Multiple sequence alignment - TraesCS3D01G537800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G537800 chr3D 100.000 3955 0 0 1 3955 610807086 610803132 0.000000e+00 7304.0
1 TraesCS3D01G537800 chr3B 89.716 2499 158 44 812 3270 828422272 828419833 0.000000e+00 3099.0
2 TraesCS3D01G537800 chr3B 89.280 2500 165 45 812 3270 828763079 828765516 0.000000e+00 3037.0
3 TraesCS3D01G537800 chr3A 90.099 1313 97 18 1968 3270 745513616 745512327 0.000000e+00 1674.0
4 TraesCS3D01G537800 chr3A 87.239 1199 82 30 816 1973 745518238 745517070 0.000000e+00 1301.0
5 TraesCS3D01G537800 chr3A 83.333 120 9 6 9 128 745519026 745518918 2.510000e-17 100.0
6 TraesCS3D01G537800 chr3A 94.340 53 3 0 125 177 745518654 745518602 9.110000e-12 82.4
7 TraesCS3D01G537800 chr6D 96.802 688 20 1 3270 3955 6421200 6421887 0.000000e+00 1147.0
8 TraesCS3D01G537800 chr6D 76.747 916 177 29 2042 2941 453651426 453650531 2.760000e-131 479.0
9 TraesCS3D01G537800 chr6A 96.361 687 20 3 3271 3955 24186529 24185846 0.000000e+00 1125.0
10 TraesCS3D01G537800 chr6A 77.212 904 172 28 2054 2942 599830946 599830062 7.630000e-137 497.0
11 TraesCS3D01G537800 chr6A 79.008 262 55 0 1656 1917 599831379 599831118 3.140000e-41 180.0
12 TraesCS3D01G537800 chr5B 96.221 688 23 2 3270 3955 677829911 677830597 0.000000e+00 1123.0
13 TraesCS3D01G537800 chr5B 95.936 689 22 4 3271 3955 558416259 558415573 0.000000e+00 1112.0
14 TraesCS3D01G537800 chr5B 95.809 692 20 5 3270 3955 558411095 558410407 0.000000e+00 1109.0
15 TraesCS3D01G537800 chr2B 95.965 694 19 3 3270 3955 798700944 798701636 0.000000e+00 1118.0
16 TraesCS3D01G537800 chr2B 95.803 691 24 4 3267 3955 790875710 790875023 0.000000e+00 1110.0
17 TraesCS3D01G537800 chr2B 95.815 693 20 3 3271 3955 798687001 798687692 0.000000e+00 1110.0
18 TraesCS3D01G537800 chr6B 96.070 687 24 2 3271 3955 132122631 132123316 0.000000e+00 1116.0
19 TraesCS3D01G537800 chr6B 77.273 902 172 28 2054 2941 688470555 688471437 2.120000e-137 499.0
20 TraesCS3D01G537800 chr1A 84.101 912 122 14 2051 2954 534051258 534050362 0.000000e+00 859.0
21 TraesCS3D01G537800 chr1A 81.915 282 45 5 1656 1933 534051801 534051522 2.380000e-57 233.0
22 TraesCS3D01G537800 chr1D 83.680 913 131 11 2051 2957 437000496 436999596 0.000000e+00 845.0
23 TraesCS3D01G537800 chr1B 83.571 913 131 13 2051 2957 592172843 592171944 0.000000e+00 837.0
24 TraesCS3D01G537800 chr1B 79.393 791 144 13 1139 1917 592173960 592173177 1.250000e-149 540.0
25 TraesCS3D01G537800 chr2D 75.362 897 197 20 2054 2936 174324532 174325418 1.020000e-110 411.0
26 TraesCS3D01G537800 chr2A 75.971 824 179 15 2054 2864 174245678 174246495 1.320000e-109 407.0
27 TraesCS3D01G537800 chr2A 74.944 898 200 22 2054 2936 174027294 174028181 4.790000e-104 388.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G537800 chr3D 610803132 610807086 3954 True 7304.00 7304 100.00000 1 3955 1 chr3D.!!$R1 3954
1 TraesCS3D01G537800 chr3B 828419833 828422272 2439 True 3099.00 3099 89.71600 812 3270 1 chr3B.!!$R1 2458
2 TraesCS3D01G537800 chr3B 828763079 828765516 2437 False 3037.00 3037 89.28000 812 3270 1 chr3B.!!$F1 2458
3 TraesCS3D01G537800 chr3A 745512327 745519026 6699 True 789.35 1674 88.75275 9 3270 4 chr3A.!!$R1 3261
4 TraesCS3D01G537800 chr6D 6421200 6421887 687 False 1147.00 1147 96.80200 3270 3955 1 chr6D.!!$F1 685
5 TraesCS3D01G537800 chr6D 453650531 453651426 895 True 479.00 479 76.74700 2042 2941 1 chr6D.!!$R1 899
6 TraesCS3D01G537800 chr6A 24185846 24186529 683 True 1125.00 1125 96.36100 3271 3955 1 chr6A.!!$R1 684
7 TraesCS3D01G537800 chr6A 599830062 599831379 1317 True 338.50 497 78.11000 1656 2942 2 chr6A.!!$R2 1286
8 TraesCS3D01G537800 chr5B 677829911 677830597 686 False 1123.00 1123 96.22100 3270 3955 1 chr5B.!!$F1 685
9 TraesCS3D01G537800 chr5B 558415573 558416259 686 True 1112.00 1112 95.93600 3271 3955 1 chr5B.!!$R2 684
10 TraesCS3D01G537800 chr5B 558410407 558411095 688 True 1109.00 1109 95.80900 3270 3955 1 chr5B.!!$R1 685
11 TraesCS3D01G537800 chr2B 798700944 798701636 692 False 1118.00 1118 95.96500 3270 3955 1 chr2B.!!$F2 685
12 TraesCS3D01G537800 chr2B 790875023 790875710 687 True 1110.00 1110 95.80300 3267 3955 1 chr2B.!!$R1 688
13 TraesCS3D01G537800 chr2B 798687001 798687692 691 False 1110.00 1110 95.81500 3271 3955 1 chr2B.!!$F1 684
14 TraesCS3D01G537800 chr6B 132122631 132123316 685 False 1116.00 1116 96.07000 3271 3955 1 chr6B.!!$F1 684
15 TraesCS3D01G537800 chr6B 688470555 688471437 882 False 499.00 499 77.27300 2054 2941 1 chr6B.!!$F2 887
16 TraesCS3D01G537800 chr1A 534050362 534051801 1439 True 546.00 859 83.00800 1656 2954 2 chr1A.!!$R1 1298
17 TraesCS3D01G537800 chr1D 436999596 437000496 900 True 845.00 845 83.68000 2051 2957 1 chr1D.!!$R1 906
18 TraesCS3D01G537800 chr1B 592171944 592173960 2016 True 688.50 837 81.48200 1139 2957 2 chr1B.!!$R1 1818
19 TraesCS3D01G537800 chr2D 174324532 174325418 886 False 411.00 411 75.36200 2054 2936 1 chr2D.!!$F1 882
20 TraesCS3D01G537800 chr2A 174245678 174246495 817 False 407.00 407 75.97100 2054 2864 1 chr2A.!!$F2 810
21 TraesCS3D01G537800 chr2A 174027294 174028181 887 False 388.00 388 74.94400 2054 2936 1 chr2A.!!$F1 882

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
50 51 0.036022 TTGACATGCCACCATCGTCA 59.964 50.0 0.00 0.0 37.53 4.35 F
486 800 0.107017 AAGTGCAGGACAAGCAGTGT 60.107 50.0 0.00 0.0 44.40 3.55 F
632 946 0.249826 TGCTGCAGACACACGAATCA 60.250 50.0 20.43 0.0 0.00 2.57 F
1625 1991 0.028110 GCGCCTCTTTTTGATAGCCG 59.972 55.0 0.00 0.0 0.00 5.52 F
2613 6755 0.038709 GGAGATTGAGATCGGAGGCG 60.039 60.0 0.00 0.0 37.37 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1069 1421 0.108424 GGTAGTGCTGCTGGACTCAG 60.108 60.0 20.61 0.00 43.84 3.35 R
1624 1990 0.248054 GTCACACACTTGCCACAACG 60.248 55.0 0.00 0.00 0.00 4.10 R
2624 6766 1.019278 TCTCGAAAATCACGCCAGGC 61.019 55.0 0.00 0.00 0.00 4.85 R
2879 7021 0.108089 TTACGGTATGTGGCGCATGT 60.108 50.0 23.12 14.64 38.47 3.21 R
3909 8066 0.798776 CAACATCCACGAGAGGCAAC 59.201 55.0 0.00 0.00 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.133003 TCAGCTACATCTTACCAGGAAGC 59.867 47.826 0.00 0.00 0.00 3.86
47 48 2.945447 AATTTGACATGCCACCATCG 57.055 45.000 0.00 0.00 0.00 3.84
50 51 0.036022 TTGACATGCCACCATCGTCA 59.964 50.000 0.00 0.00 37.53 4.35
59 60 4.580868 TGCCACCATCGTCAGTTAATAAA 58.419 39.130 0.00 0.00 0.00 1.40
60 61 5.189928 TGCCACCATCGTCAGTTAATAAAT 58.810 37.500 0.00 0.00 0.00 1.40
61 62 5.650266 TGCCACCATCGTCAGTTAATAAATT 59.350 36.000 0.00 0.00 0.00 1.82
62 63 6.824196 TGCCACCATCGTCAGTTAATAAATTA 59.176 34.615 0.00 0.00 0.00 1.40
63 64 7.500892 TGCCACCATCGTCAGTTAATAAATTAT 59.499 33.333 0.00 0.00 0.00 1.28
64 65 7.803189 GCCACCATCGTCAGTTAATAAATTATG 59.197 37.037 0.00 0.00 0.00 1.90
65 66 9.051679 CCACCATCGTCAGTTAATAAATTATGA 57.948 33.333 0.00 0.00 0.00 2.15
103 104 3.380637 AGCAGCATGATCTTGACCATTTC 59.619 43.478 12.54 0.00 39.69 2.17
108 109 5.533903 AGCATGATCTTGACCATTTCATACC 59.466 40.000 12.54 0.00 32.84 2.73
109 110 5.300034 GCATGATCTTGACCATTTCATACCA 59.700 40.000 12.54 0.00 32.84 3.25
120 121 5.222130 ACCATTTCATACCAACTCAGGTTCT 60.222 40.000 0.00 0.00 43.08 3.01
121 122 5.124457 CCATTTCATACCAACTCAGGTTCTG 59.876 44.000 0.00 0.00 43.08 3.02
128 129 5.319043 ACCAACTCAGGTTCTGGAAATAA 57.681 39.130 0.00 0.00 39.34 1.40
129 130 5.892348 ACCAACTCAGGTTCTGGAAATAAT 58.108 37.500 0.00 0.00 39.34 1.28
130 131 5.946377 ACCAACTCAGGTTCTGGAAATAATC 59.054 40.000 0.00 0.00 39.34 1.75
131 132 6.183347 CCAACTCAGGTTCTGGAAATAATCT 58.817 40.000 0.00 0.00 32.73 2.40
133 134 6.627087 ACTCAGGTTCTGGAAATAATCTCA 57.373 37.500 0.00 0.00 31.51 3.27
135 136 6.441924 ACTCAGGTTCTGGAAATAATCTCAGA 59.558 38.462 0.00 0.00 35.13 3.27
136 137 7.038017 ACTCAGGTTCTGGAAATAATCTCAGAA 60.038 37.037 0.00 0.00 40.22 3.02
177 445 9.830186 AGACCAGTTTACTGATACCTCATATAT 57.170 33.333 11.35 0.00 46.59 0.86
201 469 1.095600 TAGAGCTGAGTGGTGCTACG 58.904 55.000 0.00 0.00 39.91 3.51
209 477 3.994392 CTGAGTGGTGCTACGTTGTTAAT 59.006 43.478 0.00 0.00 0.00 1.40
214 482 4.390603 GTGGTGCTACGTTGTTAATCATCA 59.609 41.667 0.00 0.00 0.00 3.07
216 484 5.121611 TGGTGCTACGTTGTTAATCATCAAG 59.878 40.000 0.00 0.00 0.00 3.02
218 486 6.311935 GGTGCTACGTTGTTAATCATCAAGTA 59.688 38.462 0.00 0.00 0.00 2.24
219 487 7.011109 GGTGCTACGTTGTTAATCATCAAGTAT 59.989 37.037 0.00 0.00 0.00 2.12
220 488 8.388103 GTGCTACGTTGTTAATCATCAAGTATT 58.612 33.333 0.00 0.00 0.00 1.89
221 489 8.600625 TGCTACGTTGTTAATCATCAAGTATTC 58.399 33.333 0.00 0.00 0.00 1.75
222 490 8.818057 GCTACGTTGTTAATCATCAAGTATTCT 58.182 33.333 0.00 0.00 0.00 2.40
224 492 8.771920 ACGTTGTTAATCATCAAGTATTCTGA 57.228 30.769 0.00 0.00 0.00 3.27
225 493 9.214957 ACGTTGTTAATCATCAAGTATTCTGAA 57.785 29.630 0.00 0.00 0.00 3.02
241 555 3.198068 TCTGAAGTCGCCATATTTGAGC 58.802 45.455 0.00 0.00 0.00 4.26
248 562 2.639751 CGCCATATTTGAGCGTTTAGC 58.360 47.619 9.61 0.00 44.65 3.09
267 581 7.604164 CGTTTAGCAGACATCTCCCATAATATT 59.396 37.037 0.00 0.00 0.00 1.28
269 583 5.251764 AGCAGACATCTCCCATAATATTGC 58.748 41.667 0.00 0.00 0.00 3.56
271 585 5.240891 CAGACATCTCCCATAATATTGCGT 58.759 41.667 0.00 0.00 0.00 5.24
274 588 4.997395 ACATCTCCCATAATATTGCGTCAC 59.003 41.667 0.00 0.00 0.00 3.67
276 590 2.736721 CTCCCATAATATTGCGTCACGG 59.263 50.000 0.00 0.00 0.00 4.94
281 595 4.621460 CCATAATATTGCGTCACGGAGTAG 59.379 45.833 0.00 0.00 41.61 2.57
284 598 0.456221 ATTGCGTCACGGAGTAGAGG 59.544 55.000 0.00 0.00 41.61 3.69
290 604 2.657143 GTCACGGAGTAGAGGATCCTT 58.343 52.381 17.42 8.62 41.61 3.36
300 614 4.653341 AGTAGAGGATCCTTGAGAACATGG 59.347 45.833 17.42 0.00 41.06 3.66
301 615 3.458831 AGAGGATCCTTGAGAACATGGT 58.541 45.455 17.42 0.00 40.69 3.55
310 624 4.818546 CCTTGAGAACATGGTGATGGATAC 59.181 45.833 0.00 0.00 36.82 2.24
314 628 3.706594 AGAACATGGTGATGGATACGACT 59.293 43.478 0.00 0.00 42.51 4.18
330 644 2.111043 CTGTCCACACAAGGCGGT 59.889 61.111 0.00 0.00 29.82 5.68
332 646 0.949105 CTGTCCACACAAGGCGGTAC 60.949 60.000 0.00 0.00 29.82 3.34
333 647 1.070105 GTCCACACAAGGCGGTACA 59.930 57.895 0.00 0.00 0.00 2.90
334 648 0.949105 GTCCACACAAGGCGGTACAG 60.949 60.000 0.00 0.00 0.00 2.74
350 664 2.225068 ACAGGACCTTCATAATCGCG 57.775 50.000 0.00 0.00 0.00 5.87
351 665 0.861837 CAGGACCTTCATAATCGCGC 59.138 55.000 0.00 0.00 0.00 6.86
353 667 1.201825 GACCTTCATAATCGCGCGC 59.798 57.895 27.95 23.91 0.00 6.86
354 668 2.159272 GACCTTCATAATCGCGCGCC 62.159 60.000 27.95 8.11 0.00 6.53
356 670 2.583868 TTCATAATCGCGCGCCGT 60.584 55.556 27.95 14.98 38.35 5.68
358 672 2.354763 TTCATAATCGCGCGCCGTTG 62.355 55.000 27.95 19.34 38.35 4.10
361 675 3.975083 TAATCGCGCGCCGTTGTCT 62.975 57.895 27.95 5.60 38.35 3.41
363 677 3.975083 ATCGCGCGCCGTTGTCTTA 62.975 57.895 27.95 3.42 38.35 2.10
364 678 4.191485 CGCGCGCCGTTGTCTTAG 62.191 66.667 27.72 2.72 0.00 2.18
365 679 2.807895 GCGCGCCGTTGTCTTAGA 60.808 61.111 23.24 0.00 0.00 2.10
366 680 2.789203 GCGCGCCGTTGTCTTAGAG 61.789 63.158 23.24 0.00 0.00 2.43
367 681 2.158959 CGCGCCGTTGTCTTAGAGG 61.159 63.158 0.00 0.00 0.00 3.69
368 682 1.080025 GCGCCGTTGTCTTAGAGGT 60.080 57.895 0.00 0.00 0.00 3.85
369 683 0.171903 GCGCCGTTGTCTTAGAGGTA 59.828 55.000 0.00 0.00 0.00 3.08
370 684 1.403249 GCGCCGTTGTCTTAGAGGTAA 60.403 52.381 0.00 0.00 0.00 2.85
371 685 2.927871 GCGCCGTTGTCTTAGAGGTAAA 60.928 50.000 0.00 0.00 0.00 2.01
372 686 2.665052 CGCCGTTGTCTTAGAGGTAAAC 59.335 50.000 0.00 0.00 0.00 2.01
373 687 2.998670 GCCGTTGTCTTAGAGGTAAACC 59.001 50.000 0.00 0.00 0.00 3.27
375 689 4.634199 CCGTTGTCTTAGAGGTAAACCAA 58.366 43.478 1.26 0.00 38.89 3.67
377 691 4.450080 CGTTGTCTTAGAGGTAAACCAACC 59.550 45.833 1.26 0.00 40.06 3.77
378 692 4.261578 TGTCTTAGAGGTAAACCAACCG 57.738 45.455 1.26 0.00 44.77 4.44
379 693 3.007182 TGTCTTAGAGGTAAACCAACCGG 59.993 47.826 0.00 0.00 44.77 5.28
390 704 2.396590 ACCAACCGGTATAGCACAAG 57.603 50.000 8.00 0.00 46.71 3.16
391 705 1.065709 ACCAACCGGTATAGCACAAGG 60.066 52.381 8.00 1.45 46.71 3.61
392 706 1.065709 CCAACCGGTATAGCACAAGGT 60.066 52.381 8.00 0.00 40.22 3.50
393 707 2.006888 CAACCGGTATAGCACAAGGTG 58.993 52.381 8.00 0.00 38.98 4.00
394 708 0.539986 ACCGGTATAGCACAAGGTGG 59.460 55.000 4.49 0.00 38.01 4.61
395 709 0.539986 CCGGTATAGCACAAGGTGGT 59.460 55.000 6.31 6.31 46.27 4.16
397 711 1.480954 CGGTATAGCACAAGGTGGTCT 59.519 52.381 4.14 0.00 43.42 3.85
399 713 2.158943 GGTATAGCACAAGGTGGTCTCC 60.159 54.545 4.14 3.24 43.42 3.71
400 714 1.656587 ATAGCACAAGGTGGTCTCCA 58.343 50.000 4.14 0.00 43.42 3.86
402 716 0.326264 AGCACAAGGTGGTCTCCATC 59.674 55.000 0.00 0.00 40.38 3.51
404 718 0.692476 CACAAGGTGGTCTCCATCCA 59.308 55.000 0.00 0.00 34.66 3.41
405 719 0.987294 ACAAGGTGGTCTCCATCCAG 59.013 55.000 0.00 0.00 34.66 3.86
407 721 2.187958 CAAGGTGGTCTCCATCCAGTA 58.812 52.381 0.00 0.00 34.66 2.74
408 722 2.571653 CAAGGTGGTCTCCATCCAGTAA 59.428 50.000 0.00 0.00 34.66 2.24
409 723 2.915869 AGGTGGTCTCCATCCAGTAAA 58.084 47.619 0.00 0.00 34.66 2.01
410 724 2.572104 AGGTGGTCTCCATCCAGTAAAC 59.428 50.000 0.00 0.00 34.66 2.01
411 725 2.304761 GGTGGTCTCCATCCAGTAAACA 59.695 50.000 0.00 0.00 35.28 2.83
412 726 3.335579 GTGGTCTCCATCCAGTAAACAC 58.664 50.000 0.00 0.00 35.28 3.32
413 727 3.008049 GTGGTCTCCATCCAGTAAACACT 59.992 47.826 0.00 0.00 35.28 3.55
414 728 3.650942 TGGTCTCCATCCAGTAAACACTT 59.349 43.478 0.00 0.00 0.00 3.16
415 729 4.003648 GGTCTCCATCCAGTAAACACTTG 58.996 47.826 0.00 0.00 0.00 3.16
416 730 4.262894 GGTCTCCATCCAGTAAACACTTGA 60.263 45.833 0.00 0.00 0.00 3.02
417 731 4.932200 GTCTCCATCCAGTAAACACTTGAG 59.068 45.833 0.00 0.00 0.00 3.02
419 733 3.650942 TCCATCCAGTAAACACTTGAGGT 59.349 43.478 0.00 0.00 0.00 3.85
420 734 4.841813 TCCATCCAGTAAACACTTGAGGTA 59.158 41.667 0.00 0.00 0.00 3.08
421 735 4.935808 CCATCCAGTAAACACTTGAGGTAC 59.064 45.833 0.00 0.00 0.00 3.34
422 736 4.247267 TCCAGTAAACACTTGAGGTACG 57.753 45.455 0.00 0.00 0.00 3.67
423 737 3.638160 TCCAGTAAACACTTGAGGTACGT 59.362 43.478 0.00 0.00 0.00 3.57
424 738 3.985925 CCAGTAAACACTTGAGGTACGTC 59.014 47.826 8.63 8.63 0.00 4.34
425 739 3.667261 CAGTAAACACTTGAGGTACGTCG 59.333 47.826 10.75 0.00 0.00 5.12
426 740 1.494824 AAACACTTGAGGTACGTCGC 58.505 50.000 10.75 0.00 0.00 5.19
427 741 0.662374 AACACTTGAGGTACGTCGCG 60.662 55.000 10.75 0.00 0.00 5.87
428 742 1.081641 CACTTGAGGTACGTCGCGT 60.082 57.895 5.77 9.64 44.35 6.01
429 743 1.063951 CACTTGAGGTACGTCGCGTC 61.064 60.000 5.77 0.00 41.54 5.19
432 746 1.915614 TTGAGGTACGTCGCGTCTCC 61.916 60.000 5.77 11.60 41.54 3.71
434 748 1.712977 GAGGTACGTCGCGTCTCCAT 61.713 60.000 5.77 10.59 41.54 3.41
435 749 1.298190 GGTACGTCGCGTCTCCATC 60.298 63.158 5.77 0.00 41.54 3.51
436 750 1.298190 GTACGTCGCGTCTCCATCC 60.298 63.158 5.77 0.00 41.54 3.51
437 751 1.746239 TACGTCGCGTCTCCATCCA 60.746 57.895 5.77 0.00 41.54 3.41
438 752 1.712018 TACGTCGCGTCTCCATCCAG 61.712 60.000 5.77 0.00 41.54 3.86
439 753 2.885861 GTCGCGTCTCCATCCAGT 59.114 61.111 5.77 0.00 0.00 4.00
440 754 1.712018 CGTCGCGTCTCCATCCAGTA 61.712 60.000 5.77 0.00 0.00 2.74
442 756 1.135199 GTCGCGTCTCCATCCAGTAAA 60.135 52.381 5.77 0.00 0.00 2.01
443 757 1.135199 TCGCGTCTCCATCCAGTAAAC 60.135 52.381 5.77 0.00 0.00 2.01
445 759 2.000447 GCGTCTCCATCCAGTAAACAC 59.000 52.381 0.00 0.00 0.00 3.32
446 760 2.259618 CGTCTCCATCCAGTAAACACG 58.740 52.381 0.00 0.00 0.00 4.49
448 762 1.621317 TCTCCATCCAGTAAACACGCA 59.379 47.619 0.00 0.00 0.00 5.24
449 763 1.732259 CTCCATCCAGTAAACACGCAC 59.268 52.381 0.00 0.00 0.00 5.34
450 764 0.802494 CCATCCAGTAAACACGCACC 59.198 55.000 0.00 0.00 0.00 5.01
451 765 0.802494 CATCCAGTAAACACGCACCC 59.198 55.000 0.00 0.00 0.00 4.61
453 767 0.470766 TCCAGTAAACACGCACCCTT 59.529 50.000 0.00 0.00 0.00 3.95
454 768 0.872388 CCAGTAAACACGCACCCTTC 59.128 55.000 0.00 0.00 0.00 3.46
456 770 1.263217 CAGTAAACACGCACCCTTCAC 59.737 52.381 0.00 0.00 0.00 3.18
457 771 1.134340 AGTAAACACGCACCCTTCACA 60.134 47.619 0.00 0.00 0.00 3.58
458 772 1.877443 GTAAACACGCACCCTTCACAT 59.123 47.619 0.00 0.00 0.00 3.21
459 773 0.667993 AAACACGCACCCTTCACATG 59.332 50.000 0.00 0.00 0.00 3.21
460 774 1.172180 AACACGCACCCTTCACATGG 61.172 55.000 0.00 0.00 0.00 3.66
461 775 1.600636 CACGCACCCTTCACATGGT 60.601 57.895 0.00 0.00 34.40 3.55
463 777 0.398696 ACGCACCCTTCACATGGTTA 59.601 50.000 0.00 0.00 30.70 2.85
464 778 1.202830 ACGCACCCTTCACATGGTTAA 60.203 47.619 0.00 0.00 30.70 2.01
466 780 2.491693 CGCACCCTTCACATGGTTAATT 59.508 45.455 0.00 0.00 30.70 1.40
468 782 4.156922 CGCACCCTTCACATGGTTAATTAA 59.843 41.667 0.00 0.00 30.70 1.40
469 783 5.650543 GCACCCTTCACATGGTTAATTAAG 58.349 41.667 0.00 0.00 30.70 1.85
471 785 6.620678 CACCCTTCACATGGTTAATTAAGTG 58.379 40.000 0.00 3.79 30.70 3.16
472 786 5.185056 ACCCTTCACATGGTTAATTAAGTGC 59.815 40.000 0.00 0.00 0.00 4.40
473 787 5.184864 CCCTTCACATGGTTAATTAAGTGCA 59.815 40.000 0.00 0.00 0.00 4.57
474 788 6.324819 CCTTCACATGGTTAATTAAGTGCAG 58.675 40.000 0.00 3.55 0.00 4.41
475 789 5.895636 TCACATGGTTAATTAAGTGCAGG 57.104 39.130 0.00 0.00 0.00 4.85
476 790 5.565509 TCACATGGTTAATTAAGTGCAGGA 58.434 37.500 0.00 0.00 0.00 3.86
477 791 5.414454 TCACATGGTTAATTAAGTGCAGGAC 59.586 40.000 0.00 0.00 0.00 3.85
478 792 5.182950 CACATGGTTAATTAAGTGCAGGACA 59.817 40.000 0.00 0.00 0.00 4.02
479 793 5.772672 ACATGGTTAATTAAGTGCAGGACAA 59.227 36.000 0.00 0.00 0.00 3.18
480 794 5.957842 TGGTTAATTAAGTGCAGGACAAG 57.042 39.130 0.00 0.00 0.00 3.16
481 795 4.217550 TGGTTAATTAAGTGCAGGACAAGC 59.782 41.667 0.00 0.00 0.00 4.01
482 796 4.217550 GGTTAATTAAGTGCAGGACAAGCA 59.782 41.667 0.00 0.00 40.19 3.91
483 797 5.393962 GTTAATTAAGTGCAGGACAAGCAG 58.606 41.667 0.00 0.00 43.63 4.24
484 798 2.638480 TTAAGTGCAGGACAAGCAGT 57.362 45.000 0.00 0.00 46.96 4.40
485 799 1.882912 TAAGTGCAGGACAAGCAGTG 58.117 50.000 0.00 0.00 44.40 3.66
486 800 0.107017 AAGTGCAGGACAAGCAGTGT 60.107 50.000 0.00 0.00 44.40 3.55
487 801 0.107017 AGTGCAGGACAAGCAGTGTT 60.107 50.000 0.00 0.00 43.57 3.32
488 802 1.140852 AGTGCAGGACAAGCAGTGTTA 59.859 47.619 0.00 0.00 43.57 2.41
489 803 1.532868 GTGCAGGACAAGCAGTGTTAG 59.467 52.381 0.00 0.00 43.63 2.34
490 804 0.519077 GCAGGACAAGCAGTGTTAGC 59.481 55.000 0.00 0.00 41.96 3.09
491 805 1.882912 CAGGACAAGCAGTGTTAGCA 58.117 50.000 0.00 0.00 41.96 3.49
492 806 1.532868 CAGGACAAGCAGTGTTAGCAC 59.467 52.381 0.72 0.72 41.96 4.40
506 820 6.539649 GTGTTAGCACTTGTCATGAGTAAA 57.460 37.500 1.96 0.00 42.13 2.01
507 821 7.133891 GTGTTAGCACTTGTCATGAGTAAAT 57.866 36.000 1.96 0.00 42.13 1.40
508 822 8.251750 GTGTTAGCACTTGTCATGAGTAAATA 57.748 34.615 1.96 0.00 42.13 1.40
509 823 8.717821 GTGTTAGCACTTGTCATGAGTAAATAA 58.282 33.333 1.96 0.00 42.13 1.40
510 824 9.278978 TGTTAGCACTTGTCATGAGTAAATAAA 57.721 29.630 0.00 0.00 0.00 1.40
514 828 9.236006 AGCACTTGTCATGAGTAAATAAATTCT 57.764 29.630 0.00 0.00 0.00 2.40
515 829 9.846248 GCACTTGTCATGAGTAAATAAATTCTT 57.154 29.630 0.00 0.00 0.00 2.52
531 845 5.966742 AATTCTTTAGGTCAGGTTTCTGC 57.033 39.130 0.00 0.00 40.69 4.26
532 846 4.431416 TTCTTTAGGTCAGGTTTCTGCA 57.569 40.909 0.00 0.00 40.69 4.41
533 847 4.431416 TCTTTAGGTCAGGTTTCTGCAA 57.569 40.909 0.00 0.00 40.69 4.08
534 848 4.985538 TCTTTAGGTCAGGTTTCTGCAAT 58.014 39.130 0.00 0.00 40.69 3.56
535 849 6.121776 TCTTTAGGTCAGGTTTCTGCAATA 57.878 37.500 0.00 0.00 40.69 1.90
536 850 5.938125 TCTTTAGGTCAGGTTTCTGCAATAC 59.062 40.000 0.00 0.00 40.69 1.89
537 851 3.788227 AGGTCAGGTTTCTGCAATACA 57.212 42.857 0.00 0.00 40.69 2.29
538 852 4.098914 AGGTCAGGTTTCTGCAATACAA 57.901 40.909 0.00 0.00 40.69 2.41
539 853 4.469657 AGGTCAGGTTTCTGCAATACAAA 58.530 39.130 0.00 0.00 40.69 2.83
540 854 4.892934 AGGTCAGGTTTCTGCAATACAAAA 59.107 37.500 0.00 0.00 40.69 2.44
541 855 4.982295 GGTCAGGTTTCTGCAATACAAAAC 59.018 41.667 0.00 0.00 40.69 2.43
542 856 5.451242 GGTCAGGTTTCTGCAATACAAAACA 60.451 40.000 0.00 0.00 40.69 2.83
543 857 5.687285 GTCAGGTTTCTGCAATACAAAACAG 59.313 40.000 0.00 0.00 40.69 3.16
544 858 5.359576 TCAGGTTTCTGCAATACAAAACAGT 59.640 36.000 0.00 0.00 40.69 3.55
545 859 5.459762 CAGGTTTCTGCAATACAAAACAGTG 59.540 40.000 0.00 0.00 34.08 3.66
546 860 4.209080 GGTTTCTGCAATACAAAACAGTGC 59.791 41.667 0.00 0.00 34.08 4.40
547 861 3.641437 TCTGCAATACAAAACAGTGCC 57.359 42.857 0.00 0.00 34.25 5.01
548 862 2.954989 TCTGCAATACAAAACAGTGCCA 59.045 40.909 0.00 0.00 34.25 4.92
549 863 3.004629 TCTGCAATACAAAACAGTGCCAG 59.995 43.478 0.00 0.00 34.25 4.85
550 864 2.061028 GCAATACAAAACAGTGCCAGC 58.939 47.619 0.00 0.00 0.00 4.85
551 865 2.545532 GCAATACAAAACAGTGCCAGCA 60.546 45.455 0.00 0.00 0.00 4.41
552 866 3.311106 CAATACAAAACAGTGCCAGCAG 58.689 45.455 0.00 0.00 0.00 4.24
553 867 2.340210 TACAAAACAGTGCCAGCAGA 57.660 45.000 0.00 0.00 0.00 4.26
554 868 1.027357 ACAAAACAGTGCCAGCAGAG 58.973 50.000 0.00 0.00 0.00 3.35
555 869 0.318445 CAAAACAGTGCCAGCAGAGC 60.318 55.000 0.00 0.00 0.00 4.09
556 870 0.752743 AAAACAGTGCCAGCAGAGCA 60.753 50.000 0.00 0.00 38.08 4.26
561 875 2.281970 TGCCAGCAGAGCACTTGG 60.282 61.111 0.00 0.00 34.69 3.61
562 876 2.282040 GCCAGCAGAGCACTTGGT 60.282 61.111 4.14 0.00 33.21 3.67
563 877 2.623915 GCCAGCAGAGCACTTGGTG 61.624 63.158 4.14 5.73 36.51 4.17
564 878 1.071987 CCAGCAGAGCACTTGGTGA 59.928 57.895 13.60 0.00 35.23 4.02
565 879 0.535780 CCAGCAGAGCACTTGGTGAA 60.536 55.000 13.60 0.00 35.23 3.18
566 880 1.531423 CAGCAGAGCACTTGGTGAAT 58.469 50.000 8.13 0.00 35.23 2.57
567 881 1.199327 CAGCAGAGCACTTGGTGAATG 59.801 52.381 8.13 0.00 35.23 2.67
568 882 0.524862 GCAGAGCACTTGGTGAATGG 59.475 55.000 1.57 0.00 35.23 3.16
569 883 1.883638 GCAGAGCACTTGGTGAATGGA 60.884 52.381 1.57 0.00 35.23 3.41
570 884 2.507484 CAGAGCACTTGGTGAATGGAA 58.493 47.619 1.57 0.00 35.23 3.53
571 885 2.486982 CAGAGCACTTGGTGAATGGAAG 59.513 50.000 1.57 0.00 35.23 3.46
572 886 2.107204 AGAGCACTTGGTGAATGGAAGT 59.893 45.455 1.57 0.00 35.23 3.01
573 887 2.485814 GAGCACTTGGTGAATGGAAGTC 59.514 50.000 1.57 0.00 35.23 3.01
574 888 2.158623 AGCACTTGGTGAATGGAAGTCA 60.159 45.455 1.57 0.00 39.41 3.41
575 889 2.622942 GCACTTGGTGAATGGAAGTCAA 59.377 45.455 1.57 0.00 45.34 3.18
576 890 3.304928 GCACTTGGTGAATGGAAGTCAAG 60.305 47.826 1.57 0.00 45.34 3.02
577 891 3.885297 CACTTGGTGAATGGAAGTCAAGT 59.115 43.478 0.00 0.00 45.34 3.16
578 892 4.023707 CACTTGGTGAATGGAAGTCAAGTC 60.024 45.833 0.00 0.00 45.34 3.01
579 893 3.855255 TGGTGAATGGAAGTCAAGTCA 57.145 42.857 0.00 0.00 45.34 3.41
580 894 3.743521 TGGTGAATGGAAGTCAAGTCAG 58.256 45.455 0.00 0.00 45.34 3.51
581 895 3.390967 TGGTGAATGGAAGTCAAGTCAGA 59.609 43.478 0.00 0.00 45.34 3.27
582 896 3.748568 GGTGAATGGAAGTCAAGTCAGAC 59.251 47.826 0.00 0.00 45.34 3.51
583 897 4.380531 GTGAATGGAAGTCAAGTCAGACA 58.619 43.478 2.66 0.00 45.34 3.41
584 898 4.212214 GTGAATGGAAGTCAAGTCAGACAC 59.788 45.833 2.66 0.00 45.34 3.67
585 899 4.101585 TGAATGGAAGTCAAGTCAGACACT 59.898 41.667 2.66 0.00 38.37 3.55
586 900 7.403346 GTGAATGGAAGTCAAGTCAGACACTT 61.403 42.308 2.66 3.89 45.34 3.16
591 905 4.779475 AAGTCAGACACTTGCCGG 57.221 55.556 2.66 0.00 44.28 6.13
592 906 1.830145 AAGTCAGACACTTGCCGGT 59.170 52.632 1.90 0.00 44.28 5.28
593 907 1.045407 AAGTCAGACACTTGCCGGTA 58.955 50.000 1.90 0.00 44.28 4.02
594 908 0.603569 AGTCAGACACTTGCCGGTAG 59.396 55.000 1.90 3.45 26.56 3.18
595 909 0.389948 GTCAGACACTTGCCGGTAGG 60.390 60.000 1.90 0.10 41.62 3.18
612 926 2.671619 GCAGTTGGCCGCACCTAA 60.672 61.111 0.00 0.00 40.22 2.69
613 927 2.046285 GCAGTTGGCCGCACCTAAT 61.046 57.895 0.00 0.00 40.22 1.73
614 928 1.802636 CAGTTGGCCGCACCTAATG 59.197 57.895 0.00 0.00 40.22 1.90
625 939 1.812235 CACCTAATGCTGCAGACACA 58.188 50.000 20.43 6.41 0.00 3.72
626 940 1.466167 CACCTAATGCTGCAGACACAC 59.534 52.381 20.43 0.00 0.00 3.82
627 941 0.723414 CCTAATGCTGCAGACACACG 59.277 55.000 20.43 6.65 0.00 4.49
628 942 1.672737 CCTAATGCTGCAGACACACGA 60.673 52.381 20.43 0.00 0.00 4.35
629 943 2.068519 CTAATGCTGCAGACACACGAA 58.931 47.619 20.43 0.00 0.00 3.85
630 944 1.527034 AATGCTGCAGACACACGAAT 58.473 45.000 20.43 0.00 0.00 3.34
631 945 1.081892 ATGCTGCAGACACACGAATC 58.918 50.000 20.43 0.00 0.00 2.52
632 946 0.249826 TGCTGCAGACACACGAATCA 60.250 50.000 20.43 0.00 0.00 2.57
633 947 0.867746 GCTGCAGACACACGAATCAA 59.132 50.000 20.43 0.00 0.00 2.57
634 948 1.264020 GCTGCAGACACACGAATCAAA 59.736 47.619 20.43 0.00 0.00 2.69
635 949 2.908634 CTGCAGACACACGAATCAAAC 58.091 47.619 8.42 0.00 0.00 2.93
636 950 2.284190 TGCAGACACACGAATCAAACA 58.716 42.857 0.00 0.00 0.00 2.83
637 951 2.287644 TGCAGACACACGAATCAAACAG 59.712 45.455 0.00 0.00 0.00 3.16
638 952 2.908634 CAGACACACGAATCAAACAGC 58.091 47.619 0.00 0.00 0.00 4.40
639 953 1.873591 AGACACACGAATCAAACAGCC 59.126 47.619 0.00 0.00 0.00 4.85
640 954 1.601903 GACACACGAATCAAACAGCCA 59.398 47.619 0.00 0.00 0.00 4.75
641 955 2.020720 ACACACGAATCAAACAGCCAA 58.979 42.857 0.00 0.00 0.00 4.52
642 956 2.622942 ACACACGAATCAAACAGCCAAT 59.377 40.909 0.00 0.00 0.00 3.16
643 957 3.236816 CACACGAATCAAACAGCCAATC 58.763 45.455 0.00 0.00 0.00 2.67
644 958 3.058016 CACACGAATCAAACAGCCAATCT 60.058 43.478 0.00 0.00 0.00 2.40
645 959 4.154015 CACACGAATCAAACAGCCAATCTA 59.846 41.667 0.00 0.00 0.00 1.98
646 960 4.154195 ACACGAATCAAACAGCCAATCTAC 59.846 41.667 0.00 0.00 0.00 2.59
647 961 3.370978 ACGAATCAAACAGCCAATCTACG 59.629 43.478 0.00 0.00 0.00 3.51
648 962 3.242413 CGAATCAAACAGCCAATCTACGG 60.242 47.826 0.00 0.00 0.00 4.02
649 963 3.627395 ATCAAACAGCCAATCTACGGA 57.373 42.857 0.00 0.00 0.00 4.69
650 964 3.410631 TCAAACAGCCAATCTACGGAA 57.589 42.857 0.00 0.00 0.00 4.30
651 965 3.950397 TCAAACAGCCAATCTACGGAAT 58.050 40.909 0.00 0.00 0.00 3.01
652 966 5.092554 TCAAACAGCCAATCTACGGAATA 57.907 39.130 0.00 0.00 0.00 1.75
653 967 5.116180 TCAAACAGCCAATCTACGGAATAG 58.884 41.667 0.00 0.00 0.00 1.73
654 968 5.105106 TCAAACAGCCAATCTACGGAATAGA 60.105 40.000 0.00 0.00 44.25 1.98
669 983 4.970611 CGGAATAGATGCGTATTAGGATCG 59.029 45.833 0.00 0.00 42.68 3.69
670 984 5.282510 GGAATAGATGCGTATTAGGATCGG 58.717 45.833 0.00 0.00 42.68 4.18
671 985 2.656560 AGATGCGTATTAGGATCGGC 57.343 50.000 0.00 0.00 42.68 5.54
672 986 1.893137 AGATGCGTATTAGGATCGGCA 59.107 47.619 0.00 0.00 42.68 5.69
673 987 2.497675 AGATGCGTATTAGGATCGGCAT 59.502 45.455 0.00 0.00 42.68 4.40
674 988 2.831685 TGCGTATTAGGATCGGCATT 57.168 45.000 0.00 0.00 0.00 3.56
675 989 2.683968 TGCGTATTAGGATCGGCATTC 58.316 47.619 0.00 0.00 0.00 2.67
676 990 2.299013 TGCGTATTAGGATCGGCATTCT 59.701 45.455 0.00 0.00 0.00 2.40
677 991 2.668457 GCGTATTAGGATCGGCATTCTG 59.332 50.000 0.00 0.00 0.00 3.02
678 992 3.614150 GCGTATTAGGATCGGCATTCTGA 60.614 47.826 0.00 0.00 0.00 3.27
679 993 4.556233 CGTATTAGGATCGGCATTCTGAA 58.444 43.478 0.00 0.00 0.00 3.02
680 994 5.171476 CGTATTAGGATCGGCATTCTGAAT 58.829 41.667 0.00 0.00 0.00 2.57
681 995 5.639506 CGTATTAGGATCGGCATTCTGAATT 59.360 40.000 0.00 0.00 0.00 2.17
682 996 6.147821 CGTATTAGGATCGGCATTCTGAATTT 59.852 38.462 0.00 0.00 0.00 1.82
683 997 6.566197 ATTAGGATCGGCATTCTGAATTTC 57.434 37.500 0.00 0.00 0.00 2.17
684 998 4.162040 AGGATCGGCATTCTGAATTTCT 57.838 40.909 0.00 0.00 0.00 2.52
685 999 4.530875 AGGATCGGCATTCTGAATTTCTT 58.469 39.130 0.00 0.00 0.00 2.52
686 1000 4.952335 AGGATCGGCATTCTGAATTTCTTT 59.048 37.500 0.00 0.00 0.00 2.52
687 1001 5.420104 AGGATCGGCATTCTGAATTTCTTTT 59.580 36.000 0.00 0.00 0.00 2.27
688 1002 6.603201 AGGATCGGCATTCTGAATTTCTTTTA 59.397 34.615 0.00 0.00 0.00 1.52
689 1003 6.914757 GGATCGGCATTCTGAATTTCTTTTAG 59.085 38.462 0.00 0.00 0.00 1.85
690 1004 5.640732 TCGGCATTCTGAATTTCTTTTAGC 58.359 37.500 0.00 0.00 0.00 3.09
691 1005 4.496895 CGGCATTCTGAATTTCTTTTAGCG 59.503 41.667 0.00 0.00 0.00 4.26
692 1006 5.640732 GGCATTCTGAATTTCTTTTAGCGA 58.359 37.500 0.00 0.00 0.00 4.93
693 1007 5.513141 GGCATTCTGAATTTCTTTTAGCGAC 59.487 40.000 0.00 0.00 0.00 5.19
694 1008 5.513141 GCATTCTGAATTTCTTTTAGCGACC 59.487 40.000 0.00 0.00 0.00 4.79
695 1009 4.921470 TCTGAATTTCTTTTAGCGACCG 57.079 40.909 0.00 0.00 0.00 4.79
696 1010 4.562082 TCTGAATTTCTTTTAGCGACCGA 58.438 39.130 0.00 0.00 0.00 4.69
697 1011 4.992319 TCTGAATTTCTTTTAGCGACCGAA 59.008 37.500 0.00 0.00 0.00 4.30
698 1012 5.467399 TCTGAATTTCTTTTAGCGACCGAAA 59.533 36.000 0.00 0.00 0.00 3.46
699 1013 6.017770 TCTGAATTTCTTTTAGCGACCGAAAA 60.018 34.615 0.00 0.00 0.00 2.29
700 1014 5.910723 TGAATTTCTTTTAGCGACCGAAAAC 59.089 36.000 0.00 0.00 0.00 2.43
701 1015 4.879104 TTTCTTTTAGCGACCGAAAACA 57.121 36.364 0.00 0.00 0.00 2.83
702 1016 4.461992 TTCTTTTAGCGACCGAAAACAG 57.538 40.909 0.00 0.00 0.00 3.16
703 1017 2.222445 TCTTTTAGCGACCGAAAACAGC 59.778 45.455 0.00 0.00 0.00 4.40
704 1018 0.869730 TTTAGCGACCGAAAACAGCC 59.130 50.000 0.00 0.00 0.00 4.85
705 1019 0.249953 TTAGCGACCGAAAACAGCCA 60.250 50.000 0.00 0.00 0.00 4.75
706 1020 0.947180 TAGCGACCGAAAACAGCCAC 60.947 55.000 0.00 0.00 0.00 5.01
707 1021 2.549282 CGACCGAAAACAGCCACG 59.451 61.111 0.00 0.00 0.00 4.94
708 1022 2.251371 GACCGAAAACAGCCACGC 59.749 61.111 0.00 0.00 0.00 5.34
709 1023 2.515057 ACCGAAAACAGCCACGCA 60.515 55.556 0.00 0.00 0.00 5.24
710 1024 2.054140 GACCGAAAACAGCCACGCAA 62.054 55.000 0.00 0.00 0.00 4.85
712 1026 1.370414 CGAAAACAGCCACGCAAGG 60.370 57.895 0.00 0.00 46.39 3.61
713 1027 1.007387 GAAAACAGCCACGCAAGGG 60.007 57.895 0.00 0.00 46.39 3.95
721 1035 3.365265 CACGCAAGGGGAAGGCAC 61.365 66.667 0.00 0.00 46.39 5.01
722 1036 3.884774 ACGCAAGGGGAAGGCACA 61.885 61.111 0.00 0.00 46.39 4.57
723 1037 3.058160 CGCAAGGGGAAGGCACAG 61.058 66.667 0.00 0.00 0.00 3.66
724 1038 2.436109 GCAAGGGGAAGGCACAGA 59.564 61.111 0.00 0.00 0.00 3.41
725 1039 1.000396 GCAAGGGGAAGGCACAGAT 60.000 57.895 0.00 0.00 0.00 2.90
726 1040 1.318158 GCAAGGGGAAGGCACAGATG 61.318 60.000 0.00 0.00 0.00 2.90
727 1041 0.682209 CAAGGGGAAGGCACAGATGG 60.682 60.000 0.00 0.00 0.00 3.51
728 1042 1.867595 AAGGGGAAGGCACAGATGGG 61.868 60.000 0.00 0.00 0.00 4.00
729 1043 2.440980 GGGAAGGCACAGATGGGC 60.441 66.667 0.00 0.00 45.53 5.36
735 1049 3.490759 GCACAGATGGGCGACACG 61.491 66.667 0.00 0.00 33.30 4.49
736 1050 2.048222 CACAGATGGGCGACACGT 60.048 61.111 0.00 0.00 0.00 4.49
737 1051 2.048222 ACAGATGGGCGACACGTG 60.048 61.111 15.48 15.48 0.00 4.49
738 1052 3.490759 CAGATGGGCGACACGTGC 61.491 66.667 17.22 7.72 0.00 5.34
766 1080 1.259316 GCGCAGGCAAGATTTTTACG 58.741 50.000 0.30 0.00 39.62 3.18
769 1083 2.159627 CGCAGGCAAGATTTTTACGTCT 59.840 45.455 0.00 0.00 0.00 4.18
775 1089 3.668656 GCAAGATTTTTACGTCTGTTGCC 59.331 43.478 0.00 0.00 0.00 4.52
777 1091 4.749245 AGATTTTTACGTCTGTTGCCTG 57.251 40.909 0.00 0.00 0.00 4.85
789 1103 0.673985 GTTGCCTGTTCAAACCCTCC 59.326 55.000 0.00 0.00 0.00 4.30
799 1113 4.414182 TGTTCAAACCCTCCCTCTCTTTTA 59.586 41.667 0.00 0.00 0.00 1.52
800 1114 5.074515 TGTTCAAACCCTCCCTCTCTTTTAT 59.925 40.000 0.00 0.00 0.00 1.40
801 1115 6.273730 TGTTCAAACCCTCCCTCTCTTTTATA 59.726 38.462 0.00 0.00 0.00 0.98
802 1116 6.963117 TCAAACCCTCCCTCTCTTTTATAA 57.037 37.500 0.00 0.00 0.00 0.98
803 1117 7.525158 TCAAACCCTCCCTCTCTTTTATAAT 57.475 36.000 0.00 0.00 0.00 1.28
804 1118 7.346471 TCAAACCCTCCCTCTCTTTTATAATG 58.654 38.462 0.00 0.00 0.00 1.90
805 1119 5.913946 ACCCTCCCTCTCTTTTATAATGG 57.086 43.478 0.00 0.00 0.00 3.16
806 1120 5.297799 ACCCTCCCTCTCTTTTATAATGGT 58.702 41.667 0.00 0.00 0.00 3.55
807 1121 5.736616 ACCCTCCCTCTCTTTTATAATGGTT 59.263 40.000 0.00 0.00 0.00 3.67
808 1122 6.912561 ACCCTCCCTCTCTTTTATAATGGTTA 59.087 38.462 0.00 0.00 0.00 2.85
809 1123 7.072581 ACCCTCCCTCTCTTTTATAATGGTTAG 59.927 40.741 0.00 0.00 0.00 2.34
810 1124 7.072581 CCCTCCCTCTCTTTTATAATGGTTAGT 59.927 40.741 0.00 0.00 0.00 2.24
879 1197 2.109126 GGCATTGACTCTGGCGTCC 61.109 63.158 0.00 0.00 32.97 4.79
880 1198 2.109126 GCATTGACTCTGGCGTCCC 61.109 63.158 0.00 0.00 32.97 4.46
891 1209 1.447314 GGCGTCCCGTTGACTAAGG 60.447 63.158 1.51 0.00 42.13 2.69
1019 1341 3.388676 TGAATGCCAATCCAATCCATTCC 59.611 43.478 8.61 0.00 40.43 3.01
1020 1342 2.546652 TGCCAATCCAATCCATTCCA 57.453 45.000 0.00 0.00 0.00 3.53
1022 1344 3.386063 TGCCAATCCAATCCATTCCAAT 58.614 40.909 0.00 0.00 0.00 3.16
1025 1347 4.818005 GCCAATCCAATCCATTCCAATTTC 59.182 41.667 0.00 0.00 0.00 2.17
1026 1348 5.370679 CCAATCCAATCCATTCCAATTTCC 58.629 41.667 0.00 0.00 0.00 3.13
1027 1349 5.104444 CCAATCCAATCCATTCCAATTTCCA 60.104 40.000 0.00 0.00 0.00 3.53
1028 1350 6.416415 CAATCCAATCCATTCCAATTTCCAA 58.584 36.000 0.00 0.00 0.00 3.53
1030 1352 4.080975 TCCAATCCATTCCAATTTCCAAGC 60.081 41.667 0.00 0.00 0.00 4.01
1031 1353 4.323638 CCAATCCATTCCAATTTCCAAGCA 60.324 41.667 0.00 0.00 0.00 3.91
1032 1354 3.959535 TCCATTCCAATTTCCAAGCAC 57.040 42.857 0.00 0.00 0.00 4.40
1033 1355 2.230992 TCCATTCCAATTTCCAAGCACG 59.769 45.455 0.00 0.00 0.00 5.34
1069 1421 5.741388 AGCAATGAATCTTGAATCGGTAC 57.259 39.130 0.00 0.00 0.00 3.34
1079 1434 1.476891 TGAATCGGTACTGAGTCCAGC 59.523 52.381 25.07 5.77 44.16 4.85
1080 1435 1.476891 GAATCGGTACTGAGTCCAGCA 59.523 52.381 19.20 0.00 44.16 4.41
1081 1436 1.107114 ATCGGTACTGAGTCCAGCAG 58.893 55.000 10.75 0.00 44.16 4.24
1089 1444 1.153745 GAGTCCAGCAGCACTACCG 60.154 63.158 0.00 0.00 0.00 4.02
1120 1475 4.093291 CCTGCGGCCTCTTGAGCT 62.093 66.667 0.00 0.00 0.00 4.09
1137 1492 1.392710 GCTTGGCGCTCCTAGTCCTA 61.393 60.000 7.64 0.00 37.50 2.94
1161 1516 2.660064 AACCACCCGGCTGCTAGAG 61.660 63.158 0.00 0.00 34.57 2.43
1227 1582 4.754667 GGCCTTCGTGGGACGTCC 62.755 72.222 27.04 27.04 43.14 4.79
1347 1705 2.166459 CGTCATGCCTTTCCTCTACAGA 59.834 50.000 0.00 0.00 0.00 3.41
1354 1712 2.094130 CCTTTCCTCTACAGAACCGTCC 60.094 54.545 0.00 0.00 0.00 4.79
1503 1864 4.069232 TCCAAGCTCCTCGCCGTG 62.069 66.667 0.00 0.00 40.39 4.94
1624 1990 1.094785 TGCGCCTCTTTTTGATAGCC 58.905 50.000 4.18 0.00 0.00 3.93
1625 1991 0.028110 GCGCCTCTTTTTGATAGCCG 59.972 55.000 0.00 0.00 0.00 5.52
1631 1997 3.119849 CCTCTTTTTGATAGCCGTTGTGG 60.120 47.826 0.00 0.00 42.50 4.17
1640 2006 3.508474 CCGTTGTGGCAAGTGTGT 58.492 55.556 0.00 0.00 0.00 3.72
1642 2008 1.372838 CCGTTGTGGCAAGTGTGTGA 61.373 55.000 0.00 0.00 0.00 3.58
1645 2011 2.285083 GTTGTGGCAAGTGTGTGACTA 58.715 47.619 0.00 0.00 33.09 2.59
1647 2013 3.207265 TGTGGCAAGTGTGTGACTAAT 57.793 42.857 0.00 0.00 33.09 1.73
1674 2056 2.166870 TGATTTGCAGATCATGTTGCCC 59.833 45.455 15.50 0.00 39.54 5.36
1764 2146 4.349636 TGTGAGGTGGATGTTTCCTTAGAA 59.650 41.667 0.00 0.00 43.07 2.10
1845 2227 6.204882 TCGAAGGAAGAAGGATTTTTCAACTC 59.795 38.462 0.00 0.00 0.00 3.01
1996 5970 5.008165 AGTACTACTTCCACCTTACCACT 57.992 43.478 0.00 0.00 0.00 4.00
1997 5971 4.771054 AGTACTACTTCCACCTTACCACTG 59.229 45.833 0.00 0.00 0.00 3.66
2021 5995 3.364964 CGACCAGGTGTTTTGTGCTTATC 60.365 47.826 0.00 0.00 0.00 1.75
2480 6616 4.722194 TCGAGTTGCTGCAAACATTTATC 58.278 39.130 17.80 1.84 32.21 1.75
2489 6626 5.449041 GCTGCAAACATTTATCGGATCAGAA 60.449 40.000 0.00 0.00 0.00 3.02
2613 6755 0.038709 GGAGATTGAGATCGGAGGCG 60.039 60.000 0.00 0.00 37.37 5.52
2624 6766 2.106332 GGAGGCGTCACATACCCG 59.894 66.667 8.91 0.00 0.00 5.28
2879 7021 2.837883 GCTCGCCCCGTCGTATACA 61.838 63.158 3.32 0.00 0.00 2.29
2936 7078 4.015764 TGCATGGTGCTCAAATTAAGCTA 58.984 39.130 12.47 2.41 45.31 3.32
2970 7112 8.881743 CCTCTTCGTAGTAGTATCACCATATAC 58.118 40.741 0.00 0.00 33.33 1.47
3014 7158 9.950680 TTTGTTTTTGAGAATGATTCACTCTAC 57.049 29.630 8.03 0.00 0.00 2.59
3015 7159 8.675705 TGTTTTTGAGAATGATTCACTCTACA 57.324 30.769 8.03 0.00 0.00 2.74
3016 7160 9.288576 TGTTTTTGAGAATGATTCACTCTACAT 57.711 29.630 8.03 0.00 0.00 2.29
3017 7161 9.552114 GTTTTTGAGAATGATTCACTCTACATG 57.448 33.333 8.03 0.00 0.00 3.21
3018 7162 8.853077 TTTTGAGAATGATTCACTCTACATGT 57.147 30.769 8.03 2.69 0.00 3.21
3019 7163 9.942850 TTTTGAGAATGATTCACTCTACATGTA 57.057 29.630 8.03 5.25 0.00 2.29
3021 7165 9.755804 TTGAGAATGATTCACTCTACATGTATC 57.244 33.333 5.91 0.74 0.00 2.24
3022 7166 8.917088 TGAGAATGATTCACTCTACATGTATCA 58.083 33.333 5.91 6.84 37.97 2.15
3023 7167 9.926158 GAGAATGATTCACTCTACATGTATCAT 57.074 33.333 5.91 8.90 42.80 2.45
3027 7171 8.992835 TGATTCACTCTACATGTATCATATGC 57.007 34.615 5.91 0.00 31.32 3.14
3049 7193 4.640201 GCACTCTTATCTTGGCCATGTAAA 59.360 41.667 17.54 11.90 0.00 2.01
3135 7282 8.912988 TCATCTGTTTTTACTCTTTGACCAAAT 58.087 29.630 0.00 0.00 0.00 2.32
3136 7283 9.533253 CATCTGTTTTTACTCTTTGACCAAATT 57.467 29.630 0.00 0.00 0.00 1.82
3209 7356 3.116531 GTAACACCGGTGCGCTCC 61.117 66.667 34.26 18.51 0.00 4.70
3221 7368 1.129437 GTGCGCTCCTCAAGTGAATTC 59.871 52.381 9.73 0.00 37.73 2.17
3242 7389 7.830099 ATTCTTATCATTTCCCATGGACTTC 57.170 36.000 15.22 0.00 0.00 3.01
3294 7441 1.204146 GGCTAAGTCCCTCCACATGA 58.796 55.000 0.00 0.00 0.00 3.07
3339 7486 3.521531 TCAGCCCATAAGTCCAACACATA 59.478 43.478 0.00 0.00 0.00 2.29
3387 7534 0.320771 GGTTGAGAGCGCTTCCAAGA 60.321 55.000 20.76 3.63 0.00 3.02
3536 7691 1.135859 GTTCTGTCCAGATTTGCTGCG 60.136 52.381 0.00 0.00 43.50 5.18
3686 7841 3.516700 TGGAGCATCAGATTTGAGAGTGA 59.483 43.478 0.00 0.00 36.61 3.41
3909 8066 5.522456 TGTAAACTCTGCTTTGCTGAAATG 58.478 37.500 1.25 0.00 36.19 2.32
3918 8075 3.572584 CTTTGCTGAAATGTTGCCTCTC 58.427 45.455 0.00 0.00 0.00 3.20
3923 8080 1.071542 TGAAATGTTGCCTCTCGTGGA 59.928 47.619 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.918608 TCCTGGTAAGATGTAGCTGAAATC 58.081 41.667 0.00 0.00 0.00 2.17
2 3 5.734720 CTTCCTGGTAAGATGTAGCTGAAA 58.265 41.667 0.00 0.00 0.00 2.69
4 5 3.133003 GCTTCCTGGTAAGATGTAGCTGA 59.867 47.826 0.00 0.00 0.00 4.26
5 6 3.133721 AGCTTCCTGGTAAGATGTAGCTG 59.866 47.826 0.00 0.00 36.46 4.24
6 7 3.379452 AGCTTCCTGGTAAGATGTAGCT 58.621 45.455 9.23 0.00 33.22 3.32
7 8 3.828875 AGCTTCCTGGTAAGATGTAGC 57.171 47.619 9.23 0.00 0.00 3.58
11 12 6.599244 TGTCAAATTAGCTTCCTGGTAAGATG 59.401 38.462 0.00 0.00 41.22 2.90
26 27 3.378112 ACGATGGTGGCATGTCAAATTAG 59.622 43.478 0.00 0.00 0.00 1.73
59 60 6.154877 TGCTCAATTCACAAACCCATCATAAT 59.845 34.615 0.00 0.00 0.00 1.28
60 61 5.479724 TGCTCAATTCACAAACCCATCATAA 59.520 36.000 0.00 0.00 0.00 1.90
61 62 5.015515 TGCTCAATTCACAAACCCATCATA 58.984 37.500 0.00 0.00 0.00 2.15
62 63 3.833650 TGCTCAATTCACAAACCCATCAT 59.166 39.130 0.00 0.00 0.00 2.45
63 64 3.229293 TGCTCAATTCACAAACCCATCA 58.771 40.909 0.00 0.00 0.00 3.07
64 65 3.841643 CTGCTCAATTCACAAACCCATC 58.158 45.455 0.00 0.00 0.00 3.51
65 66 2.028748 GCTGCTCAATTCACAAACCCAT 60.029 45.455 0.00 0.00 0.00 4.00
66 67 1.340889 GCTGCTCAATTCACAAACCCA 59.659 47.619 0.00 0.00 0.00 4.51
67 68 1.340889 TGCTGCTCAATTCACAAACCC 59.659 47.619 0.00 0.00 0.00 4.11
68 69 2.798976 TGCTGCTCAATTCACAAACC 57.201 45.000 0.00 0.00 0.00 3.27
69 70 3.904571 TCATGCTGCTCAATTCACAAAC 58.095 40.909 0.00 0.00 0.00 2.93
103 104 3.981071 TCCAGAACCTGAGTTGGTATG 57.019 47.619 0.00 0.00 39.83 2.39
108 109 6.881065 TGAGATTATTTCCAGAACCTGAGTTG 59.119 38.462 0.00 0.00 35.94 3.16
109 110 7.020827 TGAGATTATTTCCAGAACCTGAGTT 57.979 36.000 0.00 0.00 39.54 3.01
120 121 4.816385 GGATGCGTTCTGAGATTATTTCCA 59.184 41.667 0.00 0.00 0.00 3.53
121 122 5.049818 CAGGATGCGTTCTGAGATTATTTCC 60.050 44.000 8.72 0.00 33.11 3.13
177 445 4.171878 AGCACCACTCAGCTCTACTATA 57.828 45.455 0.00 0.00 36.00 1.31
178 446 3.025322 AGCACCACTCAGCTCTACTAT 57.975 47.619 0.00 0.00 36.00 2.12
179 447 2.516227 AGCACCACTCAGCTCTACTA 57.484 50.000 0.00 0.00 36.00 1.82
180 448 2.096248 GTAGCACCACTCAGCTCTACT 58.904 52.381 0.00 0.00 42.05 2.57
181 449 1.202200 CGTAGCACCACTCAGCTCTAC 60.202 57.143 0.00 0.00 42.05 2.59
182 450 1.095600 CGTAGCACCACTCAGCTCTA 58.904 55.000 0.00 0.00 42.05 2.43
183 451 0.896019 ACGTAGCACCACTCAGCTCT 60.896 55.000 0.00 0.00 42.05 4.09
184 452 0.038159 AACGTAGCACCACTCAGCTC 60.038 55.000 0.00 0.00 42.05 4.09
185 453 0.319900 CAACGTAGCACCACTCAGCT 60.320 55.000 0.00 0.00 44.55 4.24
190 458 3.997762 TGATTAACAACGTAGCACCACT 58.002 40.909 0.00 0.00 0.00 4.00
191 459 4.390603 TGATGATTAACAACGTAGCACCAC 59.609 41.667 0.00 0.00 0.00 4.16
209 477 4.081697 TGGCGACTTCAGAATACTTGATGA 60.082 41.667 0.00 0.00 0.00 2.92
214 482 7.047891 TCAAATATGGCGACTTCAGAATACTT 58.952 34.615 0.00 0.00 0.00 2.24
216 484 6.564873 GCTCAAATATGGCGACTTCAGAATAC 60.565 42.308 0.00 0.00 0.00 1.89
218 486 4.274459 GCTCAAATATGGCGACTTCAGAAT 59.726 41.667 0.00 0.00 0.00 2.40
219 487 3.623060 GCTCAAATATGGCGACTTCAGAA 59.377 43.478 0.00 0.00 0.00 3.02
220 488 3.198068 GCTCAAATATGGCGACTTCAGA 58.802 45.455 0.00 0.00 0.00 3.27
221 489 2.033407 CGCTCAAATATGGCGACTTCAG 60.033 50.000 0.06 0.00 44.03 3.02
222 490 1.933181 CGCTCAAATATGGCGACTTCA 59.067 47.619 0.06 0.00 44.03 3.02
224 492 2.024176 ACGCTCAAATATGGCGACTT 57.976 45.000 13.27 0.00 44.03 3.01
225 493 2.024176 AACGCTCAAATATGGCGACT 57.976 45.000 13.27 0.00 44.03 4.18
241 555 2.672961 TGGGAGATGTCTGCTAAACG 57.327 50.000 1.56 0.00 34.50 3.60
245 559 6.409704 GCAATATTATGGGAGATGTCTGCTA 58.590 40.000 1.56 0.00 34.50 3.49
246 560 5.251764 GCAATATTATGGGAGATGTCTGCT 58.748 41.667 1.56 0.00 34.50 4.24
248 562 5.240891 ACGCAATATTATGGGAGATGTCTG 58.759 41.667 0.00 0.00 37.06 3.51
256 570 2.365941 TCCGTGACGCAATATTATGGGA 59.634 45.455 0.00 0.00 37.06 4.37
259 573 5.458015 TCTACTCCGTGACGCAATATTATG 58.542 41.667 0.00 0.00 0.00 1.90
267 581 0.393944 ATCCTCTACTCCGTGACGCA 60.394 55.000 0.00 0.00 0.00 5.24
269 583 0.945813 GGATCCTCTACTCCGTGACG 59.054 60.000 3.84 0.00 0.00 4.35
271 585 2.241430 TCAAGGATCCTCTACTCCGTGA 59.759 50.000 16.52 9.62 44.36 4.35
274 588 3.216187 TCTCAAGGATCCTCTACTCCG 57.784 52.381 16.52 0.00 36.62 4.63
276 590 5.221422 CCATGTTCTCAAGGATCCTCTACTC 60.221 48.000 16.52 5.38 34.72 2.59
281 595 3.198635 TCACCATGTTCTCAAGGATCCTC 59.801 47.826 16.52 1.29 36.13 3.71
284 598 3.881688 CCATCACCATGTTCTCAAGGATC 59.118 47.826 0.00 0.00 36.13 3.36
290 604 3.704061 TCGTATCCATCACCATGTTCTCA 59.296 43.478 0.00 0.00 0.00 3.27
300 614 2.165641 TGTGGACAGTCGTATCCATCAC 59.834 50.000 0.00 0.00 46.55 3.06
301 615 2.165641 GTGTGGACAGTCGTATCCATCA 59.834 50.000 0.00 0.00 46.55 3.07
310 624 2.310233 CGCCTTGTGTGGACAGTCG 61.310 63.158 0.00 0.00 32.26 4.18
330 644 2.545113 GCGCGATTATGAAGGTCCTGTA 60.545 50.000 12.10 0.00 0.00 2.74
332 646 0.861837 GCGCGATTATGAAGGTCCTG 59.138 55.000 12.10 0.00 0.00 3.86
333 647 0.597637 CGCGCGATTATGAAGGTCCT 60.598 55.000 28.94 0.00 0.00 3.85
334 648 1.853319 CGCGCGATTATGAAGGTCC 59.147 57.895 28.94 0.00 0.00 4.46
346 660 4.703799 TAAGACAACGGCGCGCGA 62.704 61.111 37.18 4.89 0.00 5.87
347 661 4.191485 CTAAGACAACGGCGCGCG 62.191 66.667 28.44 28.44 0.00 6.86
348 662 2.789203 CTCTAAGACAACGGCGCGC 61.789 63.158 25.94 25.94 0.00 6.86
350 664 0.171903 TACCTCTAAGACAACGGCGC 59.828 55.000 6.90 0.00 0.00 6.53
351 665 2.642139 TTACCTCTAAGACAACGGCG 57.358 50.000 4.80 4.80 0.00 6.46
353 667 4.261578 TGGTTTACCTCTAAGACAACGG 57.738 45.455 0.00 0.00 36.82 4.44
354 668 4.450080 GGTTGGTTTACCTCTAAGACAACG 59.550 45.833 0.00 0.00 34.41 4.10
356 670 4.503643 CCGGTTGGTTTACCTCTAAGACAA 60.504 45.833 0.00 0.00 35.97 3.18
358 672 3.593096 CCGGTTGGTTTACCTCTAAGAC 58.407 50.000 0.00 0.00 35.97 3.01
372 686 1.065709 ACCTTGTGCTATACCGGTTGG 60.066 52.381 15.04 4.40 42.84 3.77
373 687 2.006888 CACCTTGTGCTATACCGGTTG 58.993 52.381 15.04 4.82 31.90 3.77
375 689 0.539986 CCACCTTGTGCTATACCGGT 59.460 55.000 13.98 13.98 33.79 5.28
377 691 1.480954 AGACCACCTTGTGCTATACCG 59.519 52.381 0.00 0.00 31.34 4.02
378 692 2.158943 GGAGACCACCTTGTGCTATACC 60.159 54.545 0.00 0.00 31.34 2.73
379 693 2.500098 TGGAGACCACCTTGTGCTATAC 59.500 50.000 0.00 0.00 31.34 1.47
380 694 2.827755 TGGAGACCACCTTGTGCTATA 58.172 47.619 0.00 0.00 31.34 1.31
383 697 0.326264 GATGGAGACCACCTTGTGCT 59.674 55.000 0.00 0.00 35.80 4.40
385 699 0.692476 TGGATGGAGACCACCTTGTG 59.308 55.000 0.00 0.00 35.80 3.33
386 700 0.987294 CTGGATGGAGACCACCTTGT 59.013 55.000 0.00 0.00 35.80 3.16
387 701 0.987294 ACTGGATGGAGACCACCTTG 59.013 55.000 0.00 0.00 35.80 3.61
389 703 2.572104 GTTTACTGGATGGAGACCACCT 59.428 50.000 0.00 0.00 35.80 4.00
390 704 2.304761 TGTTTACTGGATGGAGACCACC 59.695 50.000 0.00 0.00 35.80 4.61
391 705 3.008049 AGTGTTTACTGGATGGAGACCAC 59.992 47.826 0.00 0.00 33.78 4.16
392 706 3.248024 AGTGTTTACTGGATGGAGACCA 58.752 45.455 0.00 0.00 34.94 4.02
393 707 3.983044 AGTGTTTACTGGATGGAGACC 57.017 47.619 0.00 0.00 35.34 3.85
394 708 4.894784 TCAAGTGTTTACTGGATGGAGAC 58.105 43.478 0.00 0.00 37.19 3.36
395 709 4.020218 CCTCAAGTGTTTACTGGATGGAGA 60.020 45.833 0.00 0.00 36.30 3.71
397 711 3.650942 ACCTCAAGTGTTTACTGGATGGA 59.349 43.478 0.00 0.00 36.30 3.41
399 713 4.625742 CGTACCTCAAGTGTTTACTGGATG 59.374 45.833 0.00 0.00 36.30 3.51
400 714 4.282703 ACGTACCTCAAGTGTTTACTGGAT 59.717 41.667 0.00 0.00 36.30 3.41
402 716 3.985925 GACGTACCTCAAGTGTTTACTGG 59.014 47.826 0.00 0.00 37.19 4.00
404 718 3.854784 GCGACGTACCTCAAGTGTTTACT 60.855 47.826 0.00 0.00 39.32 2.24
405 719 2.406357 GCGACGTACCTCAAGTGTTTAC 59.594 50.000 0.00 0.00 0.00 2.01
407 721 1.494824 GCGACGTACCTCAAGTGTTT 58.505 50.000 0.00 0.00 0.00 2.83
408 722 0.662374 CGCGACGTACCTCAAGTGTT 60.662 55.000 0.00 0.00 0.00 3.32
409 723 1.081641 CGCGACGTACCTCAAGTGT 60.082 57.895 0.00 0.00 0.00 3.55
410 724 1.063951 GACGCGACGTACCTCAAGTG 61.064 60.000 15.93 0.00 41.37 3.16
411 725 1.208614 GACGCGACGTACCTCAAGT 59.791 57.895 15.93 0.00 41.37 3.16
412 726 0.520827 GAGACGCGACGTACCTCAAG 60.521 60.000 15.93 0.00 41.37 3.02
413 727 1.499056 GAGACGCGACGTACCTCAA 59.501 57.895 15.93 0.00 41.37 3.02
414 728 2.393768 GGAGACGCGACGTACCTCA 61.394 63.158 15.93 0.00 41.37 3.86
415 729 1.712977 ATGGAGACGCGACGTACCTC 61.713 60.000 15.93 8.80 41.37 3.85
416 730 1.712977 GATGGAGACGCGACGTACCT 61.713 60.000 15.93 0.00 41.37 3.08
417 731 1.298190 GATGGAGACGCGACGTACC 60.298 63.158 15.93 13.89 41.37 3.34
419 733 1.712018 CTGGATGGAGACGCGACGTA 61.712 60.000 15.93 0.00 41.37 3.57
420 734 3.052620 CTGGATGGAGACGCGACGT 62.053 63.158 15.93 4.60 45.10 4.34
421 735 1.712018 TACTGGATGGAGACGCGACG 61.712 60.000 15.93 0.00 0.00 5.12
422 736 0.454600 TTACTGGATGGAGACGCGAC 59.545 55.000 15.93 6.86 0.00 5.19
423 737 1.135199 GTTTACTGGATGGAGACGCGA 60.135 52.381 15.93 0.00 0.00 5.87
424 738 1.278238 GTTTACTGGATGGAGACGCG 58.722 55.000 3.53 3.53 0.00 6.01
425 739 2.000447 GTGTTTACTGGATGGAGACGC 59.000 52.381 0.00 0.00 0.00 5.19
426 740 2.259618 CGTGTTTACTGGATGGAGACG 58.740 52.381 0.00 0.00 0.00 4.18
427 741 2.000447 GCGTGTTTACTGGATGGAGAC 59.000 52.381 0.00 0.00 0.00 3.36
428 742 1.621317 TGCGTGTTTACTGGATGGAGA 59.379 47.619 0.00 0.00 0.00 3.71
429 743 1.732259 GTGCGTGTTTACTGGATGGAG 59.268 52.381 0.00 0.00 0.00 3.86
432 746 0.802494 GGGTGCGTGTTTACTGGATG 59.198 55.000 0.00 0.00 0.00 3.51
434 748 0.470766 AAGGGTGCGTGTTTACTGGA 59.529 50.000 0.00 0.00 0.00 3.86
435 749 0.872388 GAAGGGTGCGTGTTTACTGG 59.128 55.000 0.00 0.00 0.00 4.00
436 750 1.263217 GTGAAGGGTGCGTGTTTACTG 59.737 52.381 0.00 0.00 0.00 2.74
437 751 1.134340 TGTGAAGGGTGCGTGTTTACT 60.134 47.619 0.00 0.00 0.00 2.24
438 752 1.301423 TGTGAAGGGTGCGTGTTTAC 58.699 50.000 0.00 0.00 0.00 2.01
439 753 1.876799 CATGTGAAGGGTGCGTGTTTA 59.123 47.619 0.00 0.00 0.00 2.01
440 754 0.667993 CATGTGAAGGGTGCGTGTTT 59.332 50.000 0.00 0.00 0.00 2.83
442 756 1.600636 CCATGTGAAGGGTGCGTGT 60.601 57.895 0.00 0.00 0.00 4.49
443 757 1.172180 AACCATGTGAAGGGTGCGTG 61.172 55.000 0.00 0.00 37.50 5.34
445 759 1.529226 TTAACCATGTGAAGGGTGCG 58.471 50.000 0.00 0.00 37.50 5.34
446 760 5.185056 ACTTAATTAACCATGTGAAGGGTGC 59.815 40.000 0.00 0.00 37.50 5.01
448 762 5.185056 GCACTTAATTAACCATGTGAAGGGT 59.815 40.000 15.69 0.00 39.65 4.34
449 763 5.184864 TGCACTTAATTAACCATGTGAAGGG 59.815 40.000 15.69 0.00 0.00 3.95
450 764 6.266168 TGCACTTAATTAACCATGTGAAGG 57.734 37.500 15.69 0.00 0.00 3.46
451 765 6.150976 TCCTGCACTTAATTAACCATGTGAAG 59.849 38.462 15.69 14.33 32.49 3.02
453 767 5.414454 GTCCTGCACTTAATTAACCATGTGA 59.586 40.000 15.69 4.50 0.00 3.58
454 768 5.182950 TGTCCTGCACTTAATTAACCATGTG 59.817 40.000 9.74 9.74 0.00 3.21
456 770 5.895636 TGTCCTGCACTTAATTAACCATG 57.104 39.130 0.00 0.00 0.00 3.66
457 771 5.105756 GCTTGTCCTGCACTTAATTAACCAT 60.106 40.000 0.00 0.00 0.00 3.55
458 772 4.217550 GCTTGTCCTGCACTTAATTAACCA 59.782 41.667 0.00 0.00 0.00 3.67
459 773 4.217550 TGCTTGTCCTGCACTTAATTAACC 59.782 41.667 0.00 0.00 35.31 2.85
460 774 5.048713 ACTGCTTGTCCTGCACTTAATTAAC 60.049 40.000 0.00 0.00 36.37 2.01
461 775 5.048782 CACTGCTTGTCCTGCACTTAATTAA 60.049 40.000 0.00 0.00 36.37 1.40
463 777 3.254166 CACTGCTTGTCCTGCACTTAATT 59.746 43.478 0.00 0.00 36.37 1.40
464 778 2.816087 CACTGCTTGTCCTGCACTTAAT 59.184 45.455 0.00 0.00 36.37 1.40
466 780 1.140852 ACACTGCTTGTCCTGCACTTA 59.859 47.619 0.00 0.00 36.37 2.24
468 782 0.107017 AACACTGCTTGTCCTGCACT 60.107 50.000 0.00 0.00 37.51 4.40
469 783 1.532868 CTAACACTGCTTGTCCTGCAC 59.467 52.381 0.00 0.00 37.51 4.57
471 785 0.519077 GCTAACACTGCTTGTCCTGC 59.481 55.000 0.00 0.00 37.51 4.85
472 786 1.532868 GTGCTAACACTGCTTGTCCTG 59.467 52.381 0.00 0.00 43.85 3.86
473 787 1.884235 GTGCTAACACTGCTTGTCCT 58.116 50.000 0.00 0.00 43.85 3.85
484 798 8.840833 TTATTTACTCATGACAAGTGCTAACA 57.159 30.769 0.00 0.00 0.00 2.41
488 802 9.236006 AGAATTTATTTACTCATGACAAGTGCT 57.764 29.630 0.00 0.00 0.00 4.40
489 803 9.846248 AAGAATTTATTTACTCATGACAAGTGC 57.154 29.630 0.00 0.00 0.00 4.40
505 819 8.523658 GCAGAAACCTGACCTAAAGAATTTATT 58.476 33.333 0.00 0.00 35.43 1.40
506 820 7.669722 TGCAGAAACCTGACCTAAAGAATTTAT 59.330 33.333 0.00 0.00 35.43 1.40
507 821 7.001674 TGCAGAAACCTGACCTAAAGAATTTA 58.998 34.615 0.00 0.00 35.07 1.40
508 822 5.833131 TGCAGAAACCTGACCTAAAGAATTT 59.167 36.000 0.00 0.00 36.57 1.82
509 823 5.385198 TGCAGAAACCTGACCTAAAGAATT 58.615 37.500 0.00 0.00 33.56 2.17
510 824 4.985538 TGCAGAAACCTGACCTAAAGAAT 58.014 39.130 0.00 0.00 33.56 2.40
511 825 4.431416 TGCAGAAACCTGACCTAAAGAA 57.569 40.909 0.00 0.00 33.56 2.52
512 826 4.431416 TTGCAGAAACCTGACCTAAAGA 57.569 40.909 0.00 0.00 33.56 2.52
513 827 5.705441 TGTATTGCAGAAACCTGACCTAAAG 59.295 40.000 0.00 0.00 33.56 1.85
514 828 5.626142 TGTATTGCAGAAACCTGACCTAAA 58.374 37.500 0.00 0.00 33.56 1.85
515 829 5.235850 TGTATTGCAGAAACCTGACCTAA 57.764 39.130 0.00 0.00 33.56 2.69
516 830 4.901197 TGTATTGCAGAAACCTGACCTA 57.099 40.909 0.00 0.00 33.56 3.08
517 831 3.788227 TGTATTGCAGAAACCTGACCT 57.212 42.857 0.00 0.00 33.56 3.85
518 832 4.846779 TTTGTATTGCAGAAACCTGACC 57.153 40.909 0.00 0.00 33.56 4.02
519 833 5.587289 TGTTTTGTATTGCAGAAACCTGAC 58.413 37.500 0.00 0.00 33.56 3.51
520 834 5.359576 ACTGTTTTGTATTGCAGAAACCTGA 59.640 36.000 0.00 0.00 33.56 3.86
521 835 5.459762 CACTGTTTTGTATTGCAGAAACCTG 59.540 40.000 0.00 0.00 32.40 4.00
522 836 5.591099 CACTGTTTTGTATTGCAGAAACCT 58.409 37.500 0.00 0.00 32.40 3.50
523 837 4.209080 GCACTGTTTTGTATTGCAGAAACC 59.791 41.667 0.00 0.00 32.40 3.27
524 838 4.209080 GGCACTGTTTTGTATTGCAGAAAC 59.791 41.667 0.00 0.00 34.76 2.78
525 839 4.142071 TGGCACTGTTTTGTATTGCAGAAA 60.142 37.500 0.00 0.00 34.76 2.52
526 840 3.382865 TGGCACTGTTTTGTATTGCAGAA 59.617 39.130 0.00 0.00 34.76 3.02
527 841 2.954989 TGGCACTGTTTTGTATTGCAGA 59.045 40.909 0.00 0.00 34.76 4.26
528 842 3.311106 CTGGCACTGTTTTGTATTGCAG 58.689 45.455 0.00 0.00 34.76 4.41
529 843 2.545532 GCTGGCACTGTTTTGTATTGCA 60.546 45.455 0.00 0.00 34.76 4.08
530 844 2.061028 GCTGGCACTGTTTTGTATTGC 58.939 47.619 0.00 0.00 0.00 3.56
531 845 3.004629 TCTGCTGGCACTGTTTTGTATTG 59.995 43.478 0.00 0.00 0.00 1.90
532 846 3.221771 TCTGCTGGCACTGTTTTGTATT 58.778 40.909 0.00 0.00 0.00 1.89
533 847 2.816087 CTCTGCTGGCACTGTTTTGTAT 59.184 45.455 0.00 0.00 0.00 2.29
534 848 2.221169 CTCTGCTGGCACTGTTTTGTA 58.779 47.619 0.00 0.00 0.00 2.41
535 849 1.027357 CTCTGCTGGCACTGTTTTGT 58.973 50.000 0.00 0.00 0.00 2.83
536 850 0.318445 GCTCTGCTGGCACTGTTTTG 60.318 55.000 0.00 0.00 0.00 2.44
537 851 0.752743 TGCTCTGCTGGCACTGTTTT 60.753 50.000 3.29 0.00 34.56 2.43
538 852 1.152902 TGCTCTGCTGGCACTGTTT 60.153 52.632 3.29 0.00 34.56 2.83
539 853 2.512397 TGCTCTGCTGGCACTGTT 59.488 55.556 3.29 0.00 34.56 3.16
544 858 2.281970 CCAAGTGCTCTGCTGGCA 60.282 61.111 3.29 3.29 37.36 4.92
545 859 2.282040 ACCAAGTGCTCTGCTGGC 60.282 61.111 6.44 0.00 0.00 4.85
546 860 0.535780 TTCACCAAGTGCTCTGCTGG 60.536 55.000 5.19 5.19 32.98 4.85
547 861 1.199327 CATTCACCAAGTGCTCTGCTG 59.801 52.381 0.00 0.00 32.98 4.41
548 862 1.531423 CATTCACCAAGTGCTCTGCT 58.469 50.000 0.00 0.00 32.98 4.24
549 863 0.524862 CCATTCACCAAGTGCTCTGC 59.475 55.000 0.00 0.00 32.98 4.26
550 864 2.189594 TCCATTCACCAAGTGCTCTG 57.810 50.000 0.00 0.00 32.98 3.35
551 865 2.107204 ACTTCCATTCACCAAGTGCTCT 59.893 45.455 0.00 0.00 32.98 4.09
552 866 2.485814 GACTTCCATTCACCAAGTGCTC 59.514 50.000 0.00 0.00 32.98 4.26
553 867 2.158623 TGACTTCCATTCACCAAGTGCT 60.159 45.455 0.00 0.00 32.98 4.40
554 868 2.229792 TGACTTCCATTCACCAAGTGC 58.770 47.619 0.00 0.00 32.98 4.40
555 869 3.885297 ACTTGACTTCCATTCACCAAGTG 59.115 43.478 0.00 0.00 41.52 3.16
556 870 4.137543 GACTTGACTTCCATTCACCAAGT 58.862 43.478 0.00 0.00 44.47 3.16
557 871 4.136796 TGACTTGACTTCCATTCACCAAG 58.863 43.478 0.00 0.00 37.57 3.61
558 872 4.136796 CTGACTTGACTTCCATTCACCAA 58.863 43.478 0.00 0.00 0.00 3.67
559 873 3.390967 TCTGACTTGACTTCCATTCACCA 59.609 43.478 0.00 0.00 0.00 4.17
560 874 3.748568 GTCTGACTTGACTTCCATTCACC 59.251 47.826 0.00 0.00 34.39 4.02
561 875 4.212214 GTGTCTGACTTGACTTCCATTCAC 59.788 45.833 9.51 0.00 37.79 3.18
562 876 4.101585 AGTGTCTGACTTGACTTCCATTCA 59.898 41.667 9.51 0.00 37.79 2.57
563 877 4.636249 AGTGTCTGACTTGACTTCCATTC 58.364 43.478 9.51 0.00 37.79 2.67
564 878 4.696479 AGTGTCTGACTTGACTTCCATT 57.304 40.909 9.51 0.00 37.79 3.16
565 879 4.696479 AAGTGTCTGACTTGACTTCCAT 57.304 40.909 9.51 0.00 43.71 3.41
574 888 1.000955 CTACCGGCAAGTGTCTGACTT 59.999 52.381 0.00 0.00 46.52 3.01
575 889 0.603569 CTACCGGCAAGTGTCTGACT 59.396 55.000 0.00 0.00 35.94 3.41
576 890 0.389948 CCTACCGGCAAGTGTCTGAC 60.390 60.000 0.00 0.00 0.00 3.51
577 891 1.972198 CCTACCGGCAAGTGTCTGA 59.028 57.895 0.00 0.00 0.00 3.27
578 892 4.598257 CCTACCGGCAAGTGTCTG 57.402 61.111 0.00 0.00 0.00 3.51
596 910 1.802636 CATTAGGTGCGGCCAACTG 59.197 57.895 2.24 0.00 39.90 3.16
597 911 2.046285 GCATTAGGTGCGGCCAACT 61.046 57.895 2.24 0.00 45.23 3.16
598 912 2.489751 GCATTAGGTGCGGCCAAC 59.510 61.111 2.24 0.00 45.23 3.77
606 920 1.466167 GTGTGTCTGCAGCATTAGGTG 59.534 52.381 9.47 0.00 45.83 4.00
607 921 1.813513 GTGTGTCTGCAGCATTAGGT 58.186 50.000 9.47 0.00 0.00 3.08
608 922 0.723414 CGTGTGTCTGCAGCATTAGG 59.277 55.000 9.47 6.32 0.00 2.69
609 923 1.713597 TCGTGTGTCTGCAGCATTAG 58.286 50.000 9.47 6.18 0.00 1.73
610 924 2.162319 TTCGTGTGTCTGCAGCATTA 57.838 45.000 9.47 1.82 0.00 1.90
611 925 1.466167 GATTCGTGTGTCTGCAGCATT 59.534 47.619 9.47 0.00 0.00 3.56
612 926 1.081892 GATTCGTGTGTCTGCAGCAT 58.918 50.000 9.47 0.00 0.00 3.79
613 927 0.249826 TGATTCGTGTGTCTGCAGCA 60.250 50.000 9.47 7.85 0.00 4.41
614 928 0.867746 TTGATTCGTGTGTCTGCAGC 59.132 50.000 9.47 4.92 0.00 5.25
615 929 2.287644 TGTTTGATTCGTGTGTCTGCAG 59.712 45.455 7.63 7.63 0.00 4.41
616 930 2.284190 TGTTTGATTCGTGTGTCTGCA 58.716 42.857 0.00 0.00 0.00 4.41
617 931 2.908634 CTGTTTGATTCGTGTGTCTGC 58.091 47.619 0.00 0.00 0.00 4.26
618 932 2.349817 GGCTGTTTGATTCGTGTGTCTG 60.350 50.000 0.00 0.00 0.00 3.51
619 933 1.873591 GGCTGTTTGATTCGTGTGTCT 59.126 47.619 0.00 0.00 0.00 3.41
620 934 1.601903 TGGCTGTTTGATTCGTGTGTC 59.398 47.619 0.00 0.00 0.00 3.67
621 935 1.674359 TGGCTGTTTGATTCGTGTGT 58.326 45.000 0.00 0.00 0.00 3.72
622 936 2.772568 TTGGCTGTTTGATTCGTGTG 57.227 45.000 0.00 0.00 0.00 3.82
623 937 3.149196 AGATTGGCTGTTTGATTCGTGT 58.851 40.909 0.00 0.00 0.00 4.49
624 938 3.837213 AGATTGGCTGTTTGATTCGTG 57.163 42.857 0.00 0.00 0.00 4.35
625 939 3.370978 CGTAGATTGGCTGTTTGATTCGT 59.629 43.478 0.00 0.00 0.00 3.85
626 940 3.242413 CCGTAGATTGGCTGTTTGATTCG 60.242 47.826 0.00 0.00 0.00 3.34
627 941 3.938963 TCCGTAGATTGGCTGTTTGATTC 59.061 43.478 0.00 0.00 0.00 2.52
628 942 3.950397 TCCGTAGATTGGCTGTTTGATT 58.050 40.909 0.00 0.00 0.00 2.57
629 943 3.627395 TCCGTAGATTGGCTGTTTGAT 57.373 42.857 0.00 0.00 0.00 2.57
630 944 3.410631 TTCCGTAGATTGGCTGTTTGA 57.589 42.857 0.00 0.00 0.00 2.69
631 945 5.116180 TCTATTCCGTAGATTGGCTGTTTG 58.884 41.667 0.00 0.00 34.50 2.93
632 946 5.353394 TCTATTCCGTAGATTGGCTGTTT 57.647 39.130 0.00 0.00 34.50 2.83
633 947 5.300752 CATCTATTCCGTAGATTGGCTGTT 58.699 41.667 0.00 0.00 45.78 3.16
634 948 4.800914 GCATCTATTCCGTAGATTGGCTGT 60.801 45.833 0.00 0.00 45.78 4.40
635 949 3.681897 GCATCTATTCCGTAGATTGGCTG 59.318 47.826 0.00 0.00 45.78 4.85
636 950 3.615110 CGCATCTATTCCGTAGATTGGCT 60.615 47.826 0.00 0.00 45.78 4.75
637 951 2.668457 CGCATCTATTCCGTAGATTGGC 59.332 50.000 0.00 0.00 45.78 4.52
638 952 3.914312 ACGCATCTATTCCGTAGATTGG 58.086 45.455 0.00 0.00 45.78 3.16
639 953 7.432545 CCTAATACGCATCTATTCCGTAGATTG 59.567 40.741 0.00 0.00 45.78 2.67
640 954 7.338703 TCCTAATACGCATCTATTCCGTAGATT 59.661 37.037 0.00 0.00 45.78 2.40
642 956 6.175471 TCCTAATACGCATCTATTCCGTAGA 58.825 40.000 0.00 0.00 43.35 2.59
643 957 6.432607 TCCTAATACGCATCTATTCCGTAG 57.567 41.667 0.00 0.00 40.26 3.51
644 958 6.238293 CGATCCTAATACGCATCTATTCCGTA 60.238 42.308 0.00 0.00 41.04 4.02
645 959 5.448768 CGATCCTAATACGCATCTATTCCGT 60.449 44.000 0.00 0.00 38.84 4.69
646 960 4.970611 CGATCCTAATACGCATCTATTCCG 59.029 45.833 0.00 0.00 0.00 4.30
647 961 5.282510 CCGATCCTAATACGCATCTATTCC 58.717 45.833 0.00 0.00 0.00 3.01
648 962 4.740695 GCCGATCCTAATACGCATCTATTC 59.259 45.833 0.00 0.00 0.00 1.75
649 963 4.159693 TGCCGATCCTAATACGCATCTATT 59.840 41.667 0.00 0.00 0.00 1.73
650 964 3.699538 TGCCGATCCTAATACGCATCTAT 59.300 43.478 0.00 0.00 0.00 1.98
651 965 3.086282 TGCCGATCCTAATACGCATCTA 58.914 45.455 0.00 0.00 0.00 1.98
652 966 1.893137 TGCCGATCCTAATACGCATCT 59.107 47.619 0.00 0.00 0.00 2.90
653 967 2.363788 TGCCGATCCTAATACGCATC 57.636 50.000 0.00 0.00 0.00 3.91
654 968 3.055819 AGAATGCCGATCCTAATACGCAT 60.056 43.478 0.00 0.00 0.00 4.73
655 969 2.299013 AGAATGCCGATCCTAATACGCA 59.701 45.455 0.00 0.00 0.00 5.24
656 970 2.668457 CAGAATGCCGATCCTAATACGC 59.332 50.000 0.00 0.00 0.00 4.42
657 971 4.174411 TCAGAATGCCGATCCTAATACG 57.826 45.455 0.00 0.00 34.76 3.06
658 972 7.389053 AGAAATTCAGAATGCCGATCCTAATAC 59.611 37.037 0.00 0.00 34.76 1.89
659 973 7.453393 AGAAATTCAGAATGCCGATCCTAATA 58.547 34.615 0.00 0.00 34.76 0.98
660 974 6.302269 AGAAATTCAGAATGCCGATCCTAAT 58.698 36.000 0.00 0.00 34.76 1.73
661 975 5.684704 AGAAATTCAGAATGCCGATCCTAA 58.315 37.500 0.00 0.00 34.76 2.69
662 976 5.296151 AGAAATTCAGAATGCCGATCCTA 57.704 39.130 0.00 0.00 34.76 2.94
663 977 4.162040 AGAAATTCAGAATGCCGATCCT 57.838 40.909 0.00 0.00 34.76 3.24
664 978 4.907879 AAGAAATTCAGAATGCCGATCC 57.092 40.909 0.00 0.00 34.76 3.36
665 979 6.416161 GCTAAAAGAAATTCAGAATGCCGATC 59.584 38.462 0.00 0.00 34.76 3.69
666 980 6.268566 GCTAAAAGAAATTCAGAATGCCGAT 58.731 36.000 0.00 0.00 34.76 4.18
667 981 5.640732 GCTAAAAGAAATTCAGAATGCCGA 58.359 37.500 0.00 0.00 34.76 5.54
668 982 4.496895 CGCTAAAAGAAATTCAGAATGCCG 59.503 41.667 0.00 0.00 34.76 5.69
669 983 5.513141 GTCGCTAAAAGAAATTCAGAATGCC 59.487 40.000 0.00 0.00 34.76 4.40
670 984 5.513141 GGTCGCTAAAAGAAATTCAGAATGC 59.487 40.000 0.00 0.00 34.76 3.56
671 985 5.734498 CGGTCGCTAAAAGAAATTCAGAATG 59.266 40.000 0.00 0.00 37.54 2.67
672 986 5.642063 TCGGTCGCTAAAAGAAATTCAGAAT 59.358 36.000 0.00 0.00 0.00 2.40
673 987 4.992319 TCGGTCGCTAAAAGAAATTCAGAA 59.008 37.500 0.00 0.00 0.00 3.02
674 988 4.562082 TCGGTCGCTAAAAGAAATTCAGA 58.438 39.130 0.00 0.00 0.00 3.27
675 989 4.921470 TCGGTCGCTAAAAGAAATTCAG 57.079 40.909 0.00 0.00 0.00 3.02
676 990 5.676532 TTTCGGTCGCTAAAAGAAATTCA 57.323 34.783 0.00 0.00 0.00 2.57
677 991 5.910723 TGTTTTCGGTCGCTAAAAGAAATTC 59.089 36.000 0.00 0.00 31.94 2.17
678 992 5.823353 TGTTTTCGGTCGCTAAAAGAAATT 58.177 33.333 0.00 0.00 31.94 1.82
679 993 5.427036 TGTTTTCGGTCGCTAAAAGAAAT 57.573 34.783 0.00 0.00 31.94 2.17
680 994 4.787245 GCTGTTTTCGGTCGCTAAAAGAAA 60.787 41.667 0.00 0.00 0.00 2.52
681 995 3.303526 GCTGTTTTCGGTCGCTAAAAGAA 60.304 43.478 0.00 0.00 0.00 2.52
682 996 2.222445 GCTGTTTTCGGTCGCTAAAAGA 59.778 45.455 0.00 0.00 0.00 2.52
683 997 2.571206 GCTGTTTTCGGTCGCTAAAAG 58.429 47.619 0.00 0.00 0.00 2.27
684 998 1.264826 GGCTGTTTTCGGTCGCTAAAA 59.735 47.619 0.00 0.00 0.00 1.52
685 999 0.869730 GGCTGTTTTCGGTCGCTAAA 59.130 50.000 0.00 0.00 0.00 1.85
686 1000 0.249953 TGGCTGTTTTCGGTCGCTAA 60.250 50.000 0.00 0.00 32.70 3.09
687 1001 0.947180 GTGGCTGTTTTCGGTCGCTA 60.947 55.000 0.00 0.00 38.18 4.26
688 1002 2.110213 TGGCTGTTTTCGGTCGCT 59.890 55.556 0.00 0.00 32.70 4.93
689 1003 2.251371 GTGGCTGTTTTCGGTCGC 59.749 61.111 0.00 0.00 34.11 5.19
690 1004 2.549282 CGTGGCTGTTTTCGGTCG 59.451 61.111 0.00 0.00 32.70 4.79
691 1005 2.054140 TTGCGTGGCTGTTTTCGGTC 62.054 55.000 0.00 0.00 0.00 4.79
692 1006 2.058829 CTTGCGTGGCTGTTTTCGGT 62.059 55.000 0.00 0.00 0.00 4.69
693 1007 1.370414 CTTGCGTGGCTGTTTTCGG 60.370 57.895 0.00 0.00 0.00 4.30
694 1008 1.370414 CCTTGCGTGGCTGTTTTCG 60.370 57.895 0.00 0.00 0.00 3.46
695 1009 1.007387 CCCTTGCGTGGCTGTTTTC 60.007 57.895 0.00 0.00 0.00 2.29
696 1010 2.498056 CCCCTTGCGTGGCTGTTTT 61.498 57.895 0.00 0.00 0.00 2.43
697 1011 2.912025 CCCCTTGCGTGGCTGTTT 60.912 61.111 0.00 0.00 0.00 2.83
698 1012 3.429372 TTCCCCTTGCGTGGCTGTT 62.429 57.895 0.00 0.00 0.00 3.16
699 1013 3.850098 CTTCCCCTTGCGTGGCTGT 62.850 63.158 0.00 0.00 0.00 4.40
700 1014 3.058160 CTTCCCCTTGCGTGGCTG 61.058 66.667 0.00 0.00 0.00 4.85
701 1015 4.351054 CCTTCCCCTTGCGTGGCT 62.351 66.667 0.00 0.00 0.00 4.75
703 1017 4.659172 TGCCTTCCCCTTGCGTGG 62.659 66.667 0.00 0.00 0.00 4.94
704 1018 3.365265 GTGCCTTCCCCTTGCGTG 61.365 66.667 0.00 0.00 0.00 5.34
705 1019 3.850098 CTGTGCCTTCCCCTTGCGT 62.850 63.158 0.00 0.00 0.00 5.24
706 1020 2.826777 ATCTGTGCCTTCCCCTTGCG 62.827 60.000 0.00 0.00 0.00 4.85
707 1021 1.000396 ATCTGTGCCTTCCCCTTGC 60.000 57.895 0.00 0.00 0.00 4.01
708 1022 0.682209 CCATCTGTGCCTTCCCCTTG 60.682 60.000 0.00 0.00 0.00 3.61
709 1023 1.693640 CCATCTGTGCCTTCCCCTT 59.306 57.895 0.00 0.00 0.00 3.95
710 1024 2.311854 CCCATCTGTGCCTTCCCCT 61.312 63.158 0.00 0.00 0.00 4.79
711 1025 2.276740 CCCATCTGTGCCTTCCCC 59.723 66.667 0.00 0.00 0.00 4.81
712 1026 2.440980 GCCCATCTGTGCCTTCCC 60.441 66.667 0.00 0.00 0.00 3.97
713 1027 2.825836 CGCCCATCTGTGCCTTCC 60.826 66.667 0.00 0.00 0.00 3.46
714 1028 2.109126 GTCGCCCATCTGTGCCTTC 61.109 63.158 0.00 0.00 0.00 3.46
715 1029 2.045926 GTCGCCCATCTGTGCCTT 60.046 61.111 0.00 0.00 0.00 4.35
716 1030 3.321648 TGTCGCCCATCTGTGCCT 61.322 61.111 0.00 0.00 0.00 4.75
717 1031 3.127533 GTGTCGCCCATCTGTGCC 61.128 66.667 0.00 0.00 0.00 5.01
718 1032 3.490759 CGTGTCGCCCATCTGTGC 61.491 66.667 0.00 0.00 0.00 4.57
719 1033 2.048222 ACGTGTCGCCCATCTGTG 60.048 61.111 0.00 0.00 0.00 3.66
720 1034 2.048222 CACGTGTCGCCCATCTGT 60.048 61.111 7.58 0.00 0.00 3.41
721 1035 3.490759 GCACGTGTCGCCCATCTG 61.491 66.667 18.38 0.00 0.00 2.90
744 1058 3.631487 AAAATCTTGCCTGCGCCGC 62.631 57.895 4.18 0.00 0.00 6.53
745 1059 0.170116 TAAAAATCTTGCCTGCGCCG 59.830 50.000 4.18 0.00 0.00 6.46
746 1060 1.629013 GTAAAAATCTTGCCTGCGCC 58.371 50.000 4.18 0.00 0.00 6.53
747 1061 1.259316 CGTAAAAATCTTGCCTGCGC 58.741 50.000 0.00 0.00 0.00 6.09
748 1062 2.159627 AGACGTAAAAATCTTGCCTGCG 59.840 45.455 0.00 0.00 0.00 5.18
749 1063 3.058224 ACAGACGTAAAAATCTTGCCTGC 60.058 43.478 0.00 0.00 0.00 4.85
750 1064 4.749245 ACAGACGTAAAAATCTTGCCTG 57.251 40.909 0.00 0.00 0.00 4.85
751 1065 4.556699 GCAACAGACGTAAAAATCTTGCCT 60.557 41.667 0.00 0.00 0.00 4.75
752 1066 3.668656 GCAACAGACGTAAAAATCTTGCC 59.331 43.478 0.00 0.00 0.00 4.52
753 1067 3.668656 GGCAACAGACGTAAAAATCTTGC 59.331 43.478 0.00 0.00 30.93 4.01
754 1068 4.911610 CAGGCAACAGACGTAAAAATCTTG 59.088 41.667 0.00 0.00 41.41 3.02
755 1069 4.578928 ACAGGCAACAGACGTAAAAATCTT 59.421 37.500 0.00 0.00 41.41 2.40
756 1070 4.134563 ACAGGCAACAGACGTAAAAATCT 58.865 39.130 0.00 0.00 41.41 2.40
757 1071 4.483476 ACAGGCAACAGACGTAAAAATC 57.517 40.909 0.00 0.00 41.41 2.17
758 1072 4.336993 TGAACAGGCAACAGACGTAAAAAT 59.663 37.500 0.00 0.00 41.41 1.82
759 1073 3.690139 TGAACAGGCAACAGACGTAAAAA 59.310 39.130 0.00 0.00 41.41 1.94
760 1074 3.271729 TGAACAGGCAACAGACGTAAAA 58.728 40.909 0.00 0.00 41.41 1.52
761 1075 2.907634 TGAACAGGCAACAGACGTAAA 58.092 42.857 0.00 0.00 41.41 2.01
762 1076 2.605837 TGAACAGGCAACAGACGTAA 57.394 45.000 0.00 0.00 41.41 3.18
763 1077 2.605837 TTGAACAGGCAACAGACGTA 57.394 45.000 0.00 0.00 41.41 3.57
764 1078 1.400494 GTTTGAACAGGCAACAGACGT 59.600 47.619 0.00 0.00 41.41 4.34
765 1079 1.268539 GGTTTGAACAGGCAACAGACG 60.269 52.381 0.00 0.00 41.41 4.18
766 1080 1.067060 GGGTTTGAACAGGCAACAGAC 59.933 52.381 0.00 0.00 41.41 3.51
769 1083 1.398692 GAGGGTTTGAACAGGCAACA 58.601 50.000 0.00 0.00 41.41 3.33
775 1089 1.981495 AGAGAGGGAGGGTTTGAACAG 59.019 52.381 0.00 0.00 0.00 3.16
777 1091 3.510531 AAAGAGAGGGAGGGTTTGAAC 57.489 47.619 0.00 0.00 0.00 3.18
879 1197 1.069513 TGTGGACACCTTAGTCAACGG 59.930 52.381 0.00 0.00 43.88 4.44
880 1198 2.519377 TGTGGACACCTTAGTCAACG 57.481 50.000 0.00 0.00 43.88 4.10
1019 1341 0.667184 GTGGGCGTGCTTGGAAATTG 60.667 55.000 0.00 0.00 0.00 2.32
1020 1342 1.665442 GTGGGCGTGCTTGGAAATT 59.335 52.632 0.00 0.00 0.00 1.82
1022 1344 3.283684 CGTGGGCGTGCTTGGAAA 61.284 61.111 0.00 0.00 0.00 3.13
1025 1347 4.680237 TCTCGTGGGCGTGCTTGG 62.680 66.667 0.00 0.00 39.49 3.61
1026 1348 3.114616 CTCTCGTGGGCGTGCTTG 61.115 66.667 0.00 0.00 39.49 4.01
1027 1349 4.379243 CCTCTCGTGGGCGTGCTT 62.379 66.667 0.00 0.00 39.49 3.91
1030 1352 3.649277 CTTCCCTCTCGTGGGCGTG 62.649 68.421 6.13 0.00 46.67 5.34
1031 1353 3.382832 CTTCCCTCTCGTGGGCGT 61.383 66.667 6.13 0.00 46.67 5.68
1032 1354 4.821589 GCTTCCCTCTCGTGGGCG 62.822 72.222 6.13 0.00 46.67 6.13
1033 1355 2.543067 ATTGCTTCCCTCTCGTGGGC 62.543 60.000 6.13 0.00 46.67 5.36
1069 1421 0.108424 GGTAGTGCTGCTGGACTCAG 60.108 60.000 20.61 0.00 43.84 3.35
1079 1434 0.179134 GTAGCTCCACGGTAGTGCTG 60.179 60.000 12.28 0.00 46.62 4.41
1080 1435 1.321074 GGTAGCTCCACGGTAGTGCT 61.321 60.000 8.12 8.12 46.62 4.40
1081 1436 1.141234 GGTAGCTCCACGGTAGTGC 59.859 63.158 0.00 0.00 46.62 4.40
1089 1444 2.496817 CAGGCGAGGTAGCTCCAC 59.503 66.667 16.06 9.10 39.02 4.02
1120 1475 1.040646 CATAGGACTAGGAGCGCCAA 58.959 55.000 9.88 0.00 36.29 4.52
1127 1482 1.009060 TGGTTGGCCATAGGACTAGGA 59.991 52.381 6.09 0.00 40.46 2.94
1128 1483 1.507140 TGGTTGGCCATAGGACTAGG 58.493 55.000 6.09 0.00 40.46 3.02
1227 1582 0.179134 CGCCGAGGAGGAAACTGTAG 60.179 60.000 0.00 0.00 44.43 2.74
1323 1681 0.687354 AGAGGAAAGGCATGACGTGT 59.313 50.000 0.00 0.00 0.00 4.49
1354 1712 3.429141 CTGCTTGCCGTGCTCCTG 61.429 66.667 0.00 0.00 0.00 3.86
1602 1963 2.732282 GCTATCAAAAAGAGGCGCAACC 60.732 50.000 10.83 0.00 39.61 3.77
1604 1965 1.472480 GGCTATCAAAAAGAGGCGCAA 59.528 47.619 10.83 0.00 32.10 4.85
1624 1990 0.248054 GTCACACACTTGCCACAACG 60.248 55.000 0.00 0.00 0.00 4.10
1625 1991 1.094785 AGTCACACACTTGCCACAAC 58.905 50.000 0.00 0.00 26.56 3.32
1631 1997 2.480419 AGCGAATTAGTCACACACTTGC 59.520 45.455 0.00 0.00 36.43 4.01
1640 2006 4.694982 TCTGCAAATCAAGCGAATTAGTCA 59.305 37.500 0.00 0.00 33.85 3.41
1642 2008 5.355071 TGATCTGCAAATCAAGCGAATTAGT 59.645 36.000 0.00 0.00 32.80 2.24
1645 2011 4.707030 TGATCTGCAAATCAAGCGAATT 57.293 36.364 0.00 0.00 32.80 2.17
1647 2013 3.441222 ACATGATCTGCAAATCAAGCGAA 59.559 39.130 6.83 0.00 39.04 4.70
1674 2056 1.939934 TCACAACACAAAGAGAAGGCG 59.060 47.619 0.00 0.00 0.00 5.52
1764 2146 2.681778 CCGGTGAGGCTCTGGAGT 60.682 66.667 16.72 0.00 33.49 3.85
1845 2227 2.575993 CCGACCTGCTCAGACTGG 59.424 66.667 1.81 0.00 34.95 4.00
1996 5970 1.077357 ACAAAACACCTGGTCGGCA 60.077 52.632 0.00 0.00 35.61 5.69
1997 5971 1.358759 CACAAAACACCTGGTCGGC 59.641 57.895 0.00 0.00 35.61 5.54
2021 5995 3.239254 TGCGTTGTCAGTATACGAGTTG 58.761 45.455 0.00 0.00 37.47 3.16
2156 6269 2.953020 AGTCATCGTTTGTGCTCTCTC 58.047 47.619 0.00 0.00 0.00 3.20
2159 6272 4.238514 GAGTAAGTCATCGTTTGTGCTCT 58.761 43.478 0.00 0.00 0.00 4.09
2448 6565 3.433274 TGCAGCAACTCGAGTAATTTCAG 59.567 43.478 20.39 6.69 0.00 3.02
2480 6616 4.832590 AAGATACCGTACTTCTGATCCG 57.167 45.455 0.00 0.00 0.00 4.18
2613 6755 2.513897 GCCAGGCGGGTATGTGAC 60.514 66.667 5.36 0.00 39.65 3.67
2624 6766 1.019278 TCTCGAAAATCACGCCAGGC 61.019 55.000 0.00 0.00 0.00 4.85
2765 6907 4.418328 CGTGGCCCCCATCCGAAA 62.418 66.667 0.00 0.00 35.28 3.46
2879 7021 0.108089 TTACGGTATGTGGCGCATGT 60.108 50.000 23.12 14.64 38.47 3.21
2944 7086 7.925043 ATATGGTGATACTACTACGAAGAGG 57.075 40.000 0.00 0.00 0.00 3.69
2990 7134 8.675705 TGTAGAGTGAATCATTCTCAAAAACA 57.324 30.769 11.60 7.71 32.80 2.83
2991 7135 9.552114 CATGTAGAGTGAATCATTCTCAAAAAC 57.448 33.333 11.60 5.29 32.80 2.43
2993 7137 8.853077 ACATGTAGAGTGAATCATTCTCAAAA 57.147 30.769 11.60 0.00 32.80 2.44
2997 7141 9.926158 ATGATACATGTAGAGTGAATCATTCTC 57.074 33.333 11.60 2.23 32.80 2.87
3001 7145 9.597170 GCATATGATACATGTAGAGTGAATCAT 57.403 33.333 17.63 17.63 36.73 2.45
3003 7147 8.867935 GTGCATATGATACATGTAGAGTGAATC 58.132 37.037 11.91 3.78 0.00 2.52
3004 7148 8.591940 AGTGCATATGATACATGTAGAGTGAAT 58.408 33.333 11.91 0.00 0.00 2.57
3005 7149 7.955918 AGTGCATATGATACATGTAGAGTGAA 58.044 34.615 11.91 0.00 0.00 3.18
3006 7150 7.449704 AGAGTGCATATGATACATGTAGAGTGA 59.550 37.037 11.91 0.00 0.00 3.41
3007 7151 7.600960 AGAGTGCATATGATACATGTAGAGTG 58.399 38.462 11.91 6.88 0.00 3.51
3008 7152 7.773489 AGAGTGCATATGATACATGTAGAGT 57.227 36.000 11.91 2.20 0.00 3.24
3013 7157 9.433153 CAAGATAAGAGTGCATATGATACATGT 57.567 33.333 6.97 2.69 0.00 3.21
3014 7158 8.880750 CCAAGATAAGAGTGCATATGATACATG 58.119 37.037 6.97 0.00 0.00 3.21
3015 7159 7.551974 GCCAAGATAAGAGTGCATATGATACAT 59.448 37.037 6.97 0.00 0.00 2.29
3016 7160 6.875726 GCCAAGATAAGAGTGCATATGATACA 59.124 38.462 6.97 0.00 0.00 2.29
3017 7161 6.314896 GGCCAAGATAAGAGTGCATATGATAC 59.685 42.308 6.97 4.68 0.00 2.24
3018 7162 6.013466 TGGCCAAGATAAGAGTGCATATGATA 60.013 38.462 0.61 0.00 0.00 2.15
3019 7163 5.221986 TGGCCAAGATAAGAGTGCATATGAT 60.222 40.000 0.61 0.00 0.00 2.45
3020 7164 4.102996 TGGCCAAGATAAGAGTGCATATGA 59.897 41.667 0.61 0.00 0.00 2.15
3021 7165 4.392047 TGGCCAAGATAAGAGTGCATATG 58.608 43.478 0.61 0.00 0.00 1.78
3022 7166 4.712051 TGGCCAAGATAAGAGTGCATAT 57.288 40.909 0.61 0.00 0.00 1.78
3023 7167 4.141413 ACATGGCCAAGATAAGAGTGCATA 60.141 41.667 16.33 0.00 0.00 3.14
3024 7168 3.220110 CATGGCCAAGATAAGAGTGCAT 58.780 45.455 10.96 0.00 0.00 3.96
3025 7169 2.025981 ACATGGCCAAGATAAGAGTGCA 60.026 45.455 16.33 0.00 0.00 4.57
3026 7170 2.648059 ACATGGCCAAGATAAGAGTGC 58.352 47.619 16.33 0.00 0.00 4.40
3027 7171 6.757897 TTTTACATGGCCAAGATAAGAGTG 57.242 37.500 16.33 5.21 0.00 3.51
3059 7203 6.424207 GGACCTTTATTACGATAGAAGGCAAG 59.576 42.308 0.00 0.00 40.36 4.01
3069 7213 8.519799 AAATCATGTTGGACCTTTATTACGAT 57.480 30.769 0.00 0.00 0.00 3.73
3071 7215 8.342634 CCTAAATCATGTTGGACCTTTATTACG 58.657 37.037 0.00 0.00 0.00 3.18
3156 7303 2.224305 GCACAATACCTTCCTAGGCGAT 60.224 50.000 2.96 0.00 46.22 4.58
3157 7304 1.138266 GCACAATACCTTCCTAGGCGA 59.862 52.381 2.96 0.00 46.22 5.54
3199 7346 3.114616 CACTTGAGGAGCGCACCG 61.115 66.667 18.47 6.59 34.73 4.94
3209 7356 8.284945 TGGGAAATGATAAGAATTCACTTGAG 57.715 34.615 8.44 0.00 0.00 3.02
3221 7368 4.516698 CCGAAGTCCATGGGAAATGATAAG 59.483 45.833 13.02 0.00 31.38 1.73
3256 7403 2.294074 CCCAACAAGTTGTTCTCGGAA 58.706 47.619 18.34 0.00 38.77 4.30
3258 7405 0.310854 GCCCAACAAGTTGTTCTCGG 59.689 55.000 18.34 17.29 38.77 4.63
3294 7441 2.133641 GGGCTGCCAAACACACCTT 61.134 57.895 22.05 0.00 0.00 3.50
3387 7534 4.339530 GGGTTTTCTTCTTGCTTCACTTCT 59.660 41.667 0.00 0.00 0.00 2.85
3909 8066 0.798776 CAACATCCACGAGAGGCAAC 59.201 55.000 0.00 0.00 0.00 4.17
3918 8075 1.757574 CAACAGCAACAACATCCACG 58.242 50.000 0.00 0.00 0.00 4.94
3923 8080 1.363443 CCGGCAACAGCAACAACAT 59.637 52.632 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.