTAAATCTGCGT 59.306 50.000 0.00 0.00 0.00 5.24
1880 5383 2.287668 CGGAGGGAGTACTAAATCTGCG 60.288 54.545 0.00 4.69 0.00 5.18
1881 5384 2.694109 ACGGAGGGAGTACTAAATCTGC 59.306 50.000 0.00 0.00 0.00 4.26
1882 5385 3.318557 GGACGGAGGGAGTACTAAATCTG 59.681 52.174 0.00 1.69 0.00 2.90
1883 5386 3.564264 GGACGGAGGGAGTACTAAATCT 58.436 50.000 0.00 0.00 0.00 2.40
1884 5387 2.627221 GGGACGGAGGGAGTACTAAATC 59.373 54.545 0.00 0.00 0.00 2.17
1885 5388 2.023695 TGGGACGGAGGGAGTACTAAAT 60.024 50.000 0.00 0.00 0.00 1.40
1886 5389 1.358787 TGGGACGGAGGGAGTACTAAA 59.641 52.381 0.00 0.00 0.00 1.85
1887 5390 1.002069 TGGGACGGAGGGAGTACTAA 58.998 55.000 0.00 0.00 0.00 2.24
1888 5391 1.002069 TTGGGACGGAGGGAGTACTA 58.998 55.000 0.00 0.00 0.00 1.82
1889 5392 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
1890 5393 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
1891 5394 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1892 5395 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
1893 5396 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
1894 5397 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
1895 5398 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
1896 5399 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
1897 5400 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
1898 5401 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
1899 5402 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
1900 5403 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
1901 5404 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
1902 5405 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
1903 5406 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
1911 5414 8.622157 CCGTATCTAGACAAATCTAAGACAAGA 58.378 37.037 0.00 0.00 36.98 3.02
1912 5415 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
1913 5416 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
1914 5417 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
1915 5418 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
1916 5419 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
1980 5483 9.898152 TCCCAAAATTCTTGTCTTAAATTTGTT 57.102 25.926 0.00 0.00 33.95 2.83
1981 5484 9.325198 GTCCCAAAATTCTTGTCTTAAATTTGT 57.675 29.630 0.00 0.00 33.95 2.83
1982 5485 8.487176 CGTCCCAAAATTCTTGTCTTAAATTTG 58.513 33.333 0.00 0.00 33.95 2.32
1983 5486 7.655732 CCGTCCCAAAATTCTTGTCTTAAATTT 59.344 33.333 0.00 0.00 34.86 1.82
1984 5487 7.014808 TCCGTCCCAAAATTCTTGTCTTAAATT 59.985 33.333 0.00 0.00 0.00 1.82
1985 5488 6.492087 TCCGTCCCAAAATTCTTGTCTTAAAT 59.508 34.615 0.00 0.00 0.00 1.40
1986 5489 5.828859 TCCGTCCCAAAATTCTTGTCTTAAA 59.171 36.000 0.00 0.00 0.00 1.52
1987 5490 5.378332 TCCGTCCCAAAATTCTTGTCTTAA 58.622 37.500 0.00 0.00 0.00 1.85
1988 5491 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
1989 5492 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
1990 5493 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
1991 5494 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
1992 5495 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
1993 5496 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
1994 5497 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
1995 5498 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
1996 5499 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
1997 5500 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
1998 5501 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
1999 5502 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
2000 5503 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
2001 5504 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
2002 5505 0.928505 TATGTACTCCCTCCGTCCCA 59.071 55.000 0.00 0.00 0.00 4.37
2003 5506 1.133544 ACTATGTACTCCCTCCGTCCC 60.134 57.143 0.00 0.00 0.00 4.46
2004 5507 2.361643 ACTATGTACTCCCTCCGTCC 57.638 55.000 0.00 0.00 0.00 4.79
2005 5508 4.459330 ACTAACTATGTACTCCCTCCGTC 58.541 47.826 0.00 0.00 0.00 4.79
2006 5509 4.516652 ACTAACTATGTACTCCCTCCGT 57.483 45.455 0.00 0.00 0.00 4.69
2007 5510 5.371526 TGTACTAACTATGTACTCCCTCCG 58.628 45.833 0.00 0.00 40.44 4.63
2008 5511 7.341512 ACTTTGTACTAACTATGTACTCCCTCC 59.658 40.741 0.00 0.00 40.44 4.30
2009 5512 8.291191 ACTTTGTACTAACTATGTACTCCCTC 57.709 38.462 0.00 0.00 40.44 4.30
2010 5513 8.529476 CAACTTTGTACTAACTATGTACTCCCT 58.471 37.037 0.00 0.00 40.44 4.20
2011 5514 8.309656 ACAACTTTGTACTAACTATGTACTCCC 58.690 37.037 0.00 0.00 40.16 4.30
2027 5530 6.924612 TGTCGCTGATTTAGTACAACTTTGTA 59.075 34.615 0.00 0.00 42.35 2.41
2028 5531 5.756347 TGTCGCTGATTTAGTACAACTTTGT 59.244 36.000 0.00 0.00 44.86 2.83
2029 5532 6.071463 GTGTCGCTGATTTAGTACAACTTTG 58.929 40.000 0.00 0.00 0.00 2.77
2030 5533 5.989777 AGTGTCGCTGATTTAGTACAACTTT 59.010 36.000 0.00 0.00 0.00 2.66
2031 5534 5.539048 AGTGTCGCTGATTTAGTACAACTT 58.461 37.500 0.00 0.00 0.00 2.66
2032 5535 5.135508 AGTGTCGCTGATTTAGTACAACT 57.864 39.130 0.00 0.00 0.00 3.16
2033 5536 5.840940 AAGTGTCGCTGATTTAGTACAAC 57.159 39.130 0.00 0.00 0.00 3.32
2034 5537 8.542497 AAATAAGTGTCGCTGATTTAGTACAA 57.458 30.769 6.91 0.00 36.68 2.41
2035 5538 8.440059 CAAAATAAGTGTCGCTGATTTAGTACA 58.560 33.333 8.84 0.00 37.29 2.90
2036 5539 7.903431 CCAAAATAAGTGTCGCTGATTTAGTAC 59.097 37.037 8.84 0.00 37.29 2.73
2037 5540 7.065324 CCCAAAATAAGTGTCGCTGATTTAGTA 59.935 37.037 8.84 0.00 37.29 1.82
2038 5541 6.128007 CCCAAAATAAGTGTCGCTGATTTAGT 60.128 38.462 8.84 0.00 37.29 2.24
2039 5542 6.093495 TCCCAAAATAAGTGTCGCTGATTTAG 59.907 38.462 8.84 4.74 37.29 1.85
2040 5543 5.941058 TCCCAAAATAAGTGTCGCTGATTTA 59.059 36.000 8.84 0.00 37.29 1.40
2041 5544 4.764823 TCCCAAAATAAGTGTCGCTGATTT 59.235 37.500 3.21 3.21 39.41 2.17
2042 5545 4.331968 TCCCAAAATAAGTGTCGCTGATT 58.668 39.130 0.00 0.00 29.37 2.57
2043 5546 3.941483 CTCCCAAAATAAGTGTCGCTGAT 59.059 43.478 0.00 0.00 0.00 2.90
2044 5547 3.334691 CTCCCAAAATAAGTGTCGCTGA 58.665 45.455 0.00 0.00 0.00 4.26
2045 5548 2.420022 CCTCCCAAAATAAGTGTCGCTG 59.580 50.000 0.00 0.00 0.00 5.18
2046 5549 2.618045 CCCTCCCAAAATAAGTGTCGCT 60.618 50.000 0.00 0.00 0.00 4.93
2047 5550 1.743394 CCCTCCCAAAATAAGTGTCGC 59.257 52.381 0.00 0.00 0.00 5.19
2048 5551 3.270877 CTCCCTCCCAAAATAAGTGTCG 58.729 50.000 0.00 0.00 0.00 4.35
2049 5552 4.010349 CACTCCCTCCCAAAATAAGTGTC 58.990 47.826 0.00 0.00 0.00 3.67
2050 5553 3.397955 ACACTCCCTCCCAAAATAAGTGT 59.602 43.478 0.00 0.00 40.58 3.55
2051 5554 3.758554 CACACTCCCTCCCAAAATAAGTG 59.241 47.826 0.00 0.00 38.80 3.16
2052 5555 3.655777 TCACACTCCCTCCCAAAATAAGT 59.344 43.478 0.00 0.00 0.00 2.24
2053 5556 4.301072 TCACACTCCCTCCCAAAATAAG 57.699 45.455 0.00 0.00 0.00 1.73
2054 5557 4.733077 TTCACACTCCCTCCCAAAATAA 57.267 40.909 0.00 0.00 0.00 1.40
2055 5558 4.946160 ATTCACACTCCCTCCCAAAATA 57.054 40.909 0.00 0.00 0.00 1.40
2056 5559 3.833559 ATTCACACTCCCTCCCAAAAT 57.166 42.857 0.00 0.00 0.00 1.82
2057 5560 3.611025 AATTCACACTCCCTCCCAAAA 57.389 42.857 0.00 0.00 0.00 2.44
2058 5561 4.290985 TGATAATTCACACTCCCTCCCAAA 59.709 41.667 0.00 0.00 0.00 3.28
2059 5562 3.849574 TGATAATTCACACTCCCTCCCAA 59.150 43.478 0.00 0.00 0.00 4.12
2060 5563 3.459828 TGATAATTCACACTCCCTCCCA 58.540 45.455 0.00 0.00 0.00 4.37
2061 5564 4.713792 ATGATAATTCACACTCCCTCCC 57.286 45.455 0.00 0.00 33.85 4.30
2113 5618 3.821748 ACCCAGTCAAAGAAAGAAGACC 58.178 45.455 0.00 0.00 0.00 3.85
2127 5632 1.411246 GGAAACCCAAACAACCCAGTC 59.589 52.381 0.00 0.00 0.00 3.51
2128 5633 1.273324 TGGAAACCCAAACAACCCAGT 60.273 47.619 0.00 0.00 0.00 4.00
2132 5637 4.526650 AGTCATATGGAAACCCAAACAACC 59.473 41.667 2.13 0.00 37.24 3.77
2133 5638 5.722021 AGTCATATGGAAACCCAAACAAC 57.278 39.130 2.13 0.00 37.24 3.32
2134 5639 6.739331 AAAGTCATATGGAAACCCAAACAA 57.261 33.333 2.13 0.00 37.24 2.83
2140 5645 5.975693 TGACAAAAGTCATATGGAAACCC 57.024 39.130 2.13 0.00 0.00 4.11
2154 5659 4.805192 CCACAAACCACTGAATGACAAAAG 59.195 41.667 0.00 0.00 0.00 2.27
2159 5664 3.130340 ACAACCACAAACCACTGAATGAC 59.870 43.478 0.00 0.00 0.00 3.06
2204 5709 0.968405 GGGCAGAGCACCATGAAAAA 59.032 50.000 0.00 0.00 0.00 1.94
2229 5734 7.113704 ACGCTAAAGACAAACTATTACACAC 57.886 36.000 0.00 0.00 0.00 3.82
2286 5792 8.367660 AGAAGGTTAATGTCTTGACTAGATCA 57.632 34.615 0.00 0.00 34.79 2.92
2291 5797 8.095169 GGAAAGAGAAGGTTAATGTCTTGACTA 58.905 37.037 2.35 0.00 0.00 2.59
2306 5976 7.693969 ACAAAACTCATATGGAAAGAGAAGG 57.306 36.000 2.13 0.00 33.69 3.46
2312 5982 9.778993 CACTCATTACAAAACTCATATGGAAAG 57.221 33.333 2.13 0.00 0.00 2.62
2313 5983 9.295825 ACACTCATTACAAAACTCATATGGAAA 57.704 29.630 2.13 0.00 0.00 3.13
2332 6002 7.232534 ACCAAAAACAACCACATATACACTCAT 59.767 33.333 0.00 0.00 0.00 2.90
2340 6174 4.679373 TGCACCAAAAACAACCACATAT 57.321 36.364 0.00 0.00 0.00 1.78
2368 6202 4.023365 GGCAGAGCACCATGAAAATAGATC 60.023 45.833 0.00 0.00 0.00 2.75
2369 6203 3.887716 GGCAGAGCACCATGAAAATAGAT 59.112 43.478 0.00 0.00 0.00 1.98
2370 6204 3.054139 AGGCAGAGCACCATGAAAATAGA 60.054 43.478 0.00 0.00 0.00 1.98
2371 6205 3.066342 CAGGCAGAGCACCATGAAAATAG 59.934 47.826 0.00 0.00 0.00 1.73
2372 6206 3.018856 CAGGCAGAGCACCATGAAAATA 58.981 45.455 0.00 0.00 0.00 1.40
2373 6207 1.822990 CAGGCAGAGCACCATGAAAAT 59.177 47.619 0.00 0.00 0.00 1.82
2405 6239 8.140112 ACCATGAACTCTAGAGACAAACTATT 57.860 34.615 26.57 7.20 0.00 1.73
2417 6251 9.906660 GATATCAACTCTAACCATGAACTCTAG 57.093 37.037 0.00 0.00 0.00 2.43
2421 6255 8.311395 TGAGATATCAACTCTAACCATGAACT 57.689 34.615 5.32 0.00 35.66 3.01
2434 6268 9.979578 GATCTAAGTGTGATTGAGATATCAACT 57.020 33.333 4.61 0.00 36.37 3.16
2444 6278 6.211384 TCTTGACAGGATCTAAGTGTGATTGA 59.789 38.462 0.00 0.00 0.00 2.57
2453 6287 7.605691 AGTTTTCATGTCTTGACAGGATCTAAG 59.394 37.037 16.94 0.00 32.84 2.18
2454 6288 7.453393 AGTTTTCATGTCTTGACAGGATCTAA 58.547 34.615 16.94 7.67 32.84 2.10
2455 6289 7.009179 AGTTTTCATGTCTTGACAGGATCTA 57.991 36.000 16.94 2.24 32.84 1.98
2465 6299 7.775397 AAAACCAATGAGTTTTCATGTCTTG 57.225 32.000 6.72 0.00 44.59 3.02
2484 6318 3.007635 CCTCGTATGGAACCAGAAAACC 58.992 50.000 0.00 0.00 0.00 3.27
2492 6326 2.109425 AGCAAACCTCGTATGGAACC 57.891 50.000 0.00 0.00 0.00 3.62
2500 6334 2.159382 CCAACCAATAGCAAACCTCGT 58.841 47.619 0.00 0.00 0.00 4.18
2501 6335 2.159382 ACCAACCAATAGCAAACCTCG 58.841 47.619 0.00 0.00 0.00 4.63
2505 6339 6.759497 AGAGATAACCAACCAATAGCAAAC 57.241 37.500 0.00 0.00 0.00 2.93
2535 6369 0.385390 GGGCAAATAAGATGCACCGG 59.615 55.000 0.00 0.00 45.60 5.28
2571 6417 8.177119 ACTAAAATATTTTGGAGCAGAACACA 57.823 30.769 25.66 2.04 33.49 3.72
2599 6445 9.282247 CTGATTGACAGCAATACTAAATTCAAC 57.718 33.333 0.00 0.00 44.47 3.18
2629 6475 7.065085 CACAACACAGCTTATGGCCTATATATC 59.935 40.741 3.32 0.00 43.05 1.63
2630 6476 6.881065 CACAACACAGCTTATGGCCTATATAT 59.119 38.462 3.32 0.00 43.05 0.86
2631 6477 6.183361 ACACAACACAGCTTATGGCCTATATA 60.183 38.462 3.32 0.00 43.05 0.86
2639 6485 4.456911 AGATCAACACAACACAGCTTATGG 59.543 41.667 0.00 0.00 0.00 2.74
2641 6487 5.308014 TCAGATCAACACAACACAGCTTAT 58.692 37.500 0.00 0.00 0.00 1.73
2648 6494 3.120060 GCAGGATCAGATCAACACAACAC 60.120 47.826 12.66 0.00 0.00 3.32
2667 6565 2.684881 ACGCCAAATCCTTAATCTGCAG 59.315 45.455 7.63 7.63 0.00 4.41
2672 6570 9.394477 GTCAATATTAACGCCAAATCCTTAATC 57.606 33.333 0.00 0.00 0.00 1.75
2700 6598 7.761409 ACAATATTCACGCAATGACTTTACAT 58.239 30.769 0.00 0.00 36.92 2.29
2707 6605 7.969387 ATGTTAACAATATTCACGCAATGAC 57.031 32.000 13.23 0.00 36.92 3.06
2708 6606 7.700234 GGAATGTTAACAATATTCACGCAATGA 59.300 33.333 13.23 0.00 39.79 2.57
2712 6610 6.751514 AGGAATGTTAACAATATTCACGCA 57.248 33.333 13.23 0.00 39.79 5.24
2714 6612 7.757526 TGGAAGGAATGTTAACAATATTCACG 58.242 34.615 13.23 0.00 39.79 4.35
2726 6624 4.892934 ACTGCAAACTTGGAAGGAATGTTA 59.107 37.500 0.00 0.00 0.00 2.41
2730 6628 2.036346 GCACTGCAAACTTGGAAGGAAT 59.964 45.455 0.00 0.00 0.00 3.01
2735 6633 2.356665 TAGGCACTGCAAACTTGGAA 57.643 45.000 2.82 0.00 41.52 3.53
2737 6635 1.888512 ACATAGGCACTGCAAACTTGG 59.111 47.619 2.82 0.00 41.52 3.61
2739 6637 1.888512 CCACATAGGCACTGCAAACTT 59.111 47.619 2.82 0.00 41.52 2.66
2750 6648 4.216257 CCAGTATTGCATAACCACATAGGC 59.784 45.833 0.00 0.00 43.14 3.93
2751 6649 5.620206 TCCAGTATTGCATAACCACATAGG 58.380 41.667 0.00 0.00 45.67 2.57
2757 6655 4.469586 TCACTCTCCAGTATTGCATAACCA 59.530 41.667 0.00 0.00 0.00 3.67
2764 6662 3.618690 AGGTTCACTCTCCAGTATTGC 57.381 47.619 0.00 0.00 0.00 3.56
2765 6663 5.335191 GCAAAAGGTTCACTCTCCAGTATTG 60.335 44.000 0.00 0.00 0.00 1.90
2766 6664 4.762251 GCAAAAGGTTCACTCTCCAGTATT 59.238 41.667 0.00 0.00 0.00 1.89
2767 6665 4.042187 AGCAAAAGGTTCACTCTCCAGTAT 59.958 41.667 0.00 0.00 0.00 2.12
2769 6667 2.173569 AGCAAAAGGTTCACTCTCCAGT 59.826 45.455 0.00 0.00 0.00 4.00
2770 6668 2.810852 GAGCAAAAGGTTCACTCTCCAG 59.189 50.000 0.00 0.00 0.00 3.86
2773 6671 4.819088 AGAAAGAGCAAAAGGTTCACTCTC 59.181 41.667 0.00 0.00 36.72 3.20
2775 6673 4.791088 GCAGAAAGAGCAAAAGGTTCACTC 60.791 45.833 0.00 0.00 0.00 3.51
2776 6674 3.067320 GCAGAAAGAGCAAAAGGTTCACT 59.933 43.478 0.00 0.00 0.00 3.41
2777 6675 3.067320 AGCAGAAAGAGCAAAAGGTTCAC 59.933 43.478 0.00 0.00 0.00 3.18
2779 6677 3.551659 CCAGCAGAAAGAGCAAAAGGTTC 60.552 47.826 0.00 0.00 0.00 3.62
2790 6696 0.251474 AGCAATGCCCAGCAGAAAGA 60.251 50.000 0.00 0.00 43.65 2.52
2798 6704 4.077300 TCATAAGTCTAGCAATGCCCAG 57.923 45.455 0.00 0.00 0.00 4.45
2805 6711 5.106712 CCGCAAGTTTTCATAAGTCTAGCAA 60.107 40.000 0.00 0.00 0.00 3.91
2807 6713 4.392138 ACCGCAAGTTTTCATAAGTCTAGC 59.608 41.667 0.00 0.00 0.00 3.42
2822 6728 0.523072 CATAGCAAAGCACCGCAAGT 59.477 50.000 0.00 0.00 0.00 3.16
2828 6735 9.285770 GTAATAAAGTTTACATAGCAAAGCACC 57.714 33.333 0.00 0.00 33.25 5.01
2831 6738 9.010366 GCTGTAATAAAGTTTACATAGCAAAGC 57.990 33.333 16.54 7.86 40.34 3.51
2880 6787 6.970484 ACGCAATAGAAGACAAGTCAAATTT 58.030 32.000 2.72 0.00 0.00 1.82
2885 6792 3.745975 CCAACGCAATAGAAGACAAGTCA 59.254 43.478 2.72 0.00 0.00 3.41
2886 6793 3.746492 ACCAACGCAATAGAAGACAAGTC 59.254 43.478 0.00 0.00 0.00 3.01
2889 6796 3.472652 ACACCAACGCAATAGAAGACAA 58.527 40.909 0.00 0.00 0.00 3.18
2890 6797 3.120321 ACACCAACGCAATAGAAGACA 57.880 42.857 0.00 0.00 0.00 3.41
2891 6798 5.581085 AGATTACACCAACGCAATAGAAGAC 59.419 40.000 0.00 0.00 0.00 3.01
2992 6902 5.411781 ACATGATCCTAAGAAGTCGTCAAC 58.588 41.667 0.00 0.00 0.00 3.18
2998 6908 9.039870 CATCAAGTAACATGATCCTAAGAAGTC 57.960 37.037 0.00 0.00 35.38 3.01
3001 6911 7.568349 AGCATCAAGTAACATGATCCTAAGAA 58.432 34.615 0.00 0.00 35.38 2.52
3003 6913 7.798596 AAGCATCAAGTAACATGATCCTAAG 57.201 36.000 0.00 0.00 35.38 2.18
3018 6928 4.625742 CAGAGGCAAATCAAAAGCATCAAG 59.374 41.667 0.00 0.00 41.11 3.02
3032 6942 3.694072 GCATACAATACACCAGAGGCAAA 59.306 43.478 0.00 0.00 0.00 3.68
3042 6952 3.947834 AGCTTGAAGGGCATACAATACAC 59.052 43.478 0.00 0.00 0.00 2.90
3047 6957 4.662278 ACTAAAGCTTGAAGGGCATACAA 58.338 39.130 0.00 0.00 0.00 2.41
3071 6981 9.807649 GCAATAACAAACTTTCATCTGGATAAT 57.192 29.630 0.00 0.00 0.00 1.28
3156 7067 2.092914 AGCTTGAAGGGCATACAGTACC 60.093 50.000 0.00 0.00 0.00 3.34
3212 7123 0.302890 CTGCGTCCGAATGAAGATGC 59.697 55.000 0.00 0.00 43.81 3.91
3228 7139 6.763610 AGGTAATATTCAAGTTAGCACTCTGC 59.236 38.462 0.00 0.00 45.46 4.26
3312 7225 1.680207 GCCTGATCCAATCTTCTTGGC 59.320 52.381 0.00 0.00 39.38 4.52
3338 7251 0.678048 GGTTGCGGATCTCAAAGGCT 60.678 55.000 0.00 0.00 0.00 4.58
3398 7311 1.695114 AATCATCGGCGGACCCATCA 61.695 55.000 7.21 0.00 0.00 3.07
3473 7386 2.664916 CCATTTGAGTTCTTGTTGCCG 58.335 47.619 0.00 0.00 0.00 5.69
3485 7398 2.229784 GTGACCCTTCTTGCCATTTGAG 59.770 50.000 0.00 0.00 0.00 3.02
3491 7404 1.150536 GTGGTGACCCTTCTTGCCA 59.849 57.895 0.00 0.00 0.00 4.92
3511 7424 1.602323 CTGCCACCGTTGCCCTTAA 60.602 57.895 0.00 0.00 0.00 1.85
3512 7425 2.033448 CTGCCACCGTTGCCCTTA 59.967 61.111 0.00 0.00 0.00 2.69
3516 7429 4.329545 TCCTCTGCCACCGTTGCC 62.330 66.667 0.00 0.00 0.00 4.52
3517 7430 2.743928 CTCCTCTGCCACCGTTGC 60.744 66.667 0.00 0.00 0.00 4.17
3519 7432 2.203788 TCCTCCTCTGCCACCGTT 60.204 61.111 0.00 0.00 0.00 4.44
3520 7433 2.681778 CTCCTCCTCTGCCACCGT 60.682 66.667 0.00 0.00 0.00 4.83
3527 7440 2.124693 GCCTCGTCCTCCTCCTCTG 61.125 68.421 0.00 0.00 0.00 3.35
3613 7532 4.329528 CACGCAAAATTGTGGGGAATATTG 59.670 41.667 16.36 1.62 42.72 1.90
3641 7560 2.118951 AGCTGCAAGGGTTGGCAT 59.881 55.556 1.02 0.00 39.65 4.40
3648 7567 1.255667 AAATGCCTCAGCTGCAAGGG 61.256 55.000 20.06 14.53 42.92 3.95
3657 7576 5.163744 GCATAGCTCATGATAAATGCCTCAG 60.164 44.000 18.55 3.33 36.69 3.35
3708 7631 7.915923 CGCAGTAGTACATATAGGTGGATAATG 59.084 40.741 2.52 1.74 0.00 1.90
3733 7657 5.180367 AGGATCATCATATATCAGTCGCG 57.820 43.478 0.00 0.00 0.00 5.87
3783 7707 6.508088 CGAGTGATAACCGAATAACAGAAAGC 60.508 42.308 0.00 0.00 0.00 3.51
3942 8457 3.054434 TGCATAGCCGGATAAATATGCCT 60.054 43.478 19.51 0.00 46.34 4.75
3969 8484 1.040646 AGACAAACGGAGAGACAGCA 58.959 50.000 0.00 0.00 0.00 4.41
3970 8485 1.423395 CAGACAAACGGAGAGACAGC 58.577 55.000 0.00 0.00 0.00 4.40
3971 8486 1.000283 AGCAGACAAACGGAGAGACAG 60.000 52.381 0.00 0.00 0.00 3.51
3972 8487 1.040646 AGCAGACAAACGGAGAGACA 58.959 50.000 0.00 0.00 0.00 3.41
3973 8488 1.000163 TCAGCAGACAAACGGAGAGAC 60.000 52.381 0.00 0.00 0.00 3.36
3974 8489 1.328279 TCAGCAGACAAACGGAGAGA 58.672 50.000 0.00 0.00 0.00 3.10
3977 8497 2.666619 GCAATTCAGCAGACAAACGGAG 60.667 50.000 0.00 0.00 0.00 4.63
4033 8937 3.818787 GCAGTGCCAGCCATTCGG 61.819 66.667 2.85 0.00 0.00 4.30
4050 8954 0.169672 CGCCAAGAATCCAGCAACAG 59.830 55.000 0.00 0.00 0.00 3.16
4068 8972 1.893808 CGGAATTCCCATGGAGCCG 60.894 63.158 19.01 14.09 36.79 5.52
4069 8973 2.196245 GCGGAATTCCCATGGAGCC 61.196 63.158 19.01 5.80 31.21 4.70
4096 11006 1.225855 TCACTGACAATCACCGTTGC 58.774 50.000 0.00 0.00 32.32 4.17
4110 11020 0.870393 ATGCGCACAGAGTTTCACTG 59.130 50.000 14.90 0.00 40.68 3.66
4120 11030 3.982475 TCTTCTTCCTATATGCGCACAG 58.018 45.455 14.90 10.62 0.00 3.66
4177 11125 0.034896 AACCCAGTTGCTACGTCTGG 59.965 55.000 12.19 12.19 45.67 3.86
4235 11193 3.418913 CCGTTCGTGCGCATCCAA 61.419 61.111 15.91 3.63 0.00 3.53
4363 11329 4.394712 ACGCTTCCAAGGCTCCGG 62.395 66.667 0.00 0.00 0.00 5.14
4394 11361 1.801512 GTTGCCGGAGCGATTTTGC 60.802 57.895 5.05 0.00 44.31 3.68
4407 11374 0.605589 ACGAGCTAAACTGGGTTGCC 60.606 55.000 0.00 0.00 0.00 4.52
4417 11384 1.262640 GGGGAGGGTGACGAGCTAAA 61.263 60.000 0.00 0.00 0.00 1.85
4429 11396 1.497161 ATCTAAGAACACGGGGAGGG 58.503 55.000 0.00 0.00 0.00 4.30
4451 11418 3.266686 ATAGCCCTTGCCACGCACA 62.267 57.895 0.00 0.00 38.71 4.57
4452 11419 2.438434 ATAGCCCTTGCCACGCAC 60.438 61.111 0.00 0.00 38.71 5.34
4453 11420 2.438254 CATAGCCCTTGCCACGCA 60.438 61.111 0.00 0.00 38.69 5.24
4454 11421 3.892581 GCATAGCCCTTGCCACGC 61.893 66.667 0.00 0.00 38.69 5.34
4455 11422 1.750399 AAGCATAGCCCTTGCCACG 60.750 57.895 0.00 0.00 41.06 4.94
4456 11423 0.680921 TCAAGCATAGCCCTTGCCAC 60.681 55.000 0.00 0.00 41.06 5.01
4457 11424 0.680921 GTCAAGCATAGCCCTTGCCA 60.681 55.000 0.00 0.00 41.06 4.92
4458 11425 0.680921 TGTCAAGCATAGCCCTTGCC 60.681 55.000 0.00 0.00 41.06 4.52
4459 11426 1.336125 GATGTCAAGCATAGCCCTTGC 59.664 52.381 0.00 0.00 39.54 4.01
4460 11427 1.600957 CGATGTCAAGCATAGCCCTTG 59.399 52.381 0.00 0.00 40.72 3.61
4461 11428 1.475751 CCGATGTCAAGCATAGCCCTT 60.476 52.381 0.00 0.00 38.06 3.95
4462 11429 0.107456 CCGATGTCAAGCATAGCCCT 59.893 55.000 0.00 0.00 38.06 5.19
4463 11430 0.886490 CCCGATGTCAAGCATAGCCC 60.886 60.000 0.00 0.00 38.06 5.19
4464 11431 0.106708 TCCCGATGTCAAGCATAGCC 59.893 55.000 0.00 0.00 38.06 3.93
4465 11432 1.599542 GTTCCCGATGTCAAGCATAGC 59.400 52.381 0.00 0.00 38.06 2.97
4466 11433 1.860950 CGTTCCCGATGTCAAGCATAG 59.139 52.381 0.00 0.00 38.06 2.23
4467 11434 1.478916 TCGTTCCCGATGTCAAGCATA 59.521 47.619 0.00 0.00 38.40 3.14
4468 11435 0.249120 TCGTTCCCGATGTCAAGCAT 59.751 50.000 0.00 0.00 38.40 3.79
4469 11436 1.668867 TCGTTCCCGATGTCAAGCA 59.331 52.632 0.00 0.00 38.40 3.91
4470 11437 4.590487 TCGTTCCCGATGTCAAGC 57.410 55.556 0.00 0.00 38.40 4.01
4478 11445 5.012944 AAAGATGCCCTTATCGTTCCCGA 62.013 47.826 0.00 0.00 40.02 5.14
4479 11446 0.393077 AGATGCCCTTATCGTTCCCG 59.607 55.000 0.00 0.00 32.33 5.14
4480 11447 2.618709 CAAAGATGCCCTTATCGTTCCC 59.381 50.000 0.00 0.00 34.00 3.97
4481 11448 3.541632 TCAAAGATGCCCTTATCGTTCC 58.458 45.455 0.00 0.00 34.00 3.62
4482 11449 5.296780 TGAATCAAAGATGCCCTTATCGTTC 59.703 40.000 0.00 0.00 34.00 3.95
4483 11450 5.192927 TGAATCAAAGATGCCCTTATCGTT 58.807 37.500 0.00 0.00 34.00 3.85
4484 11451 4.780815 TGAATCAAAGATGCCCTTATCGT 58.219 39.130 0.00 0.00 34.00 3.73
4485 11452 5.756195 TTGAATCAAAGATGCCCTTATCG 57.244 39.130 0.00 0.00 34.00 2.92
4498 11465 6.969043 TCCTATAGAAGCCCTTTGAATCAAA 58.031 36.000 8.25 8.25 0.00 2.69
4499 11466 6.575244 TCCTATAGAAGCCCTTTGAATCAA 57.425 37.500 0.00 0.00 0.00 2.57
4500 11467 6.770286 ATCCTATAGAAGCCCTTTGAATCA 57.230 37.500 0.00 0.00 0.00 2.57
4501 11468 8.470657 AAAATCCTATAGAAGCCCTTTGAATC 57.529 34.615 0.00 0.00 0.00 2.52
4502 11469 8.844865 AAAAATCCTATAGAAGCCCTTTGAAT 57.155 30.769 0.00 0.00 0.00 2.57
4503 11470 9.762381 TTAAAAATCCTATAGAAGCCCTTTGAA 57.238 29.630 0.00 0.00 0.00 2.69
4504 11471 9.408648 CTTAAAAATCCTATAGAAGCCCTTTGA 57.591 33.333 0.00 0.00 0.00 2.69
4505 11472 8.633561 CCTTAAAAATCCTATAGAAGCCCTTTG 58.366 37.037 0.00 0.00 0.00 2.77
4506 11473 7.785028 CCCTTAAAAATCCTATAGAAGCCCTTT 59.215 37.037 0.00 0.00 0.00 3.11
4507 11474 7.130442 TCCCTTAAAAATCCTATAGAAGCCCTT 59.870 37.037 0.00 0.00 0.00 3.95
4508 11475 6.624021 TCCCTTAAAAATCCTATAGAAGCCCT 59.376 38.462 0.00 0.00 0.00 5.19
4509 11476 6.849151 TCCCTTAAAAATCCTATAGAAGCCC 58.151 40.000 0.00 0.00 0.00 5.19
4510 11477 8.797438 CAATCCCTTAAAAATCCTATAGAAGCC 58.203 37.037 0.00 0.00 0.00 4.35
4511 11478 9.574516 TCAATCCCTTAAAAATCCTATAGAAGC 57.425 33.333 0.00 0.00 0.00 3.86
4539 11506 9.927081 ACCAATACAGAGAAAATTCATAAGGAT 57.073 29.630 0.00 0.00 0.00 3.24
4540 11507 9.396022 GACCAATACAGAGAAAATTCATAAGGA 57.604 33.333 0.00 0.00 0.00 3.36
4541 11508 8.338259 CGACCAATACAGAGAAAATTCATAAGG 58.662 37.037 0.00 0.00 0.00 2.69
4542 11509 8.883731 ACGACCAATACAGAGAAAATTCATAAG 58.116 33.333 0.00 0.00 0.00 1.73
4543 11510 8.786826 ACGACCAATACAGAGAAAATTCATAA 57.213 30.769 0.00 0.00 0.00 1.90
4544 11511 8.786826 AACGACCAATACAGAGAAAATTCATA 57.213 30.769 0.00 0.00 0.00 2.15
4545 11512 7.687941 AACGACCAATACAGAGAAAATTCAT 57.312 32.000 0.00 0.00 0.00 2.57
4546 11513 7.504924 AAACGACCAATACAGAGAAAATTCA 57.495 32.000 0.00 0.00 0.00 2.57
4550 11517 9.058174 TGAATTAAACGACCAATACAGAGAAAA 57.942 29.630 0.00 0.00 0.00 2.29
4551 11518 8.610248 TGAATTAAACGACCAATACAGAGAAA 57.390 30.769 0.00 0.00 0.00 2.52
4552 11519 8.786826 ATGAATTAAACGACCAATACAGAGAA 57.213 30.769 0.00 0.00 0.00 2.87
4553 11520 9.529325 CTATGAATTAAACGACCAATACAGAGA 57.471 33.333 0.00 0.00 0.00 3.10
4554 11521 8.765219 CCTATGAATTAAACGACCAATACAGAG 58.235 37.037 0.00 0.00 0.00 3.35
4555 11522 8.479689 TCCTATGAATTAAACGACCAATACAGA 58.520 33.333 0.00 0.00 0.00 3.41
4556 11523 8.657074 TCCTATGAATTAAACGACCAATACAG 57.343 34.615 0.00 0.00 0.00 2.74
4557 11524 9.621629 ATTCCTATGAATTAAACGACCAATACA 57.378 29.630 0.00 0.00 38.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.