Multiple sequence alignment - TraesCS3D01G537300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G537300 chr3D 100.000 3919 0 0 1 3919 610432227 610428309 0.000000e+00 7238.0
1 TraesCS3D01G537300 chr3D 82.078 1049 136 36 2193 3220 610375812 610374795 0.000000e+00 848.0
2 TraesCS3D01G537300 chr3D 83.912 547 54 12 2204 2741 610420047 610419526 3.520000e-135 492.0
3 TraesCS3D01G537300 chr3D 81.280 422 72 4 3504 3919 610374559 610374139 6.270000e-88 335.0
4 TraesCS3D01G537300 chr3D 79.443 467 84 8 3460 3917 610391318 610390855 1.760000e-83 320.0
5 TraesCS3D01G537300 chr3D 77.193 399 52 23 1479 1845 517895388 517894997 3.090000e-46 196.0
6 TraesCS3D01G537300 chr3A 86.136 3527 260 105 425 3856 744666993 744663601 0.000000e+00 3592.0
7 TraesCS3D01G537300 chr3A 80.409 1174 166 40 2064 3220 744469353 744468227 0.000000e+00 835.0
8 TraesCS3D01G537300 chr3A 81.356 944 95 33 2200 3113 744614461 744613569 0.000000e+00 693.0
9 TraesCS3D01G537300 chr3A 80.523 421 74 5 3504 3918 744467991 744467573 2.270000e-82 316.0
10 TraesCS3D01G537300 chr3A 78.923 427 81 4 3498 3917 744478336 744477912 8.290000e-72 281.0
11 TraesCS3D01G537300 chr3A 78.750 400 44 24 1479 1845 653525731 653525340 3.050000e-56 230.0
12 TraesCS3D01G537300 chr3A 92.857 126 6 3 298 421 744667155 744667031 3.110000e-41 180.0
13 TraesCS3D01G537300 chr3A 93.182 44 2 1 261 303 596709808 596709851 3.270000e-06 63.9
14 TraesCS3D01G537300 chr1D 93.663 931 43 9 1154 2084 459697850 459696936 0.000000e+00 1378.0
15 TraesCS3D01G537300 chr1D 93.663 931 42 9 1154 2084 44743489 44744402 0.000000e+00 1376.0
16 TraesCS3D01G537300 chr1D 89.076 119 11 2 3208 3326 6539284 6539400 3.160000e-31 147.0
17 TraesCS3D01G537300 chr5D 93.469 934 39 12 1154 2084 430276349 430275435 0.000000e+00 1367.0
18 TraesCS3D01G537300 chr4B 83.659 1432 139 45 855 2250 543064402 543065774 0.000000e+00 1260.0
19 TraesCS3D01G537300 chr4B 91.950 559 38 5 2235 2787 543065801 543066358 0.000000e+00 776.0
20 TraesCS3D01G537300 chrUn 85.083 1267 123 35 1889 3142 43094287 43095500 0.000000e+00 1232.0
21 TraesCS3D01G537300 chrUn 85.083 1267 123 35 1889 3142 43260271 43259058 0.000000e+00 1232.0
22 TraesCS3D01G537300 chrUn 85.083 1267 123 35 1889 3142 262841143 262842356 0.000000e+00 1232.0
23 TraesCS3D01G537300 chrUn 85.083 1267 123 35 1889 3142 293233110 293234323 0.000000e+00 1232.0
24 TraesCS3D01G537300 chrUn 86.045 1168 94 23 600 1741 43093077 43094201 0.000000e+00 1190.0
25 TraesCS3D01G537300 chrUn 85.995 1171 95 23 600 1744 43261481 43260354 0.000000e+00 1190.0
26 TraesCS3D01G537300 chrUn 86.045 1168 94 23 600 1741 262839933 262841057 0.000000e+00 1190.0
27 TraesCS3D01G537300 chrUn 86.045 1168 94 23 600 1741 293231900 293233024 0.000000e+00 1190.0
28 TraesCS3D01G537300 chrUn 79.482 463 85 9 3460 3914 42860391 42860851 1.760000e-83 320.0
29 TraesCS3D01G537300 chrUn 81.250 256 30 9 178 421 43092730 43092979 1.440000e-44 191.0
30 TraesCS3D01G537300 chrUn 81.250 256 30 9 178 421 43261828 43261579 1.440000e-44 191.0
31 TraesCS3D01G537300 chrUn 81.250 256 30 9 178 421 262839586 262839835 1.440000e-44 191.0
32 TraesCS3D01G537300 chrUn 81.250 256 30 9 178 421 293231553 293231802 1.440000e-44 191.0
33 TraesCS3D01G537300 chr4A 83.981 1055 86 42 1129 2159 229713433 229714428 0.000000e+00 935.0
34 TraesCS3D01G537300 chr4A 84.336 964 68 42 1129 2068 220151473 220152377 0.000000e+00 867.0
35 TraesCS3D01G537300 chr4A 77.086 659 82 38 1337 1954 17983931 17983301 2.270000e-82 316.0
36 TraesCS3D01G537300 chr1A 83.459 1064 90 45 1122 2159 89966945 89965942 0.000000e+00 911.0
37 TraesCS3D01G537300 chr5A 74.631 745 124 34 1517 2237 496286609 496285906 6.450000e-68 268.0
38 TraesCS3D01G537300 chr5B 83.243 185 28 3 2054 2238 474318252 474318071 2.420000e-37 167.0
39 TraesCS3D01G537300 chr5B 91.743 109 9 0 3218 3326 366049433 366049541 6.780000e-33 152.0
40 TraesCS3D01G537300 chr3B 91.597 119 9 1 3215 3332 12407684 12407566 3.130000e-36 163.0
41 TraesCS3D01G537300 chr7B 93.519 108 7 0 3217 3324 428829539 428829432 1.130000e-35 161.0
42 TraesCS3D01G537300 chr6B 92.105 114 8 1 3212 3324 583445974 583446087 4.050000e-35 159.0
43 TraesCS3D01G537300 chr6B 91.892 111 9 0 3214 3324 132353584 132353474 5.240000e-34 156.0
44 TraesCS3D01G537300 chr2D 90.598 117 10 1 3217 3332 305517903 305517787 1.890000e-33 154.0
45 TraesCS3D01G537300 chr2D 91.071 112 10 0 3222 3333 348192760 348192871 6.780000e-33 152.0
46 TraesCS3D01G537300 chr2D 75.847 236 35 10 1620 1843 245679880 245679655 2.490000e-17 100.0
47 TraesCS3D01G537300 chr4D 78.238 193 25 11 1766 1954 327055535 327055356 1.490000e-19 108.0
48 TraesCS3D01G537300 chr7A 95.000 40 1 1 2871 2910 554854218 554854256 1.180000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G537300 chr3D 610428309 610432227 3918 True 7238.0 7238 100.000000 1 3919 1 chr3D.!!$R4 3918
1 TraesCS3D01G537300 chr3D 610374139 610375812 1673 True 591.5 848 81.679000 2193 3919 2 chr3D.!!$R5 1726
2 TraesCS3D01G537300 chr3D 610419526 610420047 521 True 492.0 492 83.912000 2204 2741 1 chr3D.!!$R3 537
3 TraesCS3D01G537300 chr3A 744663601 744667155 3554 True 1886.0 3592 89.496500 298 3856 2 chr3A.!!$R5 3558
4 TraesCS3D01G537300 chr3A 744613569 744614461 892 True 693.0 693 81.356000 2200 3113 1 chr3A.!!$R3 913
5 TraesCS3D01G537300 chr3A 744467573 744469353 1780 True 575.5 835 80.466000 2064 3918 2 chr3A.!!$R4 1854
6 TraesCS3D01G537300 chr1D 459696936 459697850 914 True 1378.0 1378 93.663000 1154 2084 1 chr1D.!!$R1 930
7 TraesCS3D01G537300 chr1D 44743489 44744402 913 False 1376.0 1376 93.663000 1154 2084 1 chr1D.!!$F2 930
8 TraesCS3D01G537300 chr5D 430275435 430276349 914 True 1367.0 1367 93.469000 1154 2084 1 chr5D.!!$R1 930
9 TraesCS3D01G537300 chr4B 543064402 543066358 1956 False 1018.0 1260 87.804500 855 2787 2 chr4B.!!$F1 1932
10 TraesCS3D01G537300 chrUn 43092730 43095500 2770 False 871.0 1232 84.126000 178 3142 3 chrUn.!!$F2 2964
11 TraesCS3D01G537300 chrUn 43259058 43261828 2770 True 871.0 1232 84.109333 178 3142 3 chrUn.!!$R1 2964
12 TraesCS3D01G537300 chrUn 262839586 262842356 2770 False 871.0 1232 84.126000 178 3142 3 chrUn.!!$F3 2964
13 TraesCS3D01G537300 chrUn 293231553 293234323 2770 False 871.0 1232 84.126000 178 3142 3 chrUn.!!$F4 2964
14 TraesCS3D01G537300 chr4A 229713433 229714428 995 False 935.0 935 83.981000 1129 2159 1 chr4A.!!$F2 1030
15 TraesCS3D01G537300 chr4A 220151473 220152377 904 False 867.0 867 84.336000 1129 2068 1 chr4A.!!$F1 939
16 TraesCS3D01G537300 chr4A 17983301 17983931 630 True 316.0 316 77.086000 1337 1954 1 chr4A.!!$R1 617
17 TraesCS3D01G537300 chr1A 89965942 89966945 1003 True 911.0 911 83.459000 1122 2159 1 chr1A.!!$R1 1037
18 TraesCS3D01G537300 chr5A 496285906 496286609 703 True 268.0 268 74.631000 1517 2237 1 chr5A.!!$R1 720

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
500 513 0.037877 AAAGCTGCAGCCAGATCTGT 59.962 50.0 34.39 11.28 41.77 3.41 F
837 959 0.108089 AGCTGAGCTGAGATGTGCAG 60.108 55.0 5.97 0.00 37.57 4.41 F
844 966 0.108089 CTGAGATGTGCAGCTGAGCT 60.108 55.0 20.43 0.00 40.77 4.09 F
1089 1260 0.392193 CTTCCCACGCTGCTTGATCT 60.392 55.0 7.80 0.00 0.00 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1699 1933 0.250295 TTCTAACAGCAACAGCGGCT 60.250 50.000 0.00 0.0 43.77 5.52 R
2489 2834 0.329931 TGATGCCGGTTGGGTACATT 59.670 50.000 1.90 0.0 38.44 2.71 R
2843 3206 2.425143 ACATATGTGGGCTTCCTGTG 57.575 50.000 7.78 0.0 0.00 3.66 R
2997 3370 2.281761 AGCTGGTGCCGAACAAGG 60.282 61.111 0.00 0.0 40.80 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.622948 CTCCTTTGTTCCTTAGACAAATAAGT 57.377 34.615 3.25 0.00 43.64 2.24
26 27 9.720769 CTCCTTTGTTCCTTAGACAAATAAGTA 57.279 33.333 3.25 0.00 43.64 2.24
48 49 9.449719 AAGTATTCTAAAGATCGTGTTGGAATT 57.550 29.630 17.19 4.95 36.62 2.17
49 50 9.449719 AGTATTCTAAAGATCGTGTTGGAATTT 57.550 29.630 17.19 8.76 36.62 1.82
50 51 9.704098 GTATTCTAAAGATCGTGTTGGAATTTC 57.296 33.333 17.19 10.97 36.62 2.17
51 52 7.979444 TTCTAAAGATCGTGTTGGAATTTCT 57.021 32.000 0.00 0.00 0.00 2.52
52 53 7.596749 TCTAAAGATCGTGTTGGAATTTCTC 57.403 36.000 0.00 0.00 0.00 2.87
53 54 4.928661 AAGATCGTGTTGGAATTTCTCG 57.071 40.909 0.00 0.00 0.00 4.04
54 55 3.926616 AGATCGTGTTGGAATTTCTCGT 58.073 40.909 0.00 0.00 0.00 4.18
55 56 3.679980 AGATCGTGTTGGAATTTCTCGTG 59.320 43.478 0.00 0.00 0.00 4.35
56 57 2.828877 TCGTGTTGGAATTTCTCGTGT 58.171 42.857 0.00 0.00 0.00 4.49
57 58 2.798283 TCGTGTTGGAATTTCTCGTGTC 59.202 45.455 0.00 0.00 0.00 3.67
58 59 2.096417 CGTGTTGGAATTTCTCGTGTCC 60.096 50.000 0.00 0.00 0.00 4.02
59 60 2.096417 GTGTTGGAATTTCTCGTGTCCG 60.096 50.000 0.00 0.00 32.45 4.79
60 61 2.140717 GTTGGAATTTCTCGTGTCCGT 58.859 47.619 0.00 0.00 32.45 4.69
61 62 2.536761 TGGAATTTCTCGTGTCCGTT 57.463 45.000 0.00 0.00 32.45 4.44
62 63 2.841215 TGGAATTTCTCGTGTCCGTTT 58.159 42.857 0.00 0.00 32.45 3.60
63 64 2.546368 TGGAATTTCTCGTGTCCGTTTG 59.454 45.455 0.00 0.00 32.45 2.93
64 65 2.546789 GGAATTTCTCGTGTCCGTTTGT 59.453 45.455 0.00 0.00 35.01 2.83
65 66 3.002965 GGAATTTCTCGTGTCCGTTTGTT 59.997 43.478 0.00 0.00 35.01 2.83
66 67 4.496840 GGAATTTCTCGTGTCCGTTTGTTT 60.497 41.667 0.00 0.00 35.01 2.83
67 68 3.392769 TTTCTCGTGTCCGTTTGTTTG 57.607 42.857 0.00 0.00 35.01 2.93
68 69 2.012937 TCTCGTGTCCGTTTGTTTGT 57.987 45.000 0.00 0.00 35.01 2.83
69 70 1.661617 TCTCGTGTCCGTTTGTTTGTG 59.338 47.619 0.00 0.00 35.01 3.33
70 71 1.395608 CTCGTGTCCGTTTGTTTGTGT 59.604 47.619 0.00 0.00 35.01 3.72
71 72 1.128878 TCGTGTCCGTTTGTTTGTGTG 59.871 47.619 0.00 0.00 35.01 3.82
72 73 1.128878 CGTGTCCGTTTGTTTGTGTGA 59.871 47.619 0.00 0.00 0.00 3.58
73 74 2.511879 GTGTCCGTTTGTTTGTGTGAC 58.488 47.619 0.00 0.00 0.00 3.67
74 75 2.160813 GTGTCCGTTTGTTTGTGTGACT 59.839 45.455 0.00 0.00 0.00 3.41
75 76 3.371591 GTGTCCGTTTGTTTGTGTGACTA 59.628 43.478 0.00 0.00 0.00 2.59
76 77 3.619483 TGTCCGTTTGTTTGTGTGACTAG 59.381 43.478 0.00 0.00 0.00 2.57
77 78 3.866910 GTCCGTTTGTTTGTGTGACTAGA 59.133 43.478 0.00 0.00 0.00 2.43
78 79 4.330620 GTCCGTTTGTTTGTGTGACTAGAA 59.669 41.667 0.00 0.00 0.00 2.10
79 80 4.936411 TCCGTTTGTTTGTGTGACTAGAAA 59.064 37.500 0.00 0.00 0.00 2.52
80 81 5.411977 TCCGTTTGTTTGTGTGACTAGAAAA 59.588 36.000 0.00 0.00 0.00 2.29
81 82 6.094325 TCCGTTTGTTTGTGTGACTAGAAAAT 59.906 34.615 0.00 0.00 0.00 1.82
82 83 6.413818 CCGTTTGTTTGTGTGACTAGAAAATC 59.586 38.462 0.00 0.00 0.00 2.17
83 84 6.413818 CGTTTGTTTGTGTGACTAGAAAATCC 59.586 38.462 0.00 0.00 0.00 3.01
84 85 5.666969 TGTTTGTGTGACTAGAAAATCCG 57.333 39.130 0.00 0.00 0.00 4.18
85 86 5.120399 TGTTTGTGTGACTAGAAAATCCGT 58.880 37.500 0.00 0.00 0.00 4.69
86 87 6.282167 TGTTTGTGTGACTAGAAAATCCGTA 58.718 36.000 0.00 0.00 0.00 4.02
87 88 6.201425 TGTTTGTGTGACTAGAAAATCCGTAC 59.799 38.462 0.00 0.00 0.00 3.67
88 89 4.478699 TGTGTGACTAGAAAATCCGTACG 58.521 43.478 8.69 8.69 0.00 3.67
89 90 3.855950 GTGTGACTAGAAAATCCGTACGG 59.144 47.826 28.66 28.66 0.00 4.02
90 91 3.119388 TGTGACTAGAAAATCCGTACGGG 60.119 47.826 32.80 16.91 35.59 5.28
91 92 2.159198 TGACTAGAAAATCCGTACGGGC 60.159 50.000 32.80 17.04 34.94 6.13
92 93 1.826720 ACTAGAAAATCCGTACGGGCA 59.173 47.619 32.80 16.45 34.94 5.36
93 94 2.234414 ACTAGAAAATCCGTACGGGCAA 59.766 45.455 32.80 15.65 34.94 4.52
94 95 2.413310 AGAAAATCCGTACGGGCAAT 57.587 45.000 32.80 17.32 34.94 3.56
95 96 2.014128 AGAAAATCCGTACGGGCAATG 58.986 47.619 32.80 7.56 34.94 2.82
96 97 0.454196 AAAATCCGTACGGGCAATGC 59.546 50.000 32.80 0.00 34.94 3.56
97 98 0.678366 AAATCCGTACGGGCAATGCA 60.678 50.000 32.80 13.28 34.94 3.96
98 99 1.373590 AATCCGTACGGGCAATGCAC 61.374 55.000 32.80 1.05 34.94 4.57
99 100 2.529454 ATCCGTACGGGCAATGCACA 62.529 55.000 32.80 11.72 34.94 4.57
100 101 2.112198 CCGTACGGGCAATGCACAT 61.112 57.895 27.00 0.00 0.00 3.21
101 102 1.653094 CCGTACGGGCAATGCACATT 61.653 55.000 27.00 0.00 0.00 2.71
102 103 0.248054 CGTACGGGCAATGCACATTC 60.248 55.000 8.67 0.00 0.00 2.67
103 104 0.808125 GTACGGGCAATGCACATTCA 59.192 50.000 8.67 0.00 0.00 2.57
104 105 1.405105 GTACGGGCAATGCACATTCAT 59.595 47.619 8.67 0.00 0.00 2.57
105 106 1.761449 ACGGGCAATGCACATTCATA 58.239 45.000 8.67 0.00 0.00 2.15
106 107 2.309613 ACGGGCAATGCACATTCATAT 58.690 42.857 8.67 0.00 0.00 1.78
107 108 2.694628 ACGGGCAATGCACATTCATATT 59.305 40.909 8.67 0.00 0.00 1.28
108 109 3.888323 ACGGGCAATGCACATTCATATTA 59.112 39.130 8.67 0.00 0.00 0.98
109 110 4.022935 ACGGGCAATGCACATTCATATTAG 60.023 41.667 8.67 0.00 0.00 1.73
110 111 4.216042 CGGGCAATGCACATTCATATTAGA 59.784 41.667 8.67 0.00 0.00 2.10
111 112 5.464168 GGGCAATGCACATTCATATTAGAC 58.536 41.667 7.79 0.00 0.00 2.59
112 113 5.149273 GGCAATGCACATTCATATTAGACG 58.851 41.667 7.79 0.00 0.00 4.18
113 114 5.149273 GCAATGCACATTCATATTAGACGG 58.851 41.667 0.00 0.00 0.00 4.79
114 115 5.277974 GCAATGCACATTCATATTAGACGGT 60.278 40.000 0.00 0.00 0.00 4.83
115 116 6.073276 GCAATGCACATTCATATTAGACGGTA 60.073 38.462 0.00 0.00 0.00 4.02
116 117 7.361201 GCAATGCACATTCATATTAGACGGTAT 60.361 37.037 0.00 0.00 0.00 2.73
117 118 9.150348 CAATGCACATTCATATTAGACGGTATA 57.850 33.333 0.00 0.00 0.00 1.47
118 119 9.890629 AATGCACATTCATATTAGACGGTATAT 57.109 29.630 0.00 0.00 0.00 0.86
119 120 9.890629 ATGCACATTCATATTAGACGGTATATT 57.109 29.630 0.00 0.00 0.00 1.28
127 128 9.850628 TCATATTAGACGGTATATTAGTTGCAC 57.149 33.333 0.00 0.00 0.00 4.57
128 129 9.084164 CATATTAGACGGTATATTAGTTGCACC 57.916 37.037 0.00 0.00 0.00 5.01
129 130 6.720112 TTAGACGGTATATTAGTTGCACCT 57.280 37.500 0.00 0.00 0.00 4.00
130 131 7.822161 TTAGACGGTATATTAGTTGCACCTA 57.178 36.000 0.00 0.00 0.00 3.08
131 132 6.328641 AGACGGTATATTAGTTGCACCTAG 57.671 41.667 0.00 0.00 0.00 3.02
132 133 5.243283 AGACGGTATATTAGTTGCACCTAGG 59.757 44.000 7.41 7.41 0.00 3.02
133 134 4.897670 ACGGTATATTAGTTGCACCTAGGT 59.102 41.667 9.21 9.21 0.00 3.08
134 135 6.070656 ACGGTATATTAGTTGCACCTAGGTA 58.929 40.000 15.80 0.00 0.00 3.08
135 136 6.208204 ACGGTATATTAGTTGCACCTAGGTAG 59.792 42.308 15.80 10.42 0.00 3.18
136 137 6.396450 GGTATATTAGTTGCACCTAGGTAGC 58.604 44.000 15.80 19.91 0.00 3.58
137 138 6.014840 GGTATATTAGTTGCACCTAGGTAGCA 60.015 42.308 25.71 25.71 36.32 3.49
138 139 6.688073 ATATTAGTTGCACCTAGGTAGCAT 57.312 37.500 28.23 20.64 38.19 3.79
139 140 7.792364 ATATTAGTTGCACCTAGGTAGCATA 57.208 36.000 28.23 20.67 38.19 3.14
140 141 6.688073 ATTAGTTGCACCTAGGTAGCATAT 57.312 37.500 28.23 22.99 38.19 1.78
141 142 6.494666 TTAGTTGCACCTAGGTAGCATATT 57.505 37.500 28.23 21.03 38.19 1.28
142 143 7.606135 TTAGTTGCACCTAGGTAGCATATTA 57.394 36.000 28.23 20.34 38.19 0.98
143 144 6.688073 AGTTGCACCTAGGTAGCATATTAT 57.312 37.500 28.23 15.78 38.19 1.28
144 145 7.079451 AGTTGCACCTAGGTAGCATATTATT 57.921 36.000 28.23 14.63 38.19 1.40
145 146 7.518188 AGTTGCACCTAGGTAGCATATTATTT 58.482 34.615 28.23 13.37 38.19 1.40
146 147 7.445402 AGTTGCACCTAGGTAGCATATTATTTG 59.555 37.037 28.23 10.31 38.19 2.32
147 148 6.837312 TGCACCTAGGTAGCATATTATTTGT 58.163 36.000 25.71 0.00 32.55 2.83
148 149 6.710295 TGCACCTAGGTAGCATATTATTTGTG 59.290 38.462 25.71 7.50 32.55 3.33
149 150 6.710744 GCACCTAGGTAGCATATTATTTGTGT 59.289 38.462 23.37 0.00 0.00 3.72
150 151 7.307989 GCACCTAGGTAGCATATTATTTGTGTG 60.308 40.741 23.37 5.50 0.00 3.82
151 152 7.173218 CACCTAGGTAGCATATTATTTGTGTGG 59.827 40.741 15.80 0.00 0.00 4.17
152 153 7.147373 ACCTAGGTAGCATATTATTTGTGTGGT 60.147 37.037 14.41 0.00 0.00 4.16
153 154 8.372459 CCTAGGTAGCATATTATTTGTGTGGTA 58.628 37.037 0.00 0.00 0.00 3.25
154 155 9.772973 CTAGGTAGCATATTATTTGTGTGGTAA 57.227 33.333 0.00 0.00 0.00 2.85
156 157 9.640952 AGGTAGCATATTATTTGTGTGGTAATT 57.359 29.630 0.00 0.00 0.00 1.40
166 167 5.788055 TTGTGTGGTAATTATGTGTAGCG 57.212 39.130 0.00 0.00 0.00 4.26
167 168 3.619483 TGTGTGGTAATTATGTGTAGCGC 59.381 43.478 0.00 0.00 0.00 5.92
168 169 3.869246 GTGTGGTAATTATGTGTAGCGCT 59.131 43.478 17.26 17.26 0.00 5.92
169 170 3.868661 TGTGGTAATTATGTGTAGCGCTG 59.131 43.478 22.90 0.00 0.00 5.18
170 171 4.116961 GTGGTAATTATGTGTAGCGCTGA 58.883 43.478 22.90 2.93 0.00 4.26
171 172 4.569162 GTGGTAATTATGTGTAGCGCTGAA 59.431 41.667 22.90 4.69 0.00 3.02
172 173 5.064198 GTGGTAATTATGTGTAGCGCTGAAA 59.936 40.000 22.90 1.07 0.00 2.69
173 174 5.820423 TGGTAATTATGTGTAGCGCTGAAAT 59.180 36.000 22.90 9.69 0.00 2.17
174 175 6.317642 TGGTAATTATGTGTAGCGCTGAAATT 59.682 34.615 22.90 16.81 0.00 1.82
175 176 6.632834 GGTAATTATGTGTAGCGCTGAAATTG 59.367 38.462 22.90 0.00 0.00 2.32
176 177 5.818136 ATTATGTGTAGCGCTGAAATTGT 57.182 34.783 22.90 2.41 0.00 2.71
181 182 6.007936 TGTGTAGCGCTGAAATTGTTATTT 57.992 33.333 22.90 0.00 36.68 1.40
186 187 6.207691 AGCGCTGAAATTGTTATTTGGTAT 57.792 33.333 10.39 0.00 34.16 2.73
187 188 6.035843 AGCGCTGAAATTGTTATTTGGTATG 58.964 36.000 10.39 0.00 34.16 2.39
204 206 4.749598 TGGTATGATATTAACTGCACGCTG 59.250 41.667 0.00 0.00 0.00 5.18
227 229 0.725784 GCGTTGAGCGTTCACCATTG 60.726 55.000 0.00 0.00 43.66 2.82
230 232 1.812571 GTTGAGCGTTCACCATTGGAT 59.187 47.619 10.37 0.00 31.71 3.41
231 233 3.006940 GTTGAGCGTTCACCATTGGATA 58.993 45.455 10.37 0.00 31.71 2.59
232 234 2.905075 TGAGCGTTCACCATTGGATAG 58.095 47.619 10.37 0.00 0.00 2.08
233 235 1.599542 GAGCGTTCACCATTGGATAGC 59.400 52.381 10.37 7.40 0.00 2.97
235 237 1.747206 GCGTTCACCATTGGATAGCCT 60.747 52.381 10.37 0.00 34.31 4.58
236 238 1.942657 CGTTCACCATTGGATAGCCTG 59.057 52.381 10.37 0.00 34.31 4.85
237 239 1.678101 GTTCACCATTGGATAGCCTGC 59.322 52.381 10.37 0.00 34.31 4.85
238 240 0.179048 TCACCATTGGATAGCCTGCG 60.179 55.000 10.37 0.00 34.31 5.18
239 241 0.464373 CACCATTGGATAGCCTGCGT 60.464 55.000 10.37 0.00 34.31 5.24
246 249 0.106708 GGATAGCCTGCGTCATTGGA 59.893 55.000 0.00 0.00 0.00 3.53
248 251 1.802960 GATAGCCTGCGTCATTGGATG 59.197 52.381 0.00 0.00 0.00 3.51
250 253 2.484062 GCCTGCGTCATTGGATGGG 61.484 63.158 0.00 0.00 0.00 4.00
253 256 2.124151 GCGTCATTGGATGGGCCT 60.124 61.111 4.53 0.00 37.63 5.19
254 257 1.148273 GCGTCATTGGATGGGCCTA 59.852 57.895 4.53 0.00 37.63 3.93
278 281 0.740737 GATGGCCGAGATTTGTTGGG 59.259 55.000 0.00 0.00 0.00 4.12
282 285 0.804989 GCCGAGATTTGTTGGGTCTG 59.195 55.000 0.00 0.00 0.00 3.51
295 298 2.539081 GGTCTGCCCCTTTGGTCCT 61.539 63.158 0.00 0.00 36.04 3.85
296 299 1.460699 GTCTGCCCCTTTGGTCCTT 59.539 57.895 0.00 0.00 36.04 3.36
298 301 1.285078 GTCTGCCCCTTTGGTCCTTAT 59.715 52.381 0.00 0.00 36.04 1.73
300 303 3.138468 GTCTGCCCCTTTGGTCCTTATAT 59.862 47.826 0.00 0.00 36.04 0.86
301 304 4.349930 GTCTGCCCCTTTGGTCCTTATATA 59.650 45.833 0.00 0.00 36.04 0.86
302 305 5.014228 GTCTGCCCCTTTGGTCCTTATATAT 59.986 44.000 0.00 0.00 36.04 0.86
303 306 6.214819 GTCTGCCCCTTTGGTCCTTATATATA 59.785 42.308 0.00 0.00 36.04 0.86
304 307 6.214819 TCTGCCCCTTTGGTCCTTATATATAC 59.785 42.308 0.00 0.00 36.04 1.47
305 308 5.852807 TGCCCCTTTGGTCCTTATATATACA 59.147 40.000 0.00 0.00 36.04 2.29
372 375 4.091945 CACTATGTGACACAAGGAACATCG 59.908 45.833 13.23 0.00 35.23 3.84
375 378 0.948623 TGACACAAGGAACATCGCCG 60.949 55.000 0.00 0.00 0.00 6.46
421 434 1.947456 GGTTCAGAAAACAGACCGCTT 59.053 47.619 0.00 0.00 0.00 4.68
422 435 2.287009 GGTTCAGAAAACAGACCGCTTG 60.287 50.000 0.00 0.00 0.00 4.01
423 436 2.325583 TCAGAAAACAGACCGCTTGT 57.674 45.000 0.00 0.00 0.00 3.16
424 437 2.639065 TCAGAAAACAGACCGCTTGTT 58.361 42.857 0.00 0.00 0.00 2.83
425 438 2.612212 TCAGAAAACAGACCGCTTGTTC 59.388 45.455 0.00 0.00 0.00 3.18
427 440 3.013921 AGAAAACAGACCGCTTGTTCAA 58.986 40.909 0.00 0.00 0.00 2.69
428 441 3.442273 AGAAAACAGACCGCTTGTTCAAA 59.558 39.130 0.00 0.00 0.00 2.69
429 442 2.844122 AACAGACCGCTTGTTCAAAC 57.156 45.000 0.00 0.00 0.00 2.93
432 445 1.670811 CAGACCGCTTGTTCAAACTGT 59.329 47.619 0.00 0.00 0.00 3.55
433 446 1.940613 AGACCGCTTGTTCAAACTGTC 59.059 47.619 3.53 3.53 0.00 3.51
435 448 1.940613 ACCGCTTGTTCAAACTGTCTC 59.059 47.619 0.00 0.00 0.00 3.36
437 450 3.181469 ACCGCTTGTTCAAACTGTCTCTA 60.181 43.478 0.00 0.00 0.00 2.43
439 452 3.121328 CGCTTGTTCAAACTGTCTCTACG 60.121 47.826 0.00 0.00 0.00 3.51
440 453 3.363084 GCTTGTTCAAACTGTCTCTACGC 60.363 47.826 0.00 0.00 0.00 4.42
441 454 3.446310 TGTTCAAACTGTCTCTACGCA 57.554 42.857 0.00 0.00 0.00 5.24
442 455 3.381045 TGTTCAAACTGTCTCTACGCAG 58.619 45.455 0.00 0.00 38.58 5.18
443 456 3.067601 TGTTCAAACTGTCTCTACGCAGA 59.932 43.478 0.00 0.00 36.62 4.26
444 457 4.238514 GTTCAAACTGTCTCTACGCAGAT 58.761 43.478 0.00 0.00 36.62 2.90
445 458 5.048294 TGTTCAAACTGTCTCTACGCAGATA 60.048 40.000 0.00 0.00 36.62 1.98
447 460 5.399858 TCAAACTGTCTCTACGCAGATAAC 58.600 41.667 0.00 0.00 36.62 1.89
448 461 4.373348 AACTGTCTCTACGCAGATAACC 57.627 45.455 0.00 0.00 36.62 2.85
449 462 3.622630 ACTGTCTCTACGCAGATAACCT 58.377 45.455 0.00 0.00 36.62 3.50
450 463 3.378742 ACTGTCTCTACGCAGATAACCTG 59.621 47.826 0.00 0.00 45.67 4.00
452 465 4.207955 TGTCTCTACGCAGATAACCTGAT 58.792 43.478 0.00 0.00 45.78 2.90
453 466 4.645136 TGTCTCTACGCAGATAACCTGATT 59.355 41.667 0.00 0.00 45.78 2.57
455 468 4.887655 TCTCTACGCAGATAACCTGATTCA 59.112 41.667 0.00 0.00 45.78 2.57
457 470 5.773575 TCTACGCAGATAACCTGATTCATC 58.226 41.667 0.00 0.00 45.78 2.92
458 471 4.679373 ACGCAGATAACCTGATTCATCT 57.321 40.909 0.00 0.00 45.78 2.90
460 473 4.813161 ACGCAGATAACCTGATTCATCTTG 59.187 41.667 0.00 0.00 45.78 3.02
461 474 4.319333 CGCAGATAACCTGATTCATCTTGC 60.319 45.833 0.00 0.00 45.78 4.01
464 477 6.238953 GCAGATAACCTGATTCATCTTGCAAT 60.239 38.462 0.00 0.00 45.78 3.56
465 478 7.361127 CAGATAACCTGATTCATCTTGCAATC 58.639 38.462 0.00 0.00 45.78 2.67
466 479 7.012989 CAGATAACCTGATTCATCTTGCAATCA 59.987 37.037 0.00 0.00 45.78 2.57
470 483 5.562506 CTGATTCATCTTGCAATCAGTGT 57.437 39.130 14.56 0.00 45.93 3.55
471 484 5.556355 TGATTCATCTTGCAATCAGTGTC 57.444 39.130 0.00 0.00 34.71 3.67
472 485 5.005094 TGATTCATCTTGCAATCAGTGTCA 58.995 37.500 0.00 0.00 34.71 3.58
473 486 5.123344 TGATTCATCTTGCAATCAGTGTCAG 59.877 40.000 0.00 0.00 34.71 3.51
474 487 3.340928 TCATCTTGCAATCAGTGTCAGG 58.659 45.455 0.00 0.00 0.00 3.86
475 488 3.008266 TCATCTTGCAATCAGTGTCAGGA 59.992 43.478 0.00 0.00 0.00 3.86
476 489 3.708403 TCTTGCAATCAGTGTCAGGAT 57.292 42.857 0.00 0.00 0.00 3.24
477 490 3.603532 TCTTGCAATCAGTGTCAGGATC 58.396 45.455 0.00 0.00 0.00 3.36
478 491 3.008266 TCTTGCAATCAGTGTCAGGATCA 59.992 43.478 0.00 0.00 0.00 2.92
479 492 3.421919 TGCAATCAGTGTCAGGATCAA 57.578 42.857 0.00 0.00 0.00 2.57
480 493 3.340928 TGCAATCAGTGTCAGGATCAAG 58.659 45.455 0.00 0.00 0.00 3.02
481 494 3.008266 TGCAATCAGTGTCAGGATCAAGA 59.992 43.478 0.00 0.00 0.00 3.02
482 495 4.005650 GCAATCAGTGTCAGGATCAAGAA 58.994 43.478 0.00 0.00 0.00 2.52
483 496 4.456911 GCAATCAGTGTCAGGATCAAGAAA 59.543 41.667 0.00 0.00 0.00 2.52
484 497 5.391736 GCAATCAGTGTCAGGATCAAGAAAG 60.392 44.000 0.00 0.00 0.00 2.62
485 498 3.668447 TCAGTGTCAGGATCAAGAAAGC 58.332 45.455 0.00 0.00 0.00 3.51
486 499 3.326006 TCAGTGTCAGGATCAAGAAAGCT 59.674 43.478 0.00 0.00 0.00 3.74
487 500 3.436015 CAGTGTCAGGATCAAGAAAGCTG 59.564 47.826 0.00 0.00 0.00 4.24
488 501 2.161211 GTGTCAGGATCAAGAAAGCTGC 59.839 50.000 0.00 0.00 0.00 5.25
489 502 2.224597 TGTCAGGATCAAGAAAGCTGCA 60.225 45.455 1.02 0.00 0.00 4.41
490 503 2.419324 GTCAGGATCAAGAAAGCTGCAG 59.581 50.000 10.11 10.11 0.00 4.41
491 504 1.132643 CAGGATCAAGAAAGCTGCAGC 59.867 52.381 31.53 31.53 42.49 5.25
492 505 0.455005 GGATCAAGAAAGCTGCAGCC 59.545 55.000 34.39 19.70 43.38 4.85
493 506 1.171308 GATCAAGAAAGCTGCAGCCA 58.829 50.000 34.39 10.59 43.38 4.75
494 507 1.132643 GATCAAGAAAGCTGCAGCCAG 59.867 52.381 34.39 17.52 43.38 4.85
495 508 0.109153 TCAAGAAAGCTGCAGCCAGA 59.891 50.000 34.39 19.43 41.77 3.86
496 509 1.174783 CAAGAAAGCTGCAGCCAGAT 58.825 50.000 34.39 18.28 41.77 2.90
497 510 1.132643 CAAGAAAGCTGCAGCCAGATC 59.867 52.381 34.39 24.80 41.77 2.75
498 511 0.619505 AGAAAGCTGCAGCCAGATCT 59.380 50.000 34.39 26.44 41.77 2.75
499 512 0.733729 GAAAGCTGCAGCCAGATCTG 59.266 55.000 34.39 16.24 41.77 2.90
500 513 0.037877 AAAGCTGCAGCCAGATCTGT 59.962 50.000 34.39 11.28 41.77 3.41
501 514 0.907486 AAGCTGCAGCCAGATCTGTA 59.093 50.000 34.39 1.95 41.77 2.74
502 515 0.464870 AGCTGCAGCCAGATCTGTAG 59.535 55.000 34.39 11.25 45.63 2.74
503 516 0.463204 GCTGCAGCCAGATCTGTAGA 59.537 55.000 28.76 0.11 45.70 2.59
504 517 1.805871 GCTGCAGCCAGATCTGTAGAC 60.806 57.143 28.76 8.74 45.70 2.59
505 518 0.457443 TGCAGCCAGATCTGTAGACG 59.543 55.000 21.11 6.76 36.49 4.18
506 519 0.873743 GCAGCCAGATCTGTAGACGC 60.874 60.000 21.11 16.00 36.49 5.19
507 520 0.593518 CAGCCAGATCTGTAGACGCG 60.594 60.000 21.11 3.53 0.00 6.01
508 521 0.748367 AGCCAGATCTGTAGACGCGA 60.748 55.000 21.11 0.00 0.00 5.87
509 522 0.592754 GCCAGATCTGTAGACGCGAC 60.593 60.000 21.11 6.86 0.00 5.19
510 523 0.733150 CCAGATCTGTAGACGCGACA 59.267 55.000 21.11 5.93 0.00 4.35
511 524 1.532090 CCAGATCTGTAGACGCGACAC 60.532 57.143 21.11 7.90 0.00 3.67
512 525 1.130561 CAGATCTGTAGACGCGACACA 59.869 52.381 15.93 12.49 0.00 3.72
513 526 1.398739 AGATCTGTAGACGCGACACAG 59.601 52.381 23.71 23.71 40.83 3.66
514 527 2.922779 TCTGTAGACGCGACACAGA 58.077 52.632 26.35 26.35 44.78 3.41
515 528 1.450025 TCTGTAGACGCGACACAGAT 58.550 50.000 26.35 5.54 42.75 2.90
516 529 2.624636 TCTGTAGACGCGACACAGATA 58.375 47.619 26.35 13.78 42.75 1.98
517 530 3.004862 TCTGTAGACGCGACACAGATAA 58.995 45.455 26.35 13.27 42.75 1.75
518 531 3.437741 TCTGTAGACGCGACACAGATAAA 59.562 43.478 26.35 13.01 42.75 1.40
519 532 3.495193 TGTAGACGCGACACAGATAAAC 58.505 45.455 15.93 0.00 0.00 2.01
520 533 1.614385 AGACGCGACACAGATAAACG 58.386 50.000 15.93 0.00 0.00 3.60
521 534 0.638746 GACGCGACACAGATAAACGG 59.361 55.000 15.93 0.00 0.00 4.44
538 635 1.013596 CGGTGTTTCACTGTGCTTCA 58.986 50.000 2.12 0.00 36.14 3.02
555 652 0.750249 TCAACAGAGGAACGACTGCA 59.250 50.000 0.00 0.00 40.03 4.41
556 653 1.138069 TCAACAGAGGAACGACTGCAA 59.862 47.619 0.00 0.00 40.03 4.08
558 655 1.040646 ACAGAGGAACGACTGCAAGA 58.959 50.000 0.00 0.00 40.03 3.02
575 674 5.869579 TGCAAGAAACAGGAAATCTACTCT 58.130 37.500 0.00 0.00 0.00 3.24
577 676 6.169800 GCAAGAAACAGGAAATCTACTCTCT 58.830 40.000 0.00 0.00 0.00 3.10
578 677 6.652900 GCAAGAAACAGGAAATCTACTCTCTT 59.347 38.462 0.00 0.00 0.00 2.85
580 679 6.941857 AGAAACAGGAAATCTACTCTCTTCC 58.058 40.000 0.00 0.00 38.09 3.46
581 680 6.498651 AGAAACAGGAAATCTACTCTCTTCCA 59.501 38.462 2.78 0.00 39.91 3.53
598 697 6.665248 TCTCTTCCAACAGATGAATACAGAGA 59.335 38.462 0.00 0.00 0.00 3.10
602 701 8.690203 TTCCAACAGATGAATACAGAGAAAAA 57.310 30.769 0.00 0.00 0.00 1.94
603 702 8.868522 TCCAACAGATGAATACAGAGAAAAAT 57.131 30.769 0.00 0.00 0.00 1.82
605 704 9.350357 CCAACAGATGAATACAGAGAAAAATTG 57.650 33.333 0.00 0.00 0.00 2.32
606 705 8.857216 CAACAGATGAATACAGAGAAAAATTGC 58.143 33.333 0.00 0.00 0.00 3.56
628 727 4.264460 TCTGAGAAAAACAGAGAGGAGC 57.736 45.455 0.00 0.00 39.10 4.70
635 734 1.889545 AACAGAGAGGAGCTTTGTGC 58.110 50.000 0.00 0.00 40.73 4.57
644 743 0.392327 GAGCTTTGTGCCTCCTCCTC 60.392 60.000 0.00 0.00 44.23 3.71
648 747 2.129555 TTTGTGCCTCCTCCTCTGCC 62.130 60.000 0.00 0.00 0.00 4.85
682 781 3.673902 TCGATGAGCAAACAGAATCCAA 58.326 40.909 0.00 0.00 0.00 3.53
692 791 3.252974 ACAGAATCCAATCTCCGTGAC 57.747 47.619 0.00 0.00 0.00 3.67
694 793 3.193263 CAGAATCCAATCTCCGTGACTG 58.807 50.000 0.00 0.00 0.00 3.51
695 794 3.099905 AGAATCCAATCTCCGTGACTGA 58.900 45.455 0.00 0.00 0.00 3.41
696 795 2.969628 ATCCAATCTCCGTGACTGAC 57.030 50.000 0.00 0.00 0.00 3.51
704 803 2.029073 CGTGACTGACGGGCAACT 59.971 61.111 0.00 0.00 44.85 3.16
705 804 1.287815 CGTGACTGACGGGCAACTA 59.712 57.895 0.00 0.00 44.85 2.24
706 805 0.732880 CGTGACTGACGGGCAACTAG 60.733 60.000 0.00 0.00 44.85 2.57
753 853 3.439476 AGTGCAGTTGAGCAGAATTCATC 59.561 43.478 8.44 3.47 46.69 2.92
758 858 2.948315 GTTGAGCAGAATTCATCCTCCC 59.052 50.000 8.44 0.91 0.00 4.30
775 897 3.612681 CTGGGTCGTGGTGGTCGT 61.613 66.667 0.00 0.00 0.00 4.34
780 902 1.066918 GTCGTGGTGGTCGTTCAGT 59.933 57.895 0.00 0.00 0.00 3.41
832 954 2.980562 GCTGAGCTGAGCTGAGATG 58.019 57.895 24.94 0.00 42.26 2.90
833 955 0.176219 GCTGAGCTGAGCTGAGATGT 59.824 55.000 24.94 0.00 42.26 3.06
834 956 1.929230 CTGAGCTGAGCTGAGATGTG 58.071 55.000 16.12 0.00 42.26 3.21
835 957 0.108281 TGAGCTGAGCTGAGATGTGC 60.108 55.000 13.71 0.00 39.88 4.57
836 958 0.108281 GAGCTGAGCTGAGATGTGCA 60.108 55.000 13.71 0.00 39.88 4.57
837 959 0.108089 AGCTGAGCTGAGATGTGCAG 60.108 55.000 5.97 0.00 37.57 4.41
843 965 2.385237 CTGAGATGTGCAGCTGAGC 58.615 57.895 20.43 9.55 0.00 4.26
844 966 0.108089 CTGAGATGTGCAGCTGAGCT 60.108 55.000 20.43 0.00 40.77 4.09
1089 1260 0.392193 CTTCCCACGCTGCTTGATCT 60.392 55.000 7.80 0.00 0.00 2.75
1098 1269 1.209019 GCTGCTTGATCTCTCCTTCCA 59.791 52.381 0.00 0.00 0.00 3.53
1732 1966 9.118236 GTTGCTGTTAGAATAACTGAAAATGTC 57.882 33.333 9.81 0.00 0.00 3.06
1733 1967 8.621532 TGCTGTTAGAATAACTGAAAATGTCT 57.378 30.769 9.81 0.00 0.00 3.41
1750 2002 7.592885 AAATGTCTTCCTGAAATATGGATGG 57.407 36.000 0.00 0.00 31.76 3.51
1953 2215 5.045215 GTGCACATTACTTACTGCCGTATA 58.955 41.667 13.17 0.00 0.00 1.47
2095 2373 5.486526 CTTTAAAGCAGAGGATGACAGAGT 58.513 41.667 1.47 0.00 0.00 3.24
2125 2408 8.024865 TGTGCTGCATATTATTATTCATCAAGC 58.975 33.333 5.27 0.00 0.00 4.01
2198 2481 8.378172 TGTGTTTATCTCAAATTATCCGATCC 57.622 34.615 0.00 0.00 0.00 3.36
2208 2491 7.059788 TCAAATTATCCGATCCCTTCATTGAA 58.940 34.615 0.00 0.00 0.00 2.69
2241 2524 5.362556 TGTAAATTCTGCAGCTTTCAGAC 57.637 39.130 9.47 7.30 39.99 3.51
2272 2597 5.211174 AGTTACTCTAGTGTTGGGTGTTC 57.789 43.478 2.25 0.00 0.00 3.18
2273 2598 4.652421 AGTTACTCTAGTGTTGGGTGTTCA 59.348 41.667 2.25 0.00 0.00 3.18
2418 2760 5.425577 TTGTAAGTCAGCGCAACATTAAA 57.574 34.783 11.47 0.00 0.00 1.52
2489 2834 5.477291 GTGCAGGTATAGCTCATTCCTAGTA 59.523 44.000 0.26 0.00 32.89 1.82
2557 2902 4.096833 TGCATTGCAGTTCATCAAGGTATC 59.903 41.667 7.38 0.00 33.32 2.24
2601 2946 3.418995 AGAGCAGTTGATCAATGCACTT 58.581 40.909 28.60 17.24 42.45 3.16
2614 2959 9.681692 TGATCAATGCACTTATAAATTGTATGC 57.318 29.630 0.00 0.00 32.92 3.14
2641 2988 8.915871 TGTTGCTAATTTATGCTTCTTCATTC 57.084 30.769 0.00 0.00 0.00 2.67
2790 3146 1.991264 CTCGCTATCGATTCATGCCTG 59.009 52.381 1.71 0.00 44.56 4.85
2822 3185 1.336887 CCTAGTGTGTGTGCGCTTACT 60.337 52.381 9.73 6.49 0.00 2.24
2930 3303 4.759782 AGACTGCGTAACTTATTGATGCT 58.240 39.130 0.00 0.00 0.00 3.79
2961 3334 4.957954 AGATTTGGTGGCATATCATTGTGT 59.042 37.500 0.00 0.00 0.00 3.72
2962 3335 5.422970 AGATTTGGTGGCATATCATTGTGTT 59.577 36.000 0.00 0.00 0.00 3.32
2963 3336 5.480642 TTTGGTGGCATATCATTGTGTTT 57.519 34.783 0.00 0.00 0.00 2.83
3047 3421 6.595326 GGATCATCAAACTCTTGTGTCATGTA 59.405 38.462 0.00 0.00 33.94 2.29
3115 3489 6.128282 CGTCTAAACAGTAATGACCAGCAATT 60.128 38.462 0.00 0.00 0.00 2.32
3142 3516 1.681538 TGCCGTAAACCTTGCTGAAA 58.318 45.000 0.00 0.00 0.00 2.69
3167 3541 5.745227 CCAAAATGTACCTACCAGATGTCT 58.255 41.667 0.00 0.00 0.00 3.41
3168 3542 6.631766 GCCAAAATGTACCTACCAGATGTCTA 60.632 42.308 0.00 0.00 0.00 2.59
3227 3604 5.699458 GGAATACCACAAACATATACTCCCG 59.301 44.000 0.00 0.00 35.97 5.14
3234 3611 0.677842 ACATATACTCCCGCCGTTCC 59.322 55.000 0.00 0.00 0.00 3.62
3268 3645 9.520515 AAGCCTTTTTAGAGATTTCAATACAGA 57.479 29.630 0.00 0.00 0.00 3.41
3269 3646 9.692325 AGCCTTTTTAGAGATTTCAATACAGAT 57.308 29.630 0.00 0.00 0.00 2.90
3298 3675 9.708222 CATACACAGCAAAATAAGTGAATCTAC 57.292 33.333 0.00 0.00 35.97 2.59
3392 3798 6.867816 ACTAATACCGTTACGAACACATTGAA 59.132 34.615 6.24 0.00 0.00 2.69
3523 4004 2.393271 AAAAGATCTCTCTGTGGCCG 57.607 50.000 0.00 0.00 0.00 6.13
3546 4027 4.395542 GGCTTATGATCTTGGATCTCATGC 59.604 45.833 8.66 8.98 32.20 4.06
3550 4031 2.224137 TGATCTTGGATCTCATGCGGAC 60.224 50.000 8.66 0.00 0.00 4.79
3712 4193 0.678684 TCGGCCTCGTACACATCTGA 60.679 55.000 0.00 0.00 37.69 3.27
3733 4214 0.877649 CTGCAGGTGTAGCTATGCGG 60.878 60.000 5.57 10.63 41.58 5.69
3734 4215 1.595382 GCAGGTGTAGCTATGCGGG 60.595 63.158 0.00 0.00 0.00 6.13
3735 4216 1.069765 CAGGTGTAGCTATGCGGGG 59.930 63.158 0.00 0.00 0.00 5.73
3737 4218 2.440817 GGTGTAGCTATGCGGGGGT 61.441 63.158 0.00 0.00 0.00 4.95
3738 4219 1.525442 GTGTAGCTATGCGGGGGTT 59.475 57.895 0.00 0.00 0.00 4.11
3865 4352 0.741221 GAGTGGATGCCGGTGTTCTC 60.741 60.000 1.90 0.59 0.00 2.87
3868 4355 1.296715 GGATGCCGGTGTTCTCTGT 59.703 57.895 1.90 0.00 0.00 3.41
3873 4360 1.078759 GCCGGTGTTCTCTGTCATCG 61.079 60.000 1.90 0.00 37.83 3.84
3874 4361 1.078759 CCGGTGTTCTCTGTCATCGC 61.079 60.000 0.00 0.00 36.94 4.58
3879 4366 3.738282 GGTGTTCTCTGTCATCGCATATC 59.262 47.826 0.00 0.00 0.00 1.63
3881 4368 3.066760 TGTTCTCTGTCATCGCATATCGT 59.933 43.478 0.00 0.00 39.67 3.73
3883 4370 2.878406 TCTCTGTCATCGCATATCGTGA 59.122 45.455 0.00 0.00 39.67 4.35
3888 4375 0.161658 CATCGCATATCGTGAACGGC 59.838 55.000 2.59 0.00 37.76 5.68
3892 4379 1.014352 GCATATCGTGAACGGCCTTT 58.986 50.000 0.00 0.00 40.29 3.11
3893 4380 1.268032 GCATATCGTGAACGGCCTTTG 60.268 52.381 0.00 0.00 40.29 2.77
3899 4386 0.951558 GTGAACGGCCTTTGTCATGT 59.048 50.000 0.00 0.00 0.00 3.21
3900 4387 1.336755 GTGAACGGCCTTTGTCATGTT 59.663 47.619 0.00 0.00 0.00 2.71
3914 4401 5.209818 TGTCATGTTCTCCGTTTAGAGTT 57.790 39.130 0.00 0.00 35.28 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.622948 ACTTATTTGTCTAAGGAACAAAGGAG 57.377 34.615 7.40 9.03 36.89 3.69
22 23 9.449719 AATTCCAACACGATCTTTAGAATACTT 57.550 29.630 0.00 0.00 0.00 2.24
23 24 9.449719 AAATTCCAACACGATCTTTAGAATACT 57.550 29.630 0.00 0.00 0.00 2.12
24 25 9.704098 GAAATTCCAACACGATCTTTAGAATAC 57.296 33.333 0.00 0.00 0.00 1.89
25 26 9.667107 AGAAATTCCAACACGATCTTTAGAATA 57.333 29.630 0.00 0.00 0.00 1.75
26 27 8.567285 AGAAATTCCAACACGATCTTTAGAAT 57.433 30.769 0.00 0.00 0.00 2.40
27 28 7.148639 CGAGAAATTCCAACACGATCTTTAGAA 60.149 37.037 0.00 0.00 0.00 2.10
28 29 6.310467 CGAGAAATTCCAACACGATCTTTAGA 59.690 38.462 0.00 0.00 0.00 2.10
29 30 6.090898 ACGAGAAATTCCAACACGATCTTTAG 59.909 38.462 0.00 0.00 0.00 1.85
30 31 5.929992 ACGAGAAATTCCAACACGATCTTTA 59.070 36.000 0.00 0.00 0.00 1.85
31 32 4.755123 ACGAGAAATTCCAACACGATCTTT 59.245 37.500 0.00 0.00 0.00 2.52
32 33 4.152402 CACGAGAAATTCCAACACGATCTT 59.848 41.667 0.00 0.00 0.00 2.40
33 34 3.679980 CACGAGAAATTCCAACACGATCT 59.320 43.478 0.00 0.00 0.00 2.75
34 35 3.432252 ACACGAGAAATTCCAACACGATC 59.568 43.478 0.00 0.00 0.00 3.69
35 36 3.399330 ACACGAGAAATTCCAACACGAT 58.601 40.909 0.00 0.00 0.00 3.73
36 37 2.798283 GACACGAGAAATTCCAACACGA 59.202 45.455 0.00 0.00 0.00 4.35
37 38 2.096417 GGACACGAGAAATTCCAACACG 60.096 50.000 0.00 0.00 0.00 4.49
38 39 2.096417 CGGACACGAGAAATTCCAACAC 60.096 50.000 0.00 0.00 44.60 3.32
39 40 2.139917 CGGACACGAGAAATTCCAACA 58.860 47.619 0.00 0.00 44.60 3.33
40 41 2.140717 ACGGACACGAGAAATTCCAAC 58.859 47.619 0.00 0.00 44.60 3.77
41 42 2.536761 ACGGACACGAGAAATTCCAA 57.463 45.000 0.00 0.00 44.60 3.53
42 43 2.536761 AACGGACACGAGAAATTCCA 57.463 45.000 0.00 0.00 44.60 3.53
43 44 2.546789 ACAAACGGACACGAGAAATTCC 59.453 45.455 0.00 0.00 44.60 3.01
44 45 3.872560 ACAAACGGACACGAGAAATTC 57.127 42.857 0.00 0.00 44.60 2.17
45 46 4.142556 ACAAACAAACGGACACGAGAAATT 60.143 37.500 0.00 0.00 44.60 1.82
46 47 3.375922 ACAAACAAACGGACACGAGAAAT 59.624 39.130 0.00 0.00 44.60 2.17
47 48 2.743126 ACAAACAAACGGACACGAGAAA 59.257 40.909 0.00 0.00 44.60 2.52
48 49 2.094575 CACAAACAAACGGACACGAGAA 59.905 45.455 0.00 0.00 44.60 2.87
49 50 1.661617 CACAAACAAACGGACACGAGA 59.338 47.619 0.00 0.00 44.60 4.04
50 51 1.395608 ACACAAACAAACGGACACGAG 59.604 47.619 0.00 0.00 44.60 4.18
51 52 1.128878 CACACAAACAAACGGACACGA 59.871 47.619 0.00 0.00 44.60 4.35
53 54 2.160813 AGTCACACAAACAAACGGACAC 59.839 45.455 0.00 0.00 0.00 3.67
54 55 2.428491 AGTCACACAAACAAACGGACA 58.572 42.857 0.00 0.00 0.00 4.02
55 56 3.866910 TCTAGTCACACAAACAAACGGAC 59.133 43.478 0.00 0.00 0.00 4.79
56 57 4.126208 TCTAGTCACACAAACAAACGGA 57.874 40.909 0.00 0.00 0.00 4.69
57 58 4.868450 TTCTAGTCACACAAACAAACGG 57.132 40.909 0.00 0.00 0.00 4.44
58 59 6.413818 GGATTTTCTAGTCACACAAACAAACG 59.586 38.462 0.00 0.00 0.00 3.60
59 60 6.413818 CGGATTTTCTAGTCACACAAACAAAC 59.586 38.462 0.00 0.00 0.00 2.93
60 61 6.094325 ACGGATTTTCTAGTCACACAAACAAA 59.906 34.615 0.00 0.00 0.00 2.83
61 62 5.587043 ACGGATTTTCTAGTCACACAAACAA 59.413 36.000 0.00 0.00 0.00 2.83
62 63 5.120399 ACGGATTTTCTAGTCACACAAACA 58.880 37.500 0.00 0.00 0.00 2.83
63 64 5.668558 ACGGATTTTCTAGTCACACAAAC 57.331 39.130 0.00 0.00 0.00 2.93
64 65 5.403166 CGTACGGATTTTCTAGTCACACAAA 59.597 40.000 7.57 0.00 0.00 2.83
65 66 4.919168 CGTACGGATTTTCTAGTCACACAA 59.081 41.667 7.57 0.00 0.00 3.33
66 67 4.478699 CGTACGGATTTTCTAGTCACACA 58.521 43.478 7.57 0.00 0.00 3.72
67 68 3.855950 CCGTACGGATTTTCTAGTCACAC 59.144 47.826 30.64 0.00 37.50 3.82
68 69 3.119388 CCCGTACGGATTTTCTAGTCACA 60.119 47.826 35.41 0.00 37.50 3.58
69 70 3.442100 CCCGTACGGATTTTCTAGTCAC 58.558 50.000 35.41 0.00 37.50 3.67
70 71 2.159198 GCCCGTACGGATTTTCTAGTCA 60.159 50.000 35.41 0.00 37.50 3.41
71 72 2.159198 TGCCCGTACGGATTTTCTAGTC 60.159 50.000 35.41 11.96 37.50 2.59
72 73 1.826720 TGCCCGTACGGATTTTCTAGT 59.173 47.619 35.41 0.00 37.50 2.57
73 74 2.589798 TGCCCGTACGGATTTTCTAG 57.410 50.000 35.41 16.60 37.50 2.43
74 75 3.199677 CATTGCCCGTACGGATTTTCTA 58.800 45.455 35.41 14.70 37.50 2.10
75 76 2.014128 CATTGCCCGTACGGATTTTCT 58.986 47.619 35.41 11.65 37.50 2.52
76 77 1.533129 GCATTGCCCGTACGGATTTTC 60.533 52.381 35.41 17.52 37.50 2.29
77 78 0.454196 GCATTGCCCGTACGGATTTT 59.546 50.000 35.41 14.36 37.50 1.82
78 79 0.678366 TGCATTGCCCGTACGGATTT 60.678 50.000 35.41 13.99 37.50 2.17
79 80 1.078072 TGCATTGCCCGTACGGATT 60.078 52.632 35.41 13.63 37.50 3.01
80 81 1.817941 GTGCATTGCCCGTACGGAT 60.818 57.895 35.41 18.26 37.50 4.18
81 82 2.435234 GTGCATTGCCCGTACGGA 60.435 61.111 35.41 16.61 37.50 4.69
82 83 1.653094 AATGTGCATTGCCCGTACGG 61.653 55.000 27.68 27.68 0.00 4.02
83 84 0.248054 GAATGTGCATTGCCCGTACG 60.248 55.000 8.69 8.69 0.00 3.67
84 85 0.808125 TGAATGTGCATTGCCCGTAC 59.192 50.000 6.12 0.00 0.00 3.67
85 86 1.761449 ATGAATGTGCATTGCCCGTA 58.239 45.000 6.12 0.00 0.00 4.02
86 87 1.761449 TATGAATGTGCATTGCCCGT 58.239 45.000 6.12 0.00 0.00 5.28
87 88 3.374220 AATATGAATGTGCATTGCCCG 57.626 42.857 6.12 0.00 0.00 6.13
88 89 5.464168 GTCTAATATGAATGTGCATTGCCC 58.536 41.667 6.12 0.00 0.00 5.36
89 90 5.149273 CGTCTAATATGAATGTGCATTGCC 58.851 41.667 6.12 0.00 0.00 4.52
90 91 5.149273 CCGTCTAATATGAATGTGCATTGC 58.851 41.667 0.46 0.46 0.00 3.56
91 92 6.304356 ACCGTCTAATATGAATGTGCATTG 57.696 37.500 1.77 0.00 0.00 2.82
92 93 9.890629 ATATACCGTCTAATATGAATGTGCATT 57.109 29.630 0.00 0.00 0.00 3.56
93 94 9.890629 AATATACCGTCTAATATGAATGTGCAT 57.109 29.630 0.00 0.00 0.00 3.96
101 102 9.850628 GTGCAACTAATATACCGTCTAATATGA 57.149 33.333 0.00 0.00 0.00 2.15
102 103 9.084164 GGTGCAACTAATATACCGTCTAATATG 57.916 37.037 0.00 0.00 36.74 1.78
103 104 9.032624 AGGTGCAACTAATATACCGTCTAATAT 57.967 33.333 0.00 0.00 36.55 1.28
104 105 8.413309 AGGTGCAACTAATATACCGTCTAATA 57.587 34.615 0.00 0.00 36.55 0.98
105 106 7.299246 AGGTGCAACTAATATACCGTCTAAT 57.701 36.000 0.00 0.00 36.55 1.73
106 107 6.720112 AGGTGCAACTAATATACCGTCTAA 57.280 37.500 0.00 0.00 36.55 2.10
107 108 6.432162 CCTAGGTGCAACTAATATACCGTCTA 59.568 42.308 13.56 0.00 36.55 2.59
108 109 5.243283 CCTAGGTGCAACTAATATACCGTCT 59.757 44.000 13.56 0.00 36.55 4.18
109 110 5.010415 ACCTAGGTGCAACTAATATACCGTC 59.990 44.000 15.42 0.00 36.55 4.79
110 111 4.897670 ACCTAGGTGCAACTAATATACCGT 59.102 41.667 15.42 0.00 36.55 4.83
111 112 5.464030 ACCTAGGTGCAACTAATATACCG 57.536 43.478 15.42 0.00 36.55 4.02
112 113 6.014840 TGCTACCTAGGTGCAACTAATATACC 60.015 42.308 26.68 0.92 36.74 2.73
113 114 6.989659 TGCTACCTAGGTGCAACTAATATAC 58.010 40.000 26.68 3.55 36.74 1.47
114 115 7.792364 ATGCTACCTAGGTGCAACTAATATA 57.208 36.000 30.07 13.21 36.40 0.86
115 116 6.688073 ATGCTACCTAGGTGCAACTAATAT 57.312 37.500 30.07 16.66 36.40 1.28
116 117 7.792364 ATATGCTACCTAGGTGCAACTAATA 57.208 36.000 30.07 21.59 36.40 0.98
117 118 6.688073 ATATGCTACCTAGGTGCAACTAAT 57.312 37.500 30.07 20.58 36.40 1.73
118 119 6.494666 AATATGCTACCTAGGTGCAACTAA 57.505 37.500 30.07 20.41 36.40 2.24
119 120 7.792364 ATAATATGCTACCTAGGTGCAACTA 57.208 36.000 30.07 22.58 36.40 2.24
120 121 6.688073 ATAATATGCTACCTAGGTGCAACT 57.312 37.500 30.07 21.59 36.40 3.16
121 122 7.228706 ACAAATAATATGCTACCTAGGTGCAAC 59.771 37.037 30.07 16.74 36.40 4.17
122 123 7.228507 CACAAATAATATGCTACCTAGGTGCAA 59.771 37.037 30.07 22.33 36.40 4.08
123 124 6.710295 CACAAATAATATGCTACCTAGGTGCA 59.290 38.462 29.15 29.15 36.90 4.57
124 125 6.710744 ACACAAATAATATGCTACCTAGGTGC 59.289 38.462 25.33 23.45 0.00 5.01
125 126 7.173218 CCACACAAATAATATGCTACCTAGGTG 59.827 40.741 25.33 14.94 0.00 4.00
126 127 7.147373 ACCACACAAATAATATGCTACCTAGGT 60.147 37.037 20.57 20.57 0.00 3.08
127 128 7.224297 ACCACACAAATAATATGCTACCTAGG 58.776 38.462 7.41 7.41 0.00 3.02
128 129 9.772973 TTACCACACAAATAATATGCTACCTAG 57.227 33.333 0.00 0.00 0.00 3.02
130 131 9.640952 AATTACCACACAAATAATATGCTACCT 57.359 29.630 0.00 0.00 0.00 3.08
140 141 8.391859 CGCTACACATAATTACCACACAAATAA 58.608 33.333 0.00 0.00 0.00 1.40
141 142 7.466185 GCGCTACACATAATTACCACACAAATA 60.466 37.037 0.00 0.00 0.00 1.40
142 143 6.676943 GCGCTACACATAATTACCACACAAAT 60.677 38.462 0.00 0.00 0.00 2.32
143 144 5.391097 GCGCTACACATAATTACCACACAAA 60.391 40.000 0.00 0.00 0.00 2.83
144 145 4.093703 GCGCTACACATAATTACCACACAA 59.906 41.667 0.00 0.00 0.00 3.33
145 146 3.619483 GCGCTACACATAATTACCACACA 59.381 43.478 0.00 0.00 0.00 3.72
146 147 3.869246 AGCGCTACACATAATTACCACAC 59.131 43.478 8.99 0.00 0.00 3.82
147 148 3.868661 CAGCGCTACACATAATTACCACA 59.131 43.478 10.99 0.00 0.00 4.17
148 149 4.116961 TCAGCGCTACACATAATTACCAC 58.883 43.478 10.99 0.00 0.00 4.16
149 150 4.394439 TCAGCGCTACACATAATTACCA 57.606 40.909 10.99 0.00 0.00 3.25
150 151 5.728351 TTTCAGCGCTACACATAATTACC 57.272 39.130 10.99 0.00 0.00 2.85
151 152 7.186804 ACAATTTCAGCGCTACACATAATTAC 58.813 34.615 10.99 0.00 0.00 1.89
152 153 7.315247 ACAATTTCAGCGCTACACATAATTA 57.685 32.000 10.99 0.00 0.00 1.40
153 154 6.194796 ACAATTTCAGCGCTACACATAATT 57.805 33.333 10.99 7.12 0.00 1.40
154 155 5.818136 ACAATTTCAGCGCTACACATAAT 57.182 34.783 10.99 0.75 0.00 1.28
155 156 5.621197 AACAATTTCAGCGCTACACATAA 57.379 34.783 10.99 0.00 0.00 1.90
156 157 6.918892 ATAACAATTTCAGCGCTACACATA 57.081 33.333 10.99 0.00 0.00 2.29
157 158 5.818136 ATAACAATTTCAGCGCTACACAT 57.182 34.783 10.99 0.00 0.00 3.21
158 159 5.621197 AATAACAATTTCAGCGCTACACA 57.379 34.783 10.99 0.00 0.00 3.72
159 160 5.286082 CCAAATAACAATTTCAGCGCTACAC 59.714 40.000 10.99 0.00 0.00 2.90
160 161 5.048364 ACCAAATAACAATTTCAGCGCTACA 60.048 36.000 10.99 0.00 0.00 2.74
161 162 5.399013 ACCAAATAACAATTTCAGCGCTAC 58.601 37.500 10.99 0.00 0.00 3.58
162 163 5.637006 ACCAAATAACAATTTCAGCGCTA 57.363 34.783 10.99 0.00 0.00 4.26
163 164 4.519540 ACCAAATAACAATTTCAGCGCT 57.480 36.364 2.64 2.64 0.00 5.92
164 165 6.033341 TCATACCAAATAACAATTTCAGCGC 58.967 36.000 0.00 0.00 0.00 5.92
165 166 9.897744 ATATCATACCAAATAACAATTTCAGCG 57.102 29.630 0.00 0.00 0.00 5.18
175 176 9.594038 CGTGCAGTTAATATCATACCAAATAAC 57.406 33.333 0.00 0.00 0.00 1.89
176 177 8.286800 GCGTGCAGTTAATATCATACCAAATAA 58.713 33.333 0.00 0.00 0.00 1.40
181 182 4.749598 CAGCGTGCAGTTAATATCATACCA 59.250 41.667 0.00 0.00 0.00 3.25
186 187 3.305897 CGTTCAGCGTGCAGTTAATATCA 59.694 43.478 0.00 0.00 35.54 2.15
187 188 3.841372 GCGTTCAGCGTGCAGTTAATATC 60.841 47.826 0.00 0.00 43.66 1.63
209 211 0.110238 CCAATGGTGAACGCTCAACG 60.110 55.000 0.00 0.00 42.74 4.10
218 220 1.746861 CGCAGGCTATCCAATGGTGAA 60.747 52.381 0.00 0.00 33.74 3.18
222 224 0.179048 TGACGCAGGCTATCCAATGG 60.179 55.000 0.00 0.00 33.74 3.16
227 229 0.106708 TCCAATGACGCAGGCTATCC 59.893 55.000 0.00 0.00 0.00 2.59
230 232 0.179048 CCATCCAATGACGCAGGCTA 60.179 55.000 0.00 0.00 0.00 3.93
231 233 1.452651 CCATCCAATGACGCAGGCT 60.453 57.895 0.00 0.00 0.00 4.58
232 234 2.484062 CCCATCCAATGACGCAGGC 61.484 63.158 0.00 0.00 0.00 4.85
233 235 2.484062 GCCCATCCAATGACGCAGG 61.484 63.158 0.00 0.00 0.00 4.85
235 237 1.631071 TAGGCCCATCCAATGACGCA 61.631 55.000 0.00 0.00 37.29 5.24
236 238 0.886490 CTAGGCCCATCCAATGACGC 60.886 60.000 0.00 0.00 37.29 5.19
237 239 0.469917 ACTAGGCCCATCCAATGACG 59.530 55.000 0.00 0.00 37.29 4.35
238 240 2.689983 CAAACTAGGCCCATCCAATGAC 59.310 50.000 0.00 0.00 37.29 3.06
239 241 2.580322 TCAAACTAGGCCCATCCAATGA 59.420 45.455 0.00 0.00 37.29 2.57
246 249 3.520623 GCCATCAAACTAGGCCCAT 57.479 52.632 0.00 0.00 42.58 4.00
253 256 3.950397 ACAAATCTCGGCCATCAAACTA 58.050 40.909 2.24 0.00 0.00 2.24
254 257 2.795329 ACAAATCTCGGCCATCAAACT 58.205 42.857 2.24 0.00 0.00 2.66
282 285 6.382919 TGTATATATAAGGACCAAAGGGGC 57.617 41.667 0.00 0.00 43.93 5.80
291 294 9.890629 TGCATCCAAGATTGTATATATAAGGAC 57.109 33.333 0.00 0.00 0.00 3.85
293 296 9.896645 ACTGCATCCAAGATTGTATATATAAGG 57.103 33.333 0.00 0.00 0.00 2.69
295 298 9.671279 CCACTGCATCCAAGATTGTATATATAA 57.329 33.333 0.00 0.00 0.00 0.98
296 299 9.045745 TCCACTGCATCCAAGATTGTATATATA 57.954 33.333 0.00 0.00 0.00 0.86
298 301 7.315066 TCCACTGCATCCAAGATTGTATATA 57.685 36.000 0.00 0.00 0.00 0.86
300 303 5.628797 TCCACTGCATCCAAGATTGTATA 57.371 39.130 0.00 0.00 0.00 1.47
301 304 4.508551 TCCACTGCATCCAAGATTGTAT 57.491 40.909 0.00 0.00 0.00 2.29
302 305 3.998913 TCCACTGCATCCAAGATTGTA 57.001 42.857 0.00 0.00 0.00 2.41
303 306 2.885135 TCCACTGCATCCAAGATTGT 57.115 45.000 0.00 0.00 0.00 2.71
304 307 3.284617 TCATCCACTGCATCCAAGATTG 58.715 45.455 0.00 0.00 0.00 2.67
305 308 3.657398 TCATCCACTGCATCCAAGATT 57.343 42.857 0.00 0.00 0.00 2.40
352 355 3.000041 GCGATGTTCCTTGTGTCACATA 59.000 45.455 6.48 0.00 29.81 2.29
372 375 1.675641 ATGCAGAGGAACAACCGGC 60.676 57.895 0.00 0.00 44.74 6.13
375 378 1.068055 CAAGCATGCAGAGGAACAACC 60.068 52.381 21.98 0.00 39.35 3.77
421 434 3.067601 TCTGCGTAGAGACAGTTTGAACA 59.932 43.478 0.00 0.00 35.37 3.18
422 435 3.639538 TCTGCGTAGAGACAGTTTGAAC 58.360 45.455 0.00 0.00 35.37 3.18
423 436 4.521130 ATCTGCGTAGAGACAGTTTGAA 57.479 40.909 9.62 0.00 36.14 2.69
424 437 5.399858 GTTATCTGCGTAGAGACAGTTTGA 58.600 41.667 9.62 0.00 36.14 2.69
425 438 4.563184 GGTTATCTGCGTAGAGACAGTTTG 59.437 45.833 9.62 0.00 36.14 2.93
427 440 4.017808 AGGTTATCTGCGTAGAGACAGTT 58.982 43.478 9.62 0.00 36.14 3.16
428 441 3.378742 CAGGTTATCTGCGTAGAGACAGT 59.621 47.826 9.62 0.00 36.14 3.55
429 442 3.628032 TCAGGTTATCTGCGTAGAGACAG 59.372 47.826 9.62 7.13 43.06 3.51
432 445 4.887655 TGAATCAGGTTATCTGCGTAGAGA 59.112 41.667 9.62 0.56 43.06 3.10
433 446 5.188327 TGAATCAGGTTATCTGCGTAGAG 57.812 43.478 9.62 0.00 43.06 2.43
435 448 5.777802 AGATGAATCAGGTTATCTGCGTAG 58.222 41.667 0.00 0.00 43.06 3.51
437 450 4.679373 AGATGAATCAGGTTATCTGCGT 57.321 40.909 0.00 0.00 43.06 5.24
439 452 4.577693 TGCAAGATGAATCAGGTTATCTGC 59.422 41.667 0.00 0.00 43.06 4.26
440 453 6.688637 TTGCAAGATGAATCAGGTTATCTG 57.311 37.500 0.00 0.00 44.68 2.90
441 454 7.058525 TGATTGCAAGATGAATCAGGTTATCT 58.941 34.615 4.94 0.00 34.40 1.98
442 455 7.268199 TGATTGCAAGATGAATCAGGTTATC 57.732 36.000 4.94 0.00 34.40 1.75
443 456 7.273320 CTGATTGCAAGATGAATCAGGTTAT 57.727 36.000 14.86 0.00 46.36 1.89
444 457 6.688637 CTGATTGCAAGATGAATCAGGTTA 57.311 37.500 14.86 0.00 46.36 2.85
445 458 5.578005 CTGATTGCAAGATGAATCAGGTT 57.422 39.130 14.86 0.00 46.36 3.50
449 462 5.005094 TGACACTGATTGCAAGATGAATCA 58.995 37.500 4.94 1.36 36.46 2.57
450 463 5.448768 CCTGACACTGATTGCAAGATGAATC 60.449 44.000 4.94 0.00 0.00 2.52
452 465 3.754850 CCTGACACTGATTGCAAGATGAA 59.245 43.478 4.94 0.00 0.00 2.57
453 466 3.008266 TCCTGACACTGATTGCAAGATGA 59.992 43.478 4.94 0.00 0.00 2.92
455 468 3.708403 TCCTGACACTGATTGCAAGAT 57.292 42.857 4.94 0.00 0.00 2.40
457 470 3.340928 TGATCCTGACACTGATTGCAAG 58.659 45.455 4.94 0.00 0.00 4.01
458 471 3.421919 TGATCCTGACACTGATTGCAA 57.578 42.857 0.00 0.00 0.00 4.08
460 473 3.603532 TCTTGATCCTGACACTGATTGC 58.396 45.455 0.00 0.00 0.00 3.56
461 474 5.391736 GCTTTCTTGATCCTGACACTGATTG 60.392 44.000 0.00 0.00 0.00 2.67
464 477 3.326006 AGCTTTCTTGATCCTGACACTGA 59.674 43.478 0.00 0.00 0.00 3.41
465 478 3.436015 CAGCTTTCTTGATCCTGACACTG 59.564 47.826 0.00 0.00 0.00 3.66
466 479 3.672808 CAGCTTTCTTGATCCTGACACT 58.327 45.455 0.00 0.00 0.00 3.55
467 480 2.161211 GCAGCTTTCTTGATCCTGACAC 59.839 50.000 0.00 0.00 0.00 3.67
468 481 2.224597 TGCAGCTTTCTTGATCCTGACA 60.225 45.455 0.00 0.00 0.00 3.58
469 482 2.419324 CTGCAGCTTTCTTGATCCTGAC 59.581 50.000 0.00 0.00 0.00 3.51
470 483 2.708051 CTGCAGCTTTCTTGATCCTGA 58.292 47.619 0.00 0.00 0.00 3.86
471 484 1.132643 GCTGCAGCTTTCTTGATCCTG 59.867 52.381 31.33 0.00 38.21 3.86
472 485 1.461559 GCTGCAGCTTTCTTGATCCT 58.538 50.000 31.33 0.00 38.21 3.24
473 486 0.455005 GGCTGCAGCTTTCTTGATCC 59.545 55.000 35.82 13.26 41.70 3.36
474 487 1.132643 CTGGCTGCAGCTTTCTTGATC 59.867 52.381 35.82 17.61 41.70 2.92
475 488 1.174783 CTGGCTGCAGCTTTCTTGAT 58.825 50.000 35.82 0.00 41.70 2.57
476 489 0.109153 TCTGGCTGCAGCTTTCTTGA 59.891 50.000 35.82 21.01 41.70 3.02
477 490 1.132643 GATCTGGCTGCAGCTTTCTTG 59.867 52.381 35.82 19.31 41.70 3.02
478 491 1.004511 AGATCTGGCTGCAGCTTTCTT 59.995 47.619 35.82 18.33 41.70 2.52
479 492 0.619505 AGATCTGGCTGCAGCTTTCT 59.380 50.000 35.82 26.56 41.70 2.52
480 493 0.733729 CAGATCTGGCTGCAGCTTTC 59.266 55.000 35.82 25.03 41.70 2.62
481 494 0.037877 ACAGATCTGGCTGCAGCTTT 59.962 50.000 35.82 19.02 39.51 3.51
482 495 0.907486 TACAGATCTGGCTGCAGCTT 59.093 50.000 35.82 19.37 39.51 3.74
483 496 0.464870 CTACAGATCTGGCTGCAGCT 59.535 55.000 35.82 18.48 39.51 4.24
484 497 0.463204 TCTACAGATCTGGCTGCAGC 59.537 55.000 30.88 30.88 39.51 5.25
485 498 1.535649 CGTCTACAGATCTGGCTGCAG 60.536 57.143 26.08 10.11 39.51 4.41
486 499 0.457443 CGTCTACAGATCTGGCTGCA 59.543 55.000 26.08 5.52 39.51 4.41
487 500 0.873743 GCGTCTACAGATCTGGCTGC 60.874 60.000 26.08 17.33 39.51 5.25
488 501 0.593518 CGCGTCTACAGATCTGGCTG 60.594 60.000 26.08 15.01 41.63 4.85
489 502 0.748367 TCGCGTCTACAGATCTGGCT 60.748 55.000 26.08 9.29 34.19 4.75
490 503 0.592754 GTCGCGTCTACAGATCTGGC 60.593 60.000 26.08 17.45 34.19 4.85
491 504 0.733150 TGTCGCGTCTACAGATCTGG 59.267 55.000 26.08 9.99 34.19 3.86
492 505 1.130561 TGTGTCGCGTCTACAGATCTG 59.869 52.381 21.37 21.37 0.00 2.90
493 506 1.398739 CTGTGTCGCGTCTACAGATCT 59.601 52.381 24.82 0.00 43.35 2.75
494 507 1.397343 TCTGTGTCGCGTCTACAGATC 59.603 52.381 26.41 8.12 44.10 2.75
495 508 1.450025 TCTGTGTCGCGTCTACAGAT 58.550 50.000 26.41 0.00 44.10 2.90
496 509 2.922779 TCTGTGTCGCGTCTACAGA 58.077 52.632 26.41 26.41 46.05 3.41
497 510 3.400505 TTATCTGTGTCGCGTCTACAG 57.599 47.619 23.82 23.82 42.34 2.74
498 511 3.495193 GTTTATCTGTGTCGCGTCTACA 58.505 45.455 5.77 9.23 0.00 2.74
499 512 2.525096 CGTTTATCTGTGTCGCGTCTAC 59.475 50.000 5.77 4.55 0.00 2.59
500 513 2.476686 CCGTTTATCTGTGTCGCGTCTA 60.477 50.000 5.77 0.00 0.00 2.59
501 514 1.614385 CGTTTATCTGTGTCGCGTCT 58.386 50.000 5.77 0.00 0.00 4.18
502 515 0.638746 CCGTTTATCTGTGTCGCGTC 59.361 55.000 5.77 0.00 0.00 5.19
503 516 0.038892 ACCGTTTATCTGTGTCGCGT 60.039 50.000 5.77 0.00 0.00 6.01
504 517 0.365523 CACCGTTTATCTGTGTCGCG 59.634 55.000 0.00 0.00 0.00 5.87
505 518 1.425412 ACACCGTTTATCTGTGTCGC 58.575 50.000 0.00 0.00 39.62 5.19
506 519 3.491639 TGAAACACCGTTTATCTGTGTCG 59.508 43.478 0.00 0.00 42.12 4.35
507 520 4.510340 AGTGAAACACCGTTTATCTGTGTC 59.490 41.667 0.00 0.00 42.12 3.67
508 521 4.272504 CAGTGAAACACCGTTTATCTGTGT 59.727 41.667 11.78 0.00 44.17 3.72
509 522 4.272504 ACAGTGAAACACCGTTTATCTGTG 59.727 41.667 19.06 0.00 41.43 3.66
510 523 4.272504 CACAGTGAAACACCGTTTATCTGT 59.727 41.667 16.36 16.36 41.43 3.41
511 524 4.772434 CACAGTGAAACACCGTTTATCTG 58.228 43.478 15.52 15.52 41.43 2.90
512 525 3.250040 GCACAGTGAAACACCGTTTATCT 59.750 43.478 4.15 0.00 41.43 1.98
513 526 3.250040 AGCACAGTGAAACACCGTTTATC 59.750 43.478 4.15 0.00 41.43 1.75
514 527 3.211045 AGCACAGTGAAACACCGTTTAT 58.789 40.909 4.15 0.00 41.43 1.40
515 528 2.634600 AGCACAGTGAAACACCGTTTA 58.365 42.857 4.15 0.00 41.43 2.01
516 529 1.459450 AGCACAGTGAAACACCGTTT 58.541 45.000 4.15 0.00 41.43 3.60
517 530 1.400494 GAAGCACAGTGAAACACCGTT 59.600 47.619 4.15 0.00 41.43 4.44
518 531 1.014352 GAAGCACAGTGAAACACCGT 58.986 50.000 4.15 0.00 41.43 4.83
519 532 1.013596 TGAAGCACAGTGAAACACCG 58.986 50.000 4.15 0.00 41.43 4.94
520 533 2.163412 TGTTGAAGCACAGTGAAACACC 59.837 45.455 4.15 0.00 41.43 4.16
521 534 3.126858 TCTGTTGAAGCACAGTGAAACAC 59.873 43.478 4.15 0.00 44.10 3.32
538 635 1.412710 TCTTGCAGTCGTTCCTCTGTT 59.587 47.619 0.00 0.00 34.57 3.16
555 652 7.016661 TGGAAGAGAGTAGATTTCCTGTTTCTT 59.983 37.037 4.03 0.00 39.80 2.52
556 653 6.498651 TGGAAGAGAGTAGATTTCCTGTTTCT 59.501 38.462 4.03 0.00 39.80 2.52
558 655 6.688073 TGGAAGAGAGTAGATTTCCTGTTT 57.312 37.500 4.03 0.00 39.80 2.83
575 674 6.857437 TCTCTGTATTCATCTGTTGGAAGA 57.143 37.500 0.00 0.00 0.00 2.87
577 676 8.690203 TTTTTCTCTGTATTCATCTGTTGGAA 57.310 30.769 0.00 0.00 0.00 3.53
578 677 8.868522 ATTTTTCTCTGTATTCATCTGTTGGA 57.131 30.769 0.00 0.00 0.00 3.53
580 679 8.857216 GCAATTTTTCTCTGTATTCATCTGTTG 58.143 33.333 0.00 0.00 0.00 3.33
581 680 8.800332 AGCAATTTTTCTCTGTATTCATCTGTT 58.200 29.630 0.00 0.00 0.00 3.16
623 722 1.682257 GAGGAGGCACAAAGCTCCT 59.318 57.895 6.66 6.66 46.64 3.69
628 727 0.676151 GCAGAGGAGGAGGCACAAAG 60.676 60.000 0.00 0.00 0.00 2.77
635 734 4.154347 GCACGGCAGAGGAGGAGG 62.154 72.222 0.00 0.00 0.00 4.30
644 743 3.982424 GATTTCGCGTGCACGGCAG 62.982 63.158 37.47 23.52 40.08 4.85
648 747 1.645236 CATCGATTTCGCGTGCACG 60.645 57.895 34.01 34.01 43.27 5.34
692 791 2.431057 AGATTACCTAGTTGCCCGTCAG 59.569 50.000 0.00 0.00 0.00 3.51
694 793 2.167900 ACAGATTACCTAGTTGCCCGTC 59.832 50.000 0.00 0.00 0.00 4.79
695 794 2.185387 ACAGATTACCTAGTTGCCCGT 58.815 47.619 0.00 0.00 0.00 5.28
696 795 2.936498 CAACAGATTACCTAGTTGCCCG 59.064 50.000 0.00 0.00 35.51 6.13
700 799 4.872691 CCTCAGCAACAGATTACCTAGTTG 59.127 45.833 0.00 0.00 43.04 3.16
701 800 4.624125 GCCTCAGCAACAGATTACCTAGTT 60.624 45.833 0.00 0.00 39.53 2.24
703 802 3.462021 GCCTCAGCAACAGATTACCTAG 58.538 50.000 0.00 0.00 39.53 3.02
704 803 3.543680 GCCTCAGCAACAGATTACCTA 57.456 47.619 0.00 0.00 39.53 3.08
705 804 2.409948 GCCTCAGCAACAGATTACCT 57.590 50.000 0.00 0.00 39.53 3.08
753 853 3.706373 CACCACGACCCAGGGAGG 61.706 72.222 14.54 10.89 37.03 4.30
758 858 3.159858 AACGACCACCACGACCCAG 62.160 63.158 0.00 0.00 34.70 4.45
775 897 7.362834 CCATTTAGTGGCAATCAATGTACTGAA 60.363 37.037 17.43 0.00 42.12 3.02
827 949 4.937193 AGCTCAGCTGCACATCTC 57.063 55.556 9.47 0.00 37.57 2.75
842 964 3.123620 CGGAGCAGAAGCCACAGC 61.124 66.667 0.00 0.00 43.56 4.40
843 965 1.447489 CTCGGAGCAGAAGCCACAG 60.447 63.158 0.00 0.00 43.56 3.66
844 966 2.659016 CTCGGAGCAGAAGCCACA 59.341 61.111 0.00 0.00 43.56 4.17
845 967 2.125350 CCTCGGAGCAGAAGCCAC 60.125 66.667 0.00 0.00 43.56 5.01
846 968 2.604686 ACCTCGGAGCAGAAGCCA 60.605 61.111 0.00 0.00 43.56 4.75
847 969 2.125350 CACCTCGGAGCAGAAGCC 60.125 66.667 0.00 0.00 43.56 4.35
848 970 2.817396 GCACCTCGGAGCAGAAGC 60.817 66.667 0.00 0.00 42.56 3.86
849 971 2.507992 CGCACCTCGGAGCAGAAG 60.508 66.667 6.21 0.00 33.78 2.85
850 972 2.989253 TCGCACCTCGGAGCAGAA 60.989 61.111 6.21 0.00 39.05 3.02
851 973 3.749064 GTCGCACCTCGGAGCAGA 61.749 66.667 6.21 1.90 39.05 4.26
852 974 4.803426 GGTCGCACCTCGGAGCAG 62.803 72.222 6.21 0.00 39.05 4.24
874 1037 3.071232 GCGGTTTAATTGGGGCGGG 62.071 63.158 0.00 0.00 0.00 6.13
943 1106 4.087892 CTCTGGTGGTGCGGAGGG 62.088 72.222 0.00 0.00 0.00 4.30
977 1140 1.079543 TCCGCTGCTGCTTCTTCTC 60.080 57.895 14.03 0.00 36.97 2.87
1089 1260 2.808919 AGAACTCGATGTGGAAGGAGA 58.191 47.619 0.00 0.00 0.00 3.71
1098 1269 5.105187 TCCTCATCAATCAAGAACTCGATGT 60.105 40.000 0.00 0.00 33.59 3.06
1699 1933 0.250295 TTCTAACAGCAACAGCGGCT 60.250 50.000 0.00 0.00 43.77 5.52
2125 2408 2.398588 TGACTCTGGCAACCTATAGGG 58.601 52.381 22.91 7.18 40.27 3.53
2150 2433 7.330700 CACATTTTAACAAACCATGGACCATAC 59.669 37.037 21.47 0.00 0.00 2.39
2187 2470 7.233632 TCATTTCAATGAAGGGATCGGATAAT 58.766 34.615 0.00 0.00 42.11 1.28
2189 2472 6.186420 TCATTTCAATGAAGGGATCGGATA 57.814 37.500 0.00 0.00 42.11 2.59
2208 2491 6.815142 GCTGCAGAATTTACAATTCCTTCATT 59.185 34.615 20.43 0.00 0.00 2.57
2214 2497 6.158598 TGAAAGCTGCAGAATTTACAATTCC 58.841 36.000 20.43 4.49 0.00 3.01
2219 2502 4.821260 TGTCTGAAAGCTGCAGAATTTACA 59.179 37.500 20.43 14.66 43.39 2.41
2241 2524 7.362747 CCCAACACTAGAGTAACTAACTAGGTG 60.363 44.444 0.00 0.00 39.07 4.00
2489 2834 0.329931 TGATGCCGGTTGGGTACATT 59.670 50.000 1.90 0.00 38.44 2.71
2614 2959 8.867112 ATGAAGAAGCATAAATTAGCAACATG 57.133 30.769 0.00 0.00 0.00 3.21
2641 2988 2.937469 TGCCTGCCATTGTAAATTCG 57.063 45.000 0.00 0.00 0.00 3.34
2822 3185 7.040062 CCTGTGTCCAAAGTTAATTTATCCACA 60.040 37.037 0.00 0.00 33.39 4.17
2843 3206 2.425143 ACATATGTGGGCTTCCTGTG 57.575 50.000 7.78 0.00 0.00 3.66
2930 3303 6.889177 TGATATGCCACCAAATCTTGTAAGAA 59.111 34.615 0.00 0.00 38.77 2.52
2975 3348 8.352201 CAAGGACATACTTTTGATTTTCTGACA 58.648 33.333 0.00 0.00 0.00 3.58
2997 3370 2.281761 AGCTGGTGCCGAACAAGG 60.282 61.111 0.00 0.00 40.80 3.61
3015 3388 7.041098 ACACAAGAGTTTGATGATCCTAAACAC 60.041 37.037 14.83 10.51 36.91 3.32
3047 3421 5.633830 CTAATTCAGCAACAACCACATCT 57.366 39.130 0.00 0.00 0.00 2.90
3142 3516 4.018415 ACATCTGGTAGGTACATTTTGGCT 60.018 41.667 0.00 0.00 0.00 4.75
3144 3518 5.745227 AGACATCTGGTAGGTACATTTTGG 58.255 41.667 0.00 0.00 0.00 3.28
3151 3525 7.820578 ATAAGTGTAGACATCTGGTAGGTAC 57.179 40.000 0.00 0.00 0.00 3.34
3168 3542 9.840427 CTCGGAAATATTGTTCAAAATAAGTGT 57.160 29.630 0.00 0.00 0.00 3.55
3190 3567 1.473434 GGTATTCCTTCTGCACCTCGG 60.473 57.143 0.00 0.00 0.00 4.63
3191 3568 1.207089 TGGTATTCCTTCTGCACCTCG 59.793 52.381 0.00 0.00 34.23 4.63
3227 3604 6.387041 AAAAGGCTTATATTTAGGAACGGC 57.613 37.500 0.00 0.00 0.00 5.68
3276 3653 7.810658 AGTGTAGATTCACTTATTTTGCTGTG 58.189 34.615 0.00 0.00 44.92 3.66
3277 3654 7.880195 AGAGTGTAGATTCACTTATTTTGCTGT 59.120 33.333 0.98 0.00 46.81 4.40
3278 3655 8.261492 AGAGTGTAGATTCACTTATTTTGCTG 57.739 34.615 0.98 0.00 46.81 4.41
3315 3692 9.383519 CCTCCGTTTATAAATGCAGATGTATAT 57.616 33.333 9.55 0.00 0.00 0.86
3320 3697 5.063204 TCCCTCCGTTTATAAATGCAGATG 58.937 41.667 9.55 1.90 0.00 2.90
3321 3698 5.163195 ACTCCCTCCGTTTATAAATGCAGAT 60.163 40.000 9.55 0.00 0.00 2.90
3322 3699 4.163458 ACTCCCTCCGTTTATAAATGCAGA 59.837 41.667 9.55 3.75 0.00 4.26
3323 3700 4.451900 ACTCCCTCCGTTTATAAATGCAG 58.548 43.478 11.32 6.64 0.00 4.41
3326 3728 9.774413 AATTACTACTCCCTCCGTTTATAAATG 57.226 33.333 10.03 10.03 0.00 2.32
3332 3734 9.474313 TTTAGTAATTACTACTCCCTCCGTTTA 57.526 33.333 22.22 3.33 40.21 2.01
3376 3778 6.416455 TGCAATTCTTTCAATGTGTTCGTAAC 59.584 34.615 0.00 0.00 0.00 2.50
3392 3798 4.523943 TGTCAGTTATTGCCTGCAATTCTT 59.476 37.500 21.18 5.90 43.32 2.52
3442 3848 9.988815 CAGTTGTCTATACAATATAGGAGCTTT 57.011 33.333 0.00 0.00 46.84 3.51
3446 3905 8.128322 AGCCAGTTGTCTATACAATATAGGAG 57.872 38.462 0.00 0.00 46.84 3.69
3459 3918 0.909610 CCCCCAGAGCCAGTTGTCTA 60.910 60.000 0.00 0.00 0.00 2.59
3479 3951 1.132643 AGATGTACGACGTGGCTCTTC 59.867 52.381 11.56 6.45 0.00 2.87
3523 4004 4.395542 GCATGAGATCCAAGATCATAAGCC 59.604 45.833 0.00 0.00 32.51 4.35
3560 4041 1.135689 GCAGTCTATTTTGCCCACACG 60.136 52.381 0.00 0.00 34.28 4.49
3565 4046 2.659428 AGGATGCAGTCTATTTTGCCC 58.341 47.619 0.00 0.00 39.54 5.36
3684 4165 1.663379 TACGAGGCCGACATCACCAG 61.663 60.000 0.00 0.00 39.50 4.00
3733 4214 0.894835 ACGGAAATTGCATCAACCCC 59.105 50.000 0.00 0.00 0.00 4.95
3734 4215 1.818674 AGACGGAAATTGCATCAACCC 59.181 47.619 0.00 0.00 0.00 4.11
3735 4216 2.487762 TGAGACGGAAATTGCATCAACC 59.512 45.455 0.00 0.00 0.00 3.77
3737 4218 2.487762 GGTGAGACGGAAATTGCATCAA 59.512 45.455 0.00 0.00 0.00 2.57
3738 4219 2.083774 GGTGAGACGGAAATTGCATCA 58.916 47.619 0.00 0.00 0.00 3.07
3865 4352 2.151924 CGTTCACGATATGCGATGACAG 59.848 50.000 0.00 0.00 44.57 3.51
3868 4355 1.766069 CCGTTCACGATATGCGATGA 58.234 50.000 0.00 0.00 44.57 2.92
3873 4360 1.014352 AAAGGCCGTTCACGATATGC 58.986 50.000 0.00 0.00 43.02 3.14
3874 4361 2.006888 ACAAAGGCCGTTCACGATATG 58.993 47.619 0.00 0.00 43.02 1.78
3879 4366 0.110238 CATGACAAAGGCCGTTCACG 60.110 55.000 0.00 0.00 39.44 4.35
3881 4368 1.606668 GAACATGACAAAGGCCGTTCA 59.393 47.619 0.00 0.00 34.35 3.18
3883 4370 1.880027 GAGAACATGACAAAGGCCGTT 59.120 47.619 0.00 0.00 0.00 4.44
3888 4375 4.994852 TCTAAACGGAGAACATGACAAAGG 59.005 41.667 0.00 0.00 0.00 3.11
3892 4379 4.866508 ACTCTAAACGGAGAACATGACA 57.133 40.909 0.00 0.00 37.13 3.58
3893 4380 5.694910 TGAAACTCTAAACGGAGAACATGAC 59.305 40.000 0.00 0.00 37.13 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.