Multiple sequence alignment - TraesCS3D01G531900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G531900 chr3D 100.000 2846 0 0 1 2846 607921801 607924646 0.000000e+00 5256
1 TraesCS3D01G531900 chr3D 84.492 187 28 1 1380 1566 467318791 467318976 1.740000e-42 183
2 TraesCS3D01G531900 chr3B 88.895 1945 92 47 391 2277 817576788 817578666 0.000000e+00 2281
3 TraesCS3D01G531900 chr3B 85.027 187 27 1 1380 1566 621297520 621297705 3.740000e-44 189
4 TraesCS3D01G531900 chr3B 88.321 137 15 1 625 761 817574536 817574671 2.270000e-36 163
5 TraesCS3D01G531900 chr3B 84.211 152 16 4 185 328 817576555 817576706 1.060000e-29 141
6 TraesCS3D01G531900 chr3A 91.582 1485 64 18 823 2277 740114149 740112696 0.000000e+00 1993
7 TraesCS3D01G531900 chr3A 75.926 864 105 52 1 805 740118182 740117363 5.840000e-92 348
8 TraesCS3D01G531900 chr3A 84.512 297 23 9 185 471 740114717 740114434 3.610000e-69 272
9 TraesCS3D01G531900 chr3A 83.746 283 18 14 516 781 740114418 740114147 2.830000e-60 243
10 TraesCS3D01G531900 chr3A 84.946 186 27 1 1381 1566 609959788 609959972 1.350000e-43 187
11 TraesCS3D01G531900 chr3A 82.270 141 15 4 2499 2639 740112700 740112570 2.320000e-21 113
12 TraesCS3D01G531900 chr6D 91.071 224 16 3 2278 2498 84631377 84631599 1.660000e-77 300
13 TraesCS3D01G531900 chr1B 88.776 196 22 0 1391 1586 472634231 472634426 1.020000e-59 241
14 TraesCS3D01G531900 chr1B 85.650 223 28 4 2278 2498 343264516 343264296 6.130000e-57 231
15 TraesCS3D01G531900 chr4A 88.384 198 19 4 2304 2499 721118149 721118344 4.740000e-58 235


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G531900 chr3D 607921801 607924646 2845 False 5256.000000 5256 100.000000 1 2846 1 chr3D.!!$F2 2845
1 TraesCS3D01G531900 chr3B 817574536 817578666 4130 False 861.666667 2281 87.142333 185 2277 3 chr3B.!!$F2 2092
2 TraesCS3D01G531900 chr3A 740112570 740118182 5612 True 593.800000 1993 83.607200 1 2639 5 chr3A.!!$R1 2638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
336 4313 0.035317 TCTATCCACCATCCATGCGC 59.965 55.0 0.0 0.0 0.0 6.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2196 6301 0.179179 GGCAGCAGTTCAAGATTCGC 60.179 55.0 0.0 0.0 0.0 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.604912 AAGGTCTCAAAACCCATCCC 57.395 50.000 0.00 0.00 40.42 3.85
35 37 3.696548 CCCATCCCTAAGACAAGAAAAGC 59.303 47.826 0.00 0.00 0.00 3.51
36 38 3.375299 CCATCCCTAAGACAAGAAAAGCG 59.625 47.826 0.00 0.00 0.00 4.68
39 41 1.464189 CCTAAGACAAGAAAAGCGCGC 60.464 52.381 26.66 26.66 0.00 6.86
48 50 0.434628 GAAAAGCGCGCCATGAAAAC 59.565 50.000 30.33 7.70 0.00 2.43
49 51 0.249238 AAAAGCGCGCCATGAAAACA 60.249 45.000 30.33 0.00 0.00 2.83
51 53 0.249238 AAGCGCGCCATGAAAACAAA 60.249 45.000 30.33 0.00 0.00 2.83
52 54 0.664166 AGCGCGCCATGAAAACAAAG 60.664 50.000 30.33 0.00 0.00 2.77
53 55 0.939106 GCGCGCCATGAAAACAAAGT 60.939 50.000 23.24 0.00 0.00 2.66
54 56 1.664588 GCGCGCCATGAAAACAAAGTA 60.665 47.619 23.24 0.00 0.00 2.24
55 57 2.656085 CGCGCCATGAAAACAAAGTAA 58.344 42.857 0.00 0.00 0.00 2.24
80 82 0.040425 ACATTTGTTTCTCACGCGCC 60.040 50.000 5.73 0.00 0.00 6.53
81 83 0.238289 CATTTGTTTCTCACGCGCCT 59.762 50.000 5.73 0.00 0.00 5.52
92 94 0.373716 CACGCGCCTCCTCAATTAAC 59.626 55.000 5.73 0.00 0.00 2.01
94 96 0.373716 CGCGCCTCCTCAATTAACAC 59.626 55.000 0.00 0.00 0.00 3.32
98 100 1.006832 CCTCCTCAATTAACACGCGG 58.993 55.000 12.47 1.27 0.00 6.46
104 117 3.428452 CCTCAATTAACACGCGGTCTCTA 60.428 47.826 12.47 0.00 0.00 2.43
105 118 4.171005 CTCAATTAACACGCGGTCTCTAA 58.829 43.478 12.47 2.20 0.00 2.10
136 149 9.705290 ATATAAAATGAGTTTTGGTTCCACAAC 57.295 29.630 11.52 11.52 38.01 3.32
138 151 5.612725 AATGAGTTTTGGTTCCACAACAT 57.387 34.783 18.83 6.03 33.70 2.71
141 154 6.531503 TGAGTTTTGGTTCCACAACATTTA 57.468 33.333 18.83 4.02 33.70 1.40
220 4185 8.177119 TCCTTAATGCGCAAATTAAATATCCT 57.823 30.769 17.11 0.00 32.92 3.24
222 4187 9.559958 CCTTAATGCGCAAATTAAATATCCTAG 57.440 33.333 17.11 1.18 32.92 3.02
261 4231 8.488651 ACAAAAATATCTATCGTCGGAACTTT 57.511 30.769 0.00 0.00 0.00 2.66
272 4242 5.782047 TCGTCGGAACTTTATACCAAGAAA 58.218 37.500 0.00 0.00 0.00 2.52
277 4247 4.401519 GGAACTTTATACCAAGAAAGGCCC 59.598 45.833 0.00 0.00 38.07 5.80
329 4306 4.622695 GCTAGGCAGAATCTATCCACCATC 60.623 50.000 4.04 0.00 0.00 3.51
330 4307 2.641815 AGGCAGAATCTATCCACCATCC 59.358 50.000 4.04 0.00 0.00 3.51
331 4308 2.373169 GGCAGAATCTATCCACCATCCA 59.627 50.000 0.00 0.00 0.00 3.41
332 4309 3.009916 GGCAGAATCTATCCACCATCCAT 59.990 47.826 0.00 0.00 0.00 3.41
333 4310 4.008330 GCAGAATCTATCCACCATCCATG 58.992 47.826 0.00 0.00 0.00 3.66
334 4311 4.008330 CAGAATCTATCCACCATCCATGC 58.992 47.826 0.00 0.00 0.00 4.06
335 4312 2.775911 ATCTATCCACCATCCATGCG 57.224 50.000 0.00 0.00 0.00 4.73
336 4313 0.035317 TCTATCCACCATCCATGCGC 59.965 55.000 0.00 0.00 0.00 6.09
337 4314 0.250424 CTATCCACCATCCATGCGCA 60.250 55.000 14.96 14.96 0.00 6.09
338 4315 0.182299 TATCCACCATCCATGCGCAA 59.818 50.000 17.11 0.00 0.00 4.85
339 4316 1.105167 ATCCACCATCCATGCGCAAG 61.105 55.000 17.11 10.85 43.44 4.01
340 4317 1.750018 CCACCATCCATGCGCAAGA 60.750 57.895 17.11 15.78 43.02 3.02
341 4318 1.314534 CCACCATCCATGCGCAAGAA 61.315 55.000 17.11 2.09 43.02 2.52
342 4319 0.527113 CACCATCCATGCGCAAGAAA 59.473 50.000 17.11 1.49 43.02 2.52
343 4320 0.813184 ACCATCCATGCGCAAGAAAG 59.187 50.000 17.11 12.44 43.02 2.62
367 4345 6.594284 GAATTTGGATTCCAATAAGCAAGC 57.406 37.500 18.62 0.56 43.55 4.01
368 4346 5.680594 ATTTGGATTCCAATAAGCAAGCA 57.319 34.783 18.62 1.22 43.55 3.91
369 4347 4.454728 TTGGATTCCAATAAGCAAGCAC 57.545 40.909 14.24 0.00 38.75 4.40
413 4422 2.435586 CTGAGCTTGACCGGGCAG 60.436 66.667 11.51 6.19 0.00 4.85
435 4446 2.238898 GCTAAGCAAAAGTCTCCCCCTA 59.761 50.000 0.00 0.00 0.00 3.53
501 4512 1.429021 CCACCAACGGAATCGCATG 59.571 57.895 0.00 0.00 40.63 4.06
518 4529 0.108615 ATGAGAGAAAGCGACGTGGG 60.109 55.000 0.00 0.00 0.00 4.61
618 4641 2.435938 GCCATGCGGAAAGGACGA 60.436 61.111 2.92 0.00 0.00 4.20
698 4722 3.848272 TCTGCGCTTTATTCCCTTTTG 57.152 42.857 9.73 0.00 0.00 2.44
771 4800 5.723860 AATATCTTCTTTCTTCCCCTGCT 57.276 39.130 0.00 0.00 0.00 4.24
773 4802 3.146104 TCTTCTTTCTTCCCCTGCTTG 57.854 47.619 0.00 0.00 0.00 4.01
778 4807 0.620556 TTCTTCCCCTGCTTGGCTAG 59.379 55.000 0.00 0.00 0.00 3.42
779 4808 1.225704 CTTCCCCTGCTTGGCTAGG 59.774 63.158 0.00 0.00 0.00 3.02
780 4809 2.900671 CTTCCCCTGCTTGGCTAGGC 62.901 65.000 9.85 9.85 32.58 3.93
781 4810 3.415087 CCCCTGCTTGGCTAGGCT 61.415 66.667 18.18 0.00 32.58 4.58
782 4811 2.191641 CCCTGCTTGGCTAGGCTC 59.808 66.667 18.18 7.28 32.58 4.70
783 4812 2.191641 CCTGCTTGGCTAGGCTCC 59.808 66.667 18.18 6.20 0.00 4.70
784 4813 2.191641 CTGCTTGGCTAGGCTCCC 59.808 66.667 18.18 5.84 0.00 4.30
785 4814 3.411517 TGCTTGGCTAGGCTCCCC 61.412 66.667 18.18 4.10 0.00 4.81
786 4815 4.196778 GCTTGGCTAGGCTCCCCC 62.197 72.222 18.18 0.00 0.00 5.40
904 4937 1.299926 GATCGGGTGATTCGTCGGG 60.300 63.158 0.00 0.00 34.09 5.14
905 4938 2.694829 GATCGGGTGATTCGTCGGGG 62.695 65.000 0.00 0.00 34.09 5.73
907 4940 3.782443 GGGTGATTCGTCGGGGCT 61.782 66.667 0.00 0.00 0.00 5.19
908 4941 2.511600 GGTGATTCGTCGGGGCTG 60.512 66.667 0.00 0.00 0.00 4.85
909 4942 2.511600 GTGATTCGTCGGGGCTGG 60.512 66.667 0.00 0.00 0.00 4.85
915 4948 3.781307 CGTCGGGGCTGGATTGGA 61.781 66.667 0.00 0.00 0.00 3.53
949 4982 2.158682 GGCTGGGTTGGGTTGAATTTTT 60.159 45.455 0.00 0.00 0.00 1.94
997 5030 2.418368 TCCGTCCAATCCAATCCAAG 57.582 50.000 0.00 0.00 0.00 3.61
1044 5077 0.323451 ATTTTGACTTCGGGGGAGGC 60.323 55.000 0.00 0.00 0.00 4.70
1208 5241 4.357947 GCTCCTCGACGTGCACCA 62.358 66.667 12.15 0.00 0.00 4.17
1470 5542 3.207669 CTGGGCATCAAGAGCGCC 61.208 66.667 2.29 5.05 45.47 6.53
1701 5779 1.001393 CATGTACCACCACCACCCC 60.001 63.158 0.00 0.00 0.00 4.95
1862 5940 5.533482 CCAGTAGGTGAAGATAAAGATCGG 58.467 45.833 0.00 0.00 37.15 4.18
1865 5943 4.674281 AGGTGAAGATAAAGATCGGTCC 57.326 45.455 0.00 0.00 37.15 4.46
1866 5944 4.030913 AGGTGAAGATAAAGATCGGTCCA 58.969 43.478 0.00 0.00 37.15 4.02
1901 5979 2.816689 CAGATGCTCTGCTTCTCTCTG 58.183 52.381 5.20 0.00 40.30 3.35
1902 5980 1.137479 AGATGCTCTGCTTCTCTCTGC 59.863 52.381 2.70 0.00 38.40 4.26
1914 5995 1.942657 TCTCTCTGCTTGTGTGTTTGC 59.057 47.619 0.00 0.00 0.00 3.68
1940 6021 3.070015 TGCTCATCAGTCAGTCAACAGAA 59.930 43.478 0.00 0.00 0.00 3.02
1981 6062 0.673985 CAGTCGGTCAGTCAGTCCAA 59.326 55.000 0.00 0.00 0.00 3.53
2006 6087 2.352225 CCATCGTCAGTCTAGCATAGGC 60.352 54.545 0.00 0.00 45.65 3.93
2007 6088 1.319541 TCGTCAGTCTAGCATAGGCC 58.680 55.000 0.00 0.00 46.77 5.19
2008 6089 1.133761 TCGTCAGTCTAGCATAGGCCT 60.134 52.381 11.78 11.78 46.77 5.19
2009 6090 1.000827 CGTCAGTCTAGCATAGGCCTG 60.001 57.143 17.99 0.25 46.77 4.85
2010 6091 2.035632 GTCAGTCTAGCATAGGCCTGT 58.964 52.381 17.99 5.57 46.77 4.00
2011 6092 2.034878 TCAGTCTAGCATAGGCCTGTG 58.965 52.381 24.28 24.28 46.77 3.66
2017 6098 0.036010 AGCATAGGCCTGTGTGTGTC 60.036 55.000 27.96 12.82 42.56 3.67
2020 6101 0.532573 ATAGGCCTGTGTGTGTCTCG 59.467 55.000 17.99 0.00 0.00 4.04
2063 6150 1.407258 GCGGCTGGGCATAATTGTTAA 59.593 47.619 0.00 0.00 0.00 2.01
2117 6207 0.685097 CTGAAGTGAAGTTCCCGGGA 59.315 55.000 22.63 22.63 0.00 5.14
2126 6216 4.037927 TGAAGTTCCCGGGATAAGAAGAT 58.962 43.478 27.48 4.82 0.00 2.40
2127 6217 4.473559 TGAAGTTCCCGGGATAAGAAGATT 59.526 41.667 27.48 10.16 0.00 2.40
2129 6219 5.810080 AGTTCCCGGGATAAGAAGATTAG 57.190 43.478 27.48 0.00 0.00 1.73
2130 6220 4.040584 AGTTCCCGGGATAAGAAGATTAGC 59.959 45.833 27.48 0.00 0.00 3.09
2133 6229 4.597507 TCCCGGGATAAGAAGATTAGCAAT 59.402 41.667 22.63 0.00 0.00 3.56
2139 6235 8.713271 CGGGATAAGAAGATTAGCAATAAGAAC 58.287 37.037 0.00 0.00 0.00 3.01
2196 6301 3.599343 TGTAATACTGCTGCTGGAACTG 58.401 45.455 11.29 0.00 0.00 3.16
2277 6387 6.155049 CCAACAAGGGAATTAGGATTGTGATT 59.845 38.462 0.00 0.00 34.50 2.57
2278 6388 6.780457 ACAAGGGAATTAGGATTGTGATTG 57.220 37.500 0.00 0.00 33.09 2.67
2279 6389 6.493166 ACAAGGGAATTAGGATTGTGATTGA 58.507 36.000 0.00 0.00 33.09 2.57
2280 6390 7.128077 ACAAGGGAATTAGGATTGTGATTGAT 58.872 34.615 0.00 0.00 33.09 2.57
2281 6391 8.281531 ACAAGGGAATTAGGATTGTGATTGATA 58.718 33.333 0.00 0.00 33.09 2.15
2282 6392 9.135189 CAAGGGAATTAGGATTGTGATTGATAA 57.865 33.333 0.00 0.00 0.00 1.75
2284 6394 7.725844 AGGGAATTAGGATTGTGATTGATAACC 59.274 37.037 0.00 0.00 0.00 2.85
2285 6395 7.725844 GGGAATTAGGATTGTGATTGATAACCT 59.274 37.037 0.00 0.00 0.00 3.50
2286 6396 9.793259 GGAATTAGGATTGTGATTGATAACCTA 57.207 33.333 0.00 0.00 0.00 3.08
2290 6400 9.559732 TTAGGATTGTGATTGATAACCTACATG 57.440 33.333 0.00 0.00 0.00 3.21
2291 6401 7.577303 AGGATTGTGATTGATAACCTACATGT 58.423 34.615 2.69 2.69 0.00 3.21
2292 6402 8.713971 AGGATTGTGATTGATAACCTACATGTA 58.286 33.333 5.25 5.25 0.00 2.29
2293 6403 9.507329 GGATTGTGATTGATAACCTACATGTAT 57.493 33.333 5.91 0.00 0.00 2.29
2295 6405 9.851686 ATTGTGATTGATAACCTACATGTATGT 57.148 29.630 5.91 7.01 44.48 2.29
2302 6412 9.981114 TTGATAACCTACATGTATGTATGAGTG 57.019 33.333 13.33 0.00 41.92 3.51
2303 6413 9.143155 TGATAACCTACATGTATGTATGAGTGT 57.857 33.333 13.33 0.55 41.92 3.55
2304 6414 9.411801 GATAACCTACATGTATGTATGAGTGTG 57.588 37.037 13.33 0.00 41.92 3.82
2305 6415 7.418337 AACCTACATGTATGTATGAGTGTGA 57.582 36.000 13.33 0.00 41.92 3.58
2306 6416 7.043961 ACCTACATGTATGTATGAGTGTGAG 57.956 40.000 11.58 0.00 41.92 3.51
2307 6417 5.923114 CCTACATGTATGTATGAGTGTGAGC 59.077 44.000 5.91 0.00 41.92 4.26
2308 6418 5.604758 ACATGTATGTATGAGTGTGAGCT 57.395 39.130 0.00 0.00 39.68 4.09
2309 6419 5.982356 ACATGTATGTATGAGTGTGAGCTT 58.018 37.500 0.00 0.00 39.68 3.74
2310 6420 6.409704 ACATGTATGTATGAGTGTGAGCTTT 58.590 36.000 0.00 0.00 39.68 3.51
2311 6421 6.314648 ACATGTATGTATGAGTGTGAGCTTTG 59.685 38.462 0.00 0.00 39.68 2.77
2312 6422 5.793817 TGTATGTATGAGTGTGAGCTTTGT 58.206 37.500 0.00 0.00 0.00 2.83
2313 6423 6.930731 TGTATGTATGAGTGTGAGCTTTGTA 58.069 36.000 0.00 0.00 0.00 2.41
2314 6424 6.811665 TGTATGTATGAGTGTGAGCTTTGTAC 59.188 38.462 0.00 0.00 0.00 2.90
2315 6425 4.234574 TGTATGAGTGTGAGCTTTGTACG 58.765 43.478 0.00 0.00 0.00 3.67
2316 6426 2.882927 TGAGTGTGAGCTTTGTACGT 57.117 45.000 0.00 0.00 0.00 3.57
2317 6427 3.994204 TGAGTGTGAGCTTTGTACGTA 57.006 42.857 0.00 0.00 0.00 3.57
2318 6428 3.897325 TGAGTGTGAGCTTTGTACGTAG 58.103 45.455 0.00 0.00 0.00 3.51
2320 6430 3.898529 AGTGTGAGCTTTGTACGTAGTC 58.101 45.455 0.00 0.00 43.93 2.59
2321 6431 3.568853 AGTGTGAGCTTTGTACGTAGTCT 59.431 43.478 0.00 0.00 43.93 3.24
2322 6432 4.758674 AGTGTGAGCTTTGTACGTAGTCTA 59.241 41.667 0.00 0.00 43.93 2.59
2323 6433 4.850470 GTGTGAGCTTTGTACGTAGTCTAC 59.150 45.833 0.00 0.00 43.93 2.59
2341 6451 6.704512 GTCTACGGTATAGACTAGTGTAGC 57.295 45.833 0.00 0.00 40.43 3.58
2342 6452 6.219473 GTCTACGGTATAGACTAGTGTAGCA 58.781 44.000 0.00 0.00 40.43 3.49
2343 6453 6.873076 GTCTACGGTATAGACTAGTGTAGCAT 59.127 42.308 0.00 0.00 40.43 3.79
2344 6454 5.943706 ACGGTATAGACTAGTGTAGCATG 57.056 43.478 0.00 0.00 0.00 4.06
2345 6455 4.215827 ACGGTATAGACTAGTGTAGCATGC 59.784 45.833 10.51 10.51 0.00 4.06
2346 6456 4.669453 CGGTATAGACTAGTGTAGCATGCG 60.669 50.000 13.01 0.00 0.00 4.73
2347 6457 4.215827 GGTATAGACTAGTGTAGCATGCGT 59.784 45.833 13.01 1.38 0.00 5.24
2348 6458 2.568696 AGACTAGTGTAGCATGCGTG 57.431 50.000 13.01 0.09 0.00 5.34
2349 6459 1.819288 AGACTAGTGTAGCATGCGTGT 59.181 47.619 13.01 4.62 0.00 4.49
2350 6460 1.920574 GACTAGTGTAGCATGCGTGTG 59.079 52.381 13.01 2.98 0.00 3.82
2351 6461 1.272490 ACTAGTGTAGCATGCGTGTGT 59.728 47.619 13.01 3.62 0.00 3.72
2352 6462 1.655597 CTAGTGTAGCATGCGTGTGTG 59.344 52.381 13.01 0.00 0.00 3.82
2353 6463 1.154413 GTGTAGCATGCGTGTGTGC 60.154 57.895 13.01 0.00 41.57 4.57
2361 6471 1.431440 TGCGTGTGTGCAGTTTTCC 59.569 52.632 0.00 0.00 40.62 3.13
2362 6472 1.299089 GCGTGTGTGCAGTTTTCCC 60.299 57.895 0.00 0.00 34.15 3.97
2363 6473 1.358759 CGTGTGTGCAGTTTTCCCC 59.641 57.895 0.00 0.00 0.00 4.81
2364 6474 1.101049 CGTGTGTGCAGTTTTCCCCT 61.101 55.000 0.00 0.00 0.00 4.79
2365 6475 0.385390 GTGTGTGCAGTTTTCCCCTG 59.615 55.000 0.00 0.00 0.00 4.45
2366 6476 0.257328 TGTGTGCAGTTTTCCCCTGA 59.743 50.000 0.00 0.00 31.38 3.86
2367 6477 1.341482 TGTGTGCAGTTTTCCCCTGAA 60.341 47.619 0.00 0.00 31.38 3.02
2368 6478 1.338020 GTGTGCAGTTTTCCCCTGAAG 59.662 52.381 0.00 0.00 31.38 3.02
2369 6479 0.315251 GTGCAGTTTTCCCCTGAAGC 59.685 55.000 0.00 0.00 31.38 3.86
2370 6480 0.106268 TGCAGTTTTCCCCTGAAGCA 60.106 50.000 0.00 0.00 31.38 3.91
2371 6481 0.315251 GCAGTTTTCCCCTGAAGCAC 59.685 55.000 0.00 0.00 31.38 4.40
2372 6482 1.691196 CAGTTTTCCCCTGAAGCACA 58.309 50.000 0.00 0.00 31.38 4.57
2373 6483 1.338020 CAGTTTTCCCCTGAAGCACAC 59.662 52.381 0.00 0.00 31.38 3.82
2374 6484 1.064017 AGTTTTCCCCTGAAGCACACA 60.064 47.619 0.00 0.00 0.00 3.72
2375 6485 1.067060 GTTTTCCCCTGAAGCACACAC 59.933 52.381 0.00 0.00 0.00 3.82
2376 6486 0.817634 TTTCCCCTGAAGCACACACG 60.818 55.000 0.00 0.00 0.00 4.49
2377 6487 1.978455 TTCCCCTGAAGCACACACGT 61.978 55.000 0.00 0.00 0.00 4.49
2378 6488 1.525995 CCCCTGAAGCACACACGTT 60.526 57.895 0.00 0.00 0.00 3.99
2379 6489 1.507141 CCCCTGAAGCACACACGTTC 61.507 60.000 0.00 0.00 0.00 3.95
2380 6490 1.507141 CCCTGAAGCACACACGTTCC 61.507 60.000 0.00 0.00 0.00 3.62
2381 6491 0.532862 CCTGAAGCACACACGTTCCT 60.533 55.000 0.00 0.00 0.00 3.36
2382 6492 0.861837 CTGAAGCACACACGTTCCTC 59.138 55.000 0.00 0.00 0.00 3.71
2383 6493 0.531974 TGAAGCACACACGTTCCTCC 60.532 55.000 0.00 0.00 0.00 4.30
2384 6494 0.531974 GAAGCACACACGTTCCTCCA 60.532 55.000 0.00 0.00 0.00 3.86
2385 6495 0.814010 AAGCACACACGTTCCTCCAC 60.814 55.000 0.00 0.00 0.00 4.02
2386 6496 2.251642 GCACACACGTTCCTCCACC 61.252 63.158 0.00 0.00 0.00 4.61
2387 6497 1.445942 CACACACGTTCCTCCACCT 59.554 57.895 0.00 0.00 0.00 4.00
2388 6498 0.600255 CACACACGTTCCTCCACCTC 60.600 60.000 0.00 0.00 0.00 3.85
2389 6499 1.372997 CACACGTTCCTCCACCTCG 60.373 63.158 0.00 0.00 0.00 4.63
2390 6500 1.529948 ACACGTTCCTCCACCTCGA 60.530 57.895 0.00 0.00 0.00 4.04
2391 6501 0.898789 ACACGTTCCTCCACCTCGAT 60.899 55.000 0.00 0.00 0.00 3.59
2392 6502 0.179134 CACGTTCCTCCACCTCGATC 60.179 60.000 0.00 0.00 0.00 3.69
2393 6503 0.611062 ACGTTCCTCCACCTCGATCA 60.611 55.000 0.00 0.00 0.00 2.92
2394 6504 0.747255 CGTTCCTCCACCTCGATCAT 59.253 55.000 0.00 0.00 0.00 2.45
2395 6505 1.536922 CGTTCCTCCACCTCGATCATG 60.537 57.143 0.00 0.00 0.00 3.07
2396 6506 1.123077 TTCCTCCACCTCGATCATGG 58.877 55.000 3.85 3.85 34.58 3.66
2397 6507 1.070445 CCTCCACCTCGATCATGGC 59.930 63.158 5.14 0.00 33.20 4.40
2398 6508 1.070445 CTCCACCTCGATCATGGCC 59.930 63.158 0.00 0.00 33.20 5.36
2399 6509 1.383109 TCCACCTCGATCATGGCCT 60.383 57.895 3.32 0.00 33.20 5.19
2400 6510 1.070445 CCACCTCGATCATGGCCTC 59.930 63.158 3.32 0.00 0.00 4.70
2401 6511 1.070445 CACCTCGATCATGGCCTCC 59.930 63.158 3.32 0.00 0.00 4.30
2402 6512 2.143419 ACCTCGATCATGGCCTCCC 61.143 63.158 3.32 0.00 0.00 4.30
2404 6514 1.070445 CTCGATCATGGCCTCCCAC 59.930 63.158 3.32 0.00 45.77 4.61
2405 6515 2.280389 CGATCATGGCCTCCCACG 60.280 66.667 3.32 0.67 45.77 4.94
2406 6516 2.796193 CGATCATGGCCTCCCACGA 61.796 63.158 3.32 0.00 45.77 4.35
2407 6517 1.757306 GATCATGGCCTCCCACGAT 59.243 57.895 3.32 0.00 46.09 3.73
2408 6518 1.757306 ATCATGGCCTCCCACGATC 59.243 57.895 3.32 0.00 39.76 3.69
2409 6519 1.056125 ATCATGGCCTCCCACGATCA 61.056 55.000 3.32 0.00 39.76 2.92
2410 6520 1.524621 CATGGCCTCCCACGATCAC 60.525 63.158 3.32 0.00 45.77 3.06
2411 6521 2.746375 ATGGCCTCCCACGATCACC 61.746 63.158 3.32 0.00 45.77 4.02
2412 6522 3.399181 GGCCTCCCACGATCACCA 61.399 66.667 0.00 0.00 0.00 4.17
2413 6523 2.746375 GGCCTCCCACGATCACCAT 61.746 63.158 0.00 0.00 0.00 3.55
2414 6524 1.227674 GCCTCCCACGATCACCATC 60.228 63.158 0.00 0.00 0.00 3.51
2421 6531 2.588877 CGATCACCATCGTGGCCC 60.589 66.667 0.00 0.00 45.90 5.80
2422 6532 2.589540 GATCACCATCGTGGCCCA 59.410 61.111 0.00 0.00 42.67 5.36
2423 6533 1.524621 GATCACCATCGTGGCCCAG 60.525 63.158 0.00 0.00 42.67 4.45
2424 6534 1.971505 GATCACCATCGTGGCCCAGA 61.972 60.000 0.00 0.00 42.67 3.86
2425 6535 2.257409 ATCACCATCGTGGCCCAGAC 62.257 60.000 0.00 0.00 42.67 3.51
2426 6536 4.082523 ACCATCGTGGCCCAGACG 62.083 66.667 7.75 7.75 42.67 4.18
2439 6549 4.461119 AGACGCCCTCTGATCCAA 57.539 55.556 0.00 0.00 0.00 3.53
2440 6550 1.901085 AGACGCCCTCTGATCCAAC 59.099 57.895 0.00 0.00 0.00 3.77
2441 6551 0.616111 AGACGCCCTCTGATCCAACT 60.616 55.000 0.00 0.00 0.00 3.16
2442 6552 0.460987 GACGCCCTCTGATCCAACTG 60.461 60.000 0.00 0.00 0.00 3.16
2443 6553 1.194781 ACGCCCTCTGATCCAACTGT 61.195 55.000 0.00 0.00 0.00 3.55
2444 6554 0.824109 CGCCCTCTGATCCAACTGTA 59.176 55.000 0.00 0.00 0.00 2.74
2445 6555 1.414181 CGCCCTCTGATCCAACTGTAT 59.586 52.381 0.00 0.00 0.00 2.29
2446 6556 2.628178 CGCCCTCTGATCCAACTGTATA 59.372 50.000 0.00 0.00 0.00 1.47
2447 6557 3.259374 CGCCCTCTGATCCAACTGTATAT 59.741 47.826 0.00 0.00 0.00 0.86
2448 6558 4.573900 GCCCTCTGATCCAACTGTATATG 58.426 47.826 0.00 0.00 0.00 1.78
2449 6559 4.040952 GCCCTCTGATCCAACTGTATATGT 59.959 45.833 0.00 0.00 0.00 2.29
2450 6560 5.246203 GCCCTCTGATCCAACTGTATATGTA 59.754 44.000 0.00 0.00 0.00 2.29
2451 6561 6.692486 CCCTCTGATCCAACTGTATATGTAC 58.308 44.000 0.00 0.00 0.00 2.90
2452 6562 6.295349 CCCTCTGATCCAACTGTATATGTACC 60.295 46.154 0.00 0.00 0.00 3.34
2453 6563 6.295349 CCTCTGATCCAACTGTATATGTACCC 60.295 46.154 0.00 0.00 0.00 3.69
2454 6564 5.542635 TCTGATCCAACTGTATATGTACCCC 59.457 44.000 0.00 0.00 0.00 4.95
2455 6565 4.595781 TGATCCAACTGTATATGTACCCCC 59.404 45.833 0.00 0.00 0.00 5.40
2471 6581 2.148446 CCCCCAGATCAATGCAAAGA 57.852 50.000 0.00 0.00 0.00 2.52
2472 6582 2.029623 CCCCCAGATCAATGCAAAGAG 58.970 52.381 0.00 0.00 0.00 2.85
2473 6583 1.407979 CCCCAGATCAATGCAAAGAGC 59.592 52.381 0.00 0.00 45.96 4.09
2488 6598 3.243855 GAGCGTGTTCGATCTCTCC 57.756 57.895 0.00 0.00 46.88 3.71
2489 6599 0.452184 GAGCGTGTTCGATCTCTCCA 59.548 55.000 0.00 0.00 46.88 3.86
2490 6600 0.171455 AGCGTGTTCGATCTCTCCAC 59.829 55.000 0.00 0.00 39.71 4.02
2491 6601 0.171455 GCGTGTTCGATCTCTCCACT 59.829 55.000 0.00 0.00 39.71 4.00
2492 6602 1.901538 CGTGTTCGATCTCTCCACTG 58.098 55.000 0.00 0.00 39.71 3.66
2493 6603 1.468914 CGTGTTCGATCTCTCCACTGA 59.531 52.381 0.00 0.00 39.71 3.41
2494 6604 2.095212 CGTGTTCGATCTCTCCACTGAA 60.095 50.000 0.00 0.00 39.71 3.02
2495 6605 3.611766 CGTGTTCGATCTCTCCACTGAAA 60.612 47.826 0.00 0.00 39.71 2.69
2496 6606 3.675698 GTGTTCGATCTCTCCACTGAAAC 59.324 47.826 0.00 0.00 0.00 2.78
2497 6607 3.320826 TGTTCGATCTCTCCACTGAAACA 59.679 43.478 0.00 0.00 0.00 2.83
2498 6608 3.857549 TCGATCTCTCCACTGAAACAG 57.142 47.619 0.00 0.00 37.52 3.16
2499 6609 3.157881 TCGATCTCTCCACTGAAACAGT 58.842 45.455 0.00 0.00 46.51 3.55
2512 6622 6.851222 ACTGAAACAGTGATCTTGTACTTG 57.149 37.500 0.00 0.00 43.63 3.16
2516 6626 6.821160 TGAAACAGTGATCTTGTACTTGTGAA 59.179 34.615 0.00 0.00 0.00 3.18
2526 6636 4.415881 TGTACTTGTGAATGTGTCCTGT 57.584 40.909 0.00 0.00 0.00 4.00
2532 6642 1.745489 GAATGTGTCCTGTCCGGCC 60.745 63.158 0.00 0.00 0.00 6.13
2533 6643 2.463589 GAATGTGTCCTGTCCGGCCA 62.464 60.000 2.24 0.00 0.00 5.36
2538 6648 0.893270 TGTCCTGTCCGGCCATTTTG 60.893 55.000 2.24 0.00 0.00 2.44
2542 6652 3.284336 GTCCGGCCATTTTGGGAC 58.716 61.111 9.17 9.17 41.84 4.46
2549 6659 2.745968 GGCCATTTTGGGACCTGAATA 58.254 47.619 0.00 0.00 38.19 1.75
2550 6660 3.308401 GGCCATTTTGGGACCTGAATAT 58.692 45.455 0.00 0.00 38.19 1.28
2551 6661 3.321968 GGCCATTTTGGGACCTGAATATC 59.678 47.826 0.00 0.00 38.19 1.63
2552 6662 3.960102 GCCATTTTGGGACCTGAATATCA 59.040 43.478 0.00 0.00 38.19 2.15
2554 6664 5.104982 GCCATTTTGGGACCTGAATATCAAA 60.105 40.000 0.00 0.00 38.19 2.69
2555 6665 6.576045 GCCATTTTGGGACCTGAATATCAAAA 60.576 38.462 0.00 0.00 38.19 2.44
2557 6667 8.048514 CCATTTTGGGACCTGAATATCAAAATT 58.951 33.333 10.74 0.00 40.54 1.82
2560 6670 5.588845 TGGGACCTGAATATCAAAATTGGT 58.411 37.500 0.00 0.00 0.00 3.67
2561 6671 6.736581 TGGGACCTGAATATCAAAATTGGTA 58.263 36.000 0.00 0.00 0.00 3.25
2562 6672 6.605594 TGGGACCTGAATATCAAAATTGGTAC 59.394 38.462 0.00 0.00 0.00 3.34
2563 6673 6.833933 GGGACCTGAATATCAAAATTGGTACT 59.166 38.462 0.00 0.00 0.00 2.73
2564 6674 7.201821 GGGACCTGAATATCAAAATTGGTACTG 60.202 40.741 0.00 0.00 0.00 2.74
2565 6675 7.201821 GGACCTGAATATCAAAATTGGTACTGG 60.202 40.741 0.00 0.00 0.00 4.00
2566 6676 6.096846 ACCTGAATATCAAAATTGGTACTGGC 59.903 38.462 0.00 0.00 0.00 4.85
2567 6677 6.322201 CCTGAATATCAAAATTGGTACTGGCT 59.678 38.462 0.00 0.00 0.00 4.75
2568 6678 7.099266 TGAATATCAAAATTGGTACTGGCTG 57.901 36.000 0.00 0.00 0.00 4.85
2569 6679 6.663093 TGAATATCAAAATTGGTACTGGCTGT 59.337 34.615 1.74 1.74 0.00 4.40
2570 6680 4.789012 ATCAAAATTGGTACTGGCTGTG 57.211 40.909 7.34 0.00 0.00 3.66
2571 6681 3.826524 TCAAAATTGGTACTGGCTGTGA 58.173 40.909 7.34 0.00 0.00 3.58
2574 6684 4.307032 AAATTGGTACTGGCTGTGATCT 57.693 40.909 7.34 0.00 0.00 2.75
2577 6687 2.540383 TGGTACTGGCTGTGATCTCTT 58.460 47.619 7.34 0.00 0.00 2.85
2594 6704 6.540189 TGATCTCTTTCCTAACTTAAGCATGC 59.460 38.462 10.51 10.51 0.00 4.06
2595 6705 4.870426 TCTCTTTCCTAACTTAAGCATGCG 59.130 41.667 13.01 0.00 0.00 4.73
2639 6749 2.048603 GGGCATGACAGGGCAAGAC 61.049 63.158 15.89 0.00 0.00 3.01
2640 6750 1.303561 GGCATGACAGGGCAAGACA 60.304 57.895 8.98 0.00 0.00 3.41
2641 6751 0.895100 GGCATGACAGGGCAAGACAA 60.895 55.000 8.98 0.00 0.00 3.18
2642 6752 0.961019 GCATGACAGGGCAAGACAAA 59.039 50.000 0.00 0.00 0.00 2.83
2643 6753 1.340889 GCATGACAGGGCAAGACAAAA 59.659 47.619 0.00 0.00 0.00 2.44
2644 6754 2.028748 GCATGACAGGGCAAGACAAAAT 60.029 45.455 0.00 0.00 0.00 1.82
2645 6755 3.841643 CATGACAGGGCAAGACAAAATC 58.158 45.455 0.00 0.00 0.00 2.17
2646 6756 2.238521 TGACAGGGCAAGACAAAATCC 58.761 47.619 0.00 0.00 0.00 3.01
2647 6757 1.546029 GACAGGGCAAGACAAAATCCC 59.454 52.381 0.00 0.00 37.24 3.85
2648 6758 1.133199 ACAGGGCAAGACAAAATCCCA 60.133 47.619 0.00 0.00 39.42 4.37
2649 6759 1.969923 CAGGGCAAGACAAAATCCCAA 59.030 47.619 0.00 0.00 39.42 4.12
2650 6760 2.568509 CAGGGCAAGACAAAATCCCAAT 59.431 45.455 0.00 0.00 39.42 3.16
2651 6761 3.008266 CAGGGCAAGACAAAATCCCAATT 59.992 43.478 0.00 0.00 39.42 2.32
2652 6762 4.222588 CAGGGCAAGACAAAATCCCAATTA 59.777 41.667 0.00 0.00 39.42 1.40
2653 6763 4.222810 AGGGCAAGACAAAATCCCAATTAC 59.777 41.667 0.00 0.00 39.42 1.89
2654 6764 4.222810 GGGCAAGACAAAATCCCAATTACT 59.777 41.667 0.00 0.00 36.96 2.24
2655 6765 5.420739 GGGCAAGACAAAATCCCAATTACTA 59.579 40.000 0.00 0.00 36.96 1.82
2656 6766 6.405842 GGGCAAGACAAAATCCCAATTACTAG 60.406 42.308 0.00 0.00 36.96 2.57
2657 6767 6.377146 GGCAAGACAAAATCCCAATTACTAGA 59.623 38.462 0.00 0.00 0.00 2.43
2658 6768 7.093945 GGCAAGACAAAATCCCAATTACTAGAA 60.094 37.037 0.00 0.00 0.00 2.10
2659 6769 8.303876 GCAAGACAAAATCCCAATTACTAGAAA 58.696 33.333 0.00 0.00 0.00 2.52
2660 6770 9.846248 CAAGACAAAATCCCAATTACTAGAAAG 57.154 33.333 0.00 0.00 0.00 2.62
2661 6771 9.807921 AAGACAAAATCCCAATTACTAGAAAGA 57.192 29.630 0.00 0.00 0.00 2.52
2662 6772 9.807921 AGACAAAATCCCAATTACTAGAAAGAA 57.192 29.630 0.00 0.00 0.00 2.52
2670 6780 9.747898 TCCCAATTACTAGAAAGAAAATTAGCA 57.252 29.630 0.00 0.00 0.00 3.49
2681 6791 9.199982 AGAAAGAAAATTAGCATTGTGATGTTG 57.800 29.630 0.00 0.00 35.63 3.33
2682 6792 9.195411 GAAAGAAAATTAGCATTGTGATGTTGA 57.805 29.630 0.00 0.00 35.63 3.18
2683 6793 9.545105 AAAGAAAATTAGCATTGTGATGTTGAA 57.455 25.926 0.00 0.00 35.63 2.69
2684 6794 8.524870 AGAAAATTAGCATTGTGATGTTGAAC 57.475 30.769 0.00 0.00 35.63 3.18
2685 6795 7.599998 AGAAAATTAGCATTGTGATGTTGAACC 59.400 33.333 0.00 0.00 35.63 3.62
2686 6796 2.995466 AGCATTGTGATGTTGAACCG 57.005 45.000 0.00 0.00 35.63 4.44
2687 6797 2.503331 AGCATTGTGATGTTGAACCGA 58.497 42.857 0.00 0.00 35.63 4.69
2688 6798 2.884012 AGCATTGTGATGTTGAACCGAA 59.116 40.909 0.00 0.00 35.63 4.30
2689 6799 3.507233 AGCATTGTGATGTTGAACCGAAT 59.493 39.130 0.00 0.00 35.63 3.34
2690 6800 3.609373 GCATTGTGATGTTGAACCGAATG 59.391 43.478 0.00 0.00 35.63 2.67
2691 6801 4.797471 CATTGTGATGTTGAACCGAATGT 58.203 39.130 0.00 0.00 0.00 2.71
2692 6802 4.909696 TTGTGATGTTGAACCGAATGTT 57.090 36.364 0.00 0.00 40.81 2.71
2693 6803 4.221926 TGTGATGTTGAACCGAATGTTG 57.778 40.909 0.00 0.00 37.29 3.33
2694 6804 3.629855 TGTGATGTTGAACCGAATGTTGT 59.370 39.130 0.00 0.00 37.29 3.32
2695 6805 4.219033 GTGATGTTGAACCGAATGTTGTC 58.781 43.478 0.00 0.00 37.29 3.18
2696 6806 3.059257 TGATGTTGAACCGAATGTTGTCG 60.059 43.478 0.00 0.00 37.29 4.35
2697 6807 1.003331 TGTTGAACCGAATGTTGTCGC 60.003 47.619 0.00 0.00 39.74 5.19
2698 6808 1.263217 GTTGAACCGAATGTTGTCGCT 59.737 47.619 0.00 0.00 39.74 4.93
2699 6809 1.144969 TGAACCGAATGTTGTCGCTC 58.855 50.000 0.00 0.00 39.74 5.03
2700 6810 1.270094 TGAACCGAATGTTGTCGCTCT 60.270 47.619 0.00 0.00 39.74 4.09
2701 6811 1.798813 GAACCGAATGTTGTCGCTCTT 59.201 47.619 0.00 0.00 39.74 2.85
2702 6812 2.736144 ACCGAATGTTGTCGCTCTTA 57.264 45.000 0.00 0.00 39.74 2.10
2703 6813 3.247006 ACCGAATGTTGTCGCTCTTAT 57.753 42.857 0.00 0.00 39.74 1.73
2704 6814 3.187700 ACCGAATGTTGTCGCTCTTATC 58.812 45.455 0.00 0.00 39.74 1.75
2705 6815 3.186909 CCGAATGTTGTCGCTCTTATCA 58.813 45.455 0.00 0.00 39.74 2.15
2706 6816 3.616821 CCGAATGTTGTCGCTCTTATCAA 59.383 43.478 0.00 0.00 39.74 2.57
2707 6817 4.492570 CCGAATGTTGTCGCTCTTATCAAC 60.493 45.833 0.00 0.00 39.74 3.18
2708 6818 4.492570 CGAATGTTGTCGCTCTTATCAACC 60.493 45.833 0.00 0.00 39.22 3.77
2709 6819 3.394674 TGTTGTCGCTCTTATCAACCA 57.605 42.857 0.00 0.00 39.22 3.67
2710 6820 3.937814 TGTTGTCGCTCTTATCAACCAT 58.062 40.909 0.00 0.00 39.22 3.55
2711 6821 4.323417 TGTTGTCGCTCTTATCAACCATT 58.677 39.130 0.00 0.00 39.22 3.16
2712 6822 4.759693 TGTTGTCGCTCTTATCAACCATTT 59.240 37.500 0.00 0.00 39.22 2.32
2713 6823 5.240623 TGTTGTCGCTCTTATCAACCATTTT 59.759 36.000 0.00 0.00 39.22 1.82
2714 6824 5.295431 TGTCGCTCTTATCAACCATTTTG 57.705 39.130 0.00 0.00 0.00 2.44
2715 6825 4.155826 TGTCGCTCTTATCAACCATTTTGG 59.844 41.667 0.00 0.00 45.02 3.28
2716 6826 3.694072 TCGCTCTTATCAACCATTTTGGG 59.306 43.478 0.00 0.00 43.37 4.12
2717 6827 3.694072 CGCTCTTATCAACCATTTTGGGA 59.306 43.478 0.00 0.00 43.37 4.37
2718 6828 4.339247 CGCTCTTATCAACCATTTTGGGAT 59.661 41.667 0.00 0.00 43.37 3.85
2719 6829 5.506317 CGCTCTTATCAACCATTTTGGGATC 60.506 44.000 0.00 0.00 43.37 3.36
2720 6830 5.595952 GCTCTTATCAACCATTTTGGGATCT 59.404 40.000 0.00 0.00 43.37 2.75
2721 6831 6.460676 GCTCTTATCAACCATTTTGGGATCTG 60.461 42.308 0.00 0.00 43.37 2.90
2722 6832 6.730447 TCTTATCAACCATTTTGGGATCTGA 58.270 36.000 0.00 0.00 43.37 3.27
2723 6833 7.356680 TCTTATCAACCATTTTGGGATCTGAT 58.643 34.615 0.00 0.00 43.37 2.90
2724 6834 5.864418 ATCAACCATTTTGGGATCTGATG 57.136 39.130 0.00 0.00 43.37 3.07
2725 6835 4.676109 TCAACCATTTTGGGATCTGATGT 58.324 39.130 0.00 0.00 43.37 3.06
2726 6836 5.085920 TCAACCATTTTGGGATCTGATGTT 58.914 37.500 0.00 0.00 43.37 2.71
2727 6837 5.185635 TCAACCATTTTGGGATCTGATGTTC 59.814 40.000 0.00 0.00 43.37 3.18
2728 6838 4.676109 ACCATTTTGGGATCTGATGTTCA 58.324 39.130 0.00 0.00 43.37 3.18
2729 6839 4.708421 ACCATTTTGGGATCTGATGTTCAG 59.292 41.667 0.00 0.00 43.18 3.02
2730 6840 4.951715 CCATTTTGGGATCTGATGTTCAGA 59.048 41.667 9.47 9.47 44.83 3.27
2731 6841 5.067413 CCATTTTGGGATCTGATGTTCAGAG 59.933 44.000 12.33 0.00 44.37 3.35
2732 6842 7.082287 CCATTTTGGGATCTGATGTTCAGAGA 61.082 42.308 12.33 0.00 44.37 3.10
2733 6843 8.809832 CCATTTTGGGATCTGATGTTCAGAGAG 61.810 44.444 12.33 0.00 44.37 3.20
2742 6852 5.407407 TGATGTTCAGAGAGGGAACTAAC 57.593 43.478 6.80 0.00 44.43 2.34
2743 6853 5.087323 TGATGTTCAGAGAGGGAACTAACT 58.913 41.667 6.80 0.00 44.43 2.24
2744 6854 5.544176 TGATGTTCAGAGAGGGAACTAACTT 59.456 40.000 6.80 0.00 44.43 2.66
2745 6855 5.215252 TGTTCAGAGAGGGAACTAACTTG 57.785 43.478 6.80 0.00 44.43 3.16
2746 6856 4.040461 TGTTCAGAGAGGGAACTAACTTGG 59.960 45.833 6.80 0.00 44.43 3.61
2747 6857 4.127918 TCAGAGAGGGAACTAACTTGGA 57.872 45.455 0.00 0.00 44.43 3.53
2748 6858 4.489737 TCAGAGAGGGAACTAACTTGGAA 58.510 43.478 0.00 0.00 44.43 3.53
2749 6859 4.283722 TCAGAGAGGGAACTAACTTGGAAC 59.716 45.833 0.00 0.00 44.43 3.62
2750 6860 4.284746 CAGAGAGGGAACTAACTTGGAACT 59.715 45.833 0.00 0.00 44.43 3.01
2751 6861 4.284746 AGAGAGGGAACTAACTTGGAACTG 59.715 45.833 0.00 0.00 44.43 3.16
2752 6862 3.328050 AGAGGGAACTAACTTGGAACTGG 59.672 47.826 0.00 0.00 44.43 4.00
2753 6863 2.160205 GGGAACTAACTTGGAACTGGC 58.840 52.381 0.00 0.00 0.00 4.85
2754 6864 2.224793 GGGAACTAACTTGGAACTGGCT 60.225 50.000 0.00 0.00 0.00 4.75
2755 6865 2.814336 GGAACTAACTTGGAACTGGCTG 59.186 50.000 0.00 0.00 0.00 4.85
2756 6866 3.477530 GAACTAACTTGGAACTGGCTGT 58.522 45.455 0.00 0.00 0.00 4.40
2757 6867 2.851195 ACTAACTTGGAACTGGCTGTG 58.149 47.619 0.00 0.00 0.00 3.66
2758 6868 2.438021 ACTAACTTGGAACTGGCTGTGA 59.562 45.455 0.00 0.00 0.00 3.58
2759 6869 2.664402 AACTTGGAACTGGCTGTGAT 57.336 45.000 0.00 0.00 0.00 3.06
2760 6870 1.901591 ACTTGGAACTGGCTGTGATG 58.098 50.000 0.00 0.00 0.00 3.07
2761 6871 1.143684 ACTTGGAACTGGCTGTGATGT 59.856 47.619 0.00 0.00 0.00 3.06
2762 6872 2.371841 ACTTGGAACTGGCTGTGATGTA 59.628 45.455 0.00 0.00 0.00 2.29
2763 6873 3.181445 ACTTGGAACTGGCTGTGATGTAA 60.181 43.478 0.00 0.00 0.00 2.41
2764 6874 3.719268 TGGAACTGGCTGTGATGTAAT 57.281 42.857 0.00 0.00 0.00 1.89
2765 6875 3.609853 TGGAACTGGCTGTGATGTAATC 58.390 45.455 0.00 0.00 45.83 1.75
2766 6876 3.264193 TGGAACTGGCTGTGATGTAATCT 59.736 43.478 0.00 0.00 45.81 2.40
2767 6877 3.624861 GGAACTGGCTGTGATGTAATCTG 59.375 47.826 0.00 0.00 45.81 2.90
2768 6878 3.988976 ACTGGCTGTGATGTAATCTGT 57.011 42.857 0.00 0.00 45.81 3.41
2769 6879 3.603532 ACTGGCTGTGATGTAATCTGTG 58.396 45.455 0.00 0.00 45.81 3.66
2770 6880 3.261643 ACTGGCTGTGATGTAATCTGTGA 59.738 43.478 0.00 0.00 45.81 3.58
2771 6881 4.080695 ACTGGCTGTGATGTAATCTGTGAT 60.081 41.667 0.00 0.00 45.81 3.06
2772 6882 4.445453 TGGCTGTGATGTAATCTGTGATC 58.555 43.478 0.00 0.00 45.81 2.92
2773 6883 4.162888 TGGCTGTGATGTAATCTGTGATCT 59.837 41.667 0.00 0.00 45.81 2.75
2774 6884 4.510711 GGCTGTGATGTAATCTGTGATCTG 59.489 45.833 0.00 0.00 45.81 2.90
2775 6885 5.354767 GCTGTGATGTAATCTGTGATCTGA 58.645 41.667 0.00 0.00 45.81 3.27
2776 6886 5.990386 GCTGTGATGTAATCTGTGATCTGAT 59.010 40.000 0.00 0.00 45.81 2.90
2777 6887 6.073711 GCTGTGATGTAATCTGTGATCTGATG 60.074 42.308 0.00 0.00 45.81 3.07
2778 6888 6.881570 TGTGATGTAATCTGTGATCTGATGT 58.118 36.000 0.00 0.00 45.81 3.06
2779 6889 8.010733 TGTGATGTAATCTGTGATCTGATGTA 57.989 34.615 0.00 0.00 45.81 2.29
2780 6890 7.922811 TGTGATGTAATCTGTGATCTGATGTAC 59.077 37.037 0.00 0.00 45.81 2.90
2781 6891 7.922811 GTGATGTAATCTGTGATCTGATGTACA 59.077 37.037 0.00 0.00 45.81 2.90
2782 6892 8.477256 TGATGTAATCTGTGATCTGATGTACAA 58.523 33.333 0.00 0.00 45.81 2.41
2783 6893 8.654230 ATGTAATCTGTGATCTGATGTACAAC 57.346 34.615 0.00 0.00 34.25 3.32
2784 6894 7.840931 TGTAATCTGTGATCTGATGTACAACT 58.159 34.615 0.00 0.00 33.61 3.16
2785 6895 8.966868 TGTAATCTGTGATCTGATGTACAACTA 58.033 33.333 0.00 0.00 33.61 2.24
2786 6896 9.803315 GTAATCTGTGATCTGATGTACAACTAA 57.197 33.333 0.00 0.00 33.61 2.24
2787 6897 8.709386 AATCTGTGATCTGATGTACAACTAAC 57.291 34.615 0.00 0.00 33.61 2.34
2788 6898 7.468141 TCTGTGATCTGATGTACAACTAACT 57.532 36.000 0.00 0.00 0.00 2.24
2789 6899 7.315890 TCTGTGATCTGATGTACAACTAACTG 58.684 38.462 0.00 0.00 0.00 3.16
2790 6900 6.993079 TGTGATCTGATGTACAACTAACTGT 58.007 36.000 0.00 0.00 0.00 3.55
2791 6901 8.117813 TGTGATCTGATGTACAACTAACTGTA 57.882 34.615 0.00 0.00 0.00 2.74
2803 6913 5.869888 ACAACTAACTGTACATCTTAGCTGC 59.130 40.000 16.53 0.00 0.00 5.25
2804 6914 5.661056 ACTAACTGTACATCTTAGCTGCA 57.339 39.130 15.59 0.00 0.00 4.41
2805 6915 5.655488 ACTAACTGTACATCTTAGCTGCAG 58.345 41.667 10.11 10.11 0.00 4.41
2806 6916 2.898705 ACTGTACATCTTAGCTGCAGC 58.101 47.619 31.53 31.53 42.49 5.25
2816 6926 2.796651 GCTGCAGCTCCCATTTCG 59.203 61.111 31.33 0.00 38.21 3.46
2817 6927 2.768492 GCTGCAGCTCCCATTTCGG 61.768 63.158 31.33 0.00 38.21 4.30
2826 6936 3.924507 CCATTTCGGGCAGGGAAG 58.075 61.111 0.00 0.00 0.00 3.46
2827 6937 1.754234 CCATTTCGGGCAGGGAAGG 60.754 63.158 0.00 0.00 0.00 3.46
2828 6938 1.302949 CATTTCGGGCAGGGAAGGA 59.697 57.895 0.00 0.00 0.00 3.36
2829 6939 0.749454 CATTTCGGGCAGGGAAGGAG 60.749 60.000 0.00 0.00 0.00 3.69
2830 6940 0.914417 ATTTCGGGCAGGGAAGGAGA 60.914 55.000 0.00 0.00 0.00 3.71
2831 6941 1.131303 TTTCGGGCAGGGAAGGAGAA 61.131 55.000 0.00 0.00 0.00 2.87
2832 6942 1.131303 TTCGGGCAGGGAAGGAGAAA 61.131 55.000 0.00 0.00 0.00 2.52
2833 6943 1.078143 CGGGCAGGGAAGGAGAAAG 60.078 63.158 0.00 0.00 0.00 2.62
2834 6944 1.842381 CGGGCAGGGAAGGAGAAAGT 61.842 60.000 0.00 0.00 0.00 2.66
2835 6945 0.034960 GGGCAGGGAAGGAGAAAGTC 60.035 60.000 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.265995 TCTTAGGGATGGGTTTTGAGACC 59.734 47.826 0.00 0.00 39.04 3.85
8 9 4.662278 TCTTGTCTTAGGGATGGGTTTTG 58.338 43.478 0.00 0.00 0.00 2.44
20 21 1.464189 GGCGCGCTTTTCTTGTCTTAG 60.464 52.381 32.29 0.00 0.00 2.18
35 37 2.323939 TACTTTGTTTTCATGGCGCG 57.676 45.000 0.00 0.00 0.00 6.86
36 38 5.396750 TTTTTACTTTGTTTTCATGGCGC 57.603 34.783 0.00 0.00 0.00 6.53
60 62 1.599419 GGCGCGTGAGAAACAAATGTT 60.599 47.619 8.43 0.00 40.50 2.71
71 73 0.179111 TAATTGAGGAGGCGCGTGAG 60.179 55.000 7.63 0.00 0.00 3.51
75 77 0.373716 GTGTTAATTGAGGAGGCGCG 59.626 55.000 0.00 0.00 0.00 6.86
80 82 1.659098 GACCGCGTGTTAATTGAGGAG 59.341 52.381 4.92 0.00 0.00 3.69
81 83 1.274167 AGACCGCGTGTTAATTGAGGA 59.726 47.619 4.92 0.00 0.00 3.71
92 94 0.456221 ATGGAGTTAGAGACCGCGTG 59.544 55.000 4.92 0.00 0.00 5.34
94 96 4.761235 TTATATGGAGTTAGAGACCGCG 57.239 45.455 0.00 0.00 0.00 6.46
105 118 8.749354 GGAACCAAAACTCATTTTATATGGAGT 58.251 33.333 0.00 0.00 42.08 3.85
141 154 8.099364 ACGAAGTGTTTTCAGATGAATATTGT 57.901 30.769 0.00 0.00 42.51 2.71
188 201 8.715191 TTAATTTGCGCATTAAGGATCATTTT 57.285 26.923 12.75 0.00 0.00 1.82
235 4204 8.488651 AAGTTCCGACGATAGATATTTTTGTT 57.511 30.769 0.00 0.00 41.38 2.83
261 4231 4.938575 TCTTTGGGCCTTTCTTGGTATA 57.061 40.909 4.53 0.00 0.00 1.47
265 4235 5.422145 CAATATTCTTTGGGCCTTTCTTGG 58.578 41.667 4.53 0.00 0.00 3.61
301 4275 4.039730 TGGATAGATTCTGCCTAGCTTGTC 59.960 45.833 0.00 0.00 0.00 3.18
311 4288 3.777106 TGGATGGTGGATAGATTCTGC 57.223 47.619 0.00 0.00 0.00 4.26
329 4306 2.660189 AATTCCTTTCTTGCGCATGG 57.340 45.000 21.59 13.21 0.00 3.66
330 4307 2.669434 CCAAATTCCTTTCTTGCGCATG 59.331 45.455 12.75 15.07 0.00 4.06
331 4308 2.562298 TCCAAATTCCTTTCTTGCGCAT 59.438 40.909 12.75 0.00 0.00 4.73
332 4309 1.959985 TCCAAATTCCTTTCTTGCGCA 59.040 42.857 5.66 5.66 0.00 6.09
333 4310 2.723124 TCCAAATTCCTTTCTTGCGC 57.277 45.000 0.00 0.00 0.00 6.09
366 4344 6.347644 GCAATAAAAAGTGATTTCCCTTGTGC 60.348 38.462 0.00 0.00 0.00 4.57
367 4345 6.930722 AGCAATAAAAAGTGATTTCCCTTGTG 59.069 34.615 0.00 0.00 0.00 3.33
368 4346 6.930722 CAGCAATAAAAAGTGATTTCCCTTGT 59.069 34.615 0.00 0.00 0.00 3.16
369 4347 6.369615 CCAGCAATAAAAAGTGATTTCCCTTG 59.630 38.462 0.00 0.00 0.00 3.61
413 4422 1.464734 GGGGAGACTTTTGCTTAGCC 58.535 55.000 0.29 0.00 0.00 3.93
435 4446 2.549134 GGCGGCCCATTTTTAGTTTTGT 60.549 45.455 8.12 0.00 0.00 2.83
477 4488 2.478335 GATTCCGTTGGTGGCCTGGA 62.478 60.000 3.32 0.00 0.00 3.86
482 4493 2.406616 ATGCGATTCCGTTGGTGGC 61.407 57.895 0.00 0.00 38.24 5.01
501 4512 2.095252 GCCCACGTCGCTTTCTCTC 61.095 63.158 0.00 0.00 0.00 3.20
532 4543 3.893763 CCTCGAGATCCGTGCGCT 61.894 66.667 15.71 0.00 39.75 5.92
618 4641 3.124921 CGCTTTTCCCATCGCGGT 61.125 61.111 6.13 0.00 41.72 5.68
698 4722 1.548719 GGGGGATAATTTAATGGCCGC 59.451 52.381 0.00 0.00 0.00 6.53
792 4821 4.675303 TGGGTGGAGGGTGGAGGG 62.675 72.222 0.00 0.00 0.00 4.30
793 4822 3.330720 GTGGGTGGAGGGTGGAGG 61.331 72.222 0.00 0.00 0.00 4.30
794 4823 3.330720 GGTGGGTGGAGGGTGGAG 61.331 72.222 0.00 0.00 0.00 3.86
795 4824 4.995058 GGGTGGGTGGAGGGTGGA 62.995 72.222 0.00 0.00 0.00 4.02
797 4826 3.966543 GTGGGTGGGTGGAGGGTG 61.967 72.222 0.00 0.00 0.00 4.61
883 4913 1.209275 CGACGAATCACCCGATCAGC 61.209 60.000 0.00 0.00 0.00 4.26
904 4937 0.179051 CTCTCAGCTCCAATCCAGCC 60.179 60.000 0.00 0.00 37.63 4.85
905 4938 0.179051 CCTCTCAGCTCCAATCCAGC 60.179 60.000 0.00 0.00 37.12 4.85
906 4939 1.202330 ACCTCTCAGCTCCAATCCAG 58.798 55.000 0.00 0.00 0.00 3.86
907 4940 1.556911 GAACCTCTCAGCTCCAATCCA 59.443 52.381 0.00 0.00 0.00 3.41
908 4941 1.472376 CGAACCTCTCAGCTCCAATCC 60.472 57.143 0.00 0.00 0.00 3.01
909 4942 1.472376 CCGAACCTCTCAGCTCCAATC 60.472 57.143 0.00 0.00 0.00 2.67
915 4948 2.654079 CCAGCCGAACCTCTCAGCT 61.654 63.158 0.00 0.00 0.00 4.24
949 4982 1.969923 CCAACCCAATCAAGAAGCCAA 59.030 47.619 0.00 0.00 0.00 4.52
953 4986 2.603075 TCCCCAACCCAATCAAGAAG 57.397 50.000 0.00 0.00 0.00 2.85
1044 5077 3.706373 CCGCCATATCCTCCCCCG 61.706 72.222 0.00 0.00 0.00 5.73
1047 5080 1.885163 CGTACCCGCCATATCCTCCC 61.885 65.000 0.00 0.00 0.00 4.30
1050 5083 1.521450 CGTCGTACCCGCCATATCCT 61.521 60.000 0.00 0.00 0.00 3.24
1053 5086 2.567497 CCCGTCGTACCCGCCATAT 61.567 63.158 0.00 0.00 0.00 1.78
1072 5105 3.760035 CTCCCACTCCGTCACCCG 61.760 72.222 0.00 0.00 0.00 5.28
1286 5343 1.356494 GGGGAAGGAGGGGAAGGATG 61.356 65.000 0.00 0.00 0.00 3.51
1287 5344 1.006227 GGGGAAGGAGGGGAAGGAT 59.994 63.158 0.00 0.00 0.00 3.24
1323 5380 3.645660 TTGCCGCTGTCATCCCCA 61.646 61.111 0.00 0.00 0.00 4.96
1458 5530 3.869272 GGCACGGCGCTCTTGATG 61.869 66.667 6.90 0.00 41.91 3.07
1470 5542 1.996786 GCATGATGGTCTTGGGCACG 61.997 60.000 0.00 0.00 0.00 5.34
1862 5940 4.825422 TCTGTTGATGACTGAATCTGGAC 58.175 43.478 0.00 0.00 33.84 4.02
1899 5977 1.027357 AGGAGCAAACACACAAGCAG 58.973 50.000 0.00 0.00 0.00 4.24
1901 5979 0.595825 GCAGGAGCAAACACACAAGC 60.596 55.000 0.00 0.00 41.58 4.01
1902 5980 1.002033 GAGCAGGAGCAAACACACAAG 60.002 52.381 0.00 0.00 45.49 3.16
1981 6062 2.937519 TGCTAGACTGACGATGGATCT 58.062 47.619 0.00 0.00 0.00 2.75
2006 6087 1.270826 ACTGATCGAGACACACACAGG 59.729 52.381 0.00 0.00 0.00 4.00
2007 6088 2.030805 TGACTGATCGAGACACACACAG 60.031 50.000 0.00 0.00 0.00 3.66
2008 6089 1.953686 TGACTGATCGAGACACACACA 59.046 47.619 0.00 0.00 0.00 3.72
2009 6090 2.706555 TGACTGATCGAGACACACAC 57.293 50.000 0.00 0.00 0.00 3.82
2010 6091 3.255642 TGATTGACTGATCGAGACACACA 59.744 43.478 0.00 0.00 0.00 3.72
2011 6092 3.838120 TGATTGACTGATCGAGACACAC 58.162 45.455 0.00 0.00 0.00 3.82
2017 6098 4.488879 TGTGAACTGATTGACTGATCGAG 58.511 43.478 0.00 0.00 0.00 4.04
2020 6101 4.093115 CAGCTGTGAACTGATTGACTGATC 59.907 45.833 5.25 0.00 37.32 2.92
2126 6216 8.148351 ACTCTGTAACACTGTTCTTATTGCTAA 58.852 33.333 0.00 0.00 0.00 3.09
2127 6217 7.598869 CACTCTGTAACACTGTTCTTATTGCTA 59.401 37.037 0.00 0.00 0.00 3.49
2129 6219 6.202954 ACACTCTGTAACACTGTTCTTATTGC 59.797 38.462 0.00 0.00 0.00 3.56
2130 6220 7.224753 ACACACTCTGTAACACTGTTCTTATTG 59.775 37.037 0.00 0.00 0.00 1.90
2133 6229 6.040247 CACACACTCTGTAACACTGTTCTTA 58.960 40.000 0.00 0.00 0.00 2.10
2139 6235 2.797156 GAGCACACACTCTGTAACACTG 59.203 50.000 0.00 0.00 33.69 3.66
2191 6296 2.481952 AGCAGTTCAAGATTCGCAGTTC 59.518 45.455 0.00 0.00 0.00 3.01
2196 6301 0.179179 GGCAGCAGTTCAAGATTCGC 60.179 55.000 0.00 0.00 0.00 4.70
2277 6387 9.143155 ACACTCATACATACATGTAGGTTATCA 57.857 33.333 26.33 10.55 45.46 2.15
2278 6388 9.411801 CACACTCATACATACATGTAGGTTATC 57.588 37.037 26.33 0.00 45.46 1.75
2279 6389 9.143155 TCACACTCATACATACATGTAGGTTAT 57.857 33.333 26.33 15.06 45.46 1.89
2280 6390 8.528044 TCACACTCATACATACATGTAGGTTA 57.472 34.615 26.33 13.64 45.46 2.85
2281 6391 7.418337 TCACACTCATACATACATGTAGGTT 57.582 36.000 26.33 12.67 45.46 3.50
2282 6392 6.461648 GCTCACACTCATACATACATGTAGGT 60.462 42.308 24.81 24.81 45.46 3.08
2284 6394 6.743110 AGCTCACACTCATACATACATGTAG 58.257 40.000 11.91 6.29 45.46 2.74
2285 6395 6.715347 AGCTCACACTCATACATACATGTA 57.285 37.500 8.27 8.27 46.21 2.29
2286 6396 5.604758 AGCTCACACTCATACATACATGT 57.395 39.130 2.69 2.69 44.48 3.21
2287 6397 6.314648 ACAAAGCTCACACTCATACATACATG 59.685 38.462 0.00 0.00 0.00 3.21
2288 6398 6.409704 ACAAAGCTCACACTCATACATACAT 58.590 36.000 0.00 0.00 0.00 2.29
2289 6399 5.793817 ACAAAGCTCACACTCATACATACA 58.206 37.500 0.00 0.00 0.00 2.29
2290 6400 6.020599 CGTACAAAGCTCACACTCATACATAC 60.021 42.308 0.00 0.00 0.00 2.39
2291 6401 6.033966 CGTACAAAGCTCACACTCATACATA 58.966 40.000 0.00 0.00 0.00 2.29
2292 6402 4.864806 CGTACAAAGCTCACACTCATACAT 59.135 41.667 0.00 0.00 0.00 2.29
2293 6403 4.234574 CGTACAAAGCTCACACTCATACA 58.765 43.478 0.00 0.00 0.00 2.29
2294 6404 4.235360 ACGTACAAAGCTCACACTCATAC 58.765 43.478 0.00 0.00 0.00 2.39
2295 6405 4.514781 ACGTACAAAGCTCACACTCATA 57.485 40.909 0.00 0.00 0.00 2.15
2296 6406 3.386768 ACGTACAAAGCTCACACTCAT 57.613 42.857 0.00 0.00 0.00 2.90
2297 6407 2.882927 ACGTACAAAGCTCACACTCA 57.117 45.000 0.00 0.00 0.00 3.41
2298 6408 3.898529 ACTACGTACAAAGCTCACACTC 58.101 45.455 0.00 0.00 0.00 3.51
2299 6409 3.568853 AGACTACGTACAAAGCTCACACT 59.431 43.478 0.00 0.00 0.00 3.55
2300 6410 3.898529 AGACTACGTACAAAGCTCACAC 58.101 45.455 0.00 0.00 0.00 3.82
2301 6411 4.377738 CGTAGACTACGTACAAAGCTCACA 60.378 45.833 23.84 0.00 46.41 3.58
2302 6412 4.087265 CGTAGACTACGTACAAAGCTCAC 58.913 47.826 23.84 0.00 46.41 3.51
2303 6413 4.332186 CGTAGACTACGTACAAAGCTCA 57.668 45.455 23.84 0.00 46.41 4.26
2318 6428 6.219473 TGCTACACTAGTCTATACCGTAGAC 58.781 44.000 15.00 7.04 43.08 2.59
2319 6429 6.410942 TGCTACACTAGTCTATACCGTAGA 57.589 41.667 15.00 2.36 0.00 2.59
2320 6430 6.402334 GCATGCTACACTAGTCTATACCGTAG 60.402 46.154 11.37 9.01 0.00 3.51
2321 6431 5.410746 GCATGCTACACTAGTCTATACCGTA 59.589 44.000 11.37 0.00 0.00 4.02
2322 6432 4.215827 GCATGCTACACTAGTCTATACCGT 59.784 45.833 11.37 0.00 0.00 4.83
2323 6433 4.669453 CGCATGCTACACTAGTCTATACCG 60.669 50.000 17.13 0.00 0.00 4.02
2324 6434 4.215827 ACGCATGCTACACTAGTCTATACC 59.784 45.833 17.13 0.00 0.00 2.73
2325 6435 5.147865 CACGCATGCTACACTAGTCTATAC 58.852 45.833 17.13 0.00 0.00 1.47
2326 6436 4.820173 ACACGCATGCTACACTAGTCTATA 59.180 41.667 17.13 0.00 0.00 1.31
2327 6437 3.632604 ACACGCATGCTACACTAGTCTAT 59.367 43.478 17.13 0.00 0.00 1.98
2328 6438 3.014623 ACACGCATGCTACACTAGTCTA 58.985 45.455 17.13 0.00 0.00 2.59
2329 6439 1.819288 ACACGCATGCTACACTAGTCT 59.181 47.619 17.13 0.00 0.00 3.24
2330 6440 1.920574 CACACGCATGCTACACTAGTC 59.079 52.381 17.13 0.00 0.00 2.59
2331 6441 1.272490 ACACACGCATGCTACACTAGT 59.728 47.619 17.13 0.71 0.00 2.57
2332 6442 1.655597 CACACACGCATGCTACACTAG 59.344 52.381 17.13 0.00 0.00 2.57
2333 6443 1.708822 CACACACGCATGCTACACTA 58.291 50.000 17.13 0.00 0.00 2.74
2334 6444 1.568612 GCACACACGCATGCTACACT 61.569 55.000 17.13 0.00 38.84 3.55
2335 6445 1.154413 GCACACACGCATGCTACAC 60.154 57.895 17.13 0.00 38.84 2.90
2336 6446 1.567746 CTGCACACACGCATGCTACA 61.568 55.000 17.13 0.00 42.06 2.74
2337 6447 1.133253 CTGCACACACGCATGCTAC 59.867 57.895 17.13 0.00 42.06 3.58
2338 6448 0.884259 AACTGCACACACGCATGCTA 60.884 50.000 17.13 0.00 42.06 3.49
2339 6449 1.727511 AAACTGCACACACGCATGCT 61.728 50.000 17.13 0.00 42.06 3.79
2340 6450 0.871163 AAAACTGCACACACGCATGC 60.871 50.000 7.91 7.91 42.06 4.06
2341 6451 1.122849 GAAAACTGCACACACGCATG 58.877 50.000 0.00 0.00 42.06 4.06
2342 6452 0.030638 GGAAAACTGCACACACGCAT 59.969 50.000 0.00 0.00 42.06 4.73
2343 6453 1.431440 GGAAAACTGCACACACGCA 59.569 52.632 0.00 0.00 40.32 5.24
2344 6454 1.299089 GGGAAAACTGCACACACGC 60.299 57.895 0.00 0.00 0.00 5.34
2345 6455 1.101049 AGGGGAAAACTGCACACACG 61.101 55.000 0.00 0.00 0.00 4.49
2346 6456 0.385390 CAGGGGAAAACTGCACACAC 59.615 55.000 0.00 0.00 0.00 3.82
2347 6457 0.257328 TCAGGGGAAAACTGCACACA 59.743 50.000 0.00 0.00 35.94 3.72
2348 6458 1.338020 CTTCAGGGGAAAACTGCACAC 59.662 52.381 0.00 0.00 35.94 3.82
2349 6459 1.691196 CTTCAGGGGAAAACTGCACA 58.309 50.000 0.00 0.00 35.94 4.57
2350 6460 0.315251 GCTTCAGGGGAAAACTGCAC 59.685 55.000 0.00 0.00 35.94 4.57
2351 6461 0.106268 TGCTTCAGGGGAAAACTGCA 60.106 50.000 0.00 0.00 35.94 4.41
2352 6462 0.315251 GTGCTTCAGGGGAAAACTGC 59.685 55.000 0.00 0.00 35.94 4.40
2353 6463 1.338020 GTGTGCTTCAGGGGAAAACTG 59.662 52.381 0.00 0.00 37.30 3.16
2354 6464 1.064017 TGTGTGCTTCAGGGGAAAACT 60.064 47.619 0.00 0.00 31.35 2.66
2355 6465 1.067060 GTGTGTGCTTCAGGGGAAAAC 59.933 52.381 0.00 0.00 31.35 2.43
2356 6466 1.398692 GTGTGTGCTTCAGGGGAAAA 58.601 50.000 0.00 0.00 31.35 2.29
2357 6467 0.817634 CGTGTGTGCTTCAGGGGAAA 60.818 55.000 0.00 0.00 31.35 3.13
2358 6468 1.227823 CGTGTGTGCTTCAGGGGAA 60.228 57.895 0.00 0.00 0.00 3.97
2359 6469 1.978455 AACGTGTGTGCTTCAGGGGA 61.978 55.000 0.00 0.00 0.00 4.81
2360 6470 1.507141 GAACGTGTGTGCTTCAGGGG 61.507 60.000 0.00 0.00 0.00 4.79
2361 6471 1.507141 GGAACGTGTGTGCTTCAGGG 61.507 60.000 0.00 0.00 0.00 4.45
2362 6472 0.532862 AGGAACGTGTGTGCTTCAGG 60.533 55.000 0.00 0.00 0.00 3.86
2363 6473 0.861837 GAGGAACGTGTGTGCTTCAG 59.138 55.000 0.00 0.00 30.12 3.02
2364 6474 0.531974 GGAGGAACGTGTGTGCTTCA 60.532 55.000 0.00 0.00 31.31 3.02
2365 6475 0.531974 TGGAGGAACGTGTGTGCTTC 60.532 55.000 0.00 0.00 0.00 3.86
2366 6476 0.814010 GTGGAGGAACGTGTGTGCTT 60.814 55.000 0.00 0.00 0.00 3.91
2367 6477 1.227556 GTGGAGGAACGTGTGTGCT 60.228 57.895 0.00 0.00 0.00 4.40
2368 6478 2.251642 GGTGGAGGAACGTGTGTGC 61.252 63.158 0.00 0.00 0.00 4.57
2369 6479 0.600255 GAGGTGGAGGAACGTGTGTG 60.600 60.000 0.00 0.00 0.00 3.82
2370 6480 1.746517 GAGGTGGAGGAACGTGTGT 59.253 57.895 0.00 0.00 0.00 3.72
2371 6481 1.372997 CGAGGTGGAGGAACGTGTG 60.373 63.158 0.00 0.00 0.00 3.82
2372 6482 0.898789 ATCGAGGTGGAGGAACGTGT 60.899 55.000 0.00 0.00 0.00 4.49
2373 6483 0.179134 GATCGAGGTGGAGGAACGTG 60.179 60.000 0.00 0.00 0.00 4.49
2374 6484 0.611062 TGATCGAGGTGGAGGAACGT 60.611 55.000 0.00 0.00 0.00 3.99
2375 6485 0.747255 ATGATCGAGGTGGAGGAACG 59.253 55.000 0.00 0.00 0.00 3.95
2376 6486 1.202580 CCATGATCGAGGTGGAGGAAC 60.203 57.143 7.53 0.00 34.94 3.62
2377 6487 1.123077 CCATGATCGAGGTGGAGGAA 58.877 55.000 7.53 0.00 34.94 3.36
2378 6488 1.402896 GCCATGATCGAGGTGGAGGA 61.403 60.000 15.37 0.00 34.94 3.71
2379 6489 1.070445 GCCATGATCGAGGTGGAGG 59.930 63.158 15.37 2.99 34.94 4.30
2380 6490 1.070445 GGCCATGATCGAGGTGGAG 59.930 63.158 15.37 0.00 34.94 3.86
2381 6491 1.383109 AGGCCATGATCGAGGTGGA 60.383 57.895 5.01 0.00 34.94 4.02
2382 6492 1.070445 GAGGCCATGATCGAGGTGG 59.930 63.158 5.01 8.67 36.09 4.61
2383 6493 1.070445 GGAGGCCATGATCGAGGTG 59.930 63.158 5.01 0.00 0.00 4.00
2384 6494 2.143419 GGGAGGCCATGATCGAGGT 61.143 63.158 5.01 0.00 0.00 3.85
2385 6495 2.142761 TGGGAGGCCATGATCGAGG 61.143 63.158 5.01 0.00 0.00 4.63
2386 6496 1.070445 GTGGGAGGCCATGATCGAG 59.930 63.158 5.01 0.00 0.00 4.04
2387 6497 2.796193 CGTGGGAGGCCATGATCGA 61.796 63.158 5.01 0.00 0.00 3.59
2388 6498 2.104572 ATCGTGGGAGGCCATGATCG 62.105 60.000 5.01 4.28 41.03 3.69
2389 6499 1.757306 ATCGTGGGAGGCCATGATC 59.243 57.895 5.01 0.00 41.03 2.92
2390 6500 1.056125 TGATCGTGGGAGGCCATGAT 61.056 55.000 5.01 0.00 45.63 2.45
2391 6501 1.688884 TGATCGTGGGAGGCCATGA 60.689 57.895 5.01 0.00 39.60 3.07
2392 6502 1.524621 GTGATCGTGGGAGGCCATG 60.525 63.158 5.01 0.00 0.00 3.66
2393 6503 2.746375 GGTGATCGTGGGAGGCCAT 61.746 63.158 5.01 0.00 0.00 4.40
2394 6504 3.399181 GGTGATCGTGGGAGGCCA 61.399 66.667 5.01 0.00 0.00 5.36
2395 6505 2.666596 GATGGTGATCGTGGGAGGCC 62.667 65.000 0.00 0.00 0.00 5.19
2396 6506 1.227674 GATGGTGATCGTGGGAGGC 60.228 63.158 0.00 0.00 0.00 4.70
2397 6507 1.068083 CGATGGTGATCGTGGGAGG 59.932 63.158 0.00 0.00 45.43 4.30
2398 6508 4.738198 CGATGGTGATCGTGGGAG 57.262 61.111 0.00 0.00 45.43 4.30
2408 6518 2.436646 GTCTGGGCCACGATGGTG 60.437 66.667 0.00 0.03 40.46 4.17
2409 6519 4.082523 CGTCTGGGCCACGATGGT 62.083 66.667 10.77 0.00 40.46 3.55
2422 6532 0.616111 AGTTGGATCAGAGGGCGTCT 60.616 55.000 3.41 3.41 35.00 4.18
2423 6533 0.460987 CAGTTGGATCAGAGGGCGTC 60.461 60.000 0.00 0.00 0.00 5.19
2424 6534 1.194781 ACAGTTGGATCAGAGGGCGT 61.195 55.000 0.00 0.00 0.00 5.68
2425 6535 0.824109 TACAGTTGGATCAGAGGGCG 59.176 55.000 0.00 0.00 0.00 6.13
2426 6536 4.040952 ACATATACAGTTGGATCAGAGGGC 59.959 45.833 0.00 0.00 0.00 5.19
2427 6537 5.815233 ACATATACAGTTGGATCAGAGGG 57.185 43.478 0.00 0.00 0.00 4.30
2428 6538 6.295349 GGGTACATATACAGTTGGATCAGAGG 60.295 46.154 0.00 0.00 32.40 3.69
2429 6539 6.295349 GGGGTACATATACAGTTGGATCAGAG 60.295 46.154 0.00 0.00 32.40 3.35
2430 6540 5.542635 GGGGTACATATACAGTTGGATCAGA 59.457 44.000 0.00 0.00 32.40 3.27
2431 6541 5.280011 GGGGGTACATATACAGTTGGATCAG 60.280 48.000 0.00 0.00 32.40 2.90
2432 6542 4.595781 GGGGGTACATATACAGTTGGATCA 59.404 45.833 0.00 0.00 32.40 2.92
2433 6543 5.161943 GGGGGTACATATACAGTTGGATC 57.838 47.826 0.00 0.00 32.40 3.36
2452 6562 2.029623 CTCTTTGCATTGATCTGGGGG 58.970 52.381 0.00 0.00 0.00 5.40
2453 6563 1.407979 GCTCTTTGCATTGATCTGGGG 59.592 52.381 0.00 0.00 42.31 4.96
2454 6564 1.065102 CGCTCTTTGCATTGATCTGGG 59.935 52.381 0.00 0.00 43.06 4.45
2455 6565 1.741706 ACGCTCTTTGCATTGATCTGG 59.258 47.619 0.00 0.00 43.06 3.86
2456 6566 2.161012 ACACGCTCTTTGCATTGATCTG 59.839 45.455 0.00 0.00 43.06 2.90
2457 6567 2.430465 ACACGCTCTTTGCATTGATCT 58.570 42.857 0.00 0.00 43.06 2.75
2458 6568 2.907910 ACACGCTCTTTGCATTGATC 57.092 45.000 0.00 0.00 43.06 2.92
2459 6569 2.413239 CGAACACGCTCTTTGCATTGAT 60.413 45.455 0.00 0.00 43.06 2.57
2460 6570 1.069973 CGAACACGCTCTTTGCATTGA 60.070 47.619 0.00 0.00 43.06 2.57
2461 6571 1.069973 TCGAACACGCTCTTTGCATTG 60.070 47.619 0.00 0.00 43.06 2.82
2462 6572 1.225855 TCGAACACGCTCTTTGCATT 58.774 45.000 0.00 0.00 43.06 3.56
2463 6573 1.394917 GATCGAACACGCTCTTTGCAT 59.605 47.619 0.00 0.00 43.06 3.96
2464 6574 0.790207 GATCGAACACGCTCTTTGCA 59.210 50.000 0.00 0.00 43.06 4.08
2465 6575 1.059835 GAGATCGAACACGCTCTTTGC 59.940 52.381 0.00 0.00 33.66 3.68
2466 6576 2.596419 GAGAGATCGAACACGCTCTTTG 59.404 50.000 11.63 0.00 37.81 2.77
2467 6577 2.416162 GGAGAGATCGAACACGCTCTTT 60.416 50.000 15.88 0.00 37.81 2.52
2468 6578 1.133407 GGAGAGATCGAACACGCTCTT 59.867 52.381 15.88 0.00 37.81 2.85
2469 6579 0.736053 GGAGAGATCGAACACGCTCT 59.264 55.000 15.88 11.05 40.22 4.09
2470 6580 0.452184 TGGAGAGATCGAACACGCTC 59.548 55.000 10.86 10.86 33.48 5.03
2471 6581 0.171455 GTGGAGAGATCGAACACGCT 59.829 55.000 0.00 0.00 0.00 5.07
2472 6582 0.171455 AGTGGAGAGATCGAACACGC 59.829 55.000 0.00 0.00 37.16 5.34
2473 6583 1.468914 TCAGTGGAGAGATCGAACACG 59.531 52.381 0.00 0.00 37.16 4.49
2474 6584 3.577649 TTCAGTGGAGAGATCGAACAC 57.422 47.619 0.00 5.20 0.00 3.32
2475 6585 3.320826 TGTTTCAGTGGAGAGATCGAACA 59.679 43.478 0.00 0.00 0.00 3.18
2476 6586 3.914312 TGTTTCAGTGGAGAGATCGAAC 58.086 45.455 0.00 0.00 0.00 3.95
2477 6587 3.574396 ACTGTTTCAGTGGAGAGATCGAA 59.426 43.478 1.44 0.00 43.63 3.71
2478 6588 3.157881 ACTGTTTCAGTGGAGAGATCGA 58.842 45.455 1.44 0.00 43.63 3.59
2479 6589 3.584406 ACTGTTTCAGTGGAGAGATCG 57.416 47.619 1.44 0.00 43.63 3.69
2489 6599 6.258727 CACAAGTACAAGATCACTGTTTCAGT 59.741 38.462 5.86 0.00 46.51 3.41
2490 6600 6.479990 TCACAAGTACAAGATCACTGTTTCAG 59.520 38.462 5.86 0.00 37.52 3.02
2491 6601 6.345298 TCACAAGTACAAGATCACTGTTTCA 58.655 36.000 5.86 0.00 0.00 2.69
2492 6602 6.844696 TCACAAGTACAAGATCACTGTTTC 57.155 37.500 5.86 1.76 0.00 2.78
2493 6603 7.283127 ACATTCACAAGTACAAGATCACTGTTT 59.717 33.333 5.86 0.00 0.00 2.83
2494 6604 6.767902 ACATTCACAAGTACAAGATCACTGTT 59.232 34.615 5.86 0.00 0.00 3.16
2495 6605 6.203530 CACATTCACAAGTACAAGATCACTGT 59.796 38.462 5.85 5.85 0.00 3.55
2496 6606 6.203530 ACACATTCACAAGTACAAGATCACTG 59.796 38.462 0.00 0.00 0.00 3.66
2497 6607 6.291377 ACACATTCACAAGTACAAGATCACT 58.709 36.000 0.00 0.00 0.00 3.41
2498 6608 6.347725 GGACACATTCACAAGTACAAGATCAC 60.348 42.308 0.00 0.00 0.00 3.06
2499 6609 5.700832 GGACACATTCACAAGTACAAGATCA 59.299 40.000 0.00 0.00 0.00 2.92
2500 6610 5.934625 AGGACACATTCACAAGTACAAGATC 59.065 40.000 0.00 0.00 0.00 2.75
2501 6611 5.702670 CAGGACACATTCACAAGTACAAGAT 59.297 40.000 0.00 0.00 0.00 2.40
2502 6612 5.056480 CAGGACACATTCACAAGTACAAGA 58.944 41.667 0.00 0.00 0.00 3.02
2503 6613 4.816385 ACAGGACACATTCACAAGTACAAG 59.184 41.667 0.00 0.00 0.00 3.16
2504 6614 4.776349 ACAGGACACATTCACAAGTACAA 58.224 39.130 0.00 0.00 0.00 2.41
2505 6615 4.377021 GACAGGACACATTCACAAGTACA 58.623 43.478 0.00 0.00 0.00 2.90
2506 6616 3.746492 GGACAGGACACATTCACAAGTAC 59.254 47.826 0.00 0.00 0.00 2.73
2507 6617 3.554129 CGGACAGGACACATTCACAAGTA 60.554 47.826 0.00 0.00 0.00 2.24
2508 6618 2.806745 CGGACAGGACACATTCACAAGT 60.807 50.000 0.00 0.00 0.00 3.16
2509 6619 1.800586 CGGACAGGACACATTCACAAG 59.199 52.381 0.00 0.00 0.00 3.16
2510 6620 1.542328 CCGGACAGGACACATTCACAA 60.542 52.381 0.00 0.00 45.00 3.33
2511 6621 0.034756 CCGGACAGGACACATTCACA 59.965 55.000 0.00 0.00 45.00 3.58
2512 6622 1.298859 GCCGGACAGGACACATTCAC 61.299 60.000 5.05 0.00 45.00 3.18
2526 6636 2.036572 GGTCCCAAAATGGCCGGA 59.963 61.111 5.05 0.00 35.79 5.14
2532 6642 8.885722 CAATTTTGATATTCAGGTCCCAAAATG 58.114 33.333 0.00 0.00 40.87 2.32
2533 6643 8.048514 CCAATTTTGATATTCAGGTCCCAAAAT 58.951 33.333 0.00 0.00 42.44 1.82
2538 6648 6.833933 AGTACCAATTTTGATATTCAGGTCCC 59.166 38.462 0.00 0.00 0.00 4.46
2542 6652 6.322201 AGCCAGTACCAATTTTGATATTCAGG 59.678 38.462 0.00 0.00 0.00 3.86
2549 6659 4.406456 TCACAGCCAGTACCAATTTTGAT 58.594 39.130 0.00 0.00 0.00 2.57
2550 6660 3.826524 TCACAGCCAGTACCAATTTTGA 58.173 40.909 0.00 0.00 0.00 2.69
2551 6661 4.460382 AGATCACAGCCAGTACCAATTTTG 59.540 41.667 0.00 0.00 0.00 2.44
2552 6662 4.666512 AGATCACAGCCAGTACCAATTTT 58.333 39.130 0.00 0.00 0.00 1.82
2554 6664 3.521126 AGAGATCACAGCCAGTACCAATT 59.479 43.478 0.00 0.00 0.00 2.32
2555 6665 3.110705 AGAGATCACAGCCAGTACCAAT 58.889 45.455 0.00 0.00 0.00 3.16
2557 6667 2.238084 AGAGATCACAGCCAGTACCA 57.762 50.000 0.00 0.00 0.00 3.25
2560 6670 3.445008 AGGAAAGAGATCACAGCCAGTA 58.555 45.455 0.00 0.00 0.00 2.74
2561 6671 2.264455 AGGAAAGAGATCACAGCCAGT 58.736 47.619 0.00 0.00 0.00 4.00
2562 6672 4.081198 AGTTAGGAAAGAGATCACAGCCAG 60.081 45.833 0.00 0.00 0.00 4.85
2563 6673 3.840666 AGTTAGGAAAGAGATCACAGCCA 59.159 43.478 0.00 0.00 0.00 4.75
2564 6674 4.479786 AGTTAGGAAAGAGATCACAGCC 57.520 45.455 0.00 0.00 0.00 4.85
2565 6675 6.036626 GCTTAAGTTAGGAAAGAGATCACAGC 59.963 42.308 4.02 0.00 0.00 4.40
2566 6676 7.099764 TGCTTAAGTTAGGAAAGAGATCACAG 58.900 38.462 4.02 0.00 0.00 3.66
2567 6677 7.004555 TGCTTAAGTTAGGAAAGAGATCACA 57.995 36.000 4.02 0.00 0.00 3.58
2568 6678 7.466590 GCATGCTTAAGTTAGGAAAGAGATCAC 60.467 40.741 11.37 0.00 0.00 3.06
2569 6679 6.540189 GCATGCTTAAGTTAGGAAAGAGATCA 59.460 38.462 11.37 0.00 0.00 2.92
2570 6680 6.292596 CGCATGCTTAAGTTAGGAAAGAGATC 60.293 42.308 17.13 0.00 0.00 2.75
2571 6681 5.525378 CGCATGCTTAAGTTAGGAAAGAGAT 59.475 40.000 17.13 0.00 0.00 2.75
2574 6684 3.374058 GCGCATGCTTAAGTTAGGAAAGA 59.626 43.478 17.13 0.00 38.39 2.52
2594 6704 2.047465 AGTTCCAGCAGCAGAGCG 60.047 61.111 0.00 0.00 40.15 5.03
2595 6705 2.688794 GCAGTTCCAGCAGCAGAGC 61.689 63.158 0.00 0.00 0.00 4.09
2644 6754 9.747898 TGCTAATTTTCTTTCTAGTAATTGGGA 57.252 29.630 0.00 0.00 0.00 4.37
2655 6765 9.199982 CAACATCACAATGCTAATTTTCTTTCT 57.800 29.630 0.00 0.00 36.26 2.52
2656 6766 9.195411 TCAACATCACAATGCTAATTTTCTTTC 57.805 29.630 0.00 0.00 36.26 2.62
2657 6767 9.545105 TTCAACATCACAATGCTAATTTTCTTT 57.455 25.926 0.00 0.00 36.26 2.52
2658 6768 8.981647 GTTCAACATCACAATGCTAATTTTCTT 58.018 29.630 0.00 0.00 36.26 2.52
2659 6769 7.599998 GGTTCAACATCACAATGCTAATTTTCT 59.400 33.333 0.00 0.00 36.26 2.52
2660 6770 7.410728 CGGTTCAACATCACAATGCTAATTTTC 60.411 37.037 0.00 0.00 36.26 2.29
2661 6771 6.365789 CGGTTCAACATCACAATGCTAATTTT 59.634 34.615 0.00 0.00 36.26 1.82
2662 6772 5.863397 CGGTTCAACATCACAATGCTAATTT 59.137 36.000 0.00 0.00 36.26 1.82
2663 6773 5.182950 TCGGTTCAACATCACAATGCTAATT 59.817 36.000 0.00 0.00 36.26 1.40
2664 6774 4.699735 TCGGTTCAACATCACAATGCTAAT 59.300 37.500 0.00 0.00 36.26 1.73
2665 6775 4.068599 TCGGTTCAACATCACAATGCTAA 58.931 39.130 0.00 0.00 36.26 3.09
2666 6776 3.669536 TCGGTTCAACATCACAATGCTA 58.330 40.909 0.00 0.00 36.26 3.49
2667 6777 2.503331 TCGGTTCAACATCACAATGCT 58.497 42.857 0.00 0.00 36.26 3.79
2668 6778 2.987413 TCGGTTCAACATCACAATGC 57.013 45.000 0.00 0.00 36.26 3.56
2669 6779 4.797471 ACATTCGGTTCAACATCACAATG 58.203 39.130 0.00 0.00 38.93 2.82
2670 6780 5.221224 ACAACATTCGGTTCAACATCACAAT 60.221 36.000 0.00 0.00 37.72 2.71
2671 6781 4.097135 ACAACATTCGGTTCAACATCACAA 59.903 37.500 0.00 0.00 37.72 3.33
2672 6782 3.629855 ACAACATTCGGTTCAACATCACA 59.370 39.130 0.00 0.00 37.72 3.58
2673 6783 4.219033 GACAACATTCGGTTCAACATCAC 58.781 43.478 0.00 0.00 37.72 3.06
2674 6784 3.059257 CGACAACATTCGGTTCAACATCA 60.059 43.478 0.00 0.00 37.72 3.07
2675 6785 3.479006 CGACAACATTCGGTTCAACATC 58.521 45.455 0.00 0.00 37.72 3.06
2676 6786 2.350388 GCGACAACATTCGGTTCAACAT 60.350 45.455 0.00 0.00 37.72 2.71
2677 6787 1.003331 GCGACAACATTCGGTTCAACA 60.003 47.619 0.00 0.00 37.72 3.33
2678 6788 1.670326 GCGACAACATTCGGTTCAAC 58.330 50.000 0.00 0.00 37.72 3.18
2684 6794 3.186909 TGATAAGAGCGACAACATTCGG 58.813 45.455 0.00 0.00 39.50 4.30
2685 6795 4.492570 GGTTGATAAGAGCGACAACATTCG 60.493 45.833 0.00 0.00 42.61 3.34
2686 6796 4.391830 TGGTTGATAAGAGCGACAACATTC 59.608 41.667 0.00 0.00 42.61 2.67
2687 6797 4.323417 TGGTTGATAAGAGCGACAACATT 58.677 39.130 0.00 0.00 42.61 2.71
2688 6798 3.937814 TGGTTGATAAGAGCGACAACAT 58.062 40.909 0.00 0.00 42.61 2.71
2689 6799 3.394674 TGGTTGATAAGAGCGACAACA 57.605 42.857 0.00 0.00 42.61 3.33
2690 6800 4.946784 AATGGTTGATAAGAGCGACAAC 57.053 40.909 0.00 0.00 40.90 3.32
2691 6801 5.335583 CCAAAATGGTTGATAAGAGCGACAA 60.336 40.000 0.00 0.00 31.35 3.18
2692 6802 4.155826 CCAAAATGGTTGATAAGAGCGACA 59.844 41.667 0.00 0.00 31.35 4.35
2693 6803 4.438744 CCCAAAATGGTTGATAAGAGCGAC 60.439 45.833 0.00 0.00 35.17 5.19
2694 6804 3.694072 CCCAAAATGGTTGATAAGAGCGA 59.306 43.478 0.00 0.00 35.17 4.93
2695 6805 3.694072 TCCCAAAATGGTTGATAAGAGCG 59.306 43.478 0.00 0.00 35.17 5.03
2696 6806 5.595952 AGATCCCAAAATGGTTGATAAGAGC 59.404 40.000 0.00 0.00 35.17 4.09
2697 6807 6.830324 TCAGATCCCAAAATGGTTGATAAGAG 59.170 38.462 0.00 0.00 35.17 2.85
2698 6808 6.730447 TCAGATCCCAAAATGGTTGATAAGA 58.270 36.000 0.00 0.00 35.17 2.10
2699 6809 7.069085 ACATCAGATCCCAAAATGGTTGATAAG 59.931 37.037 0.00 0.00 35.17 1.73
2700 6810 6.896860 ACATCAGATCCCAAAATGGTTGATAA 59.103 34.615 0.00 0.00 35.17 1.75
2701 6811 6.434302 ACATCAGATCCCAAAATGGTTGATA 58.566 36.000 0.00 0.00 35.17 2.15
2702 6812 5.274822 ACATCAGATCCCAAAATGGTTGAT 58.725 37.500 0.00 0.00 35.17 2.57
2703 6813 4.676109 ACATCAGATCCCAAAATGGTTGA 58.324 39.130 0.00 0.00 35.17 3.18
2704 6814 5.047164 TGAACATCAGATCCCAAAATGGTTG 60.047 40.000 0.00 0.00 35.17 3.77
2705 6815 5.085920 TGAACATCAGATCCCAAAATGGTT 58.914 37.500 0.00 0.00 35.17 3.67
2706 6816 4.676109 TGAACATCAGATCCCAAAATGGT 58.324 39.130 0.00 0.00 35.17 3.55
2719 6829 5.186797 AGTTAGTTCCCTCTCTGAACATCAG 59.813 44.000 5.99 0.88 45.59 2.90
2720 6830 5.087323 AGTTAGTTCCCTCTCTGAACATCA 58.913 41.667 5.99 0.00 43.57 3.07
2721 6831 5.669164 AGTTAGTTCCCTCTCTGAACATC 57.331 43.478 5.99 0.00 43.57 3.06
2722 6832 5.280215 CCAAGTTAGTTCCCTCTCTGAACAT 60.280 44.000 5.99 0.00 43.57 2.71
2723 6833 4.040461 CCAAGTTAGTTCCCTCTCTGAACA 59.960 45.833 5.99 0.00 43.57 3.18
2724 6834 4.283722 TCCAAGTTAGTTCCCTCTCTGAAC 59.716 45.833 0.00 0.00 41.89 3.18
2725 6835 4.489737 TCCAAGTTAGTTCCCTCTCTGAA 58.510 43.478 0.00 0.00 0.00 3.02
2726 6836 4.127918 TCCAAGTTAGTTCCCTCTCTGA 57.872 45.455 0.00 0.00 0.00 3.27
2727 6837 4.284746 AGTTCCAAGTTAGTTCCCTCTCTG 59.715 45.833 0.00 0.00 0.00 3.35
2728 6838 4.284746 CAGTTCCAAGTTAGTTCCCTCTCT 59.715 45.833 0.00 0.00 0.00 3.10
2729 6839 4.563786 CCAGTTCCAAGTTAGTTCCCTCTC 60.564 50.000 0.00 0.00 0.00 3.20
2730 6840 3.328050 CCAGTTCCAAGTTAGTTCCCTCT 59.672 47.826 0.00 0.00 0.00 3.69
2731 6841 3.676093 CCAGTTCCAAGTTAGTTCCCTC 58.324 50.000 0.00 0.00 0.00 4.30
2732 6842 2.224793 GCCAGTTCCAAGTTAGTTCCCT 60.225 50.000 0.00 0.00 0.00 4.20
2733 6843 2.160205 GCCAGTTCCAAGTTAGTTCCC 58.840 52.381 0.00 0.00 0.00 3.97
2734 6844 2.814336 CAGCCAGTTCCAAGTTAGTTCC 59.186 50.000 0.00 0.00 0.00 3.62
2735 6845 3.251004 CACAGCCAGTTCCAAGTTAGTTC 59.749 47.826 0.00 0.00 0.00 3.01
2736 6846 3.118038 TCACAGCCAGTTCCAAGTTAGTT 60.118 43.478 0.00 0.00 0.00 2.24
2737 6847 2.438021 TCACAGCCAGTTCCAAGTTAGT 59.562 45.455 0.00 0.00 0.00 2.24
2738 6848 3.126001 TCACAGCCAGTTCCAAGTTAG 57.874 47.619 0.00 0.00 0.00 2.34
2739 6849 3.181445 ACATCACAGCCAGTTCCAAGTTA 60.181 43.478 0.00 0.00 0.00 2.24
2740 6850 2.233271 CATCACAGCCAGTTCCAAGTT 58.767 47.619 0.00 0.00 0.00 2.66
2741 6851 1.143684 ACATCACAGCCAGTTCCAAGT 59.856 47.619 0.00 0.00 0.00 3.16
2742 6852 1.901591 ACATCACAGCCAGTTCCAAG 58.098 50.000 0.00 0.00 0.00 3.61
2743 6853 3.500448 TTACATCACAGCCAGTTCCAA 57.500 42.857 0.00 0.00 0.00 3.53
2744 6854 3.264193 AGATTACATCACAGCCAGTTCCA 59.736 43.478 0.00 0.00 0.00 3.53
2745 6855 3.624861 CAGATTACATCACAGCCAGTTCC 59.375 47.826 0.00 0.00 0.00 3.62
2746 6856 4.093998 CACAGATTACATCACAGCCAGTTC 59.906 45.833 0.00 0.00 0.00 3.01
2747 6857 4.005650 CACAGATTACATCACAGCCAGTT 58.994 43.478 0.00 0.00 0.00 3.16
2748 6858 3.261643 TCACAGATTACATCACAGCCAGT 59.738 43.478 0.00 0.00 0.00 4.00
2749 6859 3.865446 TCACAGATTACATCACAGCCAG 58.135 45.455 0.00 0.00 0.00 4.85
2750 6860 3.979101 TCACAGATTACATCACAGCCA 57.021 42.857 0.00 0.00 0.00 4.75
2751 6861 4.510711 CAGATCACAGATTACATCACAGCC 59.489 45.833 0.00 0.00 0.00 4.85
2752 6862 5.354767 TCAGATCACAGATTACATCACAGC 58.645 41.667 0.00 0.00 0.00 4.40
2753 6863 6.985059 ACATCAGATCACAGATTACATCACAG 59.015 38.462 0.00 0.00 0.00 3.66
2754 6864 6.881570 ACATCAGATCACAGATTACATCACA 58.118 36.000 0.00 0.00 0.00 3.58
2755 6865 7.922811 TGTACATCAGATCACAGATTACATCAC 59.077 37.037 0.00 0.00 0.00 3.06
2756 6866 8.010733 TGTACATCAGATCACAGATTACATCA 57.989 34.615 0.00 0.00 0.00 3.07
2757 6867 8.759641 GTTGTACATCAGATCACAGATTACATC 58.240 37.037 0.00 4.08 0.00 3.06
2758 6868 8.481314 AGTTGTACATCAGATCACAGATTACAT 58.519 33.333 6.70 0.00 0.00 2.29
2759 6869 7.840931 AGTTGTACATCAGATCACAGATTACA 58.159 34.615 6.70 5.11 0.00 2.41
2760 6870 9.803315 TTAGTTGTACATCAGATCACAGATTAC 57.197 33.333 6.70 2.98 0.00 1.89
2761 6871 9.803315 GTTAGTTGTACATCAGATCACAGATTA 57.197 33.333 6.70 0.00 0.00 1.75
2762 6872 8.535335 AGTTAGTTGTACATCAGATCACAGATT 58.465 33.333 6.70 0.00 0.00 2.40
2763 6873 7.978414 CAGTTAGTTGTACATCAGATCACAGAT 59.022 37.037 6.70 0.00 0.00 2.90
2764 6874 7.039714 ACAGTTAGTTGTACATCAGATCACAGA 60.040 37.037 6.70 0.00 0.00 3.41
2765 6875 7.093354 ACAGTTAGTTGTACATCAGATCACAG 58.907 38.462 6.70 0.00 0.00 3.66
2766 6876 6.993079 ACAGTTAGTTGTACATCAGATCACA 58.007 36.000 6.70 0.00 0.00 3.58
2778 6888 7.033791 GCAGCTAAGATGTACAGTTAGTTGTA 58.966 38.462 27.31 6.25 37.33 2.41
2779 6889 5.869888 GCAGCTAAGATGTACAGTTAGTTGT 59.130 40.000 27.31 14.21 37.33 3.32
2780 6890 5.869344 TGCAGCTAAGATGTACAGTTAGTTG 59.131 40.000 25.15 25.15 37.78 3.16
2781 6891 6.037786 TGCAGCTAAGATGTACAGTTAGTT 57.962 37.500 20.78 15.65 0.00 2.24
2782 6892 5.655488 CTGCAGCTAAGATGTACAGTTAGT 58.345 41.667 20.78 10.73 0.00 2.24
2783 6893 4.505922 GCTGCAGCTAAGATGTACAGTTAG 59.494 45.833 31.33 17.70 38.21 2.34
2784 6894 4.433615 GCTGCAGCTAAGATGTACAGTTA 58.566 43.478 31.33 1.12 38.21 2.24
2785 6895 3.265791 GCTGCAGCTAAGATGTACAGTT 58.734 45.455 31.33 0.00 38.21 3.16
2786 6896 2.898705 GCTGCAGCTAAGATGTACAGT 58.101 47.619 31.33 0.00 38.21 3.55
2799 6909 2.768492 CCGAAATGGGAGCTGCAGC 61.768 63.158 31.53 31.53 42.49 5.25
2800 6910 3.506108 CCGAAATGGGAGCTGCAG 58.494 61.111 10.11 10.11 0.00 4.41
2809 6919 1.754234 CCTTCCCTGCCCGAAATGG 60.754 63.158 0.00 0.00 37.55 3.16
2810 6920 0.749454 CTCCTTCCCTGCCCGAAATG 60.749 60.000 0.00 0.00 0.00 2.32
2811 6921 0.914417 TCTCCTTCCCTGCCCGAAAT 60.914 55.000 0.00 0.00 0.00 2.17
2812 6922 1.131303 TTCTCCTTCCCTGCCCGAAA 61.131 55.000 0.00 0.00 0.00 3.46
2813 6923 1.131303 TTTCTCCTTCCCTGCCCGAA 61.131 55.000 0.00 0.00 0.00 4.30
2814 6924 1.537889 TTTCTCCTTCCCTGCCCGA 60.538 57.895 0.00 0.00 0.00 5.14
2815 6925 1.078143 CTTTCTCCTTCCCTGCCCG 60.078 63.158 0.00 0.00 0.00 6.13
2816 6926 0.034960 GACTTTCTCCTTCCCTGCCC 60.035 60.000 0.00 0.00 0.00 5.36
2817 6927 0.034960 GGACTTTCTCCTTCCCTGCC 60.035 60.000 0.00 0.00 35.89 4.85
2818 6928 0.034960 GGGACTTTCTCCTTCCCTGC 60.035 60.000 0.00 0.00 45.14 4.85
2822 6932 3.264450 TCAGATTGGGACTTTCTCCTTCC 59.736 47.826 0.00 0.00 39.39 3.46
2823 6933 4.559862 TCAGATTGGGACTTTCTCCTTC 57.440 45.455 0.00 0.00 39.39 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.