Multiple sequence alignment - TraesCS3D01G519400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G519400 chr3D 100.000 3200 0 0 1 3200 602234174 602237373 0.000000e+00 5910.0
1 TraesCS3D01G519400 chr3D 78.817 1251 211 40 1007 2227 602261537 602260311 0.000000e+00 793.0
2 TraesCS3D01G519400 chr3D 93.066 274 19 0 482 755 587792599 587792872 4.970000e-108 401.0
3 TraesCS3D01G519400 chr3D 87.719 342 20 7 2861 3200 602212503 602212824 2.330000e-101 379.0
4 TraesCS3D01G519400 chr3D 86.628 344 40 3 2861 3200 597299686 597299345 3.010000e-100 375.0
5 TraesCS3D01G519400 chr3B 95.104 1675 66 9 753 2418 809437643 809439310 0.000000e+00 2625.0
6 TraesCS3D01G519400 chr3B 88.819 796 51 20 2416 3200 809439458 809440226 0.000000e+00 942.0
7 TraesCS3D01G519400 chr3B 81.541 623 76 22 1010 1605 809237407 809236797 8.030000e-131 477.0
8 TraesCS3D01G519400 chr3B 89.118 340 23 5 2861 3200 809349284 809349609 8.260000e-111 411.0
9 TraesCS3D01G519400 chr3B 88.824 340 23 6 2861 3200 809236711 809236387 1.380000e-108 403.0
10 TraesCS3D01G519400 chr3B 84.597 422 43 12 963 1370 809510252 809509839 1.790000e-107 399.0
11 TraesCS3D01G519400 chr3B 88.000 200 21 3 2670 2866 809349051 809349250 1.920000e-57 233.0
12 TraesCS3D01G519400 chr3B 95.000 100 5 0 385 484 809437551 809437650 1.190000e-34 158.0
13 TraesCS3D01G519400 chr3A 89.881 1344 104 15 886 2227 730851696 730850383 0.000000e+00 1700.0
14 TraesCS3D01G519400 chr3A 91.855 798 36 12 2230 3005 730850349 730849559 0.000000e+00 1086.0
15 TraesCS3D01G519400 chr3A 79.173 1306 201 48 963 2227 731844343 731843068 0.000000e+00 839.0
16 TraesCS3D01G519400 chr3A 78.999 1319 197 51 963 2227 731894420 731893128 0.000000e+00 828.0
17 TraesCS3D01G519400 chr3A 86.168 535 60 8 2606 3129 730892488 730891957 1.670000e-157 566.0
18 TraesCS3D01G519400 chr3A 90.385 260 16 5 232 484 730852112 730851855 1.840000e-87 333.0
19 TraesCS3D01G519400 chr3A 95.902 122 5 0 753 874 730851862 730851741 7.000000e-47 198.0
20 TraesCS3D01G519400 chr3A 95.699 93 2 1 3108 3200 730849557 730849467 7.150000e-32 148.0
21 TraesCS3D01G519400 chr3A 95.349 43 0 1 3158 3200 730891958 730891918 2.060000e-07 67.6
22 TraesCS3D01G519400 chr2D 90.885 373 29 3 1 368 403383034 403383406 2.220000e-136 496.0
23 TraesCS3D01G519400 chr2D 93.431 274 18 0 485 758 339196794 339196521 1.070000e-109 407.0
24 TraesCS3D01G519400 chr1D 90.237 379 30 5 3 376 474008874 474008498 3.710000e-134 488.0
25 TraesCS3D01G519400 chr1D 91.519 283 22 1 480 760 486140804 486140522 3.870000e-104 388.0
26 TraesCS3D01G519400 chr7B 89.757 371 34 2 1 367 457799957 457799587 3.740000e-129 472.0
27 TraesCS3D01G519400 chr7B 93.190 279 19 0 482 760 107926341 107926063 8.260000e-111 411.0
28 TraesCS3D01G519400 chr7B 73.269 823 182 24 1415 2218 750116196 750115393 1.890000e-67 267.0
29 TraesCS3D01G519400 chr4D 89.730 370 34 3 1 366 77292668 77293037 1.340000e-128 470.0
30 TraesCS3D01G519400 chr4D 88.949 371 38 2 1 368 5931279 5931649 3.760000e-124 455.0
31 TraesCS3D01G519400 chr4D 88.114 387 40 4 1 383 380279329 380279713 3.760000e-124 455.0
32 TraesCS3D01G519400 chr4D 93.750 272 17 0 484 755 281075443 281075714 2.970000e-110 409.0
33 TraesCS3D01G519400 chr2A 88.743 382 37 5 1 379 726345925 726346303 2.250000e-126 462.0
34 TraesCS3D01G519400 chr4B 89.218 371 35 3 2 368 567644598 567644229 2.910000e-125 459.0
35 TraesCS3D01G519400 chr7A 89.722 360 32 4 13 368 163228264 163227906 3.760000e-124 455.0
36 TraesCS3D01G519400 chr7A 72.135 1213 242 56 1052 2226 11312149 11310995 2.430000e-71 279.0
37 TraesCS3D01G519400 chr7A 80.247 324 55 5 1048 1371 11230291 11229977 5.340000e-58 235.0
38 TraesCS3D01G519400 chr6D 94.182 275 16 0 484 758 183017157 183016883 1.370000e-113 420.0
39 TraesCS3D01G519400 chr5D 93.214 280 19 0 481 760 217753823 217754102 2.300000e-111 412.0
40 TraesCS3D01G519400 chr5D 94.286 35 2 0 1043 1077 552051612 552051578 2.000000e-03 54.7
41 TraesCS3D01G519400 chr5D 100.000 28 0 0 1043 1070 552458352 552458325 6.000000e-03 52.8
42 TraesCS3D01G519400 chr7D 93.750 272 17 0 490 761 266504648 266504377 2.970000e-110 409.0
43 TraesCS3D01G519400 chr7D 92.553 282 19 2 481 761 326122830 326123110 1.380000e-108 403.0
44 TraesCS3D01G519400 chr7D 73.281 1018 207 37 1048 2040 49186880 49187857 2.400000e-81 313.0
45 TraesCS3D01G519400 chr7D 81.096 365 52 12 1011 1371 27228293 27228644 3.140000e-70 276.0
46 TraesCS3D01G519400 chr7D 80.435 322 52 10 1048 1365 12168560 12168246 5.340000e-58 235.0
47 TraesCS3D01G519400 chr7D 78.571 364 65 9 1010 1371 11727506 11727154 8.930000e-56 228.0
48 TraesCS3D01G519400 chr7D 83.168 202 27 6 1160 1359 49163947 49164143 9.120000e-41 178.0
49 TraesCS3D01G519400 chr7D 88.889 72 7 1 2155 2226 11705663 11705593 1.580000e-13 87.9
50 TraesCS3D01G519400 chr7D 74.699 166 29 10 1038 1192 24341715 24341878 9.580000e-06 62.1
51 TraesCS3D01G519400 chr4A 73.344 1208 229 53 1052 2226 726073020 726074167 8.440000e-96 361.0
52 TraesCS3D01G519400 chr4A 78.533 368 57 17 1013 1371 703553982 703554336 4.150000e-54 222.0
53 TraesCS3D01G519400 chr4A 81.609 261 45 1 1113 1373 725872534 725872791 2.500000e-51 213.0
54 TraesCS3D01G519400 chr4A 78.221 326 58 8 1048 1371 726027636 726027950 2.520000e-46 196.0
55 TraesCS3D01G519400 chr4A 74.830 294 58 11 1937 2218 725865096 725865385 5.610000e-23 119.0
56 TraesCS3D01G519400 chr4A 94.340 53 3 0 2155 2207 726108735 726108787 7.360000e-12 82.4
57 TraesCS3D01G519400 chr4A 94.286 35 2 0 1043 1077 616238355 616238321 2.000000e-03 54.7
58 TraesCS3D01G519400 chr4A 94.286 35 2 0 1043 1077 632939336 632939370 2.000000e-03 54.7
59 TraesCS3D01G519400 chr4A 100.000 28 0 0 1043 1070 616150881 616150908 6.000000e-03 52.8
60 TraesCS3D01G519400 chr5B 81.784 269 36 9 147 409 74382301 74382040 2.500000e-51 213.0
61 TraesCS3D01G519400 chr5B 76.549 226 44 6 1036 1261 15034226 15034442 7.250000e-22 115.0
62 TraesCS3D01G519400 chr5B 94.286 35 2 0 1043 1077 677812072 677812106 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G519400 chr3D 602234174 602237373 3199 False 5910.000000 5910 100.000000 1 3200 1 chr3D.!!$F3 3199
1 TraesCS3D01G519400 chr3D 602260311 602261537 1226 True 793.000000 793 78.817000 1007 2227 1 chr3D.!!$R2 1220
2 TraesCS3D01G519400 chr3B 809437551 809440226 2675 False 1241.666667 2625 92.974333 385 3200 3 chr3B.!!$F2 2815
3 TraesCS3D01G519400 chr3B 809236387 809237407 1020 True 440.000000 477 85.182500 1010 3200 2 chr3B.!!$R2 2190
4 TraesCS3D01G519400 chr3B 809349051 809349609 558 False 322.000000 411 88.559000 2670 3200 2 chr3B.!!$F1 530
5 TraesCS3D01G519400 chr3A 731843068 731844343 1275 True 839.000000 839 79.173000 963 2227 1 chr3A.!!$R1 1264
6 TraesCS3D01G519400 chr3A 731893128 731894420 1292 True 828.000000 828 78.999000 963 2227 1 chr3A.!!$R2 1264
7 TraesCS3D01G519400 chr3A 730849467 730852112 2645 True 693.000000 1700 92.744400 232 3200 5 chr3A.!!$R3 2968
8 TraesCS3D01G519400 chr3A 730891918 730892488 570 True 316.800000 566 90.758500 2606 3200 2 chr3A.!!$R4 594
9 TraesCS3D01G519400 chr7B 750115393 750116196 803 True 267.000000 267 73.269000 1415 2218 1 chr7B.!!$R3 803
10 TraesCS3D01G519400 chr7A 11310995 11312149 1154 True 279.000000 279 72.135000 1052 2226 1 chr7A.!!$R2 1174
11 TraesCS3D01G519400 chr7D 49186880 49187857 977 False 313.000000 313 73.281000 1048 2040 1 chr7D.!!$F4 992
12 TraesCS3D01G519400 chr4A 726073020 726074167 1147 False 361.000000 361 73.344000 1052 2226 1 chr4A.!!$F7 1174

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
627 634 0.042731 AGACTCATCCTTTCCCGGGA 59.957 55.0 22.63 22.63 37.26 5.14 F
637 644 0.105408 TTTCCCGGGAAGCGCTATAC 59.895 55.0 33.64 5.38 35.38 1.47 F
639 646 0.111061 TCCCGGGAAGCGCTATACTA 59.889 55.0 24.50 0.00 0.00 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1964 2109 0.103937 CGGGATGACCTTCTCTGAGC 59.896 60.000 0.0 0.0 36.97 4.26 R
2137 2288 1.557099 AGTTCACCACTATCGGAGCA 58.443 50.000 0.0 0.0 31.97 4.26 R
2629 3009 3.803555 CAGCAGAGAATCGACAAACAAC 58.196 45.455 0.0 0.0 42.67 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.127533 GTCTGGCATCGTGGTGGC 61.128 66.667 0.00 0.00 44.24 5.01
18 19 4.758251 TCTGGCATCGTGGTGGCG 62.758 66.667 2.05 0.00 46.68 5.69
23 24 3.179265 CATCGTGGTGGCGTCGAC 61.179 66.667 5.18 5.18 36.46 4.20
24 25 4.771356 ATCGTGGTGGCGTCGACG 62.771 66.667 32.57 32.57 39.98 5.12
43 44 4.020617 CAGGCCAGGCAAGGTCGA 62.021 66.667 15.19 0.00 38.64 4.20
44 45 3.011517 AGGCCAGGCAAGGTCGAT 61.012 61.111 15.19 0.00 38.64 3.59
45 46 2.825836 GGCCAGGCAAGGTCGATG 60.826 66.667 15.19 0.00 0.00 3.84
46 47 3.512516 GCCAGGCAAGGTCGATGC 61.513 66.667 6.55 0.73 43.08 3.91
47 48 3.197790 CCAGGCAAGGTCGATGCG 61.198 66.667 3.56 0.00 44.75 4.73
48 49 2.434884 CAGGCAAGGTCGATGCGT 60.435 61.111 3.56 1.35 44.75 5.24
49 50 2.125512 AGGCAAGGTCGATGCGTC 60.126 61.111 3.56 0.00 44.75 5.19
50 51 2.434185 GGCAAGGTCGATGCGTCA 60.434 61.111 6.75 0.00 44.75 4.35
51 52 2.456119 GGCAAGGTCGATGCGTCAG 61.456 63.158 6.75 0.00 44.75 3.51
52 53 1.738099 GCAAGGTCGATGCGTCAGT 60.738 57.895 6.75 0.00 33.57 3.41
53 54 1.291877 GCAAGGTCGATGCGTCAGTT 61.292 55.000 6.75 0.00 33.57 3.16
54 55 0.716108 CAAGGTCGATGCGTCAGTTC 59.284 55.000 6.75 0.00 0.00 3.01
55 56 0.389948 AAGGTCGATGCGTCAGTTCC 60.390 55.000 6.75 2.51 0.00 3.62
56 57 1.215647 GGTCGATGCGTCAGTTCCT 59.784 57.895 6.75 0.00 0.00 3.36
57 58 1.078759 GGTCGATGCGTCAGTTCCTG 61.079 60.000 6.75 0.00 0.00 3.86
58 59 1.446099 TCGATGCGTCAGTTCCTGC 60.446 57.895 6.75 0.00 0.00 4.85
59 60 1.446792 CGATGCGTCAGTTCCTGCT 60.447 57.895 6.75 0.00 0.00 4.24
60 61 1.416813 CGATGCGTCAGTTCCTGCTC 61.417 60.000 6.75 0.00 0.00 4.26
61 62 0.108424 GATGCGTCAGTTCCTGCTCT 60.108 55.000 0.00 0.00 0.00 4.09
62 63 0.108424 ATGCGTCAGTTCCTGCTCTC 60.108 55.000 0.00 0.00 0.00 3.20
63 64 1.803519 GCGTCAGTTCCTGCTCTCG 60.804 63.158 0.00 0.00 0.00 4.04
64 65 1.876664 CGTCAGTTCCTGCTCTCGA 59.123 57.895 0.00 0.00 0.00 4.04
65 66 0.179176 CGTCAGTTCCTGCTCTCGAG 60.179 60.000 5.93 5.93 0.00 4.04
66 67 1.169577 GTCAGTTCCTGCTCTCGAGA 58.830 55.000 15.70 15.70 0.00 4.04
67 68 1.748493 GTCAGTTCCTGCTCTCGAGAT 59.252 52.381 17.03 0.00 0.00 2.75
68 69 1.747924 TCAGTTCCTGCTCTCGAGATG 59.252 52.381 17.03 8.81 0.00 2.90
69 70 1.110442 AGTTCCTGCTCTCGAGATGG 58.890 55.000 17.03 17.55 0.00 3.51
70 71 1.107114 GTTCCTGCTCTCGAGATGGA 58.893 55.000 17.03 19.45 32.40 3.41
71 72 1.107114 TTCCTGCTCTCGAGATGGAC 58.893 55.000 23.10 12.51 33.41 4.02
72 73 0.753479 TCCTGCTCTCGAGATGGACC 60.753 60.000 17.03 3.16 0.00 4.46
73 74 1.358402 CTGCTCTCGAGATGGACCG 59.642 63.158 17.03 4.02 0.00 4.79
74 75 2.069465 CTGCTCTCGAGATGGACCGG 62.069 65.000 17.03 0.00 0.00 5.28
75 76 2.122167 GCTCTCGAGATGGACCGGT 61.122 63.158 17.03 6.92 0.00 5.28
76 77 1.730487 CTCTCGAGATGGACCGGTG 59.270 63.158 14.63 0.00 0.00 4.94
77 78 0.748367 CTCTCGAGATGGACCGGTGA 60.748 60.000 14.63 0.00 0.00 4.02
78 79 0.323087 TCTCGAGATGGACCGGTGAA 60.323 55.000 14.63 0.00 0.00 3.18
79 80 0.530744 CTCGAGATGGACCGGTGAAA 59.469 55.000 14.63 0.00 0.00 2.69
80 81 0.530744 TCGAGATGGACCGGTGAAAG 59.469 55.000 14.63 0.00 0.00 2.62
81 82 0.530744 CGAGATGGACCGGTGAAAGA 59.469 55.000 14.63 0.00 0.00 2.52
82 83 1.137086 CGAGATGGACCGGTGAAAGAT 59.863 52.381 14.63 0.00 0.00 2.40
83 84 2.555199 GAGATGGACCGGTGAAAGATG 58.445 52.381 14.63 0.00 0.00 2.90
84 85 1.210478 AGATGGACCGGTGAAAGATGG 59.790 52.381 14.63 0.00 0.00 3.51
85 86 0.394352 ATGGACCGGTGAAAGATGGC 60.394 55.000 14.63 0.00 0.00 4.40
86 87 2.106683 GGACCGGTGAAAGATGGCG 61.107 63.158 14.63 0.00 0.00 5.69
87 88 2.046314 ACCGGTGAAAGATGGCGG 60.046 61.111 6.12 0.00 0.00 6.13
88 89 3.508840 CCGGTGAAAGATGGCGGC 61.509 66.667 0.00 0.00 0.00 6.53
89 90 3.864686 CGGTGAAAGATGGCGGCG 61.865 66.667 0.51 0.51 0.00 6.46
90 91 3.508840 GGTGAAAGATGGCGGCGG 61.509 66.667 9.78 0.00 0.00 6.13
91 92 4.179579 GTGAAAGATGGCGGCGGC 62.180 66.667 27.76 27.76 38.90 6.53
92 93 4.713735 TGAAAGATGGCGGCGGCA 62.714 61.111 37.75 37.75 43.52 5.69
93 94 3.439540 GAAAGATGGCGGCGGCAA 61.440 61.111 39.04 22.74 42.43 4.52
94 95 3.683587 GAAAGATGGCGGCGGCAAC 62.684 63.158 39.04 34.85 42.43 4.17
102 103 4.069232 CGGCGGCAACCTCTGAGA 62.069 66.667 10.53 0.00 0.00 3.27
103 104 2.125350 GGCGGCAACCTCTGAGAG 60.125 66.667 6.17 1.57 0.00 3.20
104 105 2.659610 GCGGCAACCTCTGAGAGT 59.340 61.111 8.88 0.00 0.00 3.24
105 106 1.739562 GCGGCAACCTCTGAGAGTG 60.740 63.158 8.88 2.18 0.00 3.51
106 107 1.739562 CGGCAACCTCTGAGAGTGC 60.740 63.158 14.60 14.60 32.99 4.40
107 108 1.739562 GGCAACCTCTGAGAGTGCG 60.740 63.158 15.92 1.52 34.06 5.34
108 109 2.386660 GCAACCTCTGAGAGTGCGC 61.387 63.158 8.88 0.00 0.00 6.09
109 110 1.739562 CAACCTCTGAGAGTGCGCC 60.740 63.158 4.18 0.00 0.00 6.53
110 111 3.288308 AACCTCTGAGAGTGCGCCG 62.288 63.158 4.18 0.00 0.00 6.46
111 112 4.504916 CCTCTGAGAGTGCGCCGG 62.505 72.222 4.18 0.00 0.00 6.13
112 113 3.753434 CTCTGAGAGTGCGCCGGT 61.753 66.667 4.18 0.00 0.00 5.28
113 114 3.691744 CTCTGAGAGTGCGCCGGTC 62.692 68.421 4.18 0.00 0.00 4.79
114 115 3.753434 CTGAGAGTGCGCCGGTCT 61.753 66.667 4.18 3.55 0.00 3.85
115 116 3.978723 CTGAGAGTGCGCCGGTCTG 62.979 68.421 4.18 0.00 0.00 3.51
116 117 4.803426 GAGAGTGCGCCGGTCTGG 62.803 72.222 4.18 0.00 42.50 3.86
123 124 4.293648 CGCCGGTCTGGTGTGTGA 62.294 66.667 1.90 0.00 43.63 3.58
124 125 2.665185 GCCGGTCTGGTGTGTGAC 60.665 66.667 1.90 0.00 41.21 3.67
125 126 2.030562 CCGGTCTGGTGTGTGACC 59.969 66.667 0.00 0.00 46.69 4.02
127 128 3.236391 GGTCTGGTGTGTGACCCA 58.764 61.111 0.00 0.00 45.45 4.51
129 130 1.696097 GGTCTGGTGTGTGACCCAGT 61.696 60.000 6.32 0.00 46.79 4.00
130 131 0.249911 GTCTGGTGTGTGACCCAGTC 60.250 60.000 6.32 0.00 46.79 3.51
131 132 1.071471 CTGGTGTGTGACCCAGTCC 59.929 63.158 0.00 0.00 45.45 3.85
132 133 1.383943 TGGTGTGTGACCCAGTCCT 60.384 57.895 0.00 0.00 45.45 3.85
133 134 1.071471 GGTGTGTGACCCAGTCCTG 59.929 63.158 0.00 0.00 39.10 3.86
142 143 4.963878 CCAGTCCTGGTATGTGGC 57.036 61.111 5.11 0.00 45.53 5.01
143 144 2.300996 CCAGTCCTGGTATGTGGCT 58.699 57.895 5.11 0.00 45.53 4.75
144 145 0.107508 CCAGTCCTGGTATGTGGCTG 60.108 60.000 5.11 0.00 45.53 4.85
145 146 0.107508 CAGTCCTGGTATGTGGCTGG 60.108 60.000 0.00 0.00 0.00 4.85
146 147 1.224592 GTCCTGGTATGTGGCTGGG 59.775 63.158 0.00 0.00 0.00 4.45
147 148 2.124151 CCTGGTATGTGGCTGGGC 60.124 66.667 0.00 0.00 0.00 5.36
148 149 2.683465 CCTGGTATGTGGCTGGGCT 61.683 63.158 0.00 0.00 0.00 5.19
149 150 1.452651 CTGGTATGTGGCTGGGCTG 60.453 63.158 0.00 0.00 0.00 4.85
150 151 2.124151 GGTATGTGGCTGGGCTGG 60.124 66.667 0.00 0.00 0.00 4.85
151 152 2.124151 GTATGTGGCTGGGCTGGG 60.124 66.667 0.00 0.00 0.00 4.45
152 153 3.419580 TATGTGGCTGGGCTGGGG 61.420 66.667 0.00 0.00 0.00 4.96
162 163 4.115199 GGCTGGGGCATCCGACTT 62.115 66.667 0.00 0.00 40.87 3.01
163 164 2.044946 GCTGGGGCATCCGACTTT 60.045 61.111 0.00 0.00 38.76 2.66
164 165 1.223487 GCTGGGGCATCCGACTTTA 59.777 57.895 0.00 0.00 38.76 1.85
165 166 0.815615 GCTGGGGCATCCGACTTTAG 60.816 60.000 0.00 0.00 38.76 1.85
166 167 0.830648 CTGGGGCATCCGACTTTAGA 59.169 55.000 0.00 0.00 38.76 2.10
167 168 1.417890 CTGGGGCATCCGACTTTAGAT 59.582 52.381 0.00 0.00 38.76 1.98
168 169 1.140852 TGGGGCATCCGACTTTAGATG 59.859 52.381 0.00 0.00 42.30 2.90
169 170 1.141053 GGGGCATCCGACTTTAGATGT 59.859 52.381 0.00 0.00 41.60 3.06
170 171 2.421529 GGGGCATCCGACTTTAGATGTT 60.422 50.000 0.00 0.00 41.60 2.71
171 172 3.181458 GGGGCATCCGACTTTAGATGTTA 60.181 47.826 0.00 0.00 41.60 2.41
172 173 4.058817 GGGCATCCGACTTTAGATGTTAG 58.941 47.826 0.00 0.00 41.60 2.34
173 174 4.202223 GGGCATCCGACTTTAGATGTTAGA 60.202 45.833 0.00 0.00 41.60 2.10
174 175 4.745620 GGCATCCGACTTTAGATGTTAGAC 59.254 45.833 0.00 0.00 41.60 2.59
175 176 5.452077 GGCATCCGACTTTAGATGTTAGACT 60.452 44.000 0.00 0.00 41.60 3.24
176 177 6.043411 GCATCCGACTTTAGATGTTAGACTT 58.957 40.000 0.00 0.00 41.60 3.01
177 178 7.201145 GCATCCGACTTTAGATGTTAGACTTA 58.799 38.462 0.00 0.00 41.60 2.24
178 179 7.380065 GCATCCGACTTTAGATGTTAGACTTAG 59.620 40.741 0.00 0.00 41.60 2.18
179 180 7.330900 TCCGACTTTAGATGTTAGACTTAGG 57.669 40.000 0.00 0.00 0.00 2.69
180 181 6.888632 TCCGACTTTAGATGTTAGACTTAGGT 59.111 38.462 0.00 0.00 0.00 3.08
181 182 6.973474 CCGACTTTAGATGTTAGACTTAGGTG 59.027 42.308 0.00 0.00 0.00 4.00
182 183 6.472808 CGACTTTAGATGTTAGACTTAGGTGC 59.527 42.308 0.00 0.00 0.00 5.01
183 184 6.331061 ACTTTAGATGTTAGACTTAGGTGCG 58.669 40.000 0.00 0.00 0.00 5.34
184 185 6.152323 ACTTTAGATGTTAGACTTAGGTGCGA 59.848 38.462 0.00 0.00 0.00 5.10
185 186 6.710597 TTAGATGTTAGACTTAGGTGCGAT 57.289 37.500 0.00 0.00 0.00 4.58
186 187 4.938080 AGATGTTAGACTTAGGTGCGATG 58.062 43.478 0.00 0.00 0.00 3.84
187 188 4.402793 AGATGTTAGACTTAGGTGCGATGT 59.597 41.667 0.00 0.00 0.00 3.06
188 189 4.106029 TGTTAGACTTAGGTGCGATGTC 57.894 45.455 0.00 0.00 0.00 3.06
189 190 3.762288 TGTTAGACTTAGGTGCGATGTCT 59.238 43.478 0.00 0.00 40.52 3.41
190 191 4.945543 TGTTAGACTTAGGTGCGATGTCTA 59.054 41.667 0.00 0.00 38.67 2.59
191 192 5.593095 TGTTAGACTTAGGTGCGATGTCTAT 59.407 40.000 0.00 0.00 39.16 1.98
192 193 6.096423 TGTTAGACTTAGGTGCGATGTCTATT 59.904 38.462 0.00 0.00 39.16 1.73
193 194 5.599999 AGACTTAGGTGCGATGTCTATTT 57.400 39.130 0.00 0.00 36.39 1.40
194 195 6.710597 AGACTTAGGTGCGATGTCTATTTA 57.289 37.500 0.00 0.00 36.39 1.40
195 196 7.108841 AGACTTAGGTGCGATGTCTATTTAA 57.891 36.000 0.00 0.00 36.39 1.52
196 197 7.727181 AGACTTAGGTGCGATGTCTATTTAAT 58.273 34.615 0.00 0.00 36.39 1.40
197 198 8.204836 AGACTTAGGTGCGATGTCTATTTAATT 58.795 33.333 0.00 0.00 36.39 1.40
198 199 8.732746 ACTTAGGTGCGATGTCTATTTAATTT 57.267 30.769 0.00 0.00 0.00 1.82
199 200 8.612619 ACTTAGGTGCGATGTCTATTTAATTTG 58.387 33.333 0.00 0.00 0.00 2.32
200 201 6.377327 AGGTGCGATGTCTATTTAATTTGG 57.623 37.500 0.00 0.00 0.00 3.28
201 202 4.976116 GGTGCGATGTCTATTTAATTTGGC 59.024 41.667 0.00 0.00 0.00 4.52
202 203 5.221048 GGTGCGATGTCTATTTAATTTGGCT 60.221 40.000 0.00 0.00 0.00 4.75
203 204 5.909610 GTGCGATGTCTATTTAATTTGGCTC 59.090 40.000 0.00 0.00 0.00 4.70
204 205 5.140177 GCGATGTCTATTTAATTTGGCTCG 58.860 41.667 0.00 0.00 0.00 5.03
205 206 5.679906 CGATGTCTATTTAATTTGGCTCGG 58.320 41.667 0.00 0.00 0.00 4.63
206 207 5.465390 CGATGTCTATTTAATTTGGCTCGGA 59.535 40.000 0.00 0.00 0.00 4.55
207 208 6.564125 CGATGTCTATTTAATTTGGCTCGGAC 60.564 42.308 0.00 0.00 0.00 4.79
208 209 5.492895 TGTCTATTTAATTTGGCTCGGACA 58.507 37.500 0.00 0.00 0.00 4.02
209 210 6.119536 TGTCTATTTAATTTGGCTCGGACAT 58.880 36.000 0.00 0.00 0.00 3.06
210 211 6.601613 TGTCTATTTAATTTGGCTCGGACATT 59.398 34.615 0.00 0.00 0.00 2.71
211 212 7.132863 GTCTATTTAATTTGGCTCGGACATTC 58.867 38.462 0.00 0.00 0.00 2.67
212 213 4.349663 TTTAATTTGGCTCGGACATTCG 57.650 40.909 0.00 0.00 0.00 3.34
213 214 1.094785 AATTTGGCTCGGACATTCGG 58.905 50.000 0.00 0.00 0.00 4.30
214 215 1.376609 ATTTGGCTCGGACATTCGGC 61.377 55.000 0.00 0.00 0.00 5.54
215 216 2.739849 TTTGGCTCGGACATTCGGCA 62.740 55.000 0.00 0.00 0.00 5.69
216 217 3.195698 GGCTCGGACATTCGGCAC 61.196 66.667 0.00 0.00 0.00 5.01
217 218 3.195698 GCTCGGACATTCGGCACC 61.196 66.667 0.00 0.00 0.00 5.01
218 219 2.511600 CTCGGACATTCGGCACCC 60.512 66.667 0.00 0.00 0.00 4.61
219 220 4.090588 TCGGACATTCGGCACCCC 62.091 66.667 0.00 0.00 0.00 4.95
220 221 4.096003 CGGACATTCGGCACCCCT 62.096 66.667 0.00 0.00 0.00 4.79
221 222 2.355115 GGACATTCGGCACCCCTT 59.645 61.111 0.00 0.00 0.00 3.95
222 223 1.749258 GGACATTCGGCACCCCTTC 60.749 63.158 0.00 0.00 0.00 3.46
223 224 1.002624 GACATTCGGCACCCCTTCA 60.003 57.895 0.00 0.00 0.00 3.02
224 225 0.394352 GACATTCGGCACCCCTTCAT 60.394 55.000 0.00 0.00 0.00 2.57
225 226 0.394352 ACATTCGGCACCCCTTCATC 60.394 55.000 0.00 0.00 0.00 2.92
226 227 0.394216 CATTCGGCACCCCTTCATCA 60.394 55.000 0.00 0.00 0.00 3.07
227 228 0.331278 ATTCGGCACCCCTTCATCAA 59.669 50.000 0.00 0.00 0.00 2.57
228 229 0.111446 TTCGGCACCCCTTCATCAAA 59.889 50.000 0.00 0.00 0.00 2.69
229 230 0.322456 TCGGCACCCCTTCATCAAAG 60.322 55.000 0.00 0.00 34.52 2.77
241 242 5.283457 CTTCATCAAAGGGGTAGGAGTAG 57.717 47.826 0.00 0.00 0.00 2.57
248 249 2.188817 AGGGGTAGGAGTAGCAACAAG 58.811 52.381 0.00 0.00 0.00 3.16
273 274 2.497675 TGTCTAGATGGTGGCTTCAGTC 59.502 50.000 0.00 0.00 0.00 3.51
277 282 3.618690 AGATGGTGGCTTCAGTCTTAC 57.381 47.619 0.00 0.00 0.00 2.34
345 350 2.751806 TGCATGCATCGTCCAAATACAA 59.248 40.909 18.46 0.00 0.00 2.41
363 370 2.711547 ACAAAGGCTGGGTATATCCTCC 59.288 50.000 3.09 4.77 36.25 4.30
368 375 4.055094 AGGCTGGGTATATCCTCCTTTTT 58.945 43.478 3.09 0.00 36.25 1.94
455 462 8.699749 GCCAAGATGTAAACTCAAAATGTTAAC 58.300 33.333 0.00 0.00 0.00 2.01
473 480 3.564053 AACCCTTGGAAACGAGTAACA 57.436 42.857 0.00 0.00 40.55 2.41
484 491 7.365741 TGGAAACGAGTAACAGTTAGACTAAG 58.634 38.462 0.00 0.00 0.00 2.18
485 492 6.805760 GGAAACGAGTAACAGTTAGACTAAGG 59.194 42.308 0.00 0.00 0.00 2.69
486 493 5.307926 ACGAGTAACAGTTAGACTAAGGC 57.692 43.478 0.00 0.00 0.00 4.35
487 494 5.008980 ACGAGTAACAGTTAGACTAAGGCT 58.991 41.667 0.00 0.00 0.00 4.58
488 495 5.106237 ACGAGTAACAGTTAGACTAAGGCTG 60.106 44.000 10.01 10.01 0.00 4.85
489 496 5.652518 GAGTAACAGTTAGACTAAGGCTGG 58.347 45.833 14.19 0.00 0.00 4.85
490 497 5.085219 AGTAACAGTTAGACTAAGGCTGGT 58.915 41.667 14.19 11.29 0.00 4.00
491 498 4.538746 AACAGTTAGACTAAGGCTGGTC 57.461 45.455 14.19 11.42 33.36 4.02
492 499 3.507411 ACAGTTAGACTAAGGCTGGTCA 58.493 45.455 18.61 6.38 35.56 4.02
493 500 4.097418 ACAGTTAGACTAAGGCTGGTCAT 58.903 43.478 18.61 9.43 35.56 3.06
494 501 5.269991 ACAGTTAGACTAAGGCTGGTCATA 58.730 41.667 18.61 8.71 35.56 2.15
495 502 5.361285 ACAGTTAGACTAAGGCTGGTCATAG 59.639 44.000 18.61 6.22 35.56 2.23
496 503 5.361285 CAGTTAGACTAAGGCTGGTCATAGT 59.639 44.000 18.61 9.07 35.56 2.12
497 504 5.361285 AGTTAGACTAAGGCTGGTCATAGTG 59.639 44.000 18.61 0.00 35.56 2.74
498 505 3.034635 AGACTAAGGCTGGTCATAGTGG 58.965 50.000 18.61 0.00 35.56 4.00
499 506 2.103263 GACTAAGGCTGGTCATAGTGGG 59.897 54.545 13.65 0.00 33.40 4.61
500 507 1.417890 CTAAGGCTGGTCATAGTGGGG 59.582 57.143 0.00 0.00 0.00 4.96
501 508 0.253160 AAGGCTGGTCATAGTGGGGA 60.253 55.000 0.00 0.00 0.00 4.81
502 509 0.692419 AGGCTGGTCATAGTGGGGAG 60.692 60.000 0.00 0.00 0.00 4.30
503 510 0.983378 GGCTGGTCATAGTGGGGAGT 60.983 60.000 0.00 0.00 0.00 3.85
504 511 1.691482 GGCTGGTCATAGTGGGGAGTA 60.691 57.143 0.00 0.00 0.00 2.59
505 512 2.116238 GCTGGTCATAGTGGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
506 513 2.158943 GCTGGTCATAGTGGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
507 514 3.375699 CTGGTCATAGTGGGGAGTAACT 58.624 50.000 0.00 0.00 0.00 2.24
508 515 3.775316 CTGGTCATAGTGGGGAGTAACTT 59.225 47.826 0.00 0.00 0.00 2.66
509 516 4.950361 TGGTCATAGTGGGGAGTAACTTA 58.050 43.478 0.00 0.00 0.00 2.24
510 517 5.535029 TGGTCATAGTGGGGAGTAACTTAT 58.465 41.667 0.00 0.00 0.00 1.73
511 518 6.685541 TGGTCATAGTGGGGAGTAACTTATA 58.314 40.000 0.00 0.00 0.00 0.98
512 519 6.552350 TGGTCATAGTGGGGAGTAACTTATAC 59.448 42.308 0.00 0.00 0.00 1.47
513 520 6.781507 GGTCATAGTGGGGAGTAACTTATACT 59.218 42.308 0.00 0.00 0.00 2.12
514 521 7.946776 GGTCATAGTGGGGAGTAACTTATACTA 59.053 40.741 0.00 0.00 0.00 1.82
515 522 9.012161 GTCATAGTGGGGAGTAACTTATACTAG 57.988 40.741 0.00 0.00 0.00 2.57
516 523 8.730948 TCATAGTGGGGAGTAACTTATACTAGT 58.269 37.037 0.00 0.00 0.00 2.57
517 524 8.794553 CATAGTGGGGAGTAACTTATACTAGTG 58.205 40.741 5.39 0.00 0.00 2.74
518 525 6.739664 AGTGGGGAGTAACTTATACTAGTGT 58.260 40.000 5.39 0.39 0.00 3.55
519 526 6.832900 AGTGGGGAGTAACTTATACTAGTGTC 59.167 42.308 5.39 0.00 0.00 3.67
520 527 6.604795 GTGGGGAGTAACTTATACTAGTGTCA 59.395 42.308 5.39 0.00 0.00 3.58
521 528 7.287235 GTGGGGAGTAACTTATACTAGTGTCAT 59.713 40.741 5.39 0.00 0.00 3.06
522 529 7.287005 TGGGGAGTAACTTATACTAGTGTCATG 59.713 40.741 5.39 0.00 0.00 3.07
523 530 7.146648 GGGAGTAACTTATACTAGTGTCATGC 58.853 42.308 5.39 0.00 0.00 4.06
524 531 7.201884 GGGAGTAACTTATACTAGTGTCATGCA 60.202 40.741 5.39 0.00 0.00 3.96
525 532 8.361139 GGAGTAACTTATACTAGTGTCATGCAT 58.639 37.037 5.39 0.00 0.00 3.96
560 567 9.409918 AGTCTAAGTTACTATCTTCATAGTGCA 57.590 33.333 5.12 0.00 44.33 4.57
591 598 9.983024 AACATACTAGTAGTATCATAGATGGCT 57.017 33.333 18.19 0.49 39.26 4.75
592 599 9.983024 ACATACTAGTAGTATCATAGATGGCTT 57.017 33.333 18.19 0.00 39.26 4.35
596 603 9.540538 ACTAGTAGTATCATAGATGGCTTCATT 57.459 33.333 0.00 0.00 0.00 2.57
606 613 9.288576 TCATAGATGGCTTCATTTATTAGGTTG 57.711 33.333 3.03 0.00 29.11 3.77
607 614 9.071276 CATAGATGGCTTCATTTATTAGGTTGT 57.929 33.333 3.03 0.00 29.11 3.32
609 616 8.682936 AGATGGCTTCATTTATTAGGTTGTAG 57.317 34.615 3.03 0.00 0.00 2.74
610 617 8.494433 AGATGGCTTCATTTATTAGGTTGTAGA 58.506 33.333 3.03 0.00 0.00 2.59
611 618 7.859325 TGGCTTCATTTATTAGGTTGTAGAC 57.141 36.000 0.00 0.00 0.00 2.59
612 619 7.630082 TGGCTTCATTTATTAGGTTGTAGACT 58.370 34.615 0.00 0.00 0.00 3.24
613 620 7.769044 TGGCTTCATTTATTAGGTTGTAGACTC 59.231 37.037 0.00 0.00 0.00 3.36
614 621 7.769044 GGCTTCATTTATTAGGTTGTAGACTCA 59.231 37.037 0.00 0.00 0.00 3.41
615 622 9.331282 GCTTCATTTATTAGGTTGTAGACTCAT 57.669 33.333 0.00 0.00 0.00 2.90
617 624 9.832445 TTCATTTATTAGGTTGTAGACTCATCC 57.168 33.333 0.00 0.00 0.00 3.51
618 625 9.213777 TCATTTATTAGGTTGTAGACTCATCCT 57.786 33.333 8.60 8.60 39.76 3.24
619 626 9.838339 CATTTATTAGGTTGTAGACTCATCCTT 57.162 33.333 8.77 0.00 38.19 3.36
621 628 9.886132 TTTATTAGGTTGTAGACTCATCCTTTC 57.114 33.333 8.77 0.00 38.19 2.62
622 629 4.828072 AGGTTGTAGACTCATCCTTTCC 57.172 45.455 0.00 0.00 34.91 3.13
623 630 3.519913 AGGTTGTAGACTCATCCTTTCCC 59.480 47.826 0.00 0.00 34.91 3.97
624 631 3.522553 GTTGTAGACTCATCCTTTCCCG 58.477 50.000 0.00 0.00 0.00 5.14
625 632 2.108168 TGTAGACTCATCCTTTCCCGG 58.892 52.381 0.00 0.00 0.00 5.73
626 633 1.413077 GTAGACTCATCCTTTCCCGGG 59.587 57.143 16.85 16.85 0.00 5.73
627 634 0.042731 AGACTCATCCTTTCCCGGGA 59.957 55.000 22.63 22.63 37.26 5.14
628 635 0.909623 GACTCATCCTTTCCCGGGAA 59.090 55.000 32.53 32.53 36.37 3.97
629 636 0.912486 ACTCATCCTTTCCCGGGAAG 59.088 55.000 33.64 25.87 36.37 3.46
630 637 0.464554 CTCATCCTTTCCCGGGAAGC 60.465 60.000 33.64 0.00 36.37 3.86
631 638 1.819632 CATCCTTTCCCGGGAAGCG 60.820 63.158 33.64 26.85 36.37 4.68
632 639 3.699134 ATCCTTTCCCGGGAAGCGC 62.699 63.158 33.64 0.00 36.37 5.92
633 640 4.410400 CCTTTCCCGGGAAGCGCT 62.410 66.667 33.64 2.64 35.38 5.92
634 641 2.582436 CTTTCCCGGGAAGCGCTA 59.418 61.111 33.64 19.25 35.38 4.26
635 642 1.146263 CTTTCCCGGGAAGCGCTAT 59.854 57.895 33.64 0.00 35.38 2.97
636 643 0.391597 CTTTCCCGGGAAGCGCTATA 59.608 55.000 33.64 17.79 35.38 1.31
637 644 0.105408 TTTCCCGGGAAGCGCTATAC 59.895 55.000 33.64 5.38 35.38 1.47
638 645 0.757935 TTCCCGGGAAGCGCTATACT 60.758 55.000 32.53 0.00 0.00 2.12
639 646 0.111061 TCCCGGGAAGCGCTATACTA 59.889 55.000 24.50 0.00 0.00 1.82
640 647 0.243095 CCCGGGAAGCGCTATACTAC 59.757 60.000 18.48 0.00 0.00 2.73
641 648 0.956633 CCGGGAAGCGCTATACTACA 59.043 55.000 12.05 0.00 0.00 2.74
642 649 1.068472 CCGGGAAGCGCTATACTACAG 60.068 57.143 12.05 0.00 0.00 2.74
643 650 1.607628 CGGGAAGCGCTATACTACAGT 59.392 52.381 12.05 0.00 0.00 3.55
644 651 2.810274 CGGGAAGCGCTATACTACAGTA 59.190 50.000 12.05 0.00 34.67 2.74
645 652 3.251729 CGGGAAGCGCTATACTACAGTAA 59.748 47.826 12.05 0.00 33.76 2.24
646 653 4.544651 GGGAAGCGCTATACTACAGTAAC 58.455 47.826 12.05 0.00 33.76 2.50
647 654 4.037208 GGGAAGCGCTATACTACAGTAACA 59.963 45.833 12.05 0.00 33.76 2.41
648 655 5.278858 GGGAAGCGCTATACTACAGTAACAT 60.279 44.000 12.05 0.00 33.76 2.71
649 656 6.072286 GGGAAGCGCTATACTACAGTAACATA 60.072 42.308 12.05 0.00 33.76 2.29
650 657 7.362747 GGGAAGCGCTATACTACAGTAACATAT 60.363 40.741 12.05 0.00 33.76 1.78
651 658 8.027771 GGAAGCGCTATACTACAGTAACATATT 58.972 37.037 12.05 0.00 33.76 1.28
676 683 9.702253 TTATGTTACTCTAAACATCTCTCTCCT 57.298 33.333 5.55 0.00 44.79 3.69
677 684 7.633193 TGTTACTCTAAACATCTCTCTCCTC 57.367 40.000 0.00 0.00 34.50 3.71
678 685 7.175797 TGTTACTCTAAACATCTCTCTCCTCA 58.824 38.462 0.00 0.00 34.50 3.86
679 686 7.836685 TGTTACTCTAAACATCTCTCTCCTCAT 59.163 37.037 0.00 0.00 34.50 2.90
680 687 8.691797 GTTACTCTAAACATCTCTCTCCTCATT 58.308 37.037 0.00 0.00 0.00 2.57
681 688 9.922477 TTACTCTAAACATCTCTCTCCTCATTA 57.078 33.333 0.00 0.00 0.00 1.90
682 689 8.830915 ACTCTAAACATCTCTCTCCTCATTAA 57.169 34.615 0.00 0.00 0.00 1.40
683 690 8.691797 ACTCTAAACATCTCTCTCCTCATTAAC 58.308 37.037 0.00 0.00 0.00 2.01
684 691 8.830915 TCTAAACATCTCTCTCCTCATTAACT 57.169 34.615 0.00 0.00 0.00 2.24
685 692 9.922477 TCTAAACATCTCTCTCCTCATTAACTA 57.078 33.333 0.00 0.00 0.00 2.24
686 693 9.959749 CTAAACATCTCTCTCCTCATTAACTAC 57.040 37.037 0.00 0.00 0.00 2.73
687 694 7.962995 AACATCTCTCTCCTCATTAACTACA 57.037 36.000 0.00 0.00 0.00 2.74
688 695 8.546083 AACATCTCTCTCCTCATTAACTACAT 57.454 34.615 0.00 0.00 0.00 2.29
689 696 7.950512 ACATCTCTCTCCTCATTAACTACATG 58.049 38.462 0.00 0.00 0.00 3.21
690 697 6.398234 TCTCTCTCCTCATTAACTACATGC 57.602 41.667 0.00 0.00 0.00 4.06
691 698 5.303078 TCTCTCTCCTCATTAACTACATGCC 59.697 44.000 0.00 0.00 0.00 4.40
692 699 4.962362 TCTCTCCTCATTAACTACATGCCA 59.038 41.667 0.00 0.00 0.00 4.92
693 700 5.023533 TCTCCTCATTAACTACATGCCAC 57.976 43.478 0.00 0.00 0.00 5.01
694 701 4.469586 TCTCCTCATTAACTACATGCCACA 59.530 41.667 0.00 0.00 0.00 4.17
695 702 5.130975 TCTCCTCATTAACTACATGCCACAT 59.869 40.000 0.00 0.00 0.00 3.21
696 703 6.326323 TCTCCTCATTAACTACATGCCACATA 59.674 38.462 0.00 0.00 0.00 2.29
697 704 6.894682 TCCTCATTAACTACATGCCACATAA 58.105 36.000 0.00 0.00 0.00 1.90
698 705 7.342581 TCCTCATTAACTACATGCCACATAAA 58.657 34.615 0.00 0.00 0.00 1.40
699 706 7.282224 TCCTCATTAACTACATGCCACATAAAC 59.718 37.037 0.00 0.00 0.00 2.01
700 707 7.066887 CCTCATTAACTACATGCCACATAAACA 59.933 37.037 0.00 0.00 0.00 2.83
701 708 8.341892 TCATTAACTACATGCCACATAAACAA 57.658 30.769 0.00 0.00 0.00 2.83
702 709 8.797438 TCATTAACTACATGCCACATAAACAAA 58.203 29.630 0.00 0.00 0.00 2.83
703 710 9.416794 CATTAACTACATGCCACATAAACAAAA 57.583 29.630 0.00 0.00 0.00 2.44
704 711 9.988815 ATTAACTACATGCCACATAAACAAAAA 57.011 25.926 0.00 0.00 0.00 1.94
705 712 9.988815 TTAACTACATGCCACATAAACAAAAAT 57.011 25.926 0.00 0.00 0.00 1.82
706 713 8.900983 AACTACATGCCACATAAACAAAAATT 57.099 26.923 0.00 0.00 0.00 1.82
707 714 8.900983 ACTACATGCCACATAAACAAAAATTT 57.099 26.923 0.00 0.00 0.00 1.82
708 715 8.987890 ACTACATGCCACATAAACAAAAATTTC 58.012 29.630 0.00 0.00 0.00 2.17
709 716 9.206870 CTACATGCCACATAAACAAAAATTTCT 57.793 29.630 0.00 0.00 0.00 2.52
710 717 8.449251 ACATGCCACATAAACAAAAATTTCTT 57.551 26.923 0.00 0.00 0.00 2.52
711 718 8.344098 ACATGCCACATAAACAAAAATTTCTTG 58.656 29.630 0.00 9.92 0.00 3.02
712 719 8.557864 CATGCCACATAAACAAAAATTTCTTGA 58.442 29.630 15.45 0.54 0.00 3.02
713 720 8.498054 TGCCACATAAACAAAAATTTCTTGAA 57.502 26.923 15.45 5.65 0.00 2.69
714 721 8.950210 TGCCACATAAACAAAAATTTCTTGAAA 58.050 25.926 15.45 0.00 0.00 2.69
715 722 9.949174 GCCACATAAACAAAAATTTCTTGAAAT 57.051 25.926 15.45 3.04 0.00 2.17
718 725 9.649024 ACATAAACAAAAATTTCTTGAAATGCG 57.351 25.926 15.45 2.41 0.00 4.73
719 726 8.620641 CATAAACAAAAATTTCTTGAAATGCGC 58.379 29.630 0.00 0.00 0.00 6.09
720 727 5.989551 ACAAAAATTTCTTGAAATGCGCT 57.010 30.435 9.73 0.00 0.00 5.92
721 728 7.475771 AACAAAAATTTCTTGAAATGCGCTA 57.524 28.000 9.73 0.00 0.00 4.26
722 729 7.656707 ACAAAAATTTCTTGAAATGCGCTAT 57.343 28.000 9.73 0.00 0.00 2.97
723 730 7.512297 ACAAAAATTTCTTGAAATGCGCTATG 58.488 30.769 9.73 6.32 0.00 2.23
724 731 7.171337 ACAAAAATTTCTTGAAATGCGCTATGT 59.829 29.630 9.73 0.00 0.00 2.29
725 732 7.656707 AAAATTTCTTGAAATGCGCTATGTT 57.343 28.000 9.73 0.00 0.00 2.71
726 733 8.755696 AAAATTTCTTGAAATGCGCTATGTTA 57.244 26.923 9.73 0.00 0.00 2.41
727 734 8.931385 AAATTTCTTGAAATGCGCTATGTTAT 57.069 26.923 9.73 0.00 0.00 1.89
728 735 8.931385 AATTTCTTGAAATGCGCTATGTTATT 57.069 26.923 9.73 0.00 0.00 1.40
731 738 9.663904 TTTCTTGAAATGCGCTATGTTATTATC 57.336 29.630 9.73 0.87 0.00 1.75
732 739 8.607441 TCTTGAAATGCGCTATGTTATTATCT 57.393 30.769 9.73 0.00 0.00 1.98
733 740 9.705290 TCTTGAAATGCGCTATGTTATTATCTA 57.295 29.630 9.73 0.00 0.00 1.98
736 743 9.489084 TGAAATGCGCTATGTTATTATCTAAGT 57.511 29.630 9.73 0.00 0.00 2.24
741 748 9.622004 TGCGCTATGTTATTATCTAAGTTACTC 57.378 33.333 9.73 0.00 0.00 2.59
742 749 9.074443 GCGCTATGTTATTATCTAAGTTACTCC 57.926 37.037 0.00 0.00 0.00 3.85
743 750 9.570488 CGCTATGTTATTATCTAAGTTACTCCC 57.430 37.037 0.00 0.00 0.00 4.30
755 762 9.884814 ATCTAAGTTACTCCCATTATGACTAGT 57.115 33.333 0.00 0.00 0.00 2.57
756 763 9.352191 TCTAAGTTACTCCCATTATGACTAGTC 57.648 37.037 16.32 16.32 0.00 2.59
757 764 9.357161 CTAAGTTACTCCCATTATGACTAGTCT 57.643 37.037 23.01 11.45 0.00 3.24
759 766 9.710818 AAGTTACTCCCATTATGACTAGTCTAA 57.289 33.333 23.01 17.52 0.00 2.10
780 787 8.996271 GTCTAACATAAATATTTTAGGGGGACG 58.004 37.037 5.91 0.00 30.64 4.79
870 878 0.681175 CAGGCCCCAAAAGAAACTGG 59.319 55.000 0.00 0.00 0.00 4.00
874 882 2.371841 GGCCCCAAAAGAAACTGGAAAT 59.628 45.455 0.00 0.00 34.35 2.17
875 883 3.580895 GGCCCCAAAAGAAACTGGAAATA 59.419 43.478 0.00 0.00 34.35 1.40
876 884 4.225042 GGCCCCAAAAGAAACTGGAAATAT 59.775 41.667 0.00 0.00 34.35 1.28
877 885 5.280470 GGCCCCAAAAGAAACTGGAAATATT 60.280 40.000 0.00 0.00 34.35 1.28
878 886 6.237901 GCCCCAAAAGAAACTGGAAATATTT 58.762 36.000 0.00 0.00 34.35 1.40
879 887 6.149308 GCCCCAAAAGAAACTGGAAATATTTG 59.851 38.462 5.17 0.00 34.35 2.32
881 889 7.387673 CCCCAAAAGAAACTGGAAATATTTGTC 59.612 37.037 5.17 0.00 34.35 3.18
884 925 8.981647 CAAAAGAAACTGGAAATATTTGTCAGG 58.018 33.333 22.03 11.22 0.00 3.86
893 934 4.900635 AATATTTGTCAGGCCATCGAAC 57.099 40.909 5.01 0.00 0.00 3.95
916 957 2.356382 AGCCGTAGAAGAAGAGATGTCG 59.644 50.000 0.00 0.00 0.00 4.35
917 958 2.097791 GCCGTAGAAGAAGAGATGTCGT 59.902 50.000 0.00 0.00 0.00 4.34
918 959 3.789459 GCCGTAGAAGAAGAGATGTCGTC 60.789 52.174 0.00 0.00 0.00 4.20
930 971 1.812571 GATGTCGTCCATTTGCCTGTT 59.187 47.619 0.00 0.00 32.56 3.16
940 981 5.048083 GTCCATTTGCCTGTTAGTGAATCAA 60.048 40.000 0.00 0.00 0.00 2.57
941 982 5.183713 TCCATTTGCCTGTTAGTGAATCAAG 59.816 40.000 0.00 0.00 0.00 3.02
944 985 6.707440 TTTGCCTGTTAGTGAATCAAGAAA 57.293 33.333 0.00 0.00 0.00 2.52
955 996 5.305386 AGTGAATCAAGAAAGGGGGAAAAAG 59.695 40.000 0.00 0.00 0.00 2.27
1086 1151 2.600729 CCTTCTCCCCACTGCTGCT 61.601 63.158 0.00 0.00 0.00 4.24
1137 1202 1.215382 CTTCCGCCGTCTCATCACA 59.785 57.895 0.00 0.00 0.00 3.58
1581 1676 4.581824 CCTTTATCATTCAGGGTCATGTGG 59.418 45.833 0.00 0.00 0.00 4.17
1855 1994 3.369756 TCAGTGTGACGACTTTGTTGTTC 59.630 43.478 0.00 0.00 29.24 3.18
1857 1996 3.370978 AGTGTGACGACTTTGTTGTTCTG 59.629 43.478 0.00 0.00 29.24 3.02
1921 2066 1.983481 GGGCACAACCATGATGGCA 60.983 57.895 12.25 0.00 42.67 4.92
1940 2085 2.802057 GCACATACCGGCTCGAGTATTT 60.802 50.000 15.13 0.00 0.00 1.40
1964 2109 2.972625 TCTGAGAAATAACCAGTGGCG 58.027 47.619 9.78 0.00 0.00 5.69
2081 2226 7.829211 CCCATCTTTACAAGAGAATCCAGTTTA 59.171 37.037 0.00 0.00 41.61 2.01
2115 2266 4.256920 ACATCAAGACATTGCAGGTAGAC 58.743 43.478 0.00 0.00 36.30 2.59
2629 3009 9.626045 GAATTTAGTAGAACTGTTGATTTTGGG 57.374 33.333 0.00 0.00 0.00 4.12
2651 3031 1.800586 TGTTTGTCGATTCTCTGCTGC 59.199 47.619 0.00 0.00 0.00 5.25
2657 3037 1.220169 CGATTCTCTGCTGCCGATGG 61.220 60.000 0.00 0.00 0.00 3.51
2766 3146 9.334693 GACAGCAAGACATAAAAGATAAAACAG 57.665 33.333 0.00 0.00 0.00 3.16
2913 3333 2.640184 CTCTTGCATCTTCCATGAGCA 58.360 47.619 0.00 0.00 30.86 4.26
2943 3363 6.528072 GCCTTGTTTCCTTCTTGAATAAATCG 59.472 38.462 0.00 0.00 0.00 3.34
2946 3366 7.519032 TGTTTCCTTCTTGAATAAATCGGTT 57.481 32.000 0.00 0.00 0.00 4.44
2953 3373 6.817270 TCTTGAATAAATCGGTTAGCGTAC 57.183 37.500 3.21 0.00 0.00 3.67
3046 3469 1.434622 GCCATGTGCTCATCAGGACG 61.435 60.000 8.82 0.00 43.86 4.79
3135 3558 3.808728 TGTTACTGGGCAATGAGATAGC 58.191 45.455 0.00 0.00 0.00 2.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.127533 GCCACCACGATGCCAGAC 61.128 66.667 0.00 0.00 0.00 3.51
1 2 4.758251 CGCCACCACGATGCCAGA 62.758 66.667 0.00 0.00 34.06 3.86
6 7 3.179265 GTCGACGCCACCACGATG 61.179 66.667 0.00 0.00 38.27 3.84
26 27 3.335356 ATCGACCTTGCCTGGCCTG 62.335 63.158 17.53 2.54 0.00 4.85
27 28 3.011517 ATCGACCTTGCCTGGCCT 61.012 61.111 17.53 0.00 0.00 5.19
28 29 2.825836 CATCGACCTTGCCTGGCC 60.826 66.667 17.53 0.00 0.00 5.36
29 30 3.512516 GCATCGACCTTGCCTGGC 61.513 66.667 12.87 12.87 33.95 4.85
30 31 3.197790 CGCATCGACCTTGCCTGG 61.198 66.667 4.00 0.00 36.75 4.45
31 32 2.434884 ACGCATCGACCTTGCCTG 60.435 61.111 4.00 0.00 36.75 4.85
32 33 2.125512 GACGCATCGACCTTGCCT 60.126 61.111 4.00 0.00 36.75 4.75
33 34 2.434185 TGACGCATCGACCTTGCC 60.434 61.111 4.00 0.00 36.75 4.52
34 35 1.291877 AACTGACGCATCGACCTTGC 61.292 55.000 0.00 0.00 36.74 4.01
35 36 0.716108 GAACTGACGCATCGACCTTG 59.284 55.000 0.00 0.00 0.00 3.61
36 37 0.389948 GGAACTGACGCATCGACCTT 60.390 55.000 0.00 0.00 0.00 3.50
37 38 1.215647 GGAACTGACGCATCGACCT 59.784 57.895 0.00 0.00 0.00 3.85
38 39 1.215647 AGGAACTGACGCATCGACC 59.784 57.895 0.00 0.00 37.18 4.79
39 40 4.891566 AGGAACTGACGCATCGAC 57.108 55.556 0.00 0.00 37.18 4.20
50 51 1.110442 CCATCTCGAGAGCAGGAACT 58.890 55.000 21.52 0.00 43.88 3.01
51 52 1.107114 TCCATCTCGAGAGCAGGAAC 58.893 55.000 23.88 0.00 31.37 3.62
52 53 1.107114 GTCCATCTCGAGAGCAGGAA 58.893 55.000 26.29 13.83 34.50 3.36
53 54 0.753479 GGTCCATCTCGAGAGCAGGA 60.753 60.000 22.85 22.85 0.00 3.86
54 55 1.739049 GGTCCATCTCGAGAGCAGG 59.261 63.158 21.52 20.52 0.00 4.85
55 56 1.358402 CGGTCCATCTCGAGAGCAG 59.642 63.158 21.52 12.65 0.00 4.24
56 57 2.121538 CCGGTCCATCTCGAGAGCA 61.122 63.158 21.52 3.93 0.00 4.26
57 58 2.122167 ACCGGTCCATCTCGAGAGC 61.122 63.158 21.52 10.40 0.00 4.09
58 59 0.748367 TCACCGGTCCATCTCGAGAG 60.748 60.000 21.52 12.37 0.00 3.20
59 60 0.323087 TTCACCGGTCCATCTCGAGA 60.323 55.000 19.19 19.19 0.00 4.04
60 61 0.530744 TTTCACCGGTCCATCTCGAG 59.469 55.000 2.59 5.93 0.00 4.04
61 62 0.530744 CTTTCACCGGTCCATCTCGA 59.469 55.000 2.59 0.00 0.00 4.04
62 63 0.530744 TCTTTCACCGGTCCATCTCG 59.469 55.000 2.59 0.00 0.00 4.04
63 64 2.555199 CATCTTTCACCGGTCCATCTC 58.445 52.381 2.59 0.00 0.00 2.75
64 65 1.210478 CCATCTTTCACCGGTCCATCT 59.790 52.381 2.59 0.00 0.00 2.90
65 66 1.668419 CCATCTTTCACCGGTCCATC 58.332 55.000 2.59 0.00 0.00 3.51
66 67 0.394352 GCCATCTTTCACCGGTCCAT 60.394 55.000 2.59 0.00 0.00 3.41
67 68 1.002624 GCCATCTTTCACCGGTCCA 60.003 57.895 2.59 0.00 0.00 4.02
68 69 2.106683 CGCCATCTTTCACCGGTCC 61.107 63.158 2.59 0.00 0.00 4.46
69 70 2.106683 CCGCCATCTTTCACCGGTC 61.107 63.158 2.59 0.00 34.56 4.79
70 71 2.046314 CCGCCATCTTTCACCGGT 60.046 61.111 0.00 0.00 34.56 5.28
71 72 3.508840 GCCGCCATCTTTCACCGG 61.509 66.667 0.00 0.00 41.72 5.28
72 73 3.864686 CGCCGCCATCTTTCACCG 61.865 66.667 0.00 0.00 0.00 4.94
73 74 3.508840 CCGCCGCCATCTTTCACC 61.509 66.667 0.00 0.00 0.00 4.02
74 75 4.179579 GCCGCCGCCATCTTTCAC 62.180 66.667 0.00 0.00 0.00 3.18
75 76 4.713735 TGCCGCCGCCATCTTTCA 62.714 61.111 0.00 0.00 0.00 2.69
76 77 3.439540 TTGCCGCCGCCATCTTTC 61.440 61.111 0.00 0.00 0.00 2.62
77 78 3.747976 GTTGCCGCCGCCATCTTT 61.748 61.111 0.00 0.00 0.00 2.52
85 86 3.997064 CTCTCAGAGGTTGCCGCCG 62.997 68.421 0.00 0.00 0.00 6.46
86 87 2.125350 CTCTCAGAGGTTGCCGCC 60.125 66.667 0.00 0.00 0.00 6.13
87 88 1.739562 CACTCTCAGAGGTTGCCGC 60.740 63.158 6.64 0.00 33.35 6.53
88 89 1.739562 GCACTCTCAGAGGTTGCCG 60.740 63.158 6.64 0.00 33.35 5.69
89 90 1.739562 CGCACTCTCAGAGGTTGCC 60.740 63.158 6.64 0.00 30.96 4.52
90 91 2.386660 GCGCACTCTCAGAGGTTGC 61.387 63.158 6.64 6.92 33.35 4.17
91 92 1.739562 GGCGCACTCTCAGAGGTTG 60.740 63.158 10.83 0.00 33.35 3.77
92 93 2.659610 GGCGCACTCTCAGAGGTT 59.340 61.111 10.83 0.00 33.35 3.50
93 94 3.753434 CGGCGCACTCTCAGAGGT 61.753 66.667 10.83 0.00 33.35 3.85
94 95 4.504916 CCGGCGCACTCTCAGAGG 62.505 72.222 10.83 0.00 33.35 3.69
95 96 3.691744 GACCGGCGCACTCTCAGAG 62.692 68.421 10.83 0.00 35.52 3.35
96 97 3.749064 GACCGGCGCACTCTCAGA 61.749 66.667 10.83 0.00 0.00 3.27
97 98 3.753434 AGACCGGCGCACTCTCAG 61.753 66.667 10.83 0.00 0.00 3.35
98 99 4.056125 CAGACCGGCGCACTCTCA 62.056 66.667 10.83 0.00 0.00 3.27
99 100 4.803426 CCAGACCGGCGCACTCTC 62.803 72.222 10.83 0.00 0.00 3.20
106 107 4.293648 TCACACACCAGACCGGCG 62.294 66.667 0.00 0.00 39.03 6.46
107 108 2.665185 GTCACACACCAGACCGGC 60.665 66.667 0.00 0.00 39.03 6.13
108 109 2.030562 GGTCACACACCAGACCGG 59.969 66.667 0.00 0.00 45.98 5.28
115 116 1.071471 CAGGACTGGGTCACACACC 59.929 63.158 0.14 0.00 45.97 4.16
116 117 1.071471 CCAGGACTGGGTCACACAC 59.929 63.158 10.55 0.00 46.81 3.82
117 118 3.562250 CCAGGACTGGGTCACACA 58.438 61.111 10.55 0.00 46.81 3.72
126 127 0.107508 CCAGCCACATACCAGGACTG 60.108 60.000 0.00 0.00 0.00 3.51
127 128 1.274703 CCCAGCCACATACCAGGACT 61.275 60.000 0.00 0.00 0.00 3.85
128 129 1.224592 CCCAGCCACATACCAGGAC 59.775 63.158 0.00 0.00 0.00 3.85
129 130 2.679342 GCCCAGCCACATACCAGGA 61.679 63.158 0.00 0.00 0.00 3.86
130 131 2.124151 GCCCAGCCACATACCAGG 60.124 66.667 0.00 0.00 0.00 4.45
131 132 1.452651 CAGCCCAGCCACATACCAG 60.453 63.158 0.00 0.00 0.00 4.00
132 133 2.676608 CAGCCCAGCCACATACCA 59.323 61.111 0.00 0.00 0.00 3.25
133 134 2.124151 CCAGCCCAGCCACATACC 60.124 66.667 0.00 0.00 0.00 2.73
134 135 2.124151 CCCAGCCCAGCCACATAC 60.124 66.667 0.00 0.00 0.00 2.39
135 136 3.419580 CCCCAGCCCAGCCACATA 61.420 66.667 0.00 0.00 0.00 2.29
145 146 2.265467 TAAAGTCGGATGCCCCAGCC 62.265 60.000 0.00 0.00 38.69 4.85
146 147 0.815615 CTAAAGTCGGATGCCCCAGC 60.816 60.000 0.00 0.00 40.48 4.85
147 148 0.830648 TCTAAAGTCGGATGCCCCAG 59.169 55.000 0.00 0.00 34.14 4.45
148 149 1.140852 CATCTAAAGTCGGATGCCCCA 59.859 52.381 0.00 0.00 33.98 4.96
149 150 1.141053 ACATCTAAAGTCGGATGCCCC 59.859 52.381 0.00 0.00 41.93 5.80
150 151 2.622064 ACATCTAAAGTCGGATGCCC 57.378 50.000 0.00 0.00 41.93 5.36
151 152 4.745620 GTCTAACATCTAAAGTCGGATGCC 59.254 45.833 0.00 0.00 41.93 4.40
152 153 5.593010 AGTCTAACATCTAAAGTCGGATGC 58.407 41.667 0.00 0.00 41.93 3.91
153 154 7.863375 CCTAAGTCTAACATCTAAAGTCGGATG 59.137 40.741 0.00 0.00 43.30 3.51
154 155 7.560626 ACCTAAGTCTAACATCTAAAGTCGGAT 59.439 37.037 0.00 0.00 0.00 4.18
155 156 6.888632 ACCTAAGTCTAACATCTAAAGTCGGA 59.111 38.462 0.00 0.00 0.00 4.55
156 157 6.973474 CACCTAAGTCTAACATCTAAAGTCGG 59.027 42.308 0.00 0.00 0.00 4.79
157 158 6.472808 GCACCTAAGTCTAACATCTAAAGTCG 59.527 42.308 0.00 0.00 0.00 4.18
158 159 6.472808 CGCACCTAAGTCTAACATCTAAAGTC 59.527 42.308 0.00 0.00 0.00 3.01
159 160 6.152323 TCGCACCTAAGTCTAACATCTAAAGT 59.848 38.462 0.00 0.00 0.00 2.66
160 161 6.561614 TCGCACCTAAGTCTAACATCTAAAG 58.438 40.000 0.00 0.00 0.00 1.85
161 162 6.519679 TCGCACCTAAGTCTAACATCTAAA 57.480 37.500 0.00 0.00 0.00 1.85
162 163 6.096423 ACATCGCACCTAAGTCTAACATCTAA 59.904 38.462 0.00 0.00 0.00 2.10
163 164 5.593095 ACATCGCACCTAAGTCTAACATCTA 59.407 40.000 0.00 0.00 0.00 1.98
164 165 4.402793 ACATCGCACCTAAGTCTAACATCT 59.597 41.667 0.00 0.00 0.00 2.90
165 166 4.683832 ACATCGCACCTAAGTCTAACATC 58.316 43.478 0.00 0.00 0.00 3.06
166 167 4.402793 AGACATCGCACCTAAGTCTAACAT 59.597 41.667 0.00 0.00 37.75 2.71
167 168 3.762288 AGACATCGCACCTAAGTCTAACA 59.238 43.478 0.00 0.00 37.75 2.41
168 169 4.373348 AGACATCGCACCTAAGTCTAAC 57.627 45.455 0.00 0.00 37.75 2.34
169 170 6.710597 AATAGACATCGCACCTAAGTCTAA 57.289 37.500 0.00 0.00 42.86 2.10
170 171 6.710597 AAATAGACATCGCACCTAAGTCTA 57.289 37.500 0.00 0.00 43.49 2.59
171 172 5.599999 AAATAGACATCGCACCTAAGTCT 57.400 39.130 0.00 0.00 41.88 3.24
172 173 7.948278 ATTAAATAGACATCGCACCTAAGTC 57.052 36.000 0.00 0.00 0.00 3.01
173 174 8.612619 CAAATTAAATAGACATCGCACCTAAGT 58.387 33.333 0.00 0.00 0.00 2.24
174 175 8.070171 CCAAATTAAATAGACATCGCACCTAAG 58.930 37.037 0.00 0.00 0.00 2.18
175 176 7.468084 GCCAAATTAAATAGACATCGCACCTAA 60.468 37.037 0.00 0.00 0.00 2.69
176 177 6.017440 GCCAAATTAAATAGACATCGCACCTA 60.017 38.462 0.00 0.00 0.00 3.08
177 178 5.221048 GCCAAATTAAATAGACATCGCACCT 60.221 40.000 0.00 0.00 0.00 4.00
178 179 4.976116 GCCAAATTAAATAGACATCGCACC 59.024 41.667 0.00 0.00 0.00 5.01
179 180 5.821204 AGCCAAATTAAATAGACATCGCAC 58.179 37.500 0.00 0.00 0.00 5.34
180 181 5.277297 CGAGCCAAATTAAATAGACATCGCA 60.277 40.000 0.00 0.00 0.00 5.10
181 182 5.140177 CGAGCCAAATTAAATAGACATCGC 58.860 41.667 0.00 0.00 0.00 4.58
182 183 5.465390 TCCGAGCCAAATTAAATAGACATCG 59.535 40.000 0.00 0.00 0.00 3.84
183 184 6.260050 TGTCCGAGCCAAATTAAATAGACATC 59.740 38.462 0.00 0.00 0.00 3.06
184 185 6.119536 TGTCCGAGCCAAATTAAATAGACAT 58.880 36.000 0.00 0.00 0.00 3.06
185 186 5.492895 TGTCCGAGCCAAATTAAATAGACA 58.507 37.500 0.00 0.00 0.00 3.41
186 187 6.619801 ATGTCCGAGCCAAATTAAATAGAC 57.380 37.500 0.00 0.00 0.00 2.59
187 188 6.018262 CGAATGTCCGAGCCAAATTAAATAGA 60.018 38.462 0.00 0.00 0.00 1.98
188 189 6.136071 CGAATGTCCGAGCCAAATTAAATAG 58.864 40.000 0.00 0.00 0.00 1.73
189 190 5.008217 CCGAATGTCCGAGCCAAATTAAATA 59.992 40.000 0.00 0.00 0.00 1.40
190 191 4.202010 CCGAATGTCCGAGCCAAATTAAAT 60.202 41.667 0.00 0.00 0.00 1.40
191 192 3.127895 CCGAATGTCCGAGCCAAATTAAA 59.872 43.478 0.00 0.00 0.00 1.52
192 193 2.680841 CCGAATGTCCGAGCCAAATTAA 59.319 45.455 0.00 0.00 0.00 1.40
193 194 2.285083 CCGAATGTCCGAGCCAAATTA 58.715 47.619 0.00 0.00 0.00 1.40
194 195 1.094785 CCGAATGTCCGAGCCAAATT 58.905 50.000 0.00 0.00 0.00 1.82
195 196 1.376609 GCCGAATGTCCGAGCCAAAT 61.377 55.000 0.00 0.00 0.00 2.32
196 197 2.038269 GCCGAATGTCCGAGCCAAA 61.038 57.895 0.00 0.00 0.00 3.28
197 198 2.435938 GCCGAATGTCCGAGCCAA 60.436 61.111 0.00 0.00 0.00 4.52
198 199 3.700970 TGCCGAATGTCCGAGCCA 61.701 61.111 0.00 0.00 0.00 4.75
199 200 3.195698 GTGCCGAATGTCCGAGCC 61.196 66.667 0.00 0.00 0.00 4.70
200 201 3.195698 GGTGCCGAATGTCCGAGC 61.196 66.667 0.00 0.00 0.00 5.03
201 202 2.511600 GGGTGCCGAATGTCCGAG 60.512 66.667 0.00 0.00 0.00 4.63
202 203 4.090588 GGGGTGCCGAATGTCCGA 62.091 66.667 0.00 0.00 0.00 4.55
203 204 3.622060 AAGGGGTGCCGAATGTCCG 62.622 63.158 0.00 0.00 0.00 4.79
204 205 1.749258 GAAGGGGTGCCGAATGTCC 60.749 63.158 0.00 0.00 0.00 4.02
205 206 0.394352 ATGAAGGGGTGCCGAATGTC 60.394 55.000 0.00 0.00 0.00 3.06
206 207 0.394352 GATGAAGGGGTGCCGAATGT 60.394 55.000 0.00 0.00 0.00 2.71
207 208 0.394216 TGATGAAGGGGTGCCGAATG 60.394 55.000 0.00 0.00 0.00 2.67
208 209 0.331278 TTGATGAAGGGGTGCCGAAT 59.669 50.000 0.00 0.00 0.00 3.34
209 210 0.111446 TTTGATGAAGGGGTGCCGAA 59.889 50.000 0.00 0.00 0.00 4.30
210 211 0.322456 CTTTGATGAAGGGGTGCCGA 60.322 55.000 0.00 0.00 0.00 5.54
211 212 2.183409 CTTTGATGAAGGGGTGCCG 58.817 57.895 0.00 0.00 0.00 5.69
219 220 4.443598 GCTACTCCTACCCCTTTGATGAAG 60.444 50.000 0.00 0.00 35.02 3.02
220 221 3.454812 GCTACTCCTACCCCTTTGATGAA 59.545 47.826 0.00 0.00 0.00 2.57
221 222 3.039011 GCTACTCCTACCCCTTTGATGA 58.961 50.000 0.00 0.00 0.00 2.92
222 223 2.771943 TGCTACTCCTACCCCTTTGATG 59.228 50.000 0.00 0.00 0.00 3.07
223 224 3.130734 TGCTACTCCTACCCCTTTGAT 57.869 47.619 0.00 0.00 0.00 2.57
224 225 2.570302 GTTGCTACTCCTACCCCTTTGA 59.430 50.000 0.00 0.00 0.00 2.69
225 226 2.304761 TGTTGCTACTCCTACCCCTTTG 59.695 50.000 0.00 0.00 0.00 2.77
226 227 2.627933 TGTTGCTACTCCTACCCCTTT 58.372 47.619 0.00 0.00 0.00 3.11
227 228 2.337359 TGTTGCTACTCCTACCCCTT 57.663 50.000 0.00 0.00 0.00 3.95
228 229 2.188817 CTTGTTGCTACTCCTACCCCT 58.811 52.381 0.00 0.00 0.00 4.79
229 230 1.907255 ACTTGTTGCTACTCCTACCCC 59.093 52.381 0.00 0.00 0.00 4.95
230 231 2.302157 ACACTTGTTGCTACTCCTACCC 59.698 50.000 0.00 0.00 0.00 3.69
248 249 2.770164 AGCCACCATCTAGACAACAC 57.230 50.000 0.00 0.00 0.00 3.32
305 310 8.991026 TGCATGCAGCCATTTTATTAATTATTC 58.009 29.630 18.46 0.00 44.83 1.75
345 350 3.368921 AAGGAGGATATACCCAGCCTT 57.631 47.619 4.79 4.79 39.05 4.35
402 409 6.821665 AGGAGCATAGCTTTCGTTGTTAATAA 59.178 34.615 0.00 0.00 39.88 1.40
455 462 3.121738 ACTGTTACTCGTTTCCAAGGG 57.878 47.619 0.00 0.00 0.00 3.95
473 480 5.361285 CACTATGACCAGCCTTAGTCTAACT 59.639 44.000 0.00 0.00 34.02 2.24
484 491 0.983378 ACTCCCCACTATGACCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
485 492 1.789523 TACTCCCCACTATGACCAGC 58.210 55.000 0.00 0.00 0.00 4.85
486 493 3.375699 AGTTACTCCCCACTATGACCAG 58.624 50.000 0.00 0.00 0.00 4.00
487 494 3.484953 AGTTACTCCCCACTATGACCA 57.515 47.619 0.00 0.00 0.00 4.02
488 495 6.781507 AGTATAAGTTACTCCCCACTATGACC 59.218 42.308 0.00 0.00 0.00 4.02
489 496 7.836479 AGTATAAGTTACTCCCCACTATGAC 57.164 40.000 0.00 0.00 0.00 3.06
490 497 8.730948 ACTAGTATAAGTTACTCCCCACTATGA 58.269 37.037 0.00 0.00 0.00 2.15
491 498 8.794553 CACTAGTATAAGTTACTCCCCACTATG 58.205 40.741 0.00 0.00 0.00 2.23
492 499 8.509441 ACACTAGTATAAGTTACTCCCCACTAT 58.491 37.037 0.00 0.00 0.00 2.12
493 500 7.876371 ACACTAGTATAAGTTACTCCCCACTA 58.124 38.462 0.00 0.00 0.00 2.74
494 501 6.739664 ACACTAGTATAAGTTACTCCCCACT 58.260 40.000 0.00 0.00 0.00 4.00
495 502 6.604795 TGACACTAGTATAAGTTACTCCCCAC 59.395 42.308 0.00 0.00 0.00 4.61
496 503 6.734532 TGACACTAGTATAAGTTACTCCCCA 58.265 40.000 0.00 0.00 0.00 4.96
497 504 7.659186 CATGACACTAGTATAAGTTACTCCCC 58.341 42.308 0.00 0.00 0.00 4.81
498 505 7.146648 GCATGACACTAGTATAAGTTACTCCC 58.853 42.308 0.00 0.00 0.00 4.30
499 506 7.713750 TGCATGACACTAGTATAAGTTACTCC 58.286 38.462 0.00 0.00 0.00 3.85
534 541 9.409918 TGCACTATGAAGATAGTAACTTAGACT 57.590 33.333 0.00 0.00 42.55 3.24
565 572 9.983024 AGCCATCTATGATACTACTAGTATGTT 57.017 33.333 12.66 3.88 41.21 2.71
566 573 9.983024 AAGCCATCTATGATACTACTAGTATGT 57.017 33.333 12.66 6.64 41.21 2.29
570 577 9.540538 AATGAAGCCATCTATGATACTACTAGT 57.459 33.333 0.00 0.00 31.40 2.57
580 587 9.288576 CAACCTAATAAATGAAGCCATCTATGA 57.711 33.333 0.00 0.00 31.40 2.15
581 588 9.071276 ACAACCTAATAAATGAAGCCATCTATG 57.929 33.333 0.00 0.00 31.40 2.23
583 590 9.778741 CTACAACCTAATAAATGAAGCCATCTA 57.221 33.333 0.00 0.00 31.40 1.98
584 591 8.494433 TCTACAACCTAATAAATGAAGCCATCT 58.506 33.333 0.00 0.00 31.40 2.90
585 592 8.560374 GTCTACAACCTAATAAATGAAGCCATC 58.440 37.037 0.00 0.00 31.40 3.51
586 593 8.275040 AGTCTACAACCTAATAAATGAAGCCAT 58.725 33.333 0.00 0.00 33.66 4.40
587 594 7.630082 AGTCTACAACCTAATAAATGAAGCCA 58.370 34.615 0.00 0.00 0.00 4.75
588 595 7.769044 TGAGTCTACAACCTAATAAATGAAGCC 59.231 37.037 0.00 0.00 0.00 4.35
589 596 8.718102 TGAGTCTACAACCTAATAAATGAAGC 57.282 34.615 0.00 0.00 0.00 3.86
591 598 9.832445 GGATGAGTCTACAACCTAATAAATGAA 57.168 33.333 0.00 0.00 31.45 2.57
592 599 9.213777 AGGATGAGTCTACAACCTAATAAATGA 57.786 33.333 0.00 0.00 40.40 2.57
593 600 9.838339 AAGGATGAGTCTACAACCTAATAAATG 57.162 33.333 0.00 0.00 41.11 2.32
595 602 9.886132 GAAAGGATGAGTCTACAACCTAATAAA 57.114 33.333 0.00 0.00 41.11 1.40
596 603 8.483758 GGAAAGGATGAGTCTACAACCTAATAA 58.516 37.037 0.00 0.00 41.11 1.40
597 604 7.070821 GGGAAAGGATGAGTCTACAACCTAATA 59.929 40.741 0.00 0.00 41.11 0.98
598 605 6.126739 GGGAAAGGATGAGTCTACAACCTAAT 60.127 42.308 0.00 0.00 41.11 1.73
599 606 5.189145 GGGAAAGGATGAGTCTACAACCTAA 59.811 44.000 0.00 0.00 41.11 2.69
600 607 4.715297 GGGAAAGGATGAGTCTACAACCTA 59.285 45.833 0.00 0.00 41.11 3.08
601 608 3.519913 GGGAAAGGATGAGTCTACAACCT 59.480 47.826 0.00 0.00 43.21 3.50
602 609 3.679083 CGGGAAAGGATGAGTCTACAACC 60.679 52.174 0.00 0.00 33.76 3.77
603 610 3.522553 CGGGAAAGGATGAGTCTACAAC 58.477 50.000 0.00 0.00 0.00 3.32
604 611 2.500098 CCGGGAAAGGATGAGTCTACAA 59.500 50.000 0.00 0.00 0.00 2.41
605 612 2.108168 CCGGGAAAGGATGAGTCTACA 58.892 52.381 0.00 0.00 0.00 2.74
606 613 1.413077 CCCGGGAAAGGATGAGTCTAC 59.587 57.143 18.48 0.00 0.00 2.59
607 614 1.289830 TCCCGGGAAAGGATGAGTCTA 59.710 52.381 24.50 0.00 0.00 2.59
608 615 0.042731 TCCCGGGAAAGGATGAGTCT 59.957 55.000 24.50 0.00 0.00 3.24
609 616 0.909623 TTCCCGGGAAAGGATGAGTC 59.090 55.000 33.94 0.00 32.10 3.36
610 617 0.912486 CTTCCCGGGAAAGGATGAGT 59.088 55.000 34.78 0.00 33.34 3.41
611 618 0.464554 GCTTCCCGGGAAAGGATGAG 60.465 60.000 34.78 22.76 33.34 2.90
612 619 1.607612 GCTTCCCGGGAAAGGATGA 59.392 57.895 34.78 13.09 33.34 2.92
613 620 1.819632 CGCTTCCCGGGAAAGGATG 60.820 63.158 34.78 23.81 33.34 3.51
614 621 2.590092 CGCTTCCCGGGAAAGGAT 59.410 61.111 34.78 0.00 33.34 3.24
615 622 4.404098 GCGCTTCCCGGGAAAGGA 62.404 66.667 34.78 15.08 37.44 3.36
616 623 2.325393 ATAGCGCTTCCCGGGAAAGG 62.325 60.000 34.78 28.14 37.44 3.11
617 624 0.391597 TATAGCGCTTCCCGGGAAAG 59.608 55.000 34.78 29.79 37.44 2.62
618 625 0.105408 GTATAGCGCTTCCCGGGAAA 59.895 55.000 34.78 21.39 37.44 3.13
619 626 0.757935 AGTATAGCGCTTCCCGGGAA 60.758 55.000 33.52 33.52 37.44 3.97
620 627 0.111061 TAGTATAGCGCTTCCCGGGA 59.889 55.000 22.63 22.63 37.44 5.14
621 628 0.243095 GTAGTATAGCGCTTCCCGGG 59.757 60.000 18.68 16.85 37.44 5.73
622 629 0.956633 TGTAGTATAGCGCTTCCCGG 59.043 55.000 18.68 0.00 37.44 5.73
623 630 1.607628 ACTGTAGTATAGCGCTTCCCG 59.392 52.381 18.68 0.00 40.75 5.14
624 631 4.037208 TGTTACTGTAGTATAGCGCTTCCC 59.963 45.833 18.68 3.08 0.00 3.97
625 632 5.179045 TGTTACTGTAGTATAGCGCTTCC 57.821 43.478 18.68 3.51 0.00 3.46
626 633 8.967552 AATATGTTACTGTAGTATAGCGCTTC 57.032 34.615 18.68 7.06 0.00 3.86
629 636 9.784680 ACATAATATGTTACTGTAGTATAGCGC 57.215 33.333 0.00 0.00 41.63 5.92
650 657 9.702253 AGGAGAGAGATGTTTAGAGTAACATAA 57.298 33.333 2.29 0.00 45.98 1.90
651 658 9.344772 GAGGAGAGAGATGTTTAGAGTAACATA 57.655 37.037 2.29 0.00 45.98 2.29
653 660 7.175797 TGAGGAGAGAGATGTTTAGAGTAACA 58.824 38.462 0.00 0.00 41.81 2.41
654 661 7.633193 TGAGGAGAGAGATGTTTAGAGTAAC 57.367 40.000 0.00 0.00 0.00 2.50
655 662 8.830915 AATGAGGAGAGAGATGTTTAGAGTAA 57.169 34.615 0.00 0.00 0.00 2.24
656 663 9.922477 TTAATGAGGAGAGAGATGTTTAGAGTA 57.078 33.333 0.00 0.00 0.00 2.59
657 664 8.691797 GTTAATGAGGAGAGAGATGTTTAGAGT 58.308 37.037 0.00 0.00 0.00 3.24
658 665 8.912988 AGTTAATGAGGAGAGAGATGTTTAGAG 58.087 37.037 0.00 0.00 0.00 2.43
659 666 8.830915 AGTTAATGAGGAGAGAGATGTTTAGA 57.169 34.615 0.00 0.00 0.00 2.10
660 667 9.959749 GTAGTTAATGAGGAGAGAGATGTTTAG 57.040 37.037 0.00 0.00 0.00 1.85
661 668 9.475620 TGTAGTTAATGAGGAGAGAGATGTTTA 57.524 33.333 0.00 0.00 0.00 2.01
662 669 8.367660 TGTAGTTAATGAGGAGAGAGATGTTT 57.632 34.615 0.00 0.00 0.00 2.83
663 670 7.962995 TGTAGTTAATGAGGAGAGAGATGTT 57.037 36.000 0.00 0.00 0.00 2.71
664 671 7.471260 GCATGTAGTTAATGAGGAGAGAGATGT 60.471 40.741 0.00 0.00 0.00 3.06
665 672 6.867816 GCATGTAGTTAATGAGGAGAGAGATG 59.132 42.308 0.00 0.00 0.00 2.90
666 673 6.014669 GGCATGTAGTTAATGAGGAGAGAGAT 60.015 42.308 0.00 0.00 0.00 2.75
667 674 5.303078 GGCATGTAGTTAATGAGGAGAGAGA 59.697 44.000 0.00 0.00 0.00 3.10
668 675 5.069648 TGGCATGTAGTTAATGAGGAGAGAG 59.930 44.000 0.00 0.00 0.00 3.20
669 676 4.962362 TGGCATGTAGTTAATGAGGAGAGA 59.038 41.667 0.00 0.00 0.00 3.10
670 677 5.053145 GTGGCATGTAGTTAATGAGGAGAG 58.947 45.833 0.00 0.00 0.00 3.20
671 678 4.469586 TGTGGCATGTAGTTAATGAGGAGA 59.530 41.667 0.00 0.00 0.00 3.71
672 679 4.769688 TGTGGCATGTAGTTAATGAGGAG 58.230 43.478 0.00 0.00 0.00 3.69
673 680 4.835284 TGTGGCATGTAGTTAATGAGGA 57.165 40.909 0.00 0.00 0.00 3.71
674 681 7.066887 TGTTTATGTGGCATGTAGTTAATGAGG 59.933 37.037 0.00 0.00 0.00 3.86
675 682 7.984391 TGTTTATGTGGCATGTAGTTAATGAG 58.016 34.615 0.00 0.00 0.00 2.90
676 683 7.929941 TGTTTATGTGGCATGTAGTTAATGA 57.070 32.000 0.00 0.00 0.00 2.57
677 684 8.978564 TTTGTTTATGTGGCATGTAGTTAATG 57.021 30.769 0.00 0.00 0.00 1.90
678 685 9.988815 TTTTTGTTTATGTGGCATGTAGTTAAT 57.011 25.926 0.00 0.00 0.00 1.40
679 686 9.988815 ATTTTTGTTTATGTGGCATGTAGTTAA 57.011 25.926 0.00 0.00 0.00 2.01
680 687 9.988815 AATTTTTGTTTATGTGGCATGTAGTTA 57.011 25.926 0.00 0.00 0.00 2.24
681 688 8.900983 AATTTTTGTTTATGTGGCATGTAGTT 57.099 26.923 0.00 0.00 0.00 2.24
682 689 8.900983 AAATTTTTGTTTATGTGGCATGTAGT 57.099 26.923 0.00 0.00 0.00 2.73
683 690 9.206870 AGAAATTTTTGTTTATGTGGCATGTAG 57.793 29.630 0.00 0.00 0.00 2.74
684 691 9.553064 AAGAAATTTTTGTTTATGTGGCATGTA 57.447 25.926 0.00 0.00 0.00 2.29
685 692 8.344098 CAAGAAATTTTTGTTTATGTGGCATGT 58.656 29.630 0.00 0.00 0.00 3.21
686 693 8.557864 TCAAGAAATTTTTGTTTATGTGGCATG 58.442 29.630 0.00 0.00 0.00 4.06
687 694 8.674263 TCAAGAAATTTTTGTTTATGTGGCAT 57.326 26.923 0.00 0.00 0.00 4.40
688 695 8.498054 TTCAAGAAATTTTTGTTTATGTGGCA 57.502 26.923 0.00 0.00 0.00 4.92
689 696 9.949174 ATTTCAAGAAATTTTTGTTTATGTGGC 57.051 25.926 2.31 0.00 37.74 5.01
692 699 9.649024 CGCATTTCAAGAAATTTTTGTTTATGT 57.351 25.926 5.34 0.00 38.84 2.29
693 700 8.620641 GCGCATTTCAAGAAATTTTTGTTTATG 58.379 29.630 0.30 6.40 38.84 1.90
694 701 8.558700 AGCGCATTTCAAGAAATTTTTGTTTAT 58.441 25.926 11.47 0.00 38.84 1.40
695 702 7.914465 AGCGCATTTCAAGAAATTTTTGTTTA 58.086 26.923 11.47 0.00 38.84 2.01
696 703 6.784176 AGCGCATTTCAAGAAATTTTTGTTT 58.216 28.000 11.47 0.00 38.84 2.83
697 704 6.362210 AGCGCATTTCAAGAAATTTTTGTT 57.638 29.167 11.47 0.00 38.84 2.83
698 705 5.989551 AGCGCATTTCAAGAAATTTTTGT 57.010 30.435 11.47 0.00 38.84 2.83
699 706 7.512297 ACATAGCGCATTTCAAGAAATTTTTG 58.488 30.769 11.47 0.00 38.84 2.44
700 707 7.656707 ACATAGCGCATTTCAAGAAATTTTT 57.343 28.000 11.47 0.00 38.84 1.94
701 708 7.656707 AACATAGCGCATTTCAAGAAATTTT 57.343 28.000 11.47 0.00 38.84 1.82
702 709 8.931385 ATAACATAGCGCATTTCAAGAAATTT 57.069 26.923 11.47 0.00 38.84 1.82
703 710 8.931385 AATAACATAGCGCATTTCAAGAAATT 57.069 26.923 11.47 0.00 38.84 1.82
705 712 9.663904 GATAATAACATAGCGCATTTCAAGAAA 57.336 29.630 11.47 0.00 34.46 2.52
706 713 9.056005 AGATAATAACATAGCGCATTTCAAGAA 57.944 29.630 11.47 0.00 0.00 2.52
707 714 8.607441 AGATAATAACATAGCGCATTTCAAGA 57.393 30.769 11.47 0.00 0.00 3.02
710 717 9.489084 ACTTAGATAATAACATAGCGCATTTCA 57.511 29.630 11.47 0.00 0.00 2.69
715 722 9.622004 GAGTAACTTAGATAATAACATAGCGCA 57.378 33.333 11.47 0.00 0.00 6.09
716 723 9.074443 GGAGTAACTTAGATAATAACATAGCGC 57.926 37.037 0.00 0.00 0.00 5.92
717 724 9.570488 GGGAGTAACTTAGATAATAACATAGCG 57.430 37.037 0.00 0.00 0.00 4.26
729 736 9.884814 ACTAGTCATAATGGGAGTAACTTAGAT 57.115 33.333 0.00 0.00 0.00 1.98
730 737 9.352191 GACTAGTCATAATGGGAGTAACTTAGA 57.648 37.037 18.20 0.00 0.00 2.10
731 738 9.357161 AGACTAGTCATAATGGGAGTAACTTAG 57.643 37.037 24.44 0.00 0.00 2.18
733 740 9.710818 TTAGACTAGTCATAATGGGAGTAACTT 57.289 33.333 24.44 0.42 0.00 2.66
734 741 9.134055 GTTAGACTAGTCATAATGGGAGTAACT 57.866 37.037 24.44 0.80 0.00 2.24
735 742 8.910944 TGTTAGACTAGTCATAATGGGAGTAAC 58.089 37.037 24.44 17.79 0.00 2.50
736 743 9.656323 ATGTTAGACTAGTCATAATGGGAGTAA 57.344 33.333 24.44 7.58 0.00 2.24
738 745 9.656323 TTATGTTAGACTAGTCATAATGGGAGT 57.344 33.333 24.44 2.59 30.92 3.85
754 761 8.996271 CGTCCCCCTAAAATATTTATGTTAGAC 58.004 37.037 0.01 5.00 36.16 2.59
755 762 8.936787 TCGTCCCCCTAAAATATTTATGTTAGA 58.063 33.333 0.01 0.00 36.16 2.10
756 763 9.563748 TTCGTCCCCCTAAAATATTTATGTTAG 57.436 33.333 0.01 0.00 34.62 2.34
757 764 9.917887 TTTCGTCCCCCTAAAATATTTATGTTA 57.082 29.630 0.01 0.00 0.00 2.41
758 765 8.826293 TTTCGTCCCCCTAAAATATTTATGTT 57.174 30.769 0.01 0.00 0.00 2.71
759 766 8.826293 TTTTCGTCCCCCTAAAATATTTATGT 57.174 30.769 0.01 0.00 0.00 2.29
776 783 4.113354 CAGCTGGAGTACTATTTTCGTCC 58.887 47.826 5.57 0.00 0.00 4.79
780 787 8.773404 TTCTTTACAGCTGGAGTACTATTTTC 57.227 34.615 19.93 0.00 0.00 2.29
787 794 7.817962 TCTTACATTTCTTTACAGCTGGAGTAC 59.182 37.037 19.93 0.00 0.00 2.73
870 878 5.163663 TGTTCGATGGCCTGACAAATATTTC 60.164 40.000 3.32 0.00 0.00 2.17
874 882 3.342377 TGTTCGATGGCCTGACAAATA 57.658 42.857 3.32 0.00 0.00 1.40
875 883 2.198827 TGTTCGATGGCCTGACAAAT 57.801 45.000 3.32 0.00 0.00 2.32
876 884 1.879380 CTTGTTCGATGGCCTGACAAA 59.121 47.619 3.32 0.00 0.00 2.83
877 885 1.522668 CTTGTTCGATGGCCTGACAA 58.477 50.000 3.32 7.01 0.00 3.18
878 886 0.955428 GCTTGTTCGATGGCCTGACA 60.955 55.000 3.32 0.00 0.00 3.58
879 887 1.648467 GGCTTGTTCGATGGCCTGAC 61.648 60.000 3.32 0.00 41.20 3.51
881 889 2.753966 CGGCTTGTTCGATGGCCTG 61.754 63.158 3.32 0.00 42.13 4.85
884 925 0.459585 TCTACGGCTTGTTCGATGGC 60.460 55.000 0.00 0.00 0.00 4.40
893 934 4.109050 GACATCTCTTCTTCTACGGCTTG 58.891 47.826 0.00 0.00 0.00 4.01
916 957 4.458989 TGATTCACTAACAGGCAAATGGAC 59.541 41.667 0.00 0.00 0.00 4.02
917 958 4.661222 TGATTCACTAACAGGCAAATGGA 58.339 39.130 0.00 0.00 0.00 3.41
918 959 5.183713 TCTTGATTCACTAACAGGCAAATGG 59.816 40.000 0.00 0.00 0.00 3.16
930 971 5.592587 TTTCCCCCTTTCTTGATTCACTA 57.407 39.130 0.00 0.00 0.00 2.74
940 981 4.469469 TGACATCTTTTTCCCCCTTTCT 57.531 40.909 0.00 0.00 0.00 2.52
941 982 5.745312 ATTGACATCTTTTTCCCCCTTTC 57.255 39.130 0.00 0.00 0.00 2.62
944 985 4.286808 CCAAATTGACATCTTTTTCCCCCT 59.713 41.667 0.00 0.00 0.00 4.79
955 996 4.145052 GGGGGATCTACCAAATTGACATC 58.855 47.826 8.83 0.00 41.20 3.06
1086 1151 4.143333 GAGGCGCGGGCTAAGTCA 62.143 66.667 24.48 0.00 38.98 3.41
1581 1676 0.955428 TCCTTCTGCATCGCACCAAC 60.955 55.000 0.00 0.00 33.79 3.77
1732 1865 2.787249 CGGATGCCAACAGAAGCG 59.213 61.111 0.00 0.00 0.00 4.68
1855 1994 0.323178 ATTCCTTGTGCTGCCTCCAG 60.323 55.000 0.00 0.00 42.13 3.86
1857 1996 1.941999 GCATTCCTTGTGCTGCCTCC 61.942 60.000 0.00 0.00 39.45 4.30
1921 2066 3.366440 GAAATACTCGAGCCGGTATGT 57.634 47.619 13.61 0.00 0.00 2.29
1940 2085 4.566004 CCACTGGTTATTTCTCAGAACGA 58.434 43.478 0.00 0.00 33.19 3.85
1964 2109 0.103937 CGGGATGACCTTCTCTGAGC 59.896 60.000 0.00 0.00 36.97 4.26
1991 2136 7.592533 CACCAAACAGAAGAACATCATACTTTG 59.407 37.037 0.00 0.00 0.00 2.77
2081 2226 6.906157 ATGTCTTGATGTCCACTGAAAAAT 57.094 33.333 0.00 0.00 0.00 1.82
2115 2266 1.811679 GGAGCCTTCGCCGAAGAAG 60.812 63.158 27.35 13.05 41.71 2.85
2134 2285 2.866762 GTTCACCACTATCGGAGCAATC 59.133 50.000 0.00 0.00 0.00 2.67
2137 2288 1.557099 AGTTCACCACTATCGGAGCA 58.443 50.000 0.00 0.00 31.97 4.26
2612 2991 5.675684 AACAACCCAAAATCAACAGTTCT 57.324 34.783 0.00 0.00 0.00 3.01
2629 3009 3.803555 CAGCAGAGAATCGACAAACAAC 58.196 45.455 0.00 0.00 42.67 3.32
2651 3031 1.949525 CCTTCATGTTTAGCCCATCGG 59.050 52.381 0.00 0.00 0.00 4.18
2657 3037 7.588497 ATTTCCTTATCCTTCATGTTTAGCC 57.412 36.000 0.00 0.00 0.00 3.93
2707 3087 9.892130 GCTATAAGCATAAAGTTACCTATCCAT 57.108 33.333 0.00 0.00 41.89 3.41
2766 3146 7.700656 GTGTATCCATGTATACAACCTTTTTGC 59.299 37.037 12.21 0.00 42.43 3.68
2913 3333 2.629617 CAAGAAGGAAACAAGGCCATGT 59.370 45.455 8.06 8.06 34.24 3.21
2943 3363 4.148348 CGATAAGAATGCAGTACGCTAACC 59.852 45.833 10.27 0.08 43.06 2.85
2946 3366 4.563337 ACGATAAGAATGCAGTACGCTA 57.437 40.909 10.27 0.00 43.06 4.26
2953 3373 7.540400 CCTAGAGTTCATACGATAAGAATGCAG 59.460 40.741 0.00 0.00 0.00 4.41
3046 3469 8.082242 AGACTTCAAAATATGTACTTTGCAACC 58.918 33.333 0.00 0.00 33.45 3.77
3074 3497 6.248433 AGAAAGAACATGCTAATCAGGGAAA 58.752 36.000 0.00 0.00 0.00 3.13
3135 3558 0.975556 GGGTATTTGCAAGGGGGTGG 60.976 60.000 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.