Multiple sequence alignment - TraesCS3D01G532200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G532200 chr3D 100.000 3515 0 0 1 3515 608334835 608331321 0.000000e+00 6492.0
1 TraesCS3D01G532200 chr3D 89.270 1370 106 13 1654 3001 608350950 608349600 0.000000e+00 1677.0
2 TraesCS3D01G532200 chr3D 90.595 521 47 2 999 1519 608422899 608423417 0.000000e+00 689.0
3 TraesCS3D01G532200 chr3D 87.901 405 43 2 1917 2315 608423781 608424185 4.110000e-129 472.0
4 TraesCS3D01G532200 chr3D 86.104 367 29 6 1559 1925 608423415 608423759 3.310000e-100 375.0
5 TraesCS3D01G532200 chr3D 87.291 299 20 6 3117 3412 608349267 608348984 3.380000e-85 326.0
6 TraesCS3D01G532200 chr3D 78.108 539 96 13 1014 1546 608420185 608420707 4.380000e-84 322.0
7 TraesCS3D01G532200 chr3D 78.873 355 52 10 437 770 580608776 580608424 5.910000e-53 219.0
8 TraesCS3D01G532200 chr3D 93.023 86 6 0 3430 3515 608348996 608348911 3.680000e-25 126.0
9 TraesCS3D01G532200 chr3D 97.260 73 2 0 3047 3119 608349593 608349521 1.320000e-24 124.0
10 TraesCS3D01G532200 chr3D 83.824 136 13 9 393 519 78010253 78010388 1.710000e-23 121.0
11 TraesCS3D01G532200 chr3D 97.500 40 1 0 1622 1661 608351652 608351613 6.300000e-08 69.4
12 TraesCS3D01G532200 chr3D 92.683 41 2 1 1295 1334 614648848 614648808 1.360000e-04 58.4
13 TraesCS3D01G532200 chr3A 91.639 2404 157 27 831 3203 740927888 740930278 0.000000e+00 3286.0
14 TraesCS3D01G532200 chr3A 80.964 415 47 12 2163 2556 740404107 740403704 2.050000e-77 300.0
15 TraesCS3D01G532200 chr3A 92.857 168 11 1 158 324 740912579 740912746 3.510000e-60 243.0
16 TraesCS3D01G532200 chr3B 92.450 2000 100 25 832 2788 818319230 818321221 0.000000e+00 2809.0
17 TraesCS3D01G532200 chr3B 84.891 1840 208 34 1003 2810 818158720 818156919 0.000000e+00 1794.0
18 TraesCS3D01G532200 chr3B 88.038 209 18 3 3310 3515 303338572 303338776 1.260000e-59 241.0
19 TraesCS3D01G532200 chr3B 83.486 218 30 4 602 815 462056048 462055833 7.700000e-47 198.0
20 TraesCS3D01G532200 chr3B 90.972 144 12 1 182 324 818292460 818292603 3.580000e-45 193.0
21 TraesCS3D01G532200 chr3B 80.377 265 41 9 516 770 351983570 351983833 1.290000e-44 191.0
22 TraesCS3D01G532200 chr3B 82.297 209 7 9 3310 3515 442333703 442333884 1.690000e-33 154.0
23 TraesCS3D01G532200 chr3B 89.091 110 7 4 402 506 128657801 128657692 7.920000e-27 132.0
24 TraesCS3D01G532200 chr3B 85.714 91 10 2 681 770 19740777 19740865 3.740000e-15 93.5
25 TraesCS3D01G532200 chr3B 86.441 59 4 4 14 70 714439058 714439114 1.050000e-05 62.1
26 TraesCS3D01G532200 chr6A 93.109 653 36 5 2499 3146 12222574 12223222 0.000000e+00 948.0
27 TraesCS3D01G532200 chr6A 82.246 276 34 11 500 769 99767135 99767401 1.270000e-54 224.0
28 TraesCS3D01G532200 chr6A 91.241 137 9 1 2350 2483 12215500 12215636 2.150000e-42 183.0
29 TraesCS3D01G532200 chr6A 89.831 118 10 1 3199 3316 328394384 328394269 2.190000e-32 150.0
30 TraesCS3D01G532200 chr6A 84.375 64 6 4 9 70 3398011 3398072 3.790000e-05 60.2
31 TraesCS3D01G532200 chr1D 80.115 347 54 10 432 769 65847284 65847624 9.750000e-61 244.0
32 TraesCS3D01G532200 chr1D 81.132 265 35 11 516 769 473782410 473782670 7.700000e-47 198.0
33 TraesCS3D01G532200 chr1D 86.916 107 12 1 3210 3316 451060747 451060643 6.160000e-23 119.0
34 TraesCS3D01G532200 chr1A 87.560 209 17 4 3310 3515 463934766 463934564 2.110000e-57 233.0
35 TraesCS3D01G532200 chr1A 86.290 124 10 7 393 510 391243302 391243424 1.020000e-25 128.0
36 TraesCS3D01G532200 chr7B 87.560 209 15 5 3310 3515 555514618 555514418 7.590000e-57 231.0
37 TraesCS3D01G532200 chr1B 87.081 209 18 4 3310 3515 181897125 181896923 9.820000e-56 228.0
38 TraesCS3D01G532200 chr1B 81.250 144 23 3 414 553 625990901 625991044 2.870000e-21 113.0
39 TraesCS3D01G532200 chr1B 94.872 39 1 1 33 70 533258441 533258403 3.790000e-05 60.2
40 TraesCS3D01G532200 chr1B 94.872 39 1 1 33 70 581649729 581649691 3.790000e-05 60.2
41 TraesCS3D01G532200 chr5B 87.081 209 14 6 3310 3515 545195768 545195966 1.270000e-54 224.0
42 TraesCS3D01G532200 chr5B 75.787 413 59 16 397 773 523409031 523409438 1.680000e-38 171.0
43 TraesCS3D01G532200 chr5B 84.932 73 11 0 7 79 55537749 55537677 1.350000e-09 75.0
44 TraesCS3D01G532200 chr5B 100.000 39 0 0 356 394 54320534 54320572 4.870000e-09 73.1
45 TraesCS3D01G532200 chr7D 81.181 271 38 10 510 770 571725284 571725017 4.600000e-49 206.0
46 TraesCS3D01G532200 chr4D 79.739 306 37 12 437 720 400888854 400889156 7.700000e-47 198.0
47 TraesCS3D01G532200 chr4D 89.691 97 10 0 3204 3300 156511528 156511624 1.320000e-24 124.0
48 TraesCS3D01G532200 chr5D 80.297 269 38 9 516 770 28026804 28027071 4.630000e-44 189.0
49 TraesCS3D01G532200 chr5D 87.500 64 8 0 7 70 45212314 45212251 1.350000e-09 75.0
50 TraesCS3D01G532200 chr5D 94.872 39 1 1 33 70 521497626 521497588 3.790000e-05 60.2
51 TraesCS3D01G532200 chr6B 83.254 209 10 7 3310 3515 350835211 350835025 6.030000e-38 169.0
52 TraesCS3D01G532200 chr6B 91.176 102 7 1 3215 3316 350886924 350886825 1.700000e-28 137.0
53 TraesCS3D01G532200 chr6D 89.916 119 9 2 3199 3317 255608648 255608763 2.190000e-32 150.0
54 TraesCS3D01G532200 chr6D 92.523 107 3 3 3309 3412 255610706 255610810 7.860000e-32 148.0
55 TraesCS3D01G532200 chr6D 82.581 155 21 4 407 556 97017573 97017726 7.920000e-27 132.0
56 TraesCS3D01G532200 chr6D 90.722 97 9 0 3204 3300 420624434 420624530 2.850000e-26 130.0
57 TraesCS3D01G532200 chr6D 87.273 110 12 1 3204 3313 281847305 281847412 1.320000e-24 124.0
58 TraesCS3D01G532200 chr6D 87.850 107 11 1 3210 3316 281851674 281851570 1.320000e-24 124.0
59 TraesCS3D01G532200 chr6D 90.217 92 9 0 3424 3515 281850978 281851069 1.710000e-23 121.0
60 TraesCS3D01G532200 chr6D 84.167 120 16 2 3198 3316 420627942 420627825 2.870000e-21 113.0
61 TraesCS3D01G532200 chr6D 95.122 41 1 1 2082 2122 463859146 463859185 2.930000e-06 63.9
62 TraesCS3D01G532200 chr4A 83.226 155 22 2 406 556 714908536 714908382 4.730000e-29 139.0
63 TraesCS3D01G532200 chr2B 88.496 113 9 2 398 506 675506072 675506184 2.200000e-27 134.0
64 TraesCS3D01G532200 chr2B 94.872 39 1 1 33 70 534537692 534537654 3.790000e-05 60.2
65 TraesCS3D01G532200 chr2D 90.625 64 6 0 7 70 574067069 574067006 6.250000e-13 86.1
66 TraesCS3D01G532200 chr2D 88.462 52 3 3 20 70 41824939 41824988 3.790000e-05 60.2
67 TraesCS3D01G532200 chr4B 88.462 52 3 3 20 70 440872393 440872442 3.790000e-05 60.2
68 TraesCS3D01G532200 chr4B 94.872 39 1 1 33 70 542972598 542972560 3.790000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G532200 chr3D 608331321 608334835 3514 True 6492.00 6492 100.0000 1 3515 1 chr3D.!!$R2 3514
1 TraesCS3D01G532200 chr3D 608420185 608424185 4000 False 464.50 689 85.6770 999 2315 4 chr3D.!!$F2 1316
2 TraesCS3D01G532200 chr3D 608348911 608351652 2741 True 464.48 1677 92.8688 1622 3515 5 chr3D.!!$R4 1893
3 TraesCS3D01G532200 chr3A 740927888 740930278 2390 False 3286.00 3286 91.6390 831 3203 1 chr3A.!!$F2 2372
4 TraesCS3D01G532200 chr3B 818319230 818321221 1991 False 2809.00 2809 92.4500 832 2788 1 chr3B.!!$F7 1956
5 TraesCS3D01G532200 chr3B 818156919 818158720 1801 True 1794.00 1794 84.8910 1003 2810 1 chr3B.!!$R3 1807
6 TraesCS3D01G532200 chr6A 12222574 12223222 648 False 948.00 948 93.1090 2499 3146 1 chr6A.!!$F3 647

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
721 722 0.039074 CTTCTGCGAGAGTCACGGTT 60.039 55.0 11.95 0.0 0.0 4.44 F
1726 4167 0.040058 TACAGGTTCCTAGGCCACGA 59.960 55.0 5.01 0.0 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2155 4627 0.391130 GCCACACGCACATCTCCTTA 60.391 55.0 0.0 0.0 37.47 2.69 R
3392 6190 0.170784 CACACACACACAAGCAAGCA 59.829 50.0 0.0 0.0 0.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.264719 GTAGAACTTTGTACTAAAGCCTTTACA 57.735 33.333 14.06 0.00 0.00 2.41
36 37 8.741603 AGAACTTTGTACTAAAGCCTTTACAA 57.258 30.769 14.06 0.92 33.62 2.41
37 38 9.181061 AGAACTTTGTACTAAAGCCTTTACAAA 57.819 29.630 13.33 13.33 40.43 2.83
44 45 9.835389 TGTACTAAAGCCTTTACAAAGTTAAGA 57.165 29.630 0.00 0.00 34.20 2.10
46 47 8.741603 ACTAAAGCCTTTACAAAGTTAAGACA 57.258 30.769 0.00 0.00 34.20 3.41
47 48 8.837389 ACTAAAGCCTTTACAAAGTTAAGACAG 58.163 33.333 0.00 0.00 34.20 3.51
48 49 7.640597 AAAGCCTTTACAAAGTTAAGACAGT 57.359 32.000 0.00 0.00 34.20 3.55
49 50 7.640597 AAGCCTTTACAAAGTTAAGACAGTT 57.359 32.000 1.32 0.00 34.20 3.16
50 51 8.741603 AAGCCTTTACAAAGTTAAGACAGTTA 57.258 30.769 1.32 0.00 34.20 2.24
51 52 8.919777 AGCCTTTACAAAGTTAAGACAGTTAT 57.080 30.769 1.32 0.00 34.20 1.89
52 53 9.350951 AGCCTTTACAAAGTTAAGACAGTTATT 57.649 29.630 1.32 0.00 34.20 1.40
53 54 9.961265 GCCTTTACAAAGTTAAGACAGTTATTT 57.039 29.630 1.32 0.00 34.20 1.40
58 59 8.528044 ACAAAGTTAAGACAGTTATTTTGGGA 57.472 30.769 0.00 0.00 0.00 4.37
60 61 8.410141 CAAAGTTAAGACAGTTATTTTGGGACA 58.590 33.333 0.00 0.00 0.00 4.02
61 62 7.745620 AGTTAAGACAGTTATTTTGGGACAG 57.254 36.000 0.00 0.00 42.39 3.51
62 63 7.514721 AGTTAAGACAGTTATTTTGGGACAGA 58.485 34.615 0.00 0.00 42.39 3.41
63 64 7.661847 AGTTAAGACAGTTATTTTGGGACAGAG 59.338 37.037 0.00 0.00 42.39 3.35
64 65 4.911390 AGACAGTTATTTTGGGACAGAGG 58.089 43.478 0.00 0.00 42.39 3.69
65 66 4.010349 GACAGTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
67 68 4.263506 ACAGTTATTTTGGGACAGAGGGAG 60.264 45.833 0.00 0.00 42.39 4.30
68 69 3.916989 AGTTATTTTGGGACAGAGGGAGT 59.083 43.478 0.00 0.00 42.39 3.85
69 70 5.045869 CAGTTATTTTGGGACAGAGGGAGTA 60.046 44.000 0.00 0.00 42.39 2.59
71 72 6.045106 AGTTATTTTGGGACAGAGGGAGTAAA 59.955 38.462 0.00 0.00 42.39 2.01
196 197 9.987272 TGTCTCACTCATATATAGGATTTGTTG 57.013 33.333 0.00 0.00 0.00 3.33
201 202 9.559732 CACTCATATATAGGATTTGTTGTTCCA 57.440 33.333 0.00 0.00 34.27 3.53
213 214 7.173047 GGATTTGTTGTTCCAACTAATTGCATT 59.827 33.333 14.67 0.00 34.17 3.56
214 215 7.856145 TTTGTTGTTCCAACTAATTGCATTT 57.144 28.000 8.41 0.00 34.17 2.32
215 216 7.856145 TTGTTGTTCCAACTAATTGCATTTT 57.144 28.000 8.41 0.00 34.17 1.82
216 217 7.244166 TGTTGTTCCAACTAATTGCATTTTG 57.756 32.000 8.41 0.34 34.17 2.44
217 218 7.044181 TGTTGTTCCAACTAATTGCATTTTGA 58.956 30.769 9.27 0.00 34.17 2.69
218 219 7.550551 TGTTGTTCCAACTAATTGCATTTTGAA 59.449 29.630 9.27 0.06 34.17 2.69
219 220 7.712264 TGTTCCAACTAATTGCATTTTGAAG 57.288 32.000 9.27 0.09 34.17 3.02
222 223 6.523840 TCCAACTAATTGCATTTTGAAGCTT 58.476 32.000 0.00 0.00 34.17 3.74
225 226 7.118680 CCAACTAATTGCATTTTGAAGCTTCAT 59.881 33.333 28.89 12.55 34.14 2.57
227 228 8.611654 ACTAATTGCATTTTGAAGCTTCATTT 57.388 26.923 28.89 14.18 37.00 2.32
228 229 8.500773 ACTAATTGCATTTTGAAGCTTCATTTG 58.499 29.630 28.89 24.03 37.00 2.32
229 230 6.870971 ATTGCATTTTGAAGCTTCATTTGT 57.129 29.167 28.89 13.12 37.00 2.83
231 232 7.783090 TTGCATTTTGAAGCTTCATTTGTAA 57.217 28.000 28.89 24.51 37.00 2.41
232 233 7.966246 TGCATTTTGAAGCTTCATTTGTAAT 57.034 28.000 28.89 18.52 37.00 1.89
233 234 9.486497 TTGCATTTTGAAGCTTCATTTGTAATA 57.514 25.926 28.89 9.49 37.00 0.98
267 268 8.763601 AGGGTATTGATCCTATGTAAGATAAGC 58.236 37.037 0.00 0.00 0.00 3.09
268 269 8.540388 GGGTATTGATCCTATGTAAGATAAGCA 58.460 37.037 0.00 0.00 0.00 3.91
269 270 9.372369 GGTATTGATCCTATGTAAGATAAGCAC 57.628 37.037 0.00 0.00 0.00 4.40
270 271 9.929180 GTATTGATCCTATGTAAGATAAGCACA 57.071 33.333 0.00 0.00 0.00 4.57
272 273 8.893219 TTGATCCTATGTAAGATAAGCACAAG 57.107 34.615 0.00 0.00 0.00 3.16
273 274 7.445121 TGATCCTATGTAAGATAAGCACAAGG 58.555 38.462 0.00 0.00 0.00 3.61
274 275 6.174720 TCCTATGTAAGATAAGCACAAGGG 57.825 41.667 0.00 0.00 0.00 3.95
275 276 5.903010 TCCTATGTAAGATAAGCACAAGGGA 59.097 40.000 0.00 0.00 0.00 4.20
276 277 6.385759 TCCTATGTAAGATAAGCACAAGGGAA 59.614 38.462 0.00 0.00 29.86 3.97
277 278 7.072454 TCCTATGTAAGATAAGCACAAGGGAAT 59.928 37.037 0.00 0.00 29.86 3.01
278 279 7.721399 CCTATGTAAGATAAGCACAAGGGAATT 59.279 37.037 0.00 0.00 0.00 2.17
281 282 6.719370 TGTAAGATAAGCACAAGGGAATTTGT 59.281 34.615 0.00 0.00 41.77 2.83
296 297 5.803118 GGAATTTGTCCGGACTAATTAACG 58.197 41.667 38.94 0.00 43.23 3.18
297 298 5.220719 GGAATTTGTCCGGACTAATTAACGG 60.221 44.000 38.94 13.73 43.23 4.44
299 300 1.575244 GTCCGGACTAATTAACGGGC 58.425 55.000 27.64 14.26 45.97 6.13
300 301 0.465287 TCCGGACTAATTAACGGGCC 59.535 55.000 17.62 0.00 45.97 5.80
301 302 0.877213 CCGGACTAATTAACGGGCCG 60.877 60.000 27.06 27.06 42.48 6.13
302 303 0.102844 CGGACTAATTAACGGGCCGA 59.897 55.000 35.78 11.41 39.62 5.54
303 304 1.575244 GGACTAATTAACGGGCCGAC 58.425 55.000 35.78 10.95 0.00 4.79
304 305 1.203065 GACTAATTAACGGGCCGACG 58.797 55.000 35.78 13.78 40.31 5.12
305 306 0.179103 ACTAATTAACGGGCCGACGG 60.179 55.000 35.78 10.29 38.39 4.79
306 307 0.179103 CTAATTAACGGGCCGACGGT 60.179 55.000 35.78 16.65 38.39 4.83
307 308 1.066908 CTAATTAACGGGCCGACGGTA 59.933 52.381 35.78 15.57 38.39 4.02
308 309 0.460109 AATTAACGGGCCGACGGTAC 60.460 55.000 35.78 8.96 35.50 3.34
310 311 2.211619 TTAACGGGCCGACGGTACAG 62.212 60.000 35.78 12.01 35.50 2.74
313 314 3.142838 GGGCCGACGGTACAGCTA 61.143 66.667 16.73 0.00 0.00 3.32
314 315 2.496291 GGGCCGACGGTACAGCTAT 61.496 63.158 16.73 0.00 0.00 2.97
316 317 1.453762 GGCCGACGGTACAGCTATCT 61.454 60.000 16.73 0.00 0.00 1.98
317 318 1.233019 GCCGACGGTACAGCTATCTA 58.767 55.000 16.73 0.00 0.00 1.98
318 319 1.605710 GCCGACGGTACAGCTATCTAA 59.394 52.381 16.73 0.00 0.00 2.10
320 321 3.670091 GCCGACGGTACAGCTATCTAATC 60.670 52.174 16.73 0.00 0.00 1.75
321 322 3.424565 CCGACGGTACAGCTATCTAATCG 60.425 52.174 5.48 0.00 0.00 3.34
322 323 3.186001 CGACGGTACAGCTATCTAATCGT 59.814 47.826 0.00 0.00 30.04 3.73
323 324 4.666149 CGACGGTACAGCTATCTAATCGTC 60.666 50.000 0.00 0.00 37.51 4.20
324 325 4.387598 ACGGTACAGCTATCTAATCGTCT 58.612 43.478 0.00 0.00 0.00 4.18
325 326 5.545588 ACGGTACAGCTATCTAATCGTCTA 58.454 41.667 0.00 0.00 0.00 2.59
326 327 5.994054 ACGGTACAGCTATCTAATCGTCTAA 59.006 40.000 0.00 0.00 0.00 2.10
328 329 6.073385 CGGTACAGCTATCTAATCGTCTAACA 60.073 42.308 0.00 0.00 0.00 2.41
329 330 7.299586 GGTACAGCTATCTAATCGTCTAACAG 58.700 42.308 0.00 0.00 0.00 3.16
330 331 5.764131 ACAGCTATCTAATCGTCTAACAGC 58.236 41.667 0.00 0.00 0.00 4.40
331 332 5.157781 CAGCTATCTAATCGTCTAACAGCC 58.842 45.833 0.00 0.00 0.00 4.85
332 333 5.048364 CAGCTATCTAATCGTCTAACAGCCT 60.048 44.000 0.00 0.00 0.00 4.58
333 334 6.149640 CAGCTATCTAATCGTCTAACAGCCTA 59.850 42.308 0.00 0.00 0.00 3.93
334 335 6.715718 AGCTATCTAATCGTCTAACAGCCTAA 59.284 38.462 0.00 0.00 0.00 2.69
335 336 7.394923 AGCTATCTAATCGTCTAACAGCCTAAT 59.605 37.037 0.00 0.00 0.00 1.73
336 337 8.675504 GCTATCTAATCGTCTAACAGCCTAATA 58.324 37.037 0.00 0.00 0.00 0.98
338 339 8.865420 ATCTAATCGTCTAACAGCCTAATAGA 57.135 34.615 0.00 0.00 0.00 1.98
340 341 8.731605 TCTAATCGTCTAACAGCCTAATAGATG 58.268 37.037 0.00 0.00 35.13 2.90
341 342 7.526142 AATCGTCTAACAGCCTAATAGATGA 57.474 36.000 9.18 9.18 42.65 2.92
343 344 7.526142 TCGTCTAACAGCCTAATAGATGATT 57.474 36.000 4.55 0.00 36.99 2.57
344 345 7.952671 TCGTCTAACAGCCTAATAGATGATTT 58.047 34.615 4.55 0.00 36.99 2.17
345 346 8.082852 TCGTCTAACAGCCTAATAGATGATTTC 58.917 37.037 4.55 0.00 36.99 2.17
347 348 8.082852 GTCTAACAGCCTAATAGATGATTTCGA 58.917 37.037 0.00 0.00 0.00 3.71
348 349 8.300286 TCTAACAGCCTAATAGATGATTTCGAG 58.700 37.037 0.00 0.00 0.00 4.04
349 350 6.656632 ACAGCCTAATAGATGATTTCGAGA 57.343 37.500 0.00 0.00 0.00 4.04
350 351 7.238486 ACAGCCTAATAGATGATTTCGAGAT 57.762 36.000 0.00 0.00 0.00 2.75
352 353 6.471841 CAGCCTAATAGATGATTTCGAGATCG 59.528 42.308 10.98 0.00 41.45 3.69
353 354 5.746245 GCCTAATAGATGATTTCGAGATCGG 59.254 44.000 10.98 5.00 40.29 4.18
354 355 6.404844 GCCTAATAGATGATTTCGAGATCGGA 60.405 42.308 10.98 0.00 40.29 4.55
355 356 7.539436 CCTAATAGATGATTTCGAGATCGGAA 58.461 38.462 10.98 0.00 41.59 4.30
360 361 3.577501 GATTTCGAGATCGGAAGCAAC 57.422 47.619 6.64 0.00 42.33 4.17
361 362 2.743636 TTTCGAGATCGGAAGCAACT 57.256 45.000 1.91 0.00 40.29 3.16
362 363 3.861276 TTTCGAGATCGGAAGCAACTA 57.139 42.857 1.91 0.00 40.29 2.24
364 365 2.366533 TCGAGATCGGAAGCAACTAGT 58.633 47.619 1.91 0.00 40.29 2.57
365 366 2.753452 TCGAGATCGGAAGCAACTAGTT 59.247 45.455 1.12 1.12 40.29 2.24
366 367 2.854777 CGAGATCGGAAGCAACTAGTTG 59.145 50.000 27.85 27.85 38.42 3.16
367 368 3.190874 GAGATCGGAAGCAACTAGTTGG 58.809 50.000 31.42 17.48 40.74 3.77
369 370 0.669318 TCGGAAGCAACTAGTTGGCG 60.669 55.000 31.42 11.76 40.74 5.69
370 371 0.669318 CGGAAGCAACTAGTTGGCGA 60.669 55.000 31.42 0.00 40.74 5.54
371 372 1.079503 GGAAGCAACTAGTTGGCGAG 58.920 55.000 31.42 11.07 40.74 5.03
373 374 1.291877 AAGCAACTAGTTGGCGAGCG 61.292 55.000 31.42 9.71 40.74 5.03
375 376 1.738099 CAACTAGTTGGCGAGCGCT 60.738 57.895 25.19 11.27 41.60 5.92
376 377 1.004918 AACTAGTTGGCGAGCGCTT 60.005 52.632 13.26 0.00 41.60 4.68
379 380 0.737715 CTAGTTGGCGAGCGCTTCTT 60.738 55.000 13.26 0.00 41.60 2.52
381 382 2.030412 TTGGCGAGCGCTTCTTCA 59.970 55.556 13.26 5.42 41.60 3.02
382 383 2.029288 TTGGCGAGCGCTTCTTCAG 61.029 57.895 13.26 0.19 41.60 3.02
385 386 2.164026 GCGAGCGCTTCTTCAGGAG 61.164 63.158 13.26 0.00 38.26 3.69
386 387 2.164026 CGAGCGCTTCTTCAGGAGC 61.164 63.158 13.26 0.00 0.00 4.70
387 388 1.813337 GAGCGCTTCTTCAGGAGCC 60.813 63.158 13.26 0.00 0.00 4.70
389 390 1.813337 GCGCTTCTTCAGGAGCCTC 60.813 63.158 0.00 0.00 0.00 4.70
390 391 1.153469 CGCTTCTTCAGGAGCCTCC 60.153 63.158 1.26 1.26 36.58 4.30
393 394 0.987294 CTTCTTCAGGAGCCTCCCAA 59.013 55.000 7.26 0.00 37.19 4.12
394 395 1.352352 CTTCTTCAGGAGCCTCCCAAA 59.648 52.381 7.26 0.96 37.19 3.28
405 406 3.865700 CTCCCAAAGGAAACAACGC 57.134 52.632 0.00 0.00 43.40 4.84
407 408 0.748729 TCCCAAAGGAAACAACGCGT 60.749 50.000 5.58 5.58 40.08 6.01
408 409 0.101579 CCCAAAGGAAACAACGCGTT 59.898 50.000 20.79 20.79 40.50 4.84
443 444 2.719354 GGACGCACGGTTTTGCTT 59.281 55.556 0.00 0.00 40.62 3.91
444 445 1.065109 GGACGCACGGTTTTGCTTT 59.935 52.632 0.00 0.00 40.62 3.51
448 449 2.635305 GCACGGTTTTGCTTTCGCG 61.635 57.895 0.00 0.00 39.59 5.87
449 450 1.010574 CACGGTTTTGCTTTCGCGA 60.011 52.632 3.71 3.71 39.65 5.87
450 451 0.991770 CACGGTTTTGCTTTCGCGAG 60.992 55.000 9.59 0.00 39.65 5.03
451 452 1.155424 ACGGTTTTGCTTTCGCGAGA 61.155 50.000 9.59 3.35 39.65 4.04
452 453 0.451135 CGGTTTTGCTTTCGCGAGAG 60.451 55.000 21.42 21.42 43.69 3.20
453 454 0.110192 GGTTTTGCTTTCGCGAGAGG 60.110 55.000 25.84 13.55 43.69 3.69
454 455 0.726118 GTTTTGCTTTCGCGAGAGGC 60.726 55.000 25.84 21.76 43.69 4.70
458 459 2.817423 GCTTTCGCGAGAGGCATGG 61.817 63.158 25.84 3.00 43.84 3.66
459 460 1.448540 CTTTCGCGAGAGGCATGGT 60.449 57.895 18.35 0.00 43.84 3.55
460 461 1.003839 TTTCGCGAGAGGCATGGTT 60.004 52.632 9.59 0.00 43.84 3.67
461 462 1.298157 TTTCGCGAGAGGCATGGTTG 61.298 55.000 9.59 0.00 43.84 3.77
462 463 2.434884 CGCGAGAGGCATGGTTGT 60.435 61.111 0.00 0.00 43.84 3.32
463 464 2.743752 CGCGAGAGGCATGGTTGTG 61.744 63.158 0.00 0.00 43.84 3.33
464 465 3.044059 GCGAGAGGCATGGTTGTGC 62.044 63.158 0.00 0.00 44.31 4.57
465 466 1.376424 CGAGAGGCATGGTTGTGCT 60.376 57.895 0.00 0.00 44.45 4.40
466 467 0.957395 CGAGAGGCATGGTTGTGCTT 60.957 55.000 0.00 0.00 44.45 3.91
467 468 1.251251 GAGAGGCATGGTTGTGCTTT 58.749 50.000 0.00 0.00 44.45 3.51
468 469 1.200948 GAGAGGCATGGTTGTGCTTTC 59.799 52.381 0.00 0.00 44.45 2.62
469 470 0.109597 GAGGCATGGTTGTGCTTTCG 60.110 55.000 0.00 0.00 44.45 3.46
471 472 1.080569 GCATGGTTGTGCTTTCGGG 60.081 57.895 0.00 0.00 41.82 5.14
472 473 1.523154 GCATGGTTGTGCTTTCGGGA 61.523 55.000 0.00 0.00 41.82 5.14
473 474 0.523072 CATGGTTGTGCTTTCGGGAG 59.477 55.000 0.00 0.00 0.00 4.30
474 475 0.400213 ATGGTTGTGCTTTCGGGAGA 59.600 50.000 0.00 0.00 0.00 3.71
475 476 0.250295 TGGTTGTGCTTTCGGGAGAG 60.250 55.000 0.00 0.00 41.75 3.20
476 477 0.955919 GGTTGTGCTTTCGGGAGAGG 60.956 60.000 0.00 0.00 41.75 3.69
477 478 1.302511 TTGTGCTTTCGGGAGAGGC 60.303 57.895 0.00 0.00 41.75 4.70
478 479 2.050836 TTGTGCTTTCGGGAGAGGCA 62.051 55.000 0.00 0.00 43.36 4.75
481 482 2.125512 CTTTCGGGAGAGGCACGG 60.126 66.667 0.00 0.00 45.52 4.94
482 483 4.388499 TTTCGGGAGAGGCACGGC 62.388 66.667 0.00 0.00 45.52 5.68
526 527 4.766404 ACAATTTTACCTTCCGCAAGAG 57.234 40.909 0.00 0.00 43.02 2.85
527 528 3.506067 ACAATTTTACCTTCCGCAAGAGG 59.494 43.478 0.00 0.00 43.02 3.69
528 529 1.530323 TTTTACCTTCCGCAAGAGGC 58.470 50.000 0.00 0.00 43.02 4.70
529 530 0.398696 TTTACCTTCCGCAAGAGGCA 59.601 50.000 0.00 0.00 45.17 4.75
530 531 0.321298 TTACCTTCCGCAAGAGGCAC 60.321 55.000 0.00 0.00 45.17 5.01
533 534 3.883744 CTTCCGCAAGAGGCACGGT 62.884 63.158 0.00 0.00 46.92 4.83
534 535 3.469863 TTCCGCAAGAGGCACGGTT 62.470 57.895 0.00 0.00 46.92 4.44
535 536 2.951475 TTCCGCAAGAGGCACGGTTT 62.951 55.000 0.00 0.00 46.92 3.27
536 537 2.551912 CCGCAAGAGGCACGGTTTT 61.552 57.895 0.00 0.00 45.17 2.43
538 539 1.661509 GCAAGAGGCACGGTTTTGC 60.662 57.895 0.00 0.00 43.97 3.68
539 540 2.032981 CAAGAGGCACGGTTTTGCT 58.967 52.632 0.00 0.00 42.56 3.91
541 542 0.668535 AAGAGGCACGGTTTTGCTTC 59.331 50.000 0.28 0.28 46.31 3.86
542 543 2.029743 GAGGCACGGTTTTGCTTCA 58.970 52.632 3.43 0.00 45.50 3.02
543 544 0.040067 GAGGCACGGTTTTGCTTCAG 60.040 55.000 3.43 0.00 45.50 3.02
544 545 1.661509 GGCACGGTTTTGCTTCAGC 60.662 57.895 0.00 0.00 42.56 4.26
571 572 4.319133 GGCCATGCCTCTCGAAAA 57.681 55.556 0.00 0.00 46.69 2.29
572 573 1.803289 GGCCATGCCTCTCGAAAAC 59.197 57.895 0.00 0.00 46.69 2.43
574 575 1.019278 GCCATGCCTCTCGAAAACGA 61.019 55.000 0.00 0.00 0.00 3.85
575 576 1.438651 CCATGCCTCTCGAAAACGAA 58.561 50.000 0.00 0.00 0.00 3.85
576 577 1.804151 CCATGCCTCTCGAAAACGAAA 59.196 47.619 0.00 0.00 0.00 3.46
577 578 2.225491 CCATGCCTCTCGAAAACGAAAA 59.775 45.455 0.00 0.00 0.00 2.29
578 579 3.304391 CCATGCCTCTCGAAAACGAAAAA 60.304 43.478 0.00 0.00 0.00 1.94
610 611 5.728351 TTATGTATTTTCCCTTTCGCGAG 57.272 39.130 9.59 0.00 0.00 5.03
611 612 3.322211 TGTATTTTCCCTTTCGCGAGA 57.678 42.857 9.59 3.35 39.20 4.04
614 615 0.953960 TTTTCCCTTTCGCGAGAGGC 60.954 55.000 34.08 0.00 43.69 4.70
615 616 2.107041 TTTCCCTTTCGCGAGAGGCA 62.107 55.000 34.08 22.16 43.84 4.75
616 617 2.781595 TTCCCTTTCGCGAGAGGCAC 62.782 60.000 34.08 0.00 43.84 5.01
617 618 3.181967 CCTTTCGCGAGAGGCACG 61.182 66.667 30.06 9.30 43.84 5.34
619 620 3.916392 CTTTCGCGAGAGGCACGGT 62.916 63.158 18.35 0.00 43.84 4.83
620 621 3.509137 TTTCGCGAGAGGCACGGTT 62.509 57.895 9.59 0.00 43.84 4.44
621 622 4.717629 TCGCGAGAGGCACGGTTG 62.718 66.667 3.71 0.00 43.84 3.77
657 658 2.358247 GGCCGTGCCTCTCGAAAA 60.358 61.111 7.58 0.00 46.69 2.29
658 659 2.677979 GGCCGTGCCTCTCGAAAAC 61.678 63.158 7.58 0.00 46.69 2.43
660 661 1.372499 CCGTGCCTCTCGAAAACGA 60.372 57.895 0.00 0.00 36.38 3.85
663 664 1.259507 CGTGCCTCTCGAAAACGAAAA 59.740 47.619 0.00 0.00 36.38 2.29
664 665 2.285950 CGTGCCTCTCGAAAACGAAAAA 60.286 45.455 0.00 0.00 36.38 1.94
693 694 2.519377 TTTTCCTTTCGCGAGAGACA 57.481 45.000 26.63 10.80 43.69 3.41
695 696 3.861276 TTTCCTTTCGCGAGAGACATA 57.139 42.857 26.63 7.44 43.69 2.29
696 697 3.422417 TTCCTTTCGCGAGAGACATAG 57.578 47.619 26.63 10.47 43.69 2.23
697 698 2.366533 TCCTTTCGCGAGAGACATAGT 58.633 47.619 26.63 0.00 43.69 2.12
698 699 2.753452 TCCTTTCGCGAGAGACATAGTT 59.247 45.455 26.63 0.00 43.69 2.24
699 700 3.192844 TCCTTTCGCGAGAGACATAGTTT 59.807 43.478 26.63 0.00 43.69 2.66
701 702 4.201628 CCTTTCGCGAGAGACATAGTTTTG 60.202 45.833 26.63 3.27 43.69 2.44
703 704 2.094700 TCGCGAGAGACATAGTTTTGCT 60.095 45.455 3.71 0.00 34.84 3.91
704 705 2.668457 CGCGAGAGACATAGTTTTGCTT 59.332 45.455 0.00 0.00 0.00 3.91
706 707 3.929610 GCGAGAGACATAGTTTTGCTTCT 59.070 43.478 0.00 0.00 0.00 2.85
707 708 4.201666 GCGAGAGACATAGTTTTGCTTCTG 60.202 45.833 0.00 0.00 0.00 3.02
709 710 3.681897 AGAGACATAGTTTTGCTTCTGCG 59.318 43.478 0.00 0.00 43.34 5.18
710 711 3.664107 AGACATAGTTTTGCTTCTGCGA 58.336 40.909 0.00 0.00 43.34 5.10
712 713 3.664107 ACATAGTTTTGCTTCTGCGAGA 58.336 40.909 0.00 0.00 43.34 4.04
713 714 3.681897 ACATAGTTTTGCTTCTGCGAGAG 59.318 43.478 0.00 0.00 43.34 3.20
715 716 2.139118 AGTTTTGCTTCTGCGAGAGTC 58.861 47.619 0.00 0.00 43.34 3.36
718 719 0.664466 TTGCTTCTGCGAGAGTCACG 60.664 55.000 5.53 5.53 43.34 4.35
719 720 1.803519 GCTTCTGCGAGAGTCACGG 60.804 63.158 11.95 0.00 0.00 4.94
720 721 1.581954 CTTCTGCGAGAGTCACGGT 59.418 57.895 11.95 0.00 0.00 4.83
721 722 0.039074 CTTCTGCGAGAGTCACGGTT 60.039 55.000 11.95 0.00 0.00 4.44
722 723 0.318699 TTCTGCGAGAGTCACGGTTG 60.319 55.000 11.95 0.00 0.00 3.77
723 724 1.007271 CTGCGAGAGTCACGGTTGT 60.007 57.895 11.95 0.00 0.00 3.32
725 726 2.658707 GCGAGAGTCACGGTTGTGC 61.659 63.158 11.95 0.00 46.01 4.57
726 727 1.007271 CGAGAGTCACGGTTGTGCT 60.007 57.895 1.62 0.00 46.01 4.40
729 730 1.527311 GAGAGTCACGGTTGTGCTTTC 59.473 52.381 0.00 0.00 46.01 2.62
733 734 4.524869 ACGGTTGTGCTTTCGTGA 57.475 50.000 0.00 0.00 34.40 4.35
734 735 2.307363 ACGGTTGTGCTTTCGTGAG 58.693 52.632 0.00 0.00 34.40 3.51
735 736 0.179094 ACGGTTGTGCTTTCGTGAGA 60.179 50.000 0.00 0.00 34.40 3.27
736 737 0.508641 CGGTTGTGCTTTCGTGAGAG 59.491 55.000 0.00 0.00 43.69 3.20
737 738 0.868406 GGTTGTGCTTTCGTGAGAGG 59.132 55.000 0.00 0.00 43.69 3.69
738 739 0.235926 GTTGTGCTTTCGTGAGAGGC 59.764 55.000 0.00 0.00 43.69 4.70
739 740 0.179059 TTGTGCTTTCGTGAGAGGCA 60.179 50.000 0.00 0.00 44.13 4.75
740 741 4.361253 TGCTTTCGTGAGAGGCAC 57.639 55.556 0.00 0.00 42.51 5.01
784 785 1.247567 AAAACATGCTCCTGGTTCGG 58.752 50.000 0.00 0.00 0.00 4.30
785 786 0.110486 AAACATGCTCCTGGTTCGGT 59.890 50.000 0.00 0.00 0.00 4.69
786 787 0.110486 AACATGCTCCTGGTTCGGTT 59.890 50.000 0.00 0.00 0.00 4.44
787 788 0.110486 ACATGCTCCTGGTTCGGTTT 59.890 50.000 0.00 0.00 0.00 3.27
788 789 1.247567 CATGCTCCTGGTTCGGTTTT 58.752 50.000 0.00 0.00 0.00 2.43
789 790 1.613437 CATGCTCCTGGTTCGGTTTTT 59.387 47.619 0.00 0.00 0.00 1.94
790 791 1.314730 TGCTCCTGGTTCGGTTTTTC 58.685 50.000 0.00 0.00 0.00 2.29
791 792 1.314730 GCTCCTGGTTCGGTTTTTCA 58.685 50.000 0.00 0.00 0.00 2.69
792 793 1.266989 GCTCCTGGTTCGGTTTTTCAG 59.733 52.381 0.00 0.00 0.00 3.02
793 794 2.572290 CTCCTGGTTCGGTTTTTCAGT 58.428 47.619 0.00 0.00 0.00 3.41
794 795 2.548480 CTCCTGGTTCGGTTTTTCAGTC 59.452 50.000 0.00 0.00 0.00 3.51
797 798 2.943033 CTGGTTCGGTTTTTCAGTCTGT 59.057 45.455 0.00 0.00 0.00 3.41
799 800 3.759618 TGGTTCGGTTTTTCAGTCTGTTT 59.240 39.130 0.00 0.00 0.00 2.83
800 801 4.218852 TGGTTCGGTTTTTCAGTCTGTTTT 59.781 37.500 0.00 0.00 0.00 2.43
801 802 5.165676 GGTTCGGTTTTTCAGTCTGTTTTT 58.834 37.500 0.00 0.00 0.00 1.94
886 888 6.691388 CCGAAAACACTTTTTCTCTACTTTGG 59.309 38.462 7.94 0.00 45.86 3.28
887 889 7.248437 CGAAAACACTTTTTCTCTACTTTGGT 58.752 34.615 7.94 0.00 45.86 3.67
916 918 5.023920 CAGCTGCAAAATATAGACGTGTTG 58.976 41.667 0.00 0.00 0.00 3.33
923 925 7.818446 TGCAAAATATAGACGTGTTGGTACTTA 59.182 33.333 0.00 0.00 0.00 2.24
976 978 4.087182 ACGTACAGGTGCCAGCTATATAT 58.913 43.478 0.00 0.00 0.00 0.86
978 980 4.399618 CGTACAGGTGCCAGCTATATATCT 59.600 45.833 0.00 0.00 0.00 1.98
979 981 4.815533 ACAGGTGCCAGCTATATATCTG 57.184 45.455 6.61 6.61 0.00 2.90
980 982 3.055530 ACAGGTGCCAGCTATATATCTGC 60.056 47.826 7.90 5.04 0.00 4.26
983 985 3.937706 GGTGCCAGCTATATATCTGCTTG 59.062 47.826 7.90 8.26 34.51 4.01
984 986 4.323028 GGTGCCAGCTATATATCTGCTTGA 60.323 45.833 7.90 0.00 34.51 3.02
986 988 5.523188 GTGCCAGCTATATATCTGCTTGATC 59.477 44.000 7.90 0.00 36.65 2.92
994 996 4.842292 CTGCTTGATCCGCAGCTA 57.158 55.556 17.69 2.41 46.98 3.32
995 997 3.302375 CTGCTTGATCCGCAGCTAT 57.698 52.632 17.69 0.00 46.98 2.97
996 998 2.445565 CTGCTTGATCCGCAGCTATA 57.554 50.000 17.69 0.00 46.98 1.31
997 999 2.759191 CTGCTTGATCCGCAGCTATAA 58.241 47.619 17.69 0.00 46.98 0.98
1256 3024 1.684450 TCTCCAACACAAGCTACGTCA 59.316 47.619 0.00 0.00 0.00 4.35
1338 3109 2.104331 CGCCGTCCGCTACTTCAT 59.896 61.111 0.00 0.00 34.21 2.57
1339 3110 1.357690 CGCCGTCCGCTACTTCATA 59.642 57.895 0.00 0.00 34.21 2.15
1706 4147 1.010462 GCAACCAACAACGACGACC 60.010 57.895 0.00 0.00 0.00 4.79
1726 4167 0.040058 TACAGGTTCCTAGGCCACGA 59.960 55.000 5.01 0.00 0.00 4.35
1926 4398 1.266989 CAAGGAGCCGGAAAAGTTGTC 59.733 52.381 5.05 0.00 0.00 3.18
2119 4591 2.209273 CACAACCTCATCGACAACACA 58.791 47.619 0.00 0.00 0.00 3.72
2129 4601 4.270084 TCATCGACAACACAACAGAGTTTC 59.730 41.667 0.00 0.00 0.00 2.78
2132 4604 3.616821 CGACAACACAACAGAGTTTCTCA 59.383 43.478 0.00 0.00 32.06 3.27
2321 4839 3.065786 ACACTTGTTCAGCATGTTCAGTG 59.934 43.478 0.00 0.00 37.40 3.66
2417 4937 0.907486 CCCTGAAGAGGTGAGCATGA 59.093 55.000 0.00 0.00 37.73 3.07
2490 5013 0.317160 TGTGTAGTTGGAGTGCTCGG 59.683 55.000 0.00 0.00 0.00 4.63
2600 5125 7.220740 TGGTCCAATATGTAGCGAATTTATCA 58.779 34.615 0.00 0.00 0.00 2.15
2614 5139 4.672587 ATTTATCAGTTAGCTCGGCTCA 57.327 40.909 1.46 0.00 40.44 4.26
2673 5199 7.530010 ACAAGATGCATGTTATATTAATCGCC 58.470 34.615 9.00 0.00 0.00 5.54
2754 5292 0.170339 CACTGCACTGCATCATGTGG 59.830 55.000 3.64 0.00 38.13 4.17
2794 5332 1.120530 TGCCCCGTTTCTATCTCTCC 58.879 55.000 0.00 0.00 0.00 3.71
2942 5480 4.392940 AGCTCACAAATCTATACCCATGC 58.607 43.478 0.00 0.00 0.00 4.06
3014 5553 6.618287 TGGAACAATGCCTTTCTATAATCG 57.382 37.500 0.00 0.00 31.92 3.34
3129 5924 7.220741 TGTATTGCTTTGTATTTTACAGCCA 57.779 32.000 0.00 0.00 40.24 4.75
3135 5930 6.699642 TGCTTTGTATTTTACAGCCAACTTTC 59.300 34.615 0.00 0.00 40.24 2.62
3146 5941 5.365619 ACAGCCAACTTTCCGTATATAAGG 58.634 41.667 8.31 8.31 0.00 2.69
3208 6003 2.638480 ATCTCTCTCCTCCAGACTCG 57.362 55.000 0.00 0.00 0.00 4.18
3242 6037 1.082690 GTAGAGCAAAGGCACAGAGC 58.917 55.000 0.00 0.00 44.61 4.09
3263 6058 2.675317 CGCCTTAGCCTACCATATCTGC 60.675 54.545 0.00 0.00 34.57 4.26
3276 6071 3.744942 CCATATCTGCCACTCATTCTTCG 59.255 47.826 0.00 0.00 0.00 3.79
3283 6078 1.202582 CCACTCATTCTTCGTCCGACT 59.797 52.381 0.00 0.00 0.00 4.18
3285 6080 2.095212 CACTCATTCTTCGTCCGACTCA 60.095 50.000 0.00 0.00 0.00 3.41
3286 6081 2.755655 ACTCATTCTTCGTCCGACTCAT 59.244 45.455 0.00 0.00 0.00 2.90
3287 6082 3.945921 ACTCATTCTTCGTCCGACTCATA 59.054 43.478 0.00 0.00 0.00 2.15
3288 6083 4.035792 ACTCATTCTTCGTCCGACTCATAG 59.964 45.833 0.00 0.00 0.00 2.23
3289 6084 3.315470 TCATTCTTCGTCCGACTCATAGG 59.685 47.826 0.00 0.00 0.00 2.57
3290 6085 2.704464 TCTTCGTCCGACTCATAGGA 57.296 50.000 0.00 0.00 0.00 2.94
3291 6086 3.210232 TCTTCGTCCGACTCATAGGAT 57.790 47.619 0.00 0.00 38.97 3.24
3292 6087 3.552875 TCTTCGTCCGACTCATAGGATT 58.447 45.455 0.00 0.00 38.97 3.01
3293 6088 3.315470 TCTTCGTCCGACTCATAGGATTG 59.685 47.826 0.00 0.00 38.97 2.67
3294 6089 2.927028 TCGTCCGACTCATAGGATTGA 58.073 47.619 0.00 0.00 38.97 2.57
3295 6090 2.617308 TCGTCCGACTCATAGGATTGAC 59.383 50.000 0.00 0.00 38.97 3.18
3296 6091 2.619177 CGTCCGACTCATAGGATTGACT 59.381 50.000 0.00 0.00 38.97 3.41
3297 6092 3.549019 CGTCCGACTCATAGGATTGACTG 60.549 52.174 0.00 0.00 38.97 3.51
3298 6093 3.632604 GTCCGACTCATAGGATTGACTGA 59.367 47.826 0.00 0.00 38.97 3.41
3299 6094 4.098044 GTCCGACTCATAGGATTGACTGAA 59.902 45.833 0.00 0.00 38.97 3.02
3312 6107 6.154363 AGGATTGACTGAAAAAGGAAAACACA 59.846 34.615 0.00 0.00 0.00 3.72
3377 6175 9.880157 ACTACAAACTACTACAAGTTTTCTGAA 57.120 29.630 0.00 0.00 45.20 3.02
3390 6188 8.082242 ACAAGTTTTCTGAATTTATACCTGCAC 58.918 33.333 0.00 0.00 0.00 4.57
3391 6189 8.299570 CAAGTTTTCTGAATTTATACCTGCACT 58.700 33.333 0.00 0.00 0.00 4.40
3392 6190 8.409358 AGTTTTCTGAATTTATACCTGCACTT 57.591 30.769 0.00 0.00 0.00 3.16
3393 6191 8.299570 AGTTTTCTGAATTTATACCTGCACTTG 58.700 33.333 0.00 0.00 0.00 3.16
3414 6212 1.199789 CTTGCTTGTGTGTGTGTGTGT 59.800 47.619 0.00 0.00 0.00 3.72
3415 6213 0.520847 TGCTTGTGTGTGTGTGTGTG 59.479 50.000 0.00 0.00 0.00 3.82
3416 6214 0.798009 GCTTGTGTGTGTGTGTGTGC 60.798 55.000 0.00 0.00 0.00 4.57
3417 6215 0.521034 CTTGTGTGTGTGTGTGTGCG 60.521 55.000 0.00 0.00 0.00 5.34
3418 6216 2.277247 GTGTGTGTGTGTGTGCGC 60.277 61.111 0.00 0.00 0.00 6.09
3419 6217 3.858989 TGTGTGTGTGTGTGCGCG 61.859 61.111 0.00 0.00 0.00 6.86
3438 6236 3.773630 GCGCGTGCGTGTATGTGT 61.774 61.111 16.27 0.00 42.09 3.72
3439 6237 2.093799 CGCGTGCGTGTATGTGTG 59.906 61.111 6.00 0.00 34.35 3.82
3440 6238 2.653967 CGCGTGCGTGTATGTGTGT 61.654 57.895 6.00 0.00 34.35 3.72
3441 6239 1.338526 CGCGTGCGTGTATGTGTGTA 61.339 55.000 6.00 0.00 34.35 2.90
3456 6254 5.868043 TGTGTGTAATCAGAATGCTTGAG 57.132 39.130 0.00 0.00 34.76 3.02
3457 6255 4.696877 TGTGTGTAATCAGAATGCTTGAGG 59.303 41.667 0.00 0.00 34.76 3.86
3477 6275 3.266772 AGGTCTGTAGAAATCATGGGCAA 59.733 43.478 0.00 0.00 0.00 4.52
3481 6279 6.351286 GGTCTGTAGAAATCATGGGCAATTTT 60.351 38.462 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 9.486497 GTAAAGGCTTTAGTACAAAGTTCTACT 57.514 33.333 19.55 0.00 0.00 2.57
9 10 9.264719 TGTAAAGGCTTTAGTACAAAGTTCTAC 57.735 33.333 19.55 6.40 0.00 2.59
10 11 9.835389 TTGTAAAGGCTTTAGTACAAAGTTCTA 57.165 29.630 19.55 0.00 34.42 2.10
11 12 8.741603 TTGTAAAGGCTTTAGTACAAAGTTCT 57.258 30.769 19.55 11.41 34.42 3.01
18 19 9.835389 TCTTAACTTTGTAAAGGCTTTAGTACA 57.165 29.630 19.55 14.12 40.31 2.90
20 21 9.835389 TGTCTTAACTTTGTAAAGGCTTTAGTA 57.165 29.630 19.55 9.50 40.31 1.82
21 22 8.741603 TGTCTTAACTTTGTAAAGGCTTTAGT 57.258 30.769 19.55 12.95 40.31 2.24
22 23 8.837389 ACTGTCTTAACTTTGTAAAGGCTTTAG 58.163 33.333 19.55 12.31 40.31 1.85
23 24 8.741603 ACTGTCTTAACTTTGTAAAGGCTTTA 57.258 30.769 15.49 15.49 40.31 1.85
24 25 7.640597 ACTGTCTTAACTTTGTAAAGGCTTT 57.359 32.000 17.76 17.76 40.31 3.51
25 26 7.640597 AACTGTCTTAACTTTGTAAAGGCTT 57.359 32.000 9.00 0.00 40.31 4.35
26 27 8.919777 ATAACTGTCTTAACTTTGTAAAGGCT 57.080 30.769 9.00 0.00 40.31 4.58
32 33 9.629878 TCCCAAAATAACTGTCTTAACTTTGTA 57.370 29.630 0.00 0.00 0.00 2.41
33 34 8.410912 GTCCCAAAATAACTGTCTTAACTTTGT 58.589 33.333 0.00 0.00 0.00 2.83
35 36 8.528044 TGTCCCAAAATAACTGTCTTAACTTT 57.472 30.769 0.00 0.00 0.00 2.66
36 37 7.996644 TCTGTCCCAAAATAACTGTCTTAACTT 59.003 33.333 0.00 0.00 0.00 2.66
37 38 7.514721 TCTGTCCCAAAATAACTGTCTTAACT 58.485 34.615 0.00 0.00 0.00 2.24
39 40 6.940298 CCTCTGTCCCAAAATAACTGTCTTAA 59.060 38.462 0.00 0.00 0.00 1.85
40 41 6.472887 CCTCTGTCCCAAAATAACTGTCTTA 58.527 40.000 0.00 0.00 0.00 2.10
42 43 4.263506 CCCTCTGTCCCAAAATAACTGTCT 60.264 45.833 0.00 0.00 0.00 3.41
43 44 4.010349 CCCTCTGTCCCAAAATAACTGTC 58.990 47.826 0.00 0.00 0.00 3.51
44 45 3.655777 TCCCTCTGTCCCAAAATAACTGT 59.344 43.478 0.00 0.00 0.00 3.55
46 47 3.916989 ACTCCCTCTGTCCCAAAATAACT 59.083 43.478 0.00 0.00 0.00 2.24
47 48 4.302559 ACTCCCTCTGTCCCAAAATAAC 57.697 45.455 0.00 0.00 0.00 1.89
48 49 6.457159 TTTACTCCCTCTGTCCCAAAATAA 57.543 37.500 0.00 0.00 0.00 1.40
49 50 6.457159 TTTTACTCCCTCTGTCCCAAAATA 57.543 37.500 0.00 0.00 0.00 1.40
50 51 5.333566 TTTTACTCCCTCTGTCCCAAAAT 57.666 39.130 0.00 0.00 0.00 1.82
51 52 4.799715 TTTTACTCCCTCTGTCCCAAAA 57.200 40.909 0.00 0.00 0.00 2.44
52 53 4.799715 TTTTTACTCCCTCTGTCCCAAA 57.200 40.909 0.00 0.00 0.00 3.28
170 171 9.987272 CAACAAATCCTATATATGAGTGAGACA 57.013 33.333 0.00 0.00 0.00 3.41
171 172 9.988815 ACAACAAATCCTATATATGAGTGAGAC 57.011 33.333 0.00 0.00 0.00 3.36
174 175 9.778741 GGAACAACAAATCCTATATATGAGTGA 57.221 33.333 0.00 0.00 32.75 3.41
187 188 7.173047 AATGCAATTAGTTGGAACAACAAATCC 59.827 33.333 13.83 0.00 38.30 3.01
189 190 8.449251 AAATGCAATTAGTTGGAACAACAAAT 57.551 26.923 13.83 0.00 39.11 2.32
190 191 7.856145 AAATGCAATTAGTTGGAACAACAAA 57.144 28.000 13.83 0.00 39.11 2.83
192 193 7.044181 TCAAAATGCAATTAGTTGGAACAACA 58.956 30.769 13.83 0.00 39.11 3.33
193 194 7.475771 TCAAAATGCAATTAGTTGGAACAAC 57.524 32.000 4.04 4.04 39.11 3.32
194 195 7.254727 GCTTCAAAATGCAATTAGTTGGAACAA 60.255 33.333 0.00 0.00 39.11 2.83
196 197 6.424812 AGCTTCAAAATGCAATTAGTTGGAAC 59.575 34.615 0.00 0.00 39.21 3.62
198 199 6.100404 AGCTTCAAAATGCAATTAGTTGGA 57.900 33.333 0.00 0.00 40.09 3.53
199 200 6.424509 TGAAGCTTCAAAATGCAATTAGTTGG 59.575 34.615 26.61 0.00 31.23 3.77
201 202 8.611654 AATGAAGCTTCAAAATGCAATTAGTT 57.388 26.923 31.55 14.24 41.13 2.24
202 203 8.500773 CAAATGAAGCTTCAAAATGCAATTAGT 58.499 29.630 31.55 8.81 41.13 2.24
203 204 8.500773 ACAAATGAAGCTTCAAAATGCAATTAG 58.499 29.630 31.55 13.37 41.13 1.73
204 205 8.380743 ACAAATGAAGCTTCAAAATGCAATTA 57.619 26.923 31.55 5.20 41.13 1.40
205 206 7.266922 ACAAATGAAGCTTCAAAATGCAATT 57.733 28.000 31.55 16.32 41.13 2.32
206 207 6.870971 ACAAATGAAGCTTCAAAATGCAAT 57.129 29.167 31.55 11.05 41.13 3.56
208 209 7.966246 ATTACAAATGAAGCTTCAAAATGCA 57.034 28.000 31.55 18.01 41.13 3.96
241 242 8.763601 GCTTATCTTACATAGGATCAATACCCT 58.236 37.037 0.00 0.00 36.60 4.34
242 243 8.540388 TGCTTATCTTACATAGGATCAATACCC 58.460 37.037 0.00 0.00 0.00 3.69
243 244 9.372369 GTGCTTATCTTACATAGGATCAATACC 57.628 37.037 0.00 0.00 0.00 2.73
246 247 9.499479 CTTGTGCTTATCTTACATAGGATCAAT 57.501 33.333 0.00 0.00 0.00 2.57
247 248 7.933577 CCTTGTGCTTATCTTACATAGGATCAA 59.066 37.037 0.00 0.00 30.79 2.57
248 249 7.445121 CCTTGTGCTTATCTTACATAGGATCA 58.555 38.462 0.00 0.00 30.79 2.92
249 250 6.876257 CCCTTGTGCTTATCTTACATAGGATC 59.124 42.308 0.00 0.00 30.79 3.36
250 251 6.558775 TCCCTTGTGCTTATCTTACATAGGAT 59.441 38.462 0.00 0.00 30.79 3.24
251 252 5.903010 TCCCTTGTGCTTATCTTACATAGGA 59.097 40.000 0.00 0.00 30.79 2.94
252 253 6.174720 TCCCTTGTGCTTATCTTACATAGG 57.825 41.667 0.00 0.00 0.00 2.57
253 254 8.682936 AATTCCCTTGTGCTTATCTTACATAG 57.317 34.615 0.00 0.00 0.00 2.23
255 256 7.397192 ACAAATTCCCTTGTGCTTATCTTACAT 59.603 33.333 0.00 0.00 38.12 2.29
258 259 6.377146 GGACAAATTCCCTTGTGCTTATCTTA 59.623 38.462 1.30 0.00 42.49 2.10
259 260 5.185828 GGACAAATTCCCTTGTGCTTATCTT 59.814 40.000 1.30 0.00 42.49 2.40
260 261 4.706962 GGACAAATTCCCTTGTGCTTATCT 59.293 41.667 1.30 0.00 42.49 1.98
262 263 3.443681 CGGACAAATTCCCTTGTGCTTAT 59.556 43.478 6.44 0.00 43.30 1.73
263 264 2.817258 CGGACAAATTCCCTTGTGCTTA 59.183 45.455 6.44 0.00 43.30 3.09
264 265 1.613437 CGGACAAATTCCCTTGTGCTT 59.387 47.619 6.44 0.00 43.30 3.91
265 266 1.247567 CGGACAAATTCCCTTGTGCT 58.752 50.000 6.44 0.00 43.30 4.40
266 267 0.243636 CCGGACAAATTCCCTTGTGC 59.756 55.000 0.00 0.00 42.27 4.57
267 268 1.539827 GTCCGGACAAATTCCCTTGTG 59.460 52.381 29.75 0.00 42.27 3.33
268 269 1.423921 AGTCCGGACAAATTCCCTTGT 59.576 47.619 35.00 8.09 42.27 3.16
269 270 2.200373 AGTCCGGACAAATTCCCTTG 57.800 50.000 35.00 0.00 42.27 3.61
270 271 4.586306 ATTAGTCCGGACAAATTCCCTT 57.414 40.909 35.00 14.46 42.27 3.95
271 272 4.586306 AATTAGTCCGGACAAATTCCCT 57.414 40.909 35.00 15.20 42.27 4.20
272 273 5.220719 CGTTAATTAGTCCGGACAAATTCCC 60.221 44.000 35.00 16.73 42.27 3.97
273 274 5.220719 CCGTTAATTAGTCCGGACAAATTCC 60.221 44.000 35.00 16.00 43.01 3.01
274 275 5.220719 CCCGTTAATTAGTCCGGACAAATTC 60.221 44.000 35.00 17.22 43.01 2.17
275 276 4.637091 CCCGTTAATTAGTCCGGACAAATT 59.363 41.667 35.00 17.84 43.01 1.82
276 277 4.193865 CCCGTTAATTAGTCCGGACAAAT 58.806 43.478 35.00 21.12 43.01 2.32
277 278 3.598299 CCCGTTAATTAGTCCGGACAAA 58.402 45.455 35.00 20.56 43.01 2.83
278 279 2.677613 GCCCGTTAATTAGTCCGGACAA 60.678 50.000 35.00 25.42 43.01 3.18
281 282 0.465287 GGCCCGTTAATTAGTCCGGA 59.535 55.000 17.09 0.00 43.01 5.14
284 285 1.575244 GTCGGCCCGTTAATTAGTCC 58.425 55.000 1.63 0.00 0.00 3.85
286 287 0.179103 CCGTCGGCCCGTTAATTAGT 60.179 55.000 1.63 0.00 0.00 2.24
287 288 0.179103 ACCGTCGGCCCGTTAATTAG 60.179 55.000 12.28 0.00 0.00 1.73
288 289 1.107114 TACCGTCGGCCCGTTAATTA 58.893 50.000 12.28 0.00 0.00 1.40
289 290 0.460109 GTACCGTCGGCCCGTTAATT 60.460 55.000 12.28 0.00 0.00 1.40
290 291 1.141665 GTACCGTCGGCCCGTTAAT 59.858 57.895 12.28 0.00 0.00 1.40
291 292 2.211619 CTGTACCGTCGGCCCGTTAA 62.212 60.000 12.28 0.00 0.00 2.01
292 293 2.674727 TGTACCGTCGGCCCGTTA 60.675 61.111 12.28 0.00 0.00 3.18
293 294 4.060038 CTGTACCGTCGGCCCGTT 62.060 66.667 12.28 0.00 0.00 4.44
296 297 2.417649 GATAGCTGTACCGTCGGCCC 62.418 65.000 12.28 2.09 40.22 5.80
297 298 1.007618 GATAGCTGTACCGTCGGCC 60.008 63.158 12.28 2.51 40.22 6.13
299 300 3.424565 CGATTAGATAGCTGTACCGTCGG 60.425 52.174 10.48 10.48 0.00 4.79
300 301 3.186001 ACGATTAGATAGCTGTACCGTCG 59.814 47.826 0.00 2.57 0.00 5.12
301 302 4.451774 AGACGATTAGATAGCTGTACCGTC 59.548 45.833 14.60 14.60 42.59 4.79
302 303 4.387598 AGACGATTAGATAGCTGTACCGT 58.612 43.478 0.00 0.00 0.00 4.83
303 304 6.073385 TGTTAGACGATTAGATAGCTGTACCG 60.073 42.308 0.00 0.00 0.00 4.02
304 305 7.199541 TGTTAGACGATTAGATAGCTGTACC 57.800 40.000 0.00 0.00 0.00 3.34
305 306 6.797995 GCTGTTAGACGATTAGATAGCTGTAC 59.202 42.308 0.00 0.00 0.00 2.90
306 307 6.072618 GGCTGTTAGACGATTAGATAGCTGTA 60.073 42.308 0.00 0.00 0.00 2.74
307 308 5.278561 GGCTGTTAGACGATTAGATAGCTGT 60.279 44.000 0.00 0.00 0.00 4.40
308 309 5.048364 AGGCTGTTAGACGATTAGATAGCTG 60.048 44.000 0.00 0.00 0.00 4.24
310 311 5.379732 AGGCTGTTAGACGATTAGATAGC 57.620 43.478 0.00 0.00 0.00 2.97
313 314 8.865420 TCTATTAGGCTGTTAGACGATTAGAT 57.135 34.615 0.00 0.00 0.00 1.98
314 315 8.731605 CATCTATTAGGCTGTTAGACGATTAGA 58.268 37.037 9.56 0.00 29.68 2.10
316 317 8.631480 TCATCTATTAGGCTGTTAGACGATTA 57.369 34.615 9.56 0.00 0.00 1.75
317 318 7.526142 TCATCTATTAGGCTGTTAGACGATT 57.474 36.000 9.56 0.00 0.00 3.34
318 319 7.710676 ATCATCTATTAGGCTGTTAGACGAT 57.289 36.000 9.79 9.79 0.00 3.73
320 321 7.061210 CGAAATCATCTATTAGGCTGTTAGACG 59.939 40.741 9.56 3.63 0.00 4.18
321 322 8.082852 TCGAAATCATCTATTAGGCTGTTAGAC 58.917 37.037 9.56 0.00 0.00 2.59
322 323 8.178313 TCGAAATCATCTATTAGGCTGTTAGA 57.822 34.615 0.00 3.93 0.00 2.10
323 324 8.300286 TCTCGAAATCATCTATTAGGCTGTTAG 58.700 37.037 0.00 0.00 0.00 2.34
324 325 8.178313 TCTCGAAATCATCTATTAGGCTGTTA 57.822 34.615 0.00 0.00 0.00 2.41
325 326 7.055667 TCTCGAAATCATCTATTAGGCTGTT 57.944 36.000 0.00 0.00 0.00 3.16
326 327 6.656632 TCTCGAAATCATCTATTAGGCTGT 57.343 37.500 0.00 0.00 0.00 4.40
328 329 6.405286 CCGATCTCGAAATCATCTATTAGGCT 60.405 42.308 0.00 0.00 43.02 4.58
329 330 5.746245 CCGATCTCGAAATCATCTATTAGGC 59.254 44.000 0.00 0.00 43.02 3.93
330 331 7.089770 TCCGATCTCGAAATCATCTATTAGG 57.910 40.000 0.00 0.00 43.02 2.69
331 332 7.219917 GCTTCCGATCTCGAAATCATCTATTAG 59.780 40.741 0.00 0.00 43.02 1.73
332 333 7.030165 GCTTCCGATCTCGAAATCATCTATTA 58.970 38.462 0.00 0.00 43.02 0.98
333 334 5.866633 GCTTCCGATCTCGAAATCATCTATT 59.133 40.000 0.00 0.00 43.02 1.73
334 335 5.047731 TGCTTCCGATCTCGAAATCATCTAT 60.048 40.000 0.00 0.00 43.02 1.98
335 336 4.278419 TGCTTCCGATCTCGAAATCATCTA 59.722 41.667 0.00 0.00 43.02 1.98
336 337 3.068732 TGCTTCCGATCTCGAAATCATCT 59.931 43.478 0.00 0.00 43.02 2.90
337 338 3.384668 TGCTTCCGATCTCGAAATCATC 58.615 45.455 0.00 0.00 43.02 2.92
338 339 3.459232 TGCTTCCGATCTCGAAATCAT 57.541 42.857 0.00 0.00 43.02 2.45
340 341 3.190874 AGTTGCTTCCGATCTCGAAATC 58.809 45.455 0.22 0.00 43.02 2.17
341 342 3.252974 AGTTGCTTCCGATCTCGAAAT 57.747 42.857 0.22 0.00 43.02 2.17
343 344 2.753452 ACTAGTTGCTTCCGATCTCGAA 59.247 45.455 0.22 0.00 43.02 3.71
344 345 2.366533 ACTAGTTGCTTCCGATCTCGA 58.633 47.619 0.22 0.00 43.02 4.04
345 346 2.853731 ACTAGTTGCTTCCGATCTCG 57.146 50.000 0.00 0.00 39.44 4.04
347 348 2.678190 GCCAACTAGTTGCTTCCGATCT 60.678 50.000 27.05 0.00 39.16 2.75
348 349 1.666189 GCCAACTAGTTGCTTCCGATC 59.334 52.381 27.05 6.79 39.16 3.69
349 350 1.739067 GCCAACTAGTTGCTTCCGAT 58.261 50.000 27.05 0.00 39.16 4.18
350 351 0.669318 CGCCAACTAGTTGCTTCCGA 60.669 55.000 27.05 0.00 39.16 4.55
352 353 1.079503 CTCGCCAACTAGTTGCTTCC 58.920 55.000 27.05 14.50 39.16 3.46
353 354 0.444260 GCTCGCCAACTAGTTGCTTC 59.556 55.000 27.05 17.14 39.16 3.86
354 355 1.291877 CGCTCGCCAACTAGTTGCTT 61.292 55.000 27.05 0.00 39.16 3.91
355 356 1.738099 CGCTCGCCAACTAGTTGCT 60.738 57.895 27.05 0.00 39.16 3.91
358 359 1.004918 AAGCGCTCGCCAACTAGTT 60.005 52.632 12.06 1.12 43.17 2.24
359 360 1.446272 GAAGCGCTCGCCAACTAGT 60.446 57.895 12.06 0.00 43.17 2.57
360 361 0.737715 AAGAAGCGCTCGCCAACTAG 60.738 55.000 12.06 0.00 43.17 2.57
361 362 0.736325 GAAGAAGCGCTCGCCAACTA 60.736 55.000 12.06 0.00 43.17 2.24
362 363 2.029844 GAAGAAGCGCTCGCCAACT 61.030 57.895 12.06 0.00 43.17 3.16
364 365 2.029288 CTGAAGAAGCGCTCGCCAA 61.029 57.895 12.06 0.00 43.17 4.52
365 366 2.433145 CTGAAGAAGCGCTCGCCA 60.433 61.111 12.06 5.96 43.17 5.69
366 367 3.191539 CCTGAAGAAGCGCTCGCC 61.192 66.667 12.06 2.91 43.17 5.54
367 368 2.125912 TCCTGAAGAAGCGCTCGC 60.126 61.111 12.06 6.19 42.33 5.03
369 370 1.813337 GGCTCCTGAAGAAGCGCTC 60.813 63.158 12.06 4.30 0.00 5.03
370 371 2.237534 GAGGCTCCTGAAGAAGCGCT 62.238 60.000 2.64 2.64 0.00 5.92
371 372 1.813337 GAGGCTCCTGAAGAAGCGC 60.813 63.158 2.15 0.00 0.00 5.92
373 374 1.223211 GGGAGGCTCCTGAAGAAGC 59.777 63.158 31.39 9.86 36.57 3.86
375 376 1.352352 CTTTGGGAGGCTCCTGAAGAA 59.648 52.381 31.39 17.29 36.57 2.52
376 377 0.987294 CTTTGGGAGGCTCCTGAAGA 59.013 55.000 31.39 12.83 36.57 2.87
379 380 0.475632 TTCCTTTGGGAGGCTCCTGA 60.476 55.000 31.39 18.04 45.87 3.86
381 382 0.405973 GTTTCCTTTGGGAGGCTCCT 59.594 55.000 31.39 0.00 45.87 3.69
382 383 0.112412 TGTTTCCTTTGGGAGGCTCC 59.888 55.000 25.80 25.80 45.87 4.70
385 386 0.313987 CGTTGTTTCCTTTGGGAGGC 59.686 55.000 0.00 0.00 45.87 4.70
387 388 0.040425 CGCGTTGTTTCCTTTGGGAG 60.040 55.000 0.00 0.00 43.29 4.30
389 390 0.101579 AACGCGTTGTTTCCTTTGGG 59.898 50.000 26.00 0.00 37.59 4.12
390 391 3.633573 AACGCGTTGTTTCCTTTGG 57.366 47.368 26.00 0.00 37.59 3.28
441 442 1.021390 AACCATGCCTCTCGCGAAAG 61.021 55.000 11.33 6.30 42.08 2.62
443 444 1.741401 CAACCATGCCTCTCGCGAA 60.741 57.895 11.33 0.00 42.08 4.70
444 445 2.125552 CAACCATGCCTCTCGCGA 60.126 61.111 9.26 9.26 42.08 5.87
453 454 1.080569 CCCGAAAGCACAACCATGC 60.081 57.895 0.00 0.00 46.50 4.06
454 455 0.523072 CTCCCGAAAGCACAACCATG 59.477 55.000 0.00 0.00 0.00 3.66
458 459 1.578206 GCCTCTCCCGAAAGCACAAC 61.578 60.000 0.00 0.00 0.00 3.32
459 460 1.302511 GCCTCTCCCGAAAGCACAA 60.303 57.895 0.00 0.00 0.00 3.33
460 461 2.347490 GCCTCTCCCGAAAGCACA 59.653 61.111 0.00 0.00 0.00 4.57
461 462 2.035442 GTGCCTCTCCCGAAAGCAC 61.035 63.158 0.00 0.00 40.26 4.40
462 463 2.347490 GTGCCTCTCCCGAAAGCA 59.653 61.111 0.00 0.00 0.00 3.91
463 464 2.815647 CGTGCCTCTCCCGAAAGC 60.816 66.667 0.00 0.00 0.00 3.51
464 465 2.125512 CCGTGCCTCTCCCGAAAG 60.126 66.667 0.00 0.00 0.00 2.62
465 466 4.388499 GCCGTGCCTCTCCCGAAA 62.388 66.667 0.00 0.00 0.00 3.46
483 484 1.492319 TTTCGTTTCCGAGTGGCACG 61.492 55.000 12.71 0.53 45.24 5.34
484 485 0.658897 TTTTCGTTTCCGAGTGGCAC 59.341 50.000 10.29 10.29 45.24 5.01
485 486 1.380524 TTTTTCGTTTCCGAGTGGCA 58.619 45.000 0.00 0.00 45.24 4.92
501 502 6.342111 TCTTGCGGAAGGTAAAATTGTTTTT 58.658 32.000 17.16 0.00 38.56 1.94
502 503 5.908341 TCTTGCGGAAGGTAAAATTGTTTT 58.092 33.333 17.16 0.00 36.67 2.43
503 504 5.508994 CCTCTTGCGGAAGGTAAAATTGTTT 60.509 40.000 17.16 0.00 0.00 2.83
504 505 4.022329 CCTCTTGCGGAAGGTAAAATTGTT 60.022 41.667 17.16 0.00 0.00 2.83
505 506 3.506067 CCTCTTGCGGAAGGTAAAATTGT 59.494 43.478 17.16 0.00 0.00 2.71
507 508 2.492088 GCCTCTTGCGGAAGGTAAAATT 59.508 45.455 17.16 0.00 0.00 1.82
508 509 2.092323 GCCTCTTGCGGAAGGTAAAAT 58.908 47.619 17.16 0.00 0.00 1.82
509 510 1.202830 TGCCTCTTGCGGAAGGTAAAA 60.203 47.619 17.16 0.00 45.60 1.52
511 512 0.321298 GTGCCTCTTGCGGAAGGTAA 60.321 55.000 17.16 0.00 45.60 2.85
512 513 1.295423 GTGCCTCTTGCGGAAGGTA 59.705 57.895 17.16 0.00 45.60 3.08
513 514 2.032681 GTGCCTCTTGCGGAAGGT 59.967 61.111 17.16 0.00 45.60 3.50
514 515 3.121030 CGTGCCTCTTGCGGAAGG 61.121 66.667 17.16 3.26 45.60 3.46
519 520 1.370414 CAAAACCGTGCCTCTTGCG 60.370 57.895 0.00 0.00 45.60 4.85
520 521 1.661509 GCAAAACCGTGCCTCTTGC 60.662 57.895 0.00 0.00 38.66 4.01
521 522 0.385390 AAGCAAAACCGTGCCTCTTG 59.615 50.000 0.00 0.00 46.14 3.02
523 524 0.465460 TGAAGCAAAACCGTGCCTCT 60.465 50.000 0.00 0.00 46.14 3.69
526 527 1.661509 GCTGAAGCAAAACCGTGCC 60.662 57.895 0.00 0.00 46.14 5.01
527 528 3.922175 GCTGAAGCAAAACCGTGC 58.078 55.556 0.00 0.00 45.28 5.34
538 539 1.664321 GGCCATGCCTCTTGCTGAAG 61.664 60.000 0.00 0.00 46.69 3.02
539 540 1.679977 GGCCATGCCTCTTGCTGAA 60.680 57.895 0.00 0.00 46.69 3.02
580 581 9.471084 CGAAAGGGAAAATACATAAACTTGTTT 57.529 29.630 4.14 4.14 0.00 2.83
581 582 7.597369 GCGAAAGGGAAAATACATAAACTTGTT 59.403 33.333 0.00 0.00 0.00 2.83
582 583 7.088272 GCGAAAGGGAAAATACATAAACTTGT 58.912 34.615 0.00 0.00 0.00 3.16
583 584 7.506296 GCGAAAGGGAAAATACATAAACTTG 57.494 36.000 0.00 0.00 0.00 3.16
599 600 2.815647 GTGCCTCTCGCGAAAGGG 60.816 66.667 28.83 21.05 46.71 3.95
614 615 0.929824 CTCGCAAAAGCACAACCGTG 60.930 55.000 0.00 0.00 46.56 4.94
615 616 1.092921 TCTCGCAAAAGCACAACCGT 61.093 50.000 0.00 0.00 0.00 4.83
616 617 0.028770 TTCTCGCAAAAGCACAACCG 59.971 50.000 0.00 0.00 0.00 4.44
617 618 1.758783 CTTCTCGCAAAAGCACAACC 58.241 50.000 0.00 0.00 0.00 3.77
619 620 3.549997 GCTTCTCGCAAAAGCACAA 57.450 47.368 9.19 0.00 46.63 3.33
641 642 2.861006 GTTTTCGAGAGGCACGGC 59.139 61.111 0.00 0.00 0.00 5.68
673 674 2.828877 TGTCTCTCGCGAAAGGAAAAA 58.171 42.857 11.33 0.00 0.00 1.94
674 675 2.519377 TGTCTCTCGCGAAAGGAAAA 57.481 45.000 11.33 0.00 0.00 2.29
676 677 2.753452 ACTATGTCTCTCGCGAAAGGAA 59.247 45.455 11.33 0.00 0.00 3.36
677 678 2.366533 ACTATGTCTCTCGCGAAAGGA 58.633 47.619 11.33 2.88 0.00 3.36
678 679 2.853731 ACTATGTCTCTCGCGAAAGG 57.146 50.000 11.33 3.10 0.00 3.11
680 681 3.122948 GCAAAACTATGTCTCTCGCGAAA 59.877 43.478 11.33 0.00 0.00 3.46
681 682 2.666508 GCAAAACTATGTCTCTCGCGAA 59.333 45.455 11.33 0.00 0.00 4.70
682 683 2.094700 AGCAAAACTATGTCTCTCGCGA 60.095 45.455 9.26 9.26 0.00 5.87
683 684 2.263077 AGCAAAACTATGTCTCTCGCG 58.737 47.619 0.00 0.00 0.00 5.87
686 687 4.201666 CGCAGAAGCAAAACTATGTCTCTC 60.202 45.833 0.00 0.00 42.27 3.20
687 688 3.681897 CGCAGAAGCAAAACTATGTCTCT 59.318 43.478 0.00 0.00 42.27 3.10
689 690 3.664107 TCGCAGAAGCAAAACTATGTCT 58.336 40.909 0.00 0.00 42.27 3.41
690 691 3.679980 TCTCGCAGAAGCAAAACTATGTC 59.320 43.478 0.00 0.00 42.27 3.06
691 692 3.664107 TCTCGCAGAAGCAAAACTATGT 58.336 40.909 0.00 0.00 42.27 2.29
692 693 3.681897 ACTCTCGCAGAAGCAAAACTATG 59.318 43.478 0.00 0.00 42.27 2.23
693 694 3.929610 GACTCTCGCAGAAGCAAAACTAT 59.070 43.478 0.00 0.00 42.27 2.12
695 696 2.139118 GACTCTCGCAGAAGCAAAACT 58.861 47.619 0.00 0.00 42.27 2.66
696 697 1.867233 TGACTCTCGCAGAAGCAAAAC 59.133 47.619 0.00 0.00 42.27 2.43
697 698 1.867233 GTGACTCTCGCAGAAGCAAAA 59.133 47.619 0.00 0.00 42.27 2.44
698 699 1.502231 GTGACTCTCGCAGAAGCAAA 58.498 50.000 0.00 0.00 42.27 3.68
699 700 0.664466 CGTGACTCTCGCAGAAGCAA 60.664 55.000 0.00 0.00 42.27 3.91
701 702 1.803519 CCGTGACTCTCGCAGAAGC 60.804 63.158 0.00 0.00 34.09 3.86
703 704 0.318699 CAACCGTGACTCTCGCAGAA 60.319 55.000 0.00 0.00 34.09 3.02
704 705 1.285950 CAACCGTGACTCTCGCAGA 59.714 57.895 0.00 0.00 0.00 4.26
706 707 1.299850 CACAACCGTGACTCTCGCA 60.300 57.895 0.00 0.00 46.80 5.10
707 708 2.658707 GCACAACCGTGACTCTCGC 61.659 63.158 0.00 0.00 46.80 5.03
709 710 1.527311 GAAAGCACAACCGTGACTCTC 59.473 52.381 0.00 0.00 46.80 3.20
710 711 1.583054 GAAAGCACAACCGTGACTCT 58.417 50.000 0.00 0.00 46.80 3.24
712 713 0.461339 ACGAAAGCACAACCGTGACT 60.461 50.000 0.00 0.00 46.80 3.41
713 714 2.011453 ACGAAAGCACAACCGTGAC 58.989 52.632 0.00 0.00 46.80 3.67
715 716 4.588084 CACGAAAGCACAACCGTG 57.412 55.556 0.00 0.00 46.56 4.94
718 719 0.868406 CCTCTCACGAAAGCACAACC 59.132 55.000 0.00 0.00 0.00 3.77
719 720 0.235926 GCCTCTCACGAAAGCACAAC 59.764 55.000 0.00 0.00 0.00 3.32
720 721 0.179059 TGCCTCTCACGAAAGCACAA 60.179 50.000 0.00 0.00 0.00 3.33
721 722 0.880278 GTGCCTCTCACGAAAGCACA 60.880 55.000 8.45 0.00 43.62 4.57
722 723 1.862806 GTGCCTCTCACGAAAGCAC 59.137 57.895 0.00 0.00 40.26 4.40
723 724 4.361253 GTGCCTCTCACGAAAGCA 57.639 55.556 0.00 0.00 35.76 3.91
764 765 1.613437 CCGAACCAGGAGCATGTTTTT 59.387 47.619 0.00 0.00 0.00 1.94
765 766 1.247567 CCGAACCAGGAGCATGTTTT 58.752 50.000 0.00 0.00 0.00 2.43
766 767 0.110486 ACCGAACCAGGAGCATGTTT 59.890 50.000 0.00 0.00 34.73 2.83
767 768 0.110486 AACCGAACCAGGAGCATGTT 59.890 50.000 0.00 0.00 34.73 2.71
768 769 0.110486 AAACCGAACCAGGAGCATGT 59.890 50.000 0.00 0.00 34.73 3.21
769 770 1.247567 AAAACCGAACCAGGAGCATG 58.752 50.000 0.00 0.00 34.73 4.06
770 771 1.886542 GAAAAACCGAACCAGGAGCAT 59.113 47.619 0.00 0.00 34.73 3.79
771 772 1.314730 GAAAAACCGAACCAGGAGCA 58.685 50.000 0.00 0.00 34.73 4.26
772 773 1.266989 CTGAAAAACCGAACCAGGAGC 59.733 52.381 0.00 0.00 34.73 4.70
773 774 2.548480 GACTGAAAAACCGAACCAGGAG 59.452 50.000 0.00 0.00 34.73 3.69
774 775 2.171870 AGACTGAAAAACCGAACCAGGA 59.828 45.455 0.00 0.00 34.73 3.86
776 777 2.943033 ACAGACTGAAAAACCGAACCAG 59.057 45.455 10.08 0.00 0.00 4.00
812 813 5.184287 TCTCCAAGTGTTTTCGAACCTTTTT 59.816 36.000 0.00 0.00 0.00 1.94
813 814 4.703093 TCTCCAAGTGTTTTCGAACCTTTT 59.297 37.500 0.00 0.00 0.00 2.27
814 815 4.266714 TCTCCAAGTGTTTTCGAACCTTT 58.733 39.130 0.00 0.00 0.00 3.11
815 816 3.881220 TCTCCAAGTGTTTTCGAACCTT 58.119 40.909 0.00 0.00 0.00 3.50
817 818 5.934935 TTATCTCCAAGTGTTTTCGAACC 57.065 39.130 0.00 0.00 0.00 3.62
818 819 7.268447 CGAAATTATCTCCAAGTGTTTTCGAAC 59.732 37.037 0.00 0.00 43.96 3.95
820 821 6.128391 CCGAAATTATCTCCAAGTGTTTTCGA 60.128 38.462 13.97 0.00 43.96 3.71
822 823 7.141100 TCCGAAATTATCTCCAAGTGTTTTC 57.859 36.000 0.00 0.00 0.00 2.29
824 825 7.519032 TTTCCGAAATTATCTCCAAGTGTTT 57.481 32.000 0.00 0.00 0.00 2.83
825 826 7.230712 AGTTTTCCGAAATTATCTCCAAGTGTT 59.769 33.333 0.00 0.00 0.00 3.32
826 827 6.715264 AGTTTTCCGAAATTATCTCCAAGTGT 59.285 34.615 0.00 0.00 0.00 3.55
829 830 7.029563 CCAAGTTTTCCGAAATTATCTCCAAG 58.970 38.462 0.00 0.00 0.00 3.61
886 888 7.072030 CGTCTATATTTTGCAGCTGGAATTAC 58.928 38.462 22.04 10.58 0.00 1.89
887 889 6.765989 ACGTCTATATTTTGCAGCTGGAATTA 59.234 34.615 22.04 15.97 0.00 1.40
897 899 6.167685 AGTACCAACACGTCTATATTTTGCA 58.832 36.000 0.00 0.00 0.00 4.08
916 918 3.308438 TTCGCTCTGGTGTTAAGTACC 57.692 47.619 2.53 2.53 38.71 3.34
923 925 0.537188 ATCCGATTCGCTCTGGTGTT 59.463 50.000 0.00 0.00 0.00 3.32
978 980 2.908688 TTATAGCTGCGGATCAAGCA 57.091 45.000 13.34 13.34 42.99 3.91
979 981 3.999663 AGATTTATAGCTGCGGATCAAGC 59.000 43.478 0.00 5.57 0.00 4.01
980 982 6.625362 TCTAGATTTATAGCTGCGGATCAAG 58.375 40.000 0.00 0.00 0.00 3.02
983 985 5.808030 GGTTCTAGATTTATAGCTGCGGATC 59.192 44.000 0.00 0.00 0.00 3.36
984 986 5.246203 TGGTTCTAGATTTATAGCTGCGGAT 59.754 40.000 0.00 0.00 0.00 4.18
986 988 4.883083 TGGTTCTAGATTTATAGCTGCGG 58.117 43.478 0.00 0.00 0.00 5.69
991 993 5.470437 GGCAGGTTGGTTCTAGATTTATAGC 59.530 44.000 0.00 0.00 0.00 2.97
994 996 4.451900 CGGCAGGTTGGTTCTAGATTTAT 58.548 43.478 0.00 0.00 0.00 1.40
995 997 3.869065 CGGCAGGTTGGTTCTAGATTTA 58.131 45.455 0.00 0.00 0.00 1.40
996 998 2.711542 CGGCAGGTTGGTTCTAGATTT 58.288 47.619 0.00 0.00 0.00 2.17
997 999 1.679032 GCGGCAGGTTGGTTCTAGATT 60.679 52.381 0.00 0.00 0.00 2.40
1135 2903 1.081041 CGTCGATGGTCCGTGTGAA 60.081 57.895 0.00 0.00 0.00 3.18
1162 2930 2.046507 GGCAGGAGCTGACAGGTG 60.047 66.667 12.82 0.00 39.71 4.00
1192 2960 2.348998 CCGCTCTTCTTGCTGGGT 59.651 61.111 0.00 0.00 0.00 4.51
1217 2985 3.321497 AGAAGACGCATCTGAAGTTGAC 58.679 45.455 0.00 0.00 34.48 3.18
1338 3109 3.072468 CGTGGGGGTCGAAGGCTA 61.072 66.667 0.00 0.00 0.00 3.93
1706 4147 0.460311 CGTGGCCTAGGAACCTGTAG 59.540 60.000 14.75 0.00 0.00 2.74
1726 4167 2.512286 CACTGGCGTGGCATCGAT 60.512 61.111 12.46 0.00 37.50 3.59
1926 4398 1.141881 CCATCCTTCCTCGTCCACG 59.858 63.158 0.00 0.00 41.45 4.94
1957 4429 1.594293 CAGGAACAACACGCGGTCT 60.594 57.895 12.47 0.00 0.00 3.85
2119 4591 3.209410 CAGCCACTTGAGAAACTCTGTT 58.791 45.455 0.00 0.00 0.00 3.16
2129 4601 1.975407 CTTGGGGCAGCCACTTGAG 60.975 63.158 16.83 6.57 0.00 3.02
2132 4604 2.551413 ATCCTTGGGGCAGCCACTT 61.551 57.895 16.83 0.00 0.00 3.16
2155 4627 0.391130 GCCACACGCACATCTCCTTA 60.391 55.000 0.00 0.00 37.47 2.69
2321 4839 1.880027 CTTGCCACCAAACAGTCTACC 59.120 52.381 0.00 0.00 0.00 3.18
2417 4937 1.215647 GTCGACGCCTCTGTTCCAT 59.784 57.895 0.00 0.00 0.00 3.41
2520 5043 9.559732 TCAATAACTGGACCATGATAACTATTG 57.440 33.333 0.00 2.15 0.00 1.90
2576 5101 7.387948 ACTGATAAATTCGCTACATATTGGACC 59.612 37.037 0.00 0.00 0.00 4.46
2600 5125 4.396790 GCTATATACTGAGCCGAGCTAACT 59.603 45.833 0.00 0.00 39.88 2.24
2614 5139 2.606751 ACTCTGGCGGGCTATATACT 57.393 50.000 2.38 0.00 0.00 2.12
2721 5259 1.516161 GCAGTGATGTGCAAGTCTCA 58.484 50.000 0.00 0.00 43.41 3.27
2754 5292 4.026310 GCAATTTGATCGGCAATGATTGAC 60.026 41.667 9.76 4.87 37.08 3.18
3014 5553 2.030540 GGAACCGGTAAAAGGTCTTTGC 60.031 50.000 8.00 0.00 41.95 3.68
3180 5975 4.826616 TGGAGGAGAGAGATAGAGAGAGA 58.173 47.826 0.00 0.00 0.00 3.10
3237 6032 1.068250 GGTAGGCTAAGGCGCTCTG 59.932 63.158 7.64 0.00 39.81 3.35
3242 6037 2.675317 GCAGATATGGTAGGCTAAGGCG 60.675 54.545 0.00 0.00 39.81 5.52
3263 6058 1.202582 AGTCGGACGAAGAATGAGTGG 59.797 52.381 1.89 0.00 0.00 4.00
3276 6071 3.632604 TCAGTCAATCCTATGAGTCGGAC 59.367 47.826 0.00 0.00 30.57 4.79
3283 6078 8.576442 GTTTTCCTTTTTCAGTCAATCCTATGA 58.424 33.333 0.00 0.00 0.00 2.15
3285 6080 8.360390 GTGTTTTCCTTTTTCAGTCAATCCTAT 58.640 33.333 0.00 0.00 0.00 2.57
3286 6081 7.340743 TGTGTTTTCCTTTTTCAGTCAATCCTA 59.659 33.333 0.00 0.00 0.00 2.94
3287 6082 6.154363 TGTGTTTTCCTTTTTCAGTCAATCCT 59.846 34.615 0.00 0.00 0.00 3.24
3288 6083 6.337356 TGTGTTTTCCTTTTTCAGTCAATCC 58.663 36.000 0.00 0.00 0.00 3.01
3289 6084 6.019559 GCTGTGTTTTCCTTTTTCAGTCAATC 60.020 38.462 0.00 0.00 0.00 2.67
3290 6085 5.812127 GCTGTGTTTTCCTTTTTCAGTCAAT 59.188 36.000 0.00 0.00 0.00 2.57
3291 6086 5.167845 GCTGTGTTTTCCTTTTTCAGTCAA 58.832 37.500 0.00 0.00 0.00 3.18
3292 6087 4.381505 GGCTGTGTTTTCCTTTTTCAGTCA 60.382 41.667 0.00 0.00 0.00 3.41
3293 6088 4.112634 GGCTGTGTTTTCCTTTTTCAGTC 58.887 43.478 0.00 0.00 0.00 3.51
3294 6089 3.769300 AGGCTGTGTTTTCCTTTTTCAGT 59.231 39.130 0.00 0.00 0.00 3.41
3295 6090 4.391405 AGGCTGTGTTTTCCTTTTTCAG 57.609 40.909 0.00 0.00 0.00 3.02
3296 6091 4.020662 ACAAGGCTGTGTTTTCCTTTTTCA 60.021 37.500 0.00 0.00 38.08 2.69
3297 6092 4.329801 CACAAGGCTGTGTTTTCCTTTTTC 59.670 41.667 8.37 0.00 46.68 2.29
3298 6093 4.252878 CACAAGGCTGTGTTTTCCTTTTT 58.747 39.130 8.37 0.00 46.68 1.94
3299 6094 3.860641 CACAAGGCTGTGTTTTCCTTTT 58.139 40.909 8.37 0.00 46.68 2.27
3327 6122 9.090103 AGTATATACATGGTTGTGCAGTATAGT 57.910 33.333 15.18 0.00 36.53 2.12
3377 6175 4.376340 GCAAGCAAGTGCAGGTATAAAT 57.624 40.909 6.00 0.00 44.29 1.40
3390 6188 1.135315 ACACACACACAAGCAAGCAAG 60.135 47.619 0.00 0.00 0.00 4.01
3391 6189 0.887247 ACACACACACAAGCAAGCAA 59.113 45.000 0.00 0.00 0.00 3.91
3392 6190 0.170784 CACACACACACAAGCAAGCA 59.829 50.000 0.00 0.00 0.00 3.91
3393 6191 0.171007 ACACACACACACAAGCAAGC 59.829 50.000 0.00 0.00 0.00 4.01
3421 6219 3.773630 ACACATACACGCACGCGC 61.774 61.111 12.02 0.00 44.19 6.86
3422 6220 1.338526 TACACACATACACGCACGCG 61.339 55.000 10.36 10.36 46.03 6.01
3423 6221 0.785378 TTACACACATACACGCACGC 59.215 50.000 0.00 0.00 0.00 5.34
3424 6222 2.664085 TGATTACACACATACACGCACG 59.336 45.455 0.00 0.00 0.00 5.34
3425 6223 3.924073 TCTGATTACACACATACACGCAC 59.076 43.478 0.00 0.00 0.00 5.34
3426 6224 4.181309 TCTGATTACACACATACACGCA 57.819 40.909 0.00 0.00 0.00 5.24
3427 6225 5.492854 CATTCTGATTACACACATACACGC 58.507 41.667 0.00 0.00 0.00 5.34
3428 6226 5.291858 AGCATTCTGATTACACACATACACG 59.708 40.000 0.00 0.00 0.00 4.49
3429 6227 6.668541 AGCATTCTGATTACACACATACAC 57.331 37.500 0.00 0.00 0.00 2.90
3430 6228 6.878389 TCAAGCATTCTGATTACACACATACA 59.122 34.615 0.00 0.00 0.00 2.29
3431 6229 7.307493 TCAAGCATTCTGATTACACACATAC 57.693 36.000 0.00 0.00 0.00 2.39
3432 6230 6.539826 CCTCAAGCATTCTGATTACACACATA 59.460 38.462 0.00 0.00 0.00 2.29
3433 6231 5.356190 CCTCAAGCATTCTGATTACACACAT 59.644 40.000 0.00 0.00 0.00 3.21
3434 6232 4.696877 CCTCAAGCATTCTGATTACACACA 59.303 41.667 0.00 0.00 0.00 3.72
3435 6233 4.697352 ACCTCAAGCATTCTGATTACACAC 59.303 41.667 0.00 0.00 0.00 3.82
3436 6234 4.910195 ACCTCAAGCATTCTGATTACACA 58.090 39.130 0.00 0.00 0.00 3.72
3437 6235 5.064452 CAGACCTCAAGCATTCTGATTACAC 59.936 44.000 0.00 0.00 38.19 2.90
3438 6236 5.181009 CAGACCTCAAGCATTCTGATTACA 58.819 41.667 0.00 0.00 38.19 2.41
3439 6237 5.181748 ACAGACCTCAAGCATTCTGATTAC 58.818 41.667 4.51 0.00 38.19 1.89
3440 6238 5.426689 ACAGACCTCAAGCATTCTGATTA 57.573 39.130 4.51 0.00 38.19 1.75
3441 6239 4.298103 ACAGACCTCAAGCATTCTGATT 57.702 40.909 4.51 0.00 38.19 2.57
3456 6254 3.281727 TGCCCATGATTTCTACAGACC 57.718 47.619 0.00 0.00 0.00 3.85
3457 6255 5.841957 AATTGCCCATGATTTCTACAGAC 57.158 39.130 0.00 0.00 0.00 3.51
3481 6279 1.269883 ACATGCGTGTACGACCTGAAA 60.270 47.619 10.57 0.00 43.02 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.