Multiple sequence alignment - TraesCS3D01G514200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G514200 chr3D 100.000 7510 0 0 1 7510 598036231 598043740 0.000000e+00 13869.0
1 TraesCS3D01G514200 chr3D 83.832 1070 164 8 5605 6672 598162139 598163201 0.000000e+00 1009.0
2 TraesCS3D01G514200 chr3D 83.874 924 142 7 5606 6525 598079924 598080844 0.000000e+00 874.0
3 TraesCS3D01G514200 chr3D 82.962 763 68 34 791 1502 598160779 598161530 3.820000e-177 632.0
4 TraesCS3D01G514200 chr3D 86.404 559 55 12 987 1531 597924061 597923510 6.490000e-165 592.0
5 TraesCS3D01G514200 chr3A 93.384 4111 160 63 550 4586 728006628 728010700 0.000000e+00 5982.0
6 TraesCS3D01G514200 chr3A 95.742 2959 87 20 4571 7510 728010755 728013693 0.000000e+00 4730.0
7 TraesCS3D01G514200 chr3A 96.964 1614 38 10 5901 7510 729682092 729680486 0.000000e+00 2699.0
8 TraesCS3D01G514200 chr3A 96.365 1623 39 11 5901 7510 728027171 728028786 0.000000e+00 2654.0
9 TraesCS3D01G514200 chr3A 83.847 1071 168 3 5603 6672 728321964 728323030 0.000000e+00 1014.0
10 TraesCS3D01G514200 chr3A 83.899 913 142 5 5603 6512 728100099 728101009 0.000000e+00 867.0
11 TraesCS3D01G514200 chr3A 88.268 537 39 12 987 1502 728320744 728321277 8.280000e-174 621.0
12 TraesCS3D01G514200 chr3A 88.947 190 16 3 1342 1531 727761152 727760968 5.860000e-56 230.0
13 TraesCS3D01G514200 chr3B 88.201 2907 271 41 4631 7510 804975932 804978793 0.000000e+00 3402.0
14 TraesCS3D01G514200 chr3B 89.778 1125 86 19 1618 2738 804972620 804973719 0.000000e+00 1413.0
15 TraesCS3D01G514200 chr3B 79.606 1878 268 74 2740 4581 804973998 804975796 0.000000e+00 1240.0
16 TraesCS3D01G514200 chr3B 94.501 691 27 7 940 1619 804971669 804972359 0.000000e+00 1055.0
17 TraesCS3D01G514200 chr3B 83.112 1054 169 5 5603 6654 805256931 805257977 0.000000e+00 952.0
18 TraesCS3D01G514200 chr3B 90.278 504 40 5 1036 1532 805255589 805256090 0.000000e+00 651.0
19 TraesCS3D01G514200 chr3B 90.511 137 9 2 717 853 804971486 804971618 2.150000e-40 178.0
20 TraesCS3D01G514200 chr3B 84.483 116 16 2 1053 1167 754229337 754229223 6.160000e-21 113.0
21 TraesCS3D01G514200 chr3B 84.884 86 13 0 534 619 804971408 804971493 3.730000e-13 87.9
22 TraesCS3D01G514200 chr3B 88.235 68 5 2 791 858 805255285 805255349 2.250000e-10 78.7
23 TraesCS3D01G514200 chrUn 96.845 1458 34 11 6057 7510 351475021 351473572 0.000000e+00 2427.0
24 TraesCS3D01G514200 chr5A 82.576 132 23 0 1036 1167 22723960 22724091 4.760000e-22 117.0
25 TraesCS3D01G514200 chr1B 78.736 174 34 3 3650 3820 520902304 520902131 6.160000e-21 113.0
26 TraesCS3D01G514200 chr1B 100.000 28 0 0 3057 3084 84954437 84954464 1.400000e-02 52.8
27 TraesCS3D01G514200 chr5D 82.906 117 20 0 1053 1169 34051855 34051739 1.030000e-18 106.0
28 TraesCS3D01G514200 chr5D 82.759 116 20 0 1053 1168 34061347 34061232 3.710000e-18 104.0
29 TraesCS3D01G514200 chr7D 92.000 50 3 1 3407 3456 621738721 621738673 1.350000e-07 69.4
30 TraesCS3D01G514200 chr7D 87.500 56 5 2 3052 3107 124169902 124169849 6.290000e-06 63.9
31 TraesCS3D01G514200 chr4A 86.538 52 7 0 3044 3095 5966661 5966712 2.930000e-04 58.4
32 TraesCS3D01G514200 chr4B 89.362 47 1 3 3664 3709 634993408 634993451 1.000000e-03 56.5
33 TraesCS3D01G514200 chr7B 100.000 29 0 0 3059 3087 687036342 687036370 4.000000e-03 54.7
34 TraesCS3D01G514200 chr6D 96.774 31 1 0 3057 3087 315645037 315645067 1.400000e-02 52.8
35 TraesCS3D01G514200 chr1A 100.000 28 0 0 3057 3084 52557089 52557116 1.400000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G514200 chr3D 598036231 598043740 7509 False 13869.000000 13869 100.000000 1 7510 1 chr3D.!!$F1 7509
1 TraesCS3D01G514200 chr3D 598079924 598080844 920 False 874.000000 874 83.874000 5606 6525 1 chr3D.!!$F2 919
2 TraesCS3D01G514200 chr3D 598160779 598163201 2422 False 820.500000 1009 83.397000 791 6672 2 chr3D.!!$F3 5881
3 TraesCS3D01G514200 chr3D 597923510 597924061 551 True 592.000000 592 86.404000 987 1531 1 chr3D.!!$R1 544
4 TraesCS3D01G514200 chr3A 728006628 728013693 7065 False 5356.000000 5982 94.563000 550 7510 2 chr3A.!!$F3 6960
5 TraesCS3D01G514200 chr3A 729680486 729682092 1606 True 2699.000000 2699 96.964000 5901 7510 1 chr3A.!!$R2 1609
6 TraesCS3D01G514200 chr3A 728027171 728028786 1615 False 2654.000000 2654 96.365000 5901 7510 1 chr3A.!!$F1 1609
7 TraesCS3D01G514200 chr3A 728100099 728101009 910 False 867.000000 867 83.899000 5603 6512 1 chr3A.!!$F2 909
8 TraesCS3D01G514200 chr3A 728320744 728323030 2286 False 817.500000 1014 86.057500 987 6672 2 chr3A.!!$F4 5685
9 TraesCS3D01G514200 chr3B 804971408 804978793 7385 False 1229.316667 3402 87.913500 534 7510 6 chr3B.!!$F1 6976
10 TraesCS3D01G514200 chr3B 805255285 805257977 2692 False 560.566667 952 87.208333 791 6654 3 chr3B.!!$F2 5863
11 TraesCS3D01G514200 chrUn 351473572 351475021 1449 True 2427.000000 2427 96.845000 6057 7510 1 chrUn.!!$R1 1453

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
267 268 0.030638 CGTGACAAGGCAAGTTTGGG 59.969 55.000 0.00 0.00 0.00 4.12 F
483 484 0.033011 GAGGACTACTGCCTGGAGGA 60.033 60.000 0.00 0.00 35.44 3.71 F
810 845 0.039527 CCCTAAACAAAGCACGCACC 60.040 55.000 0.00 0.00 0.00 5.01 F
1566 1736 0.602638 TGCATCGGGACAGTTGACAC 60.603 55.000 0.00 0.00 0.00 3.67 F
2739 3420 1.812922 CCAAGTGAGCAGCGCTAGG 60.813 63.158 10.99 0.00 39.88 3.02 F
2923 3881 0.675083 TCACCCTCGCGTTTTCAGTA 59.325 50.000 5.77 0.00 0.00 2.74 F
3862 4853 0.398318 AACAGAGAAGGTGGGAGTGC 59.602 55.000 0.00 0.00 0.00 4.40 F
4721 5823 0.468029 ATGGGCTCGCCATAAAAGGG 60.468 55.000 10.51 0.00 37.98 3.95 F
4973 6078 0.678048 GAGGTGCGGCTCCAAGAAAT 60.678 55.000 21.85 1.01 0.00 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2261 2940 2.035632 CACACCTTAAAAACTGGGCCA 58.964 47.619 5.85 5.85 0.00 5.36 R
2383 3063 4.097135 TCAGCTGGTTTTCGAAAATGTTCA 59.903 37.500 24.93 18.23 32.89 3.18 R
2484 3165 5.643379 TCTGATGGGTCATAAAAAGTTGC 57.357 39.130 0.00 0.00 32.98 4.17 R
2904 3862 0.675083 TACTGAAAACGCGAGGGTGA 59.325 50.000 15.93 0.00 0.00 4.02 R
3794 4785 1.461127 CACTTGTCGCAAACTAGGAGC 59.539 52.381 0.00 0.00 35.34 4.70 R
4726 5828 1.802960 ACATTCTGCAAAGAGCTCACG 59.197 47.619 17.77 4.51 45.94 4.35 R
5127 6243 0.455633 GGCGACTCTTTTGCATGCAG 60.456 55.000 21.50 11.44 36.11 4.41 R
5988 7114 1.622607 CCCCATGCGGTCTCCACTAA 61.623 60.000 0.00 0.00 0.00 2.24 R
6732 7860 1.992667 CGCGCAGTTTGACTTGAGATA 59.007 47.619 8.75 0.00 0.00 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.951256 GACTCATTTTAGTCCCAAATTTGC 57.049 37.500 12.92 0.00 40.06 3.68
24 25 6.670695 ACTCATTTTAGTCCCAAATTTGCT 57.329 33.333 12.92 7.28 0.00 3.91
25 26 6.691508 ACTCATTTTAGTCCCAAATTTGCTC 58.308 36.000 12.92 5.22 0.00 4.26
26 27 5.708948 TCATTTTAGTCCCAAATTTGCTCG 58.291 37.500 12.92 2.55 0.00 5.03
27 28 3.569250 TTTAGTCCCAAATTTGCTCGC 57.431 42.857 12.92 2.90 0.00 5.03
28 29 1.083489 TAGTCCCAAATTTGCTCGCG 58.917 50.000 12.92 0.00 0.00 5.87
29 30 0.605319 AGTCCCAAATTTGCTCGCGA 60.605 50.000 9.26 9.26 0.00 5.87
30 31 0.451783 GTCCCAAATTTGCTCGCGAT 59.548 50.000 10.36 0.00 0.00 4.58
31 32 1.135402 GTCCCAAATTTGCTCGCGATT 60.135 47.619 10.36 0.00 0.00 3.34
32 33 1.543802 TCCCAAATTTGCTCGCGATTT 59.456 42.857 10.36 3.64 0.00 2.17
33 34 1.655099 CCCAAATTTGCTCGCGATTTG 59.345 47.619 20.00 20.00 33.43 2.32
34 35 1.655099 CCAAATTTGCTCGCGATTTGG 59.345 47.619 27.38 27.38 43.25 3.28
35 36 2.594321 CAAATTTGCTCGCGATTTGGA 58.406 42.857 19.45 4.29 0.00 3.53
36 37 3.181397 CAAATTTGCTCGCGATTTGGAT 58.819 40.909 19.45 5.53 0.00 3.41
37 38 2.763249 ATTTGCTCGCGATTTGGATC 57.237 45.000 10.36 0.00 0.00 3.36
38 39 0.732571 TTTGCTCGCGATTTGGATCC 59.267 50.000 10.36 4.20 0.00 3.36
39 40 1.428370 TTGCTCGCGATTTGGATCCG 61.428 55.000 10.36 0.00 0.00 4.18
40 41 1.883084 GCTCGCGATTTGGATCCGT 60.883 57.895 10.36 0.00 31.87 4.69
41 42 0.596600 GCTCGCGATTTGGATCCGTA 60.597 55.000 10.36 0.00 31.87 4.02
42 43 1.409412 CTCGCGATTTGGATCCGTAG 58.591 55.000 10.36 0.00 31.87 3.51
43 44 0.596600 TCGCGATTTGGATCCGTAGC 60.597 55.000 3.71 6.92 31.87 3.58
44 45 0.874175 CGCGATTTGGATCCGTAGCA 60.874 55.000 7.39 0.00 0.00 3.49
45 46 0.861837 GCGATTTGGATCCGTAGCAG 59.138 55.000 7.39 0.00 0.00 4.24
46 47 1.538204 GCGATTTGGATCCGTAGCAGA 60.538 52.381 7.39 0.00 0.00 4.26
47 48 2.128035 CGATTTGGATCCGTAGCAGAC 58.872 52.381 7.39 0.00 0.00 3.51
48 49 2.481276 CGATTTGGATCCGTAGCAGACA 60.481 50.000 7.39 0.00 0.00 3.41
49 50 2.380084 TTTGGATCCGTAGCAGACAC 57.620 50.000 7.39 0.00 0.00 3.67
50 51 1.262417 TTGGATCCGTAGCAGACACA 58.738 50.000 7.39 0.00 0.00 3.72
51 52 1.262417 TGGATCCGTAGCAGACACAA 58.738 50.000 7.39 0.00 0.00 3.33
52 53 1.621317 TGGATCCGTAGCAGACACAAA 59.379 47.619 7.39 0.00 0.00 2.83
53 54 2.000447 GGATCCGTAGCAGACACAAAC 59.000 52.381 0.00 0.00 0.00 2.93
54 55 2.000447 GATCCGTAGCAGACACAAACC 59.000 52.381 0.00 0.00 0.00 3.27
55 56 0.319211 TCCGTAGCAGACACAAACCG 60.319 55.000 0.00 0.00 0.00 4.44
56 57 1.289109 CCGTAGCAGACACAAACCGG 61.289 60.000 0.00 0.00 0.00 5.28
57 58 0.319211 CGTAGCAGACACAAACCGGA 60.319 55.000 9.46 0.00 0.00 5.14
58 59 1.145803 GTAGCAGACACAAACCGGAC 58.854 55.000 9.46 0.00 0.00 4.79
59 60 0.319211 TAGCAGACACAAACCGGACG 60.319 55.000 9.46 0.00 0.00 4.79
60 61 1.885850 GCAGACACAAACCGGACGT 60.886 57.895 9.46 0.00 0.00 4.34
61 62 1.433837 GCAGACACAAACCGGACGTT 61.434 55.000 9.46 0.00 35.70 3.99
62 63 0.580104 CAGACACAAACCGGACGTTC 59.420 55.000 9.46 3.05 31.78 3.95
63 64 0.462789 AGACACAAACCGGACGTTCT 59.537 50.000 9.46 5.21 31.78 3.01
64 65 0.857287 GACACAAACCGGACGTTCTC 59.143 55.000 9.46 0.00 31.78 2.87
65 66 0.462789 ACACAAACCGGACGTTCTCT 59.537 50.000 9.46 0.00 31.78 3.10
66 67 1.682854 ACACAAACCGGACGTTCTCTA 59.317 47.619 9.46 0.00 31.78 2.43
67 68 2.298163 ACACAAACCGGACGTTCTCTAT 59.702 45.455 9.46 0.00 31.78 1.98
68 69 2.666508 CACAAACCGGACGTTCTCTATG 59.333 50.000 9.46 0.00 31.78 2.23
69 70 2.298163 ACAAACCGGACGTTCTCTATGT 59.702 45.455 9.46 0.00 31.78 2.29
70 71 2.921754 CAAACCGGACGTTCTCTATGTC 59.078 50.000 9.46 0.00 41.26 3.06
76 77 2.452105 GACGTTCTCTATGTCCTTCGC 58.548 52.381 0.00 0.00 36.89 4.70
77 78 1.202154 ACGTTCTCTATGTCCTTCGCG 60.202 52.381 0.00 0.00 0.00 5.87
78 79 1.202154 CGTTCTCTATGTCCTTCGCGT 60.202 52.381 5.77 0.00 0.00 6.01
79 80 2.452105 GTTCTCTATGTCCTTCGCGTC 58.548 52.381 5.77 0.00 0.00 5.19
80 81 0.656259 TCTCTATGTCCTTCGCGTCG 59.344 55.000 5.77 0.00 0.00 5.12
81 82 0.317103 CTCTATGTCCTTCGCGTCGG 60.317 60.000 5.77 8.14 0.00 4.79
82 83 1.944676 CTATGTCCTTCGCGTCGGC 60.945 63.158 5.77 5.13 0.00 5.54
83 84 2.337749 CTATGTCCTTCGCGTCGGCT 62.338 60.000 5.77 0.00 36.88 5.52
84 85 2.607668 TATGTCCTTCGCGTCGGCTG 62.608 60.000 5.77 0.00 36.88 4.85
85 86 4.719369 GTCCTTCGCGTCGGCTGT 62.719 66.667 5.77 0.00 36.88 4.40
86 87 4.717629 TCCTTCGCGTCGGCTGTG 62.718 66.667 5.77 0.00 36.88 3.66
88 89 3.470567 CTTCGCGTCGGCTGTGTC 61.471 66.667 5.77 0.00 36.88 3.67
97 98 3.058160 GGCTGTGTCCGCTGCATT 61.058 61.111 11.06 0.00 35.44 3.56
98 99 2.482374 GCTGTGTCCGCTGCATTC 59.518 61.111 0.00 0.00 34.18 2.67
99 100 2.780643 CTGTGTCCGCTGCATTCG 59.219 61.111 0.00 0.00 0.00 3.34
100 101 1.737735 CTGTGTCCGCTGCATTCGA 60.738 57.895 9.69 0.00 0.00 3.71
101 102 1.690283 CTGTGTCCGCTGCATTCGAG 61.690 60.000 9.69 1.59 0.00 4.04
102 103 2.815211 TGTCCGCTGCATTCGAGC 60.815 61.111 9.69 0.00 0.00 5.03
103 104 3.567797 GTCCGCTGCATTCGAGCC 61.568 66.667 9.69 0.00 32.41 4.70
104 105 4.838152 TCCGCTGCATTCGAGCCC 62.838 66.667 9.69 0.00 32.41 5.19
107 108 3.267860 GCTGCATTCGAGCCCGAG 61.268 66.667 0.00 0.00 46.39 4.63
108 109 3.267860 CTGCATTCGAGCCCGAGC 61.268 66.667 0.00 0.00 46.39 5.03
109 110 4.838152 TGCATTCGAGCCCGAGCC 62.838 66.667 0.00 0.00 46.39 4.70
119 120 3.461773 CCCGAGCCCGTCTGTCAT 61.462 66.667 0.00 0.00 0.00 3.06
120 121 2.579201 CCGAGCCCGTCTGTCATT 59.421 61.111 0.00 0.00 0.00 2.57
121 122 1.811266 CCGAGCCCGTCTGTCATTG 60.811 63.158 0.00 0.00 0.00 2.82
122 123 1.215382 CGAGCCCGTCTGTCATTGA 59.785 57.895 0.00 0.00 0.00 2.57
123 124 0.179100 CGAGCCCGTCTGTCATTGAT 60.179 55.000 0.00 0.00 0.00 2.57
124 125 1.067060 CGAGCCCGTCTGTCATTGATA 59.933 52.381 0.00 0.00 0.00 2.15
125 126 2.474816 GAGCCCGTCTGTCATTGATAC 58.525 52.381 0.00 0.00 0.00 2.24
126 127 1.831106 AGCCCGTCTGTCATTGATACA 59.169 47.619 0.00 0.00 0.00 2.29
127 128 2.236146 AGCCCGTCTGTCATTGATACAA 59.764 45.455 0.00 0.00 0.00 2.41
128 129 2.609459 GCCCGTCTGTCATTGATACAAG 59.391 50.000 0.00 0.00 0.00 3.16
129 130 3.198068 CCCGTCTGTCATTGATACAAGG 58.802 50.000 0.00 0.00 0.00 3.61
130 131 3.198068 CCGTCTGTCATTGATACAAGGG 58.802 50.000 0.00 0.00 0.00 3.95
131 132 3.198068 CGTCTGTCATTGATACAAGGGG 58.802 50.000 0.00 0.00 0.00 4.79
132 133 3.545703 GTCTGTCATTGATACAAGGGGG 58.454 50.000 0.00 0.00 0.00 5.40
151 152 2.202987 CGCAGCCCACAGATCTCC 60.203 66.667 0.00 0.00 0.00 3.71
152 153 2.191641 GCAGCCCACAGATCTCCC 59.808 66.667 0.00 0.00 0.00 4.30
153 154 2.914289 CAGCCCACAGATCTCCCC 59.086 66.667 0.00 0.00 0.00 4.81
154 155 1.692042 CAGCCCACAGATCTCCCCT 60.692 63.158 0.00 0.00 0.00 4.79
155 156 1.083706 AGCCCACAGATCTCCCCTT 59.916 57.895 0.00 0.00 0.00 3.95
156 157 0.985490 AGCCCACAGATCTCCCCTTC 60.985 60.000 0.00 0.00 0.00 3.46
157 158 0.985490 GCCCACAGATCTCCCCTTCT 60.985 60.000 0.00 0.00 0.00 2.85
158 159 1.127343 CCCACAGATCTCCCCTTCTC 58.873 60.000 0.00 0.00 0.00 2.87
159 160 1.343884 CCCACAGATCTCCCCTTCTCT 60.344 57.143 0.00 0.00 0.00 3.10
160 161 2.038659 CCACAGATCTCCCCTTCTCTC 58.961 57.143 0.00 0.00 0.00 3.20
161 162 2.359143 CCACAGATCTCCCCTTCTCTCT 60.359 54.545 0.00 0.00 0.00 3.10
162 163 2.958355 CACAGATCTCCCCTTCTCTCTC 59.042 54.545 0.00 0.00 0.00 3.20
163 164 2.858768 ACAGATCTCCCCTTCTCTCTCT 59.141 50.000 0.00 0.00 0.00 3.10
164 165 3.117512 ACAGATCTCCCCTTCTCTCTCTC 60.118 52.174 0.00 0.00 0.00 3.20
165 166 3.139025 CAGATCTCCCCTTCTCTCTCTCT 59.861 52.174 0.00 0.00 0.00 3.10
166 167 3.139025 AGATCTCCCCTTCTCTCTCTCTG 59.861 52.174 0.00 0.00 0.00 3.35
167 168 2.283834 TCTCCCCTTCTCTCTCTCTGT 58.716 52.381 0.00 0.00 0.00 3.41
168 169 2.241176 TCTCCCCTTCTCTCTCTCTGTC 59.759 54.545 0.00 0.00 0.00 3.51
169 170 2.242196 CTCCCCTTCTCTCTCTCTGTCT 59.758 54.545 0.00 0.00 0.00 3.41
170 171 2.241176 TCCCCTTCTCTCTCTCTGTCTC 59.759 54.545 0.00 0.00 0.00 3.36
171 172 2.654863 CCCTTCTCTCTCTCTGTCTCC 58.345 57.143 0.00 0.00 0.00 3.71
172 173 2.242196 CCCTTCTCTCTCTCTGTCTCCT 59.758 54.545 0.00 0.00 0.00 3.69
173 174 3.282021 CCTTCTCTCTCTCTGTCTCCTG 58.718 54.545 0.00 0.00 0.00 3.86
174 175 2.418368 TCTCTCTCTCTGTCTCCTGC 57.582 55.000 0.00 0.00 0.00 4.85
175 176 1.064758 TCTCTCTCTCTGTCTCCTGCC 60.065 57.143 0.00 0.00 0.00 4.85
176 177 0.701147 TCTCTCTCTGTCTCCTGCCA 59.299 55.000 0.00 0.00 0.00 4.92
177 178 1.287442 TCTCTCTCTGTCTCCTGCCAT 59.713 52.381 0.00 0.00 0.00 4.40
178 179 1.409790 CTCTCTCTGTCTCCTGCCATG 59.590 57.143 0.00 0.00 0.00 3.66
179 180 1.006400 TCTCTCTGTCTCCTGCCATGA 59.994 52.381 0.00 0.00 0.00 3.07
180 181 1.136695 CTCTCTGTCTCCTGCCATGAC 59.863 57.143 0.00 0.00 0.00 3.06
181 182 0.177604 CTCTGTCTCCTGCCATGACC 59.822 60.000 0.00 0.00 0.00 4.02
182 183 1.222936 CTGTCTCCTGCCATGACCC 59.777 63.158 0.00 0.00 0.00 4.46
183 184 1.538629 TGTCTCCTGCCATGACCCA 60.539 57.895 0.00 0.00 0.00 4.51
184 185 1.133181 TGTCTCCTGCCATGACCCAA 61.133 55.000 0.00 0.00 0.00 4.12
185 186 0.257039 GTCTCCTGCCATGACCCAAT 59.743 55.000 0.00 0.00 0.00 3.16
186 187 0.256752 TCTCCTGCCATGACCCAATG 59.743 55.000 0.00 0.00 0.00 2.82
197 198 4.114997 CCCAATGGGCGCGACAAC 62.115 66.667 17.00 0.00 35.35 3.32
198 199 3.055719 CCAATGGGCGCGACAACT 61.056 61.111 17.00 0.00 0.00 3.16
199 200 2.480555 CAATGGGCGCGACAACTC 59.519 61.111 17.00 0.00 0.00 3.01
200 201 2.746277 AATGGGCGCGACAACTCC 60.746 61.111 17.00 0.90 0.00 3.85
201 202 3.545124 AATGGGCGCGACAACTCCA 62.545 57.895 17.00 1.03 0.00 3.86
202 203 3.545124 ATGGGCGCGACAACTCCAA 62.545 57.895 17.00 0.00 0.00 3.53
203 204 3.723348 GGGCGCGACAACTCCAAC 61.723 66.667 17.00 0.00 0.00 3.77
204 205 4.072088 GGCGCGACAACTCCAACG 62.072 66.667 12.10 0.00 0.00 4.10
205 206 4.072088 GCGCGACAACTCCAACGG 62.072 66.667 12.10 0.00 0.00 4.44
206 207 4.072088 CGCGACAACTCCAACGGC 62.072 66.667 0.00 0.00 0.00 5.68
207 208 4.072088 GCGACAACTCCAACGGCG 62.072 66.667 4.80 4.80 0.00 6.46
208 209 2.355363 CGACAACTCCAACGGCGA 60.355 61.111 16.62 0.00 0.00 5.54
209 210 2.654912 CGACAACTCCAACGGCGAC 61.655 63.158 16.62 0.00 0.00 5.19
240 241 3.694538 GCAAGGCGGGGCAACAAT 61.695 61.111 0.00 0.00 39.74 2.71
241 242 2.262292 CAAGGCGGGGCAACAATG 59.738 61.111 0.00 0.00 39.74 2.82
250 251 4.383602 GCAACAATGCGACGGCGT 62.384 61.111 14.65 14.65 43.83 5.68
251 252 2.499520 CAACAATGCGACGGCGTG 60.500 61.111 21.19 11.42 44.10 5.34
252 253 2.663520 AACAATGCGACGGCGTGA 60.664 55.556 21.19 0.00 44.10 4.35
253 254 2.950172 AACAATGCGACGGCGTGAC 61.950 57.895 21.19 9.97 44.10 3.67
254 255 3.410516 CAATGCGACGGCGTGACA 61.411 61.111 21.19 16.30 44.10 3.58
255 256 2.663520 AATGCGACGGCGTGACAA 60.664 55.556 21.19 0.00 44.10 3.18
256 257 2.667318 AATGCGACGGCGTGACAAG 61.667 57.895 21.19 4.37 44.10 3.16
260 261 2.970324 GACGGCGTGACAAGGCAA 60.970 61.111 21.19 0.00 38.98 4.52
261 262 2.954753 GACGGCGTGACAAGGCAAG 61.955 63.158 21.19 2.46 38.98 4.01
262 263 2.972505 CGGCGTGACAAGGCAAGT 60.973 61.111 14.83 0.00 38.98 3.16
263 264 2.542907 CGGCGTGACAAGGCAAGTT 61.543 57.895 14.83 0.00 38.98 2.66
264 265 1.733526 GGCGTGACAAGGCAAGTTT 59.266 52.632 10.02 0.00 38.98 2.66
265 266 0.594796 GGCGTGACAAGGCAAGTTTG 60.595 55.000 10.02 0.00 38.98 2.93
266 267 0.594796 GCGTGACAAGGCAAGTTTGG 60.595 55.000 0.00 0.00 37.15 3.28
267 268 0.030638 CGTGACAAGGCAAGTTTGGG 59.969 55.000 0.00 0.00 0.00 4.12
268 269 0.249447 GTGACAAGGCAAGTTTGGGC 60.249 55.000 0.00 0.00 0.00 5.36
269 270 1.007387 GACAAGGCAAGTTTGGGCG 60.007 57.895 0.00 0.00 35.71 6.13
270 271 1.452145 GACAAGGCAAGTTTGGGCGA 61.452 55.000 0.00 0.00 35.71 5.54
271 272 0.827507 ACAAGGCAAGTTTGGGCGAT 60.828 50.000 0.00 0.00 35.71 4.58
272 273 0.388907 CAAGGCAAGTTTGGGCGATG 60.389 55.000 0.00 0.00 35.71 3.84
273 274 1.535204 AAGGCAAGTTTGGGCGATGG 61.535 55.000 0.00 0.00 35.71 3.51
274 275 2.125952 GCAAGTTTGGGCGATGGC 60.126 61.111 0.00 0.00 38.90 4.40
275 276 2.179018 CAAGTTTGGGCGATGGCG 59.821 61.111 0.00 0.00 41.24 5.69
304 305 4.452733 GGCCACTCCGTCGGGAAG 62.453 72.222 12.29 4.81 43.27 3.46
306 307 3.382832 CCACTCCGTCGGGAAGCT 61.383 66.667 12.29 0.00 43.27 3.74
307 308 2.182030 CACTCCGTCGGGAAGCTC 59.818 66.667 12.29 0.00 43.27 4.09
308 309 3.069318 ACTCCGTCGGGAAGCTCC 61.069 66.667 12.29 0.00 43.27 4.70
309 310 3.068691 CTCCGTCGGGAAGCTCCA 61.069 66.667 12.29 0.00 43.27 3.86
310 311 3.358076 CTCCGTCGGGAAGCTCCAC 62.358 68.421 12.29 0.00 43.27 4.02
311 312 4.796231 CCGTCGGGAAGCTCCACG 62.796 72.222 2.34 0.00 38.64 4.94
312 313 4.796231 CGTCGGGAAGCTCCACGG 62.796 72.222 0.00 0.00 38.64 4.94
316 317 4.021925 GGGAAGCTCCACGGCACT 62.022 66.667 0.00 0.00 38.64 4.40
317 318 2.435059 GGAAGCTCCACGGCACTC 60.435 66.667 0.00 0.00 36.28 3.51
318 319 2.435059 GAAGCTCCACGGCACTCC 60.435 66.667 0.00 0.00 34.17 3.85
319 320 2.925170 AAGCTCCACGGCACTCCT 60.925 61.111 0.00 0.00 34.17 3.69
320 321 3.245668 AAGCTCCACGGCACTCCTG 62.246 63.158 0.00 0.00 34.17 3.86
321 322 4.767255 GCTCCACGGCACTCCTGG 62.767 72.222 0.00 0.00 34.16 4.45
322 323 4.767255 CTCCACGGCACTCCTGGC 62.767 72.222 0.00 0.00 39.65 4.85
343 344 4.379243 CAGTTCCGCGGCCACTCT 62.379 66.667 23.51 10.75 0.00 3.24
344 345 4.379243 AGTTCCGCGGCCACTCTG 62.379 66.667 23.51 0.00 0.00 3.35
366 367 4.828925 GCAGCTCCGAGGCCACTC 62.829 72.222 5.01 0.00 40.44 3.51
398 399 2.440599 GGCACCTCAACCCACCAT 59.559 61.111 0.00 0.00 0.00 3.55
399 400 1.678970 GGCACCTCAACCCACCATC 60.679 63.158 0.00 0.00 0.00 3.51
400 401 2.040544 GCACCTCAACCCACCATCG 61.041 63.158 0.00 0.00 0.00 3.84
401 402 1.676968 CACCTCAACCCACCATCGA 59.323 57.895 0.00 0.00 0.00 3.59
402 403 0.673644 CACCTCAACCCACCATCGAC 60.674 60.000 0.00 0.00 0.00 4.20
403 404 1.125093 ACCTCAACCCACCATCGACA 61.125 55.000 0.00 0.00 0.00 4.35
404 405 0.673644 CCTCAACCCACCATCGACAC 60.674 60.000 0.00 0.00 0.00 3.67
405 406 0.673644 CTCAACCCACCATCGACACC 60.674 60.000 0.00 0.00 0.00 4.16
406 407 1.125093 TCAACCCACCATCGACACCT 61.125 55.000 0.00 0.00 0.00 4.00
407 408 0.673644 CAACCCACCATCGACACCTC 60.674 60.000 0.00 0.00 0.00 3.85
408 409 1.838073 AACCCACCATCGACACCTCC 61.838 60.000 0.00 0.00 0.00 4.30
409 410 1.990060 CCCACCATCGACACCTCCT 60.990 63.158 0.00 0.00 0.00 3.69
410 411 1.517832 CCACCATCGACACCTCCTC 59.482 63.158 0.00 0.00 0.00 3.71
411 412 1.257750 CCACCATCGACACCTCCTCA 61.258 60.000 0.00 0.00 0.00 3.86
412 413 0.608130 CACCATCGACACCTCCTCAA 59.392 55.000 0.00 0.00 0.00 3.02
413 414 0.608640 ACCATCGACACCTCCTCAAC 59.391 55.000 0.00 0.00 0.00 3.18
414 415 0.108138 CCATCGACACCTCCTCAACC 60.108 60.000 0.00 0.00 0.00 3.77
415 416 0.108138 CATCGACACCTCCTCAACCC 60.108 60.000 0.00 0.00 0.00 4.11
416 417 0.544357 ATCGACACCTCCTCAACCCA 60.544 55.000 0.00 0.00 0.00 4.51
417 418 0.544357 TCGACACCTCCTCAACCCAT 60.544 55.000 0.00 0.00 0.00 4.00
418 419 0.108138 CGACACCTCCTCAACCCATC 60.108 60.000 0.00 0.00 0.00 3.51
419 420 0.108138 GACACCTCCTCAACCCATCG 60.108 60.000 0.00 0.00 0.00 3.84
420 421 1.450312 CACCTCCTCAACCCATCGC 60.450 63.158 0.00 0.00 0.00 4.58
421 422 2.190578 CCTCCTCAACCCATCGCC 59.809 66.667 0.00 0.00 0.00 5.54
422 423 2.370445 CCTCCTCAACCCATCGCCT 61.370 63.158 0.00 0.00 0.00 5.52
423 424 1.144936 CTCCTCAACCCATCGCCTC 59.855 63.158 0.00 0.00 0.00 4.70
424 425 2.202932 CCTCAACCCATCGCCTCG 60.203 66.667 0.00 0.00 0.00 4.63
425 426 2.892425 CTCAACCCATCGCCTCGC 60.892 66.667 0.00 0.00 0.00 5.03
438 439 4.753877 CTCGCGCTGTTCCGACGA 62.754 66.667 5.56 0.00 36.18 4.20
439 440 4.753877 TCGCGCTGTTCCGACGAG 62.754 66.667 5.56 0.00 34.04 4.18
440 441 4.753877 CGCGCTGTTCCGACGAGA 62.754 66.667 5.56 0.00 32.44 4.04
441 442 2.202623 GCGCTGTTCCGACGAGAT 60.203 61.111 0.00 0.00 0.00 2.75
442 443 2.508891 GCGCTGTTCCGACGAGATG 61.509 63.158 0.00 0.00 0.00 2.90
443 444 2.508891 CGCTGTTCCGACGAGATGC 61.509 63.158 0.00 0.00 0.00 3.91
444 445 2.167861 GCTGTTCCGACGAGATGCC 61.168 63.158 0.00 0.00 0.00 4.40
445 446 1.513158 CTGTTCCGACGAGATGCCT 59.487 57.895 0.00 0.00 0.00 4.75
446 447 0.526524 CTGTTCCGACGAGATGCCTC 60.527 60.000 0.00 0.00 36.08 4.70
447 448 1.227002 GTTCCGACGAGATGCCTCC 60.227 63.158 0.00 0.00 36.04 4.30
448 449 2.771639 TTCCGACGAGATGCCTCCG 61.772 63.158 0.00 0.00 36.04 4.63
449 450 4.271816 CCGACGAGATGCCTCCGG 62.272 72.222 0.00 0.00 37.70 5.14
450 451 4.271816 CGACGAGATGCCTCCGGG 62.272 72.222 0.00 0.00 36.04 5.73
460 461 3.839432 CCTCCGGGCCTCGTCTTC 61.839 72.222 0.84 0.00 37.11 2.87
461 462 4.194720 CTCCGGGCCTCGTCTTCG 62.195 72.222 0.84 0.00 37.11 3.79
470 471 2.359602 TCGTCTTCGGCGAGGACT 60.360 61.111 37.43 0.00 36.68 3.85
471 472 1.078918 TCGTCTTCGGCGAGGACTA 60.079 57.895 37.43 29.39 36.68 2.59
472 473 1.062206 CGTCTTCGGCGAGGACTAC 59.938 63.158 37.43 20.90 36.68 2.73
473 474 1.367599 CGTCTTCGGCGAGGACTACT 61.368 60.000 37.43 0.00 36.68 2.57
474 475 0.099082 GTCTTCGGCGAGGACTACTG 59.901 60.000 35.49 10.72 36.06 2.74
475 476 1.226717 CTTCGGCGAGGACTACTGC 60.227 63.158 14.40 0.00 0.00 4.40
476 477 2.615262 CTTCGGCGAGGACTACTGCC 62.615 65.000 14.40 0.00 38.92 4.85
477 478 3.141488 CGGCGAGGACTACTGCCT 61.141 66.667 0.00 0.00 39.64 4.75
478 479 2.496817 GGCGAGGACTACTGCCTG 59.503 66.667 0.00 0.00 39.10 4.85
479 480 2.496817 GCGAGGACTACTGCCTGG 59.503 66.667 0.00 0.00 35.44 4.45
480 481 2.052690 GCGAGGACTACTGCCTGGA 61.053 63.158 0.00 0.00 35.44 3.86
481 482 2.010582 GCGAGGACTACTGCCTGGAG 62.011 65.000 0.00 0.00 35.44 3.86
482 483 1.388065 CGAGGACTACTGCCTGGAGG 61.388 65.000 0.00 0.00 35.44 4.30
483 484 0.033011 GAGGACTACTGCCTGGAGGA 60.033 60.000 0.00 0.00 35.44 3.71
484 485 0.639392 AGGACTACTGCCTGGAGGAT 59.361 55.000 0.00 0.00 37.39 3.24
485 486 1.008938 AGGACTACTGCCTGGAGGATT 59.991 52.381 0.00 0.00 37.39 3.01
486 487 1.840635 GGACTACTGCCTGGAGGATTT 59.159 52.381 0.00 0.00 37.39 2.17
487 488 2.420687 GGACTACTGCCTGGAGGATTTG 60.421 54.545 0.00 0.00 37.39 2.32
488 489 1.561542 ACTACTGCCTGGAGGATTTGG 59.438 52.381 0.00 0.00 37.39 3.28
489 490 0.918983 TACTGCCTGGAGGATTTGGG 59.081 55.000 0.00 0.00 37.39 4.12
490 491 1.755783 CTGCCTGGAGGATTTGGGC 60.756 63.158 0.00 0.00 42.73 5.36
491 492 2.360191 GCCTGGAGGATTTGGGCA 59.640 61.111 0.00 0.00 42.08 5.36
492 493 1.305213 GCCTGGAGGATTTGGGCAA 60.305 57.895 0.00 0.00 42.08 4.52
493 494 1.325476 GCCTGGAGGATTTGGGCAAG 61.325 60.000 0.00 0.00 42.08 4.01
494 495 1.325476 CCTGGAGGATTTGGGCAAGC 61.325 60.000 0.00 0.00 37.39 4.01
495 496 0.612732 CTGGAGGATTTGGGCAAGCA 60.613 55.000 0.00 0.00 0.00 3.91
496 497 0.612732 TGGAGGATTTGGGCAAGCAG 60.613 55.000 0.00 0.00 0.00 4.24
497 498 1.514553 GAGGATTTGGGCAAGCAGC 59.485 57.895 0.00 0.00 44.65 5.25
506 507 3.105659 GCAAGCAGCGGAGGATTC 58.894 61.111 0.00 0.00 0.00 2.52
507 508 2.817423 GCAAGCAGCGGAGGATTCG 61.817 63.158 0.00 0.00 42.80 3.34
515 516 2.354773 GGAGGATTCGCCGCGTAG 60.355 66.667 13.39 0.00 43.43 3.51
563 564 2.279120 GGAGAGCATGCTCGTCGG 60.279 66.667 35.50 0.00 46.90 4.79
656 657 2.671070 CCGTTGGGTGATGAGCCT 59.329 61.111 1.13 0.00 40.76 4.58
657 658 1.746615 CCGTTGGGTGATGAGCCTG 60.747 63.158 1.13 0.00 40.76 4.85
664 665 0.753262 GGTGATGAGCCTGTATCCGT 59.247 55.000 0.00 0.00 0.00 4.69
665 666 1.269831 GGTGATGAGCCTGTATCCGTC 60.270 57.143 0.00 0.00 0.00 4.79
671 672 1.065928 GCCTGTATCCGTCTGTCCG 59.934 63.158 0.00 0.00 0.00 4.79
674 675 2.351336 CTGTATCCGTCTGTCCGCCC 62.351 65.000 0.00 0.00 0.00 6.13
675 676 3.214123 TATCCGTCTGTCCGCCCG 61.214 66.667 0.00 0.00 0.00 6.13
707 717 3.000727 CCGTGTTCCCTACTCATCAAAC 58.999 50.000 0.00 0.00 0.00 2.93
745 773 2.577606 ATTCACGTCCATTTGGGTCA 57.422 45.000 0.00 0.00 38.11 4.02
783 818 2.026729 TCTGGTCCGGACATTTGCAATA 60.027 45.455 34.40 11.71 0.00 1.90
810 845 0.039527 CCCTAAACAAAGCACGCACC 60.040 55.000 0.00 0.00 0.00 5.01
853 888 3.054139 CCGTATCCATCCATCCATCCATT 60.054 47.826 0.00 0.00 0.00 3.16
855 890 4.080695 CGTATCCATCCATCCATCCATTCT 60.081 45.833 0.00 0.00 0.00 2.40
856 891 4.587976 ATCCATCCATCCATCCATTCTC 57.412 45.455 0.00 0.00 0.00 2.87
857 892 3.605879 TCCATCCATCCATCCATTCTCT 58.394 45.455 0.00 0.00 0.00 3.10
863 898 5.382616 TCCATCCATCCATTCTCTTCATTG 58.617 41.667 0.00 0.00 0.00 2.82
865 900 3.208594 TCCATCCATTCTCTTCATTGCG 58.791 45.455 0.00 0.00 0.00 4.85
869 938 2.011947 CCATTCTCTTCATTGCGCTCA 58.988 47.619 9.73 0.00 0.00 4.26
887 956 4.725754 CGCTCAATGCTCTTTTATTTCGAC 59.274 41.667 0.00 0.00 40.11 4.20
896 965 5.449177 GCTCTTTTATTTCGACCCAATCCAG 60.449 44.000 0.00 0.00 0.00 3.86
921 995 9.030452 AGATCCATCCAACTACTACTAATGATC 57.970 37.037 0.00 0.00 0.00 2.92
954 1034 9.273016 CCTGTATATTATAGGAACCAAACACTG 57.727 37.037 0.00 0.00 39.21 3.66
984 1064 3.261643 CGATATCCCCATCACCAATCAGA 59.738 47.826 0.00 0.00 0.00 3.27
985 1065 4.263025 CGATATCCCCATCACCAATCAGAA 60.263 45.833 0.00 0.00 0.00 3.02
1566 1736 0.602638 TGCATCGGGACAGTTGACAC 60.603 55.000 0.00 0.00 0.00 3.67
1601 1771 3.163594 CAACTTTTTCTTAGCCGATGCG 58.836 45.455 0.00 0.00 44.33 4.73
1786 2462 8.918202 ATATCCATGCGTTAATAAGGAAAAGA 57.082 30.769 0.00 0.00 0.00 2.52
1787 2463 7.639113 ATCCATGCGTTAATAAGGAAAAGAA 57.361 32.000 0.00 0.00 0.00 2.52
1964 2640 7.431249 AGTTATCTAGATGCATGCCATTTTTG 58.569 34.615 16.68 0.00 33.29 2.44
1980 2656 7.777440 TGCCATTTTTGGTTATTTTTCTCCTTT 59.223 29.630 0.00 0.00 0.00 3.11
2077 2753 5.025986 TGAAATTTCCTACGACGCTTTTC 57.974 39.130 15.48 0.00 0.00 2.29
2108 2784 8.747666 TGTTTTGAATAGTTACAACATTTTCGC 58.252 29.630 0.00 0.00 0.00 4.70
2124 2800 5.713792 TTTTCGCTGGACATTTTTATGGA 57.286 34.783 0.00 0.00 0.00 3.41
2245 2924 7.706179 CACATTTTGATGTAACAGTTGGAAAGT 59.294 33.333 0.00 0.00 32.74 2.66
2268 2947 2.859165 TTCTTGAACTAGTGGCCCAG 57.141 50.000 0.00 0.00 0.00 4.45
2278 2957 2.767644 AGTGGCCCAGTTTTTAAGGT 57.232 45.000 0.00 0.00 0.00 3.50
2484 3165 5.649782 ACAAAATGTTCCTTAGCATGGAG 57.350 39.130 0.00 0.00 34.76 3.86
2628 3309 4.475747 ACCTCTAGAACAGACTAGCTACCT 59.524 45.833 0.00 0.00 39.50 3.08
2711 3392 6.766429 AGAGATGCTGCATAGAAACATATCA 58.234 36.000 16.23 0.00 32.74 2.15
2739 3420 1.812922 CCAAGTGAGCAGCGCTAGG 60.813 63.158 10.99 0.00 39.88 3.02
2743 3700 4.777854 TGAGCAGCGCTAGGGGGA 62.778 66.667 10.99 0.00 39.88 4.81
2745 3702 2.770048 AGCAGCGCTAGGGGGATT 60.770 61.111 10.99 0.00 36.99 3.01
2904 3862 1.518056 CGCATGTCACACTTTGGGCT 61.518 55.000 0.00 0.00 0.00 5.19
2923 3881 0.675083 TCACCCTCGCGTTTTCAGTA 59.325 50.000 5.77 0.00 0.00 2.74
3016 3976 6.911250 TTTCCCTAGTTTTGGAGGATTTTC 57.089 37.500 0.00 0.00 34.46 2.29
3048 4008 5.304195 GAAGCAGCACTTTTTCGTGAGAAC 61.304 45.833 0.00 0.00 44.58 3.01
3207 4181 3.332761 TGTTTGTGACTCATTTGCGTC 57.667 42.857 0.00 0.00 0.00 5.19
3293 4268 2.878406 GTGCCTGTGAGAAAGCTTACAA 59.122 45.455 0.00 0.00 39.74 2.41
3701 4689 8.150296 TGTGATCTAGTTTCAAAGATCTCAACA 58.850 33.333 12.25 7.06 43.96 3.33
3724 4712 7.209475 ACACGAGAAATCCAACAATGAAAATT 58.791 30.769 0.00 0.00 0.00 1.82
3725 4713 8.356657 ACACGAGAAATCCAACAATGAAAATTA 58.643 29.630 0.00 0.00 0.00 1.40
3740 4728 7.732222 ATGAAAATTATTAGGGCTTTGGACA 57.268 32.000 0.00 0.00 0.00 4.02
3839 4830 6.282930 GGGCAAATATAGTGCATCATTTGTT 58.717 36.000 18.35 0.00 44.07 2.83
3862 4853 0.398318 AACAGAGAAGGTGGGAGTGC 59.602 55.000 0.00 0.00 0.00 4.40
3874 4865 1.707989 TGGGAGTGCCATTTACAAGGA 59.292 47.619 0.00 0.00 35.15 3.36
3879 4870 5.193679 GGAGTGCCATTTACAAGGATAACT 58.806 41.667 0.00 0.00 0.00 2.24
4055 5047 3.299340 CGGAAGCACCTATATAACGCT 57.701 47.619 0.00 0.00 36.31 5.07
4161 5154 0.673644 ACTGGTGCACCGTATCAAGC 60.674 55.000 30.07 4.16 39.43 4.01
4162 5155 0.673333 CTGGTGCACCGTATCAAGCA 60.673 55.000 30.07 8.97 39.43 3.91
4168 5161 1.943968 GCACCGTATCAAGCAGGTTCA 60.944 52.381 0.00 0.00 34.25 3.18
4708 5810 1.565759 TCCATGCTGACTAAATGGGCT 59.434 47.619 1.32 0.00 41.09 5.19
4721 5823 0.468029 ATGGGCTCGCCATAAAAGGG 60.468 55.000 10.51 0.00 37.98 3.95
4726 5828 2.210961 GCTCGCCATAAAAGGGACTAC 58.789 52.381 0.00 0.00 38.49 2.73
4786 5889 1.753073 CGTCTAACCGGAAGTACCCAT 59.247 52.381 9.46 0.00 34.64 4.00
4973 6078 0.678048 GAGGTGCGGCTCCAAGAAAT 60.678 55.000 21.85 1.01 0.00 2.17
5068 6184 5.134725 AGCACCAATTGAAAGGGAGATAT 57.865 39.130 7.12 0.00 0.00 1.63
5187 6303 7.136119 TCGTTGTATTGATTCCTTTGTTTGAC 58.864 34.615 0.00 0.00 0.00 3.18
5316 6433 6.546403 AGGAAACCTACTTTCTTCCTCAAAAC 59.454 38.462 0.00 0.00 43.35 2.43
5382 6500 0.824109 TAGAGATGGGGTGACTTGCG 59.176 55.000 0.00 0.00 0.00 4.85
5410 6528 6.672147 AGATGGACGAAGAAAAATCAAAGTG 58.328 36.000 0.00 0.00 0.00 3.16
5592 6711 7.123098 TGCATTCTCAAATAGTCAACCAATGAT 59.877 33.333 0.00 0.00 40.97 2.45
5892 7018 1.134007 CCCAGAGCAGCATGTTGGATA 60.134 52.381 11.80 0.00 39.31 2.59
5988 7114 1.842562 CATCCATGACCCAGGAAGAGT 59.157 52.381 0.00 0.00 37.48 3.24
6477 7603 7.596248 CAGAAACTAGAATCAATTTGTTGGTGG 59.404 37.037 0.00 0.00 0.00 4.61
6515 7641 8.328758 TCATTACCTTGTTCCATTTAGATGAGT 58.671 33.333 0.00 0.00 35.16 3.41
6605 7731 6.658816 TGTTTGGCATATGTGTGAACTCTTAT 59.341 34.615 4.29 0.00 0.00 1.73
6631 7759 5.991933 TTGCCTAATACATTTCTGCCAAA 57.008 34.783 0.00 0.00 0.00 3.28
6655 7783 5.499139 TCCTCATAATTTCATTTCGCACC 57.501 39.130 0.00 0.00 0.00 5.01
6943 8081 5.278957 GCATTTAATATCTGGCAACCGGAAT 60.279 40.000 9.46 0.00 42.74 3.01
6949 8087 6.976934 ATATCTGGCAACCGGAATAAATTT 57.023 33.333 9.46 0.00 42.74 1.82
7059 8197 8.050778 TCCAGCGAGTGAAATAAAATGTTTAT 57.949 30.769 0.00 0.00 0.00 1.40
7088 8226 7.835181 AGTTAGTTGAGTATACACTAGGAAGCT 59.165 37.037 5.50 0.00 34.21 3.74
7093 8231 6.129874 TGAGTATACACTAGGAAGCTGTCAT 58.870 40.000 5.50 0.00 34.21 3.06
7185 8323 7.483307 ACAACATAATCATTTAGATGTGTGCC 58.517 34.615 0.00 0.00 36.84 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.691508 AGCAAATTTGGGACTAAAATGAGTC 58.308 36.000 19.47 0.00 44.39 3.36
1 2 6.570378 CGAGCAAATTTGGGACTAAAATGAGT 60.570 38.462 19.47 0.00 0.00 3.41
3 4 5.708948 CGAGCAAATTTGGGACTAAAATGA 58.291 37.500 19.47 0.00 0.00 2.57
4 5 4.327087 GCGAGCAAATTTGGGACTAAAATG 59.673 41.667 19.47 0.00 0.00 2.32
5 6 4.494484 GCGAGCAAATTTGGGACTAAAAT 58.506 39.130 19.47 0.00 0.00 1.82
6 7 3.610585 CGCGAGCAAATTTGGGACTAAAA 60.611 43.478 19.47 0.00 0.00 1.52
7 8 2.095466 CGCGAGCAAATTTGGGACTAAA 60.095 45.455 19.47 0.00 0.00 1.85
8 9 1.466950 CGCGAGCAAATTTGGGACTAA 59.533 47.619 19.47 0.00 0.00 2.24
9 10 1.083489 CGCGAGCAAATTTGGGACTA 58.917 50.000 19.47 0.00 0.00 2.59
10 11 0.605319 TCGCGAGCAAATTTGGGACT 60.605 50.000 19.47 8.29 0.00 3.85
11 12 0.451783 ATCGCGAGCAAATTTGGGAC 59.548 50.000 16.66 3.39 0.00 4.46
12 13 1.173043 AATCGCGAGCAAATTTGGGA 58.827 45.000 16.66 7.76 0.00 4.37
13 14 1.655099 CAAATCGCGAGCAAATTTGGG 59.345 47.619 16.66 2.38 36.95 4.12
15 16 2.594321 TCCAAATCGCGAGCAAATTTG 58.406 42.857 20.00 20.00 39.16 2.32
16 17 3.438360 GATCCAAATCGCGAGCAAATTT 58.562 40.909 16.66 6.91 0.00 1.82
17 18 2.223572 GGATCCAAATCGCGAGCAAATT 60.224 45.455 16.66 0.00 32.24 1.82
18 19 1.334869 GGATCCAAATCGCGAGCAAAT 59.665 47.619 16.66 4.14 32.24 2.32
19 20 0.732571 GGATCCAAATCGCGAGCAAA 59.267 50.000 16.66 0.00 32.24 3.68
20 21 1.428370 CGGATCCAAATCGCGAGCAA 61.428 55.000 16.66 0.00 32.24 3.91
21 22 1.882625 CGGATCCAAATCGCGAGCA 60.883 57.895 16.66 0.00 32.24 4.26
22 23 0.596600 TACGGATCCAAATCGCGAGC 60.597 55.000 16.66 0.00 32.95 5.03
23 24 1.409412 CTACGGATCCAAATCGCGAG 58.591 55.000 16.66 0.00 32.95 5.03
24 25 0.596600 GCTACGGATCCAAATCGCGA 60.597 55.000 13.09 13.09 32.95 5.87
25 26 0.874175 TGCTACGGATCCAAATCGCG 60.874 55.000 13.41 0.00 34.07 5.87
26 27 0.861837 CTGCTACGGATCCAAATCGC 59.138 55.000 13.41 7.03 32.24 4.58
27 28 2.128035 GTCTGCTACGGATCCAAATCG 58.872 52.381 13.41 0.00 32.24 3.34
28 29 2.866762 GTGTCTGCTACGGATCCAAATC 59.133 50.000 13.41 0.00 0.00 2.17
29 30 2.236146 TGTGTCTGCTACGGATCCAAAT 59.764 45.455 13.41 0.00 0.00 2.32
30 31 1.621317 TGTGTCTGCTACGGATCCAAA 59.379 47.619 13.41 0.00 0.00 3.28
31 32 1.262417 TGTGTCTGCTACGGATCCAA 58.738 50.000 13.41 0.00 0.00 3.53
32 33 1.262417 TTGTGTCTGCTACGGATCCA 58.738 50.000 13.41 0.00 0.00 3.41
33 34 2.000447 GTTTGTGTCTGCTACGGATCC 59.000 52.381 0.00 0.00 0.00 3.36
34 35 2.000447 GGTTTGTGTCTGCTACGGATC 59.000 52.381 0.00 0.00 0.00 3.36
35 36 1.671850 CGGTTTGTGTCTGCTACGGAT 60.672 52.381 0.00 0.00 0.00 4.18
36 37 0.319211 CGGTTTGTGTCTGCTACGGA 60.319 55.000 0.00 0.00 0.00 4.69
37 38 1.289109 CCGGTTTGTGTCTGCTACGG 61.289 60.000 0.00 0.00 0.00 4.02
38 39 0.319211 TCCGGTTTGTGTCTGCTACG 60.319 55.000 0.00 0.00 0.00 3.51
39 40 1.145803 GTCCGGTTTGTGTCTGCTAC 58.854 55.000 0.00 0.00 0.00 3.58
40 41 0.319211 CGTCCGGTTTGTGTCTGCTA 60.319 55.000 0.00 0.00 0.00 3.49
41 42 1.594293 CGTCCGGTTTGTGTCTGCT 60.594 57.895 0.00 0.00 0.00 4.24
42 43 1.433837 AACGTCCGGTTTGTGTCTGC 61.434 55.000 0.00 0.00 34.41 4.26
43 44 0.580104 GAACGTCCGGTTTGTGTCTG 59.420 55.000 0.00 0.00 39.50 3.51
44 45 0.462789 AGAACGTCCGGTTTGTGTCT 59.537 50.000 0.00 2.54 39.50 3.41
45 46 0.857287 GAGAACGTCCGGTTTGTGTC 59.143 55.000 0.00 0.38 39.50 3.67
46 47 0.462789 AGAGAACGTCCGGTTTGTGT 59.537 50.000 0.00 0.00 39.50 3.72
47 48 2.427232 TAGAGAACGTCCGGTTTGTG 57.573 50.000 0.00 0.00 39.50 3.33
48 49 2.298163 ACATAGAGAACGTCCGGTTTGT 59.702 45.455 0.00 0.00 39.50 2.83
49 50 2.921754 GACATAGAGAACGTCCGGTTTG 59.078 50.000 0.00 0.00 39.50 2.93
50 51 2.094338 GGACATAGAGAACGTCCGGTTT 60.094 50.000 0.00 0.00 39.86 3.27
51 52 1.475682 GGACATAGAGAACGTCCGGTT 59.524 52.381 0.00 0.00 39.86 4.44
52 53 1.101331 GGACATAGAGAACGTCCGGT 58.899 55.000 0.00 0.00 39.86 5.28
53 54 3.940723 GGACATAGAGAACGTCCGG 57.059 57.895 0.00 0.00 39.86 5.14
56 57 2.452105 GCGAAGGACATAGAGAACGTC 58.548 52.381 0.00 0.00 0.00 4.34
57 58 1.202154 CGCGAAGGACATAGAGAACGT 60.202 52.381 0.00 0.00 0.00 3.99
58 59 1.202154 ACGCGAAGGACATAGAGAACG 60.202 52.381 15.93 0.00 0.00 3.95
59 60 2.452105 GACGCGAAGGACATAGAGAAC 58.548 52.381 15.93 0.00 0.00 3.01
60 61 1.063616 CGACGCGAAGGACATAGAGAA 59.936 52.381 15.93 0.00 0.00 2.87
61 62 0.656259 CGACGCGAAGGACATAGAGA 59.344 55.000 15.93 0.00 0.00 3.10
62 63 0.317103 CCGACGCGAAGGACATAGAG 60.317 60.000 15.93 0.00 0.00 2.43
63 64 1.725665 CCGACGCGAAGGACATAGA 59.274 57.895 15.93 0.00 0.00 1.98
64 65 1.944676 GCCGACGCGAAGGACATAG 60.945 63.158 24.06 0.00 0.00 2.23
65 66 2.103538 GCCGACGCGAAGGACATA 59.896 61.111 24.06 0.00 0.00 2.29
66 67 3.760035 AGCCGACGCGAAGGACAT 61.760 61.111 24.06 9.37 41.18 3.06
67 68 4.717629 CAGCCGACGCGAAGGACA 62.718 66.667 24.06 0.00 41.18 4.02
68 69 4.719369 ACAGCCGACGCGAAGGAC 62.719 66.667 24.06 16.09 41.18 3.85
69 70 4.717629 CACAGCCGACGCGAAGGA 62.718 66.667 24.06 0.00 41.18 3.36
71 72 3.470567 GACACAGCCGACGCGAAG 61.471 66.667 15.93 5.75 41.18 3.79
80 81 3.044059 GAATGCAGCGGACACAGCC 62.044 63.158 0.00 0.00 34.64 4.85
81 82 2.482374 GAATGCAGCGGACACAGC 59.518 61.111 0.00 0.00 0.00 4.40
82 83 1.690283 CTCGAATGCAGCGGACACAG 61.690 60.000 11.22 0.00 0.00 3.66
83 84 1.737735 CTCGAATGCAGCGGACACA 60.738 57.895 11.22 0.00 0.00 3.72
84 85 3.084579 CTCGAATGCAGCGGACAC 58.915 61.111 11.22 0.00 0.00 3.67
85 86 2.815211 GCTCGAATGCAGCGGACA 60.815 61.111 11.22 0.00 0.00 4.02
86 87 3.567797 GGCTCGAATGCAGCGGAC 61.568 66.667 11.22 4.64 37.81 4.79
87 88 4.838152 GGGCTCGAATGCAGCGGA 62.838 66.667 11.22 0.00 37.81 5.54
90 91 3.267860 CTCGGGCTCGAATGCAGC 61.268 66.667 11.25 0.00 45.47 5.25
91 92 3.267860 GCTCGGGCTCGAATGCAG 61.268 66.667 11.25 0.00 45.47 4.41
92 93 4.838152 GGCTCGGGCTCGAATGCA 62.838 66.667 20.24 0.00 45.47 3.96
102 103 3.019003 AATGACAGACGGGCTCGGG 62.019 63.158 12.42 1.14 41.39 5.14
103 104 1.811266 CAATGACAGACGGGCTCGG 60.811 63.158 12.42 0.00 41.39 4.63
104 105 0.179100 ATCAATGACAGACGGGCTCG 60.179 55.000 3.27 3.27 43.02 5.03
105 106 2.159099 TGTATCAATGACAGACGGGCTC 60.159 50.000 0.00 0.00 0.00 4.70
106 107 1.831106 TGTATCAATGACAGACGGGCT 59.169 47.619 0.00 0.00 0.00 5.19
107 108 2.309528 TGTATCAATGACAGACGGGC 57.690 50.000 0.00 0.00 0.00 6.13
108 109 3.198068 CCTTGTATCAATGACAGACGGG 58.802 50.000 0.00 0.00 0.00 5.28
109 110 3.198068 CCCTTGTATCAATGACAGACGG 58.802 50.000 0.00 0.00 0.00 4.79
110 111 3.198068 CCCCTTGTATCAATGACAGACG 58.802 50.000 0.00 0.00 0.00 4.18
111 112 3.545703 CCCCCTTGTATCAATGACAGAC 58.454 50.000 0.00 0.00 0.00 3.51
112 113 3.931907 CCCCCTTGTATCAATGACAGA 57.068 47.619 0.00 0.00 0.00 3.41
133 134 2.894387 GAGATCTGTGGGCTGCGC 60.894 66.667 10.06 10.06 0.00 6.09
134 135 2.202987 GGAGATCTGTGGGCTGCG 60.203 66.667 0.00 0.00 0.00 5.18
135 136 2.191641 GGGAGATCTGTGGGCTGC 59.808 66.667 0.00 0.00 0.00 5.25
136 137 1.277580 AAGGGGAGATCTGTGGGCTG 61.278 60.000 0.00 0.00 0.00 4.85
137 138 0.985490 GAAGGGGAGATCTGTGGGCT 60.985 60.000 0.00 0.00 0.00 5.19
138 139 0.985490 AGAAGGGGAGATCTGTGGGC 60.985 60.000 0.00 0.00 0.00 5.36
139 140 1.127343 GAGAAGGGGAGATCTGTGGG 58.873 60.000 0.00 0.00 0.00 4.61
140 141 2.038659 GAGAGAAGGGGAGATCTGTGG 58.961 57.143 0.00 0.00 0.00 4.17
141 142 2.958355 GAGAGAGAAGGGGAGATCTGTG 59.042 54.545 0.00 0.00 0.00 3.66
142 143 2.858768 AGAGAGAGAAGGGGAGATCTGT 59.141 50.000 0.00 0.00 0.00 3.41
143 144 3.139025 AGAGAGAGAGAAGGGGAGATCTG 59.861 52.174 0.00 0.00 0.00 2.90
144 145 3.139025 CAGAGAGAGAGAAGGGGAGATCT 59.861 52.174 0.00 0.00 0.00 2.75
145 146 3.117512 ACAGAGAGAGAGAAGGGGAGATC 60.118 52.174 0.00 0.00 0.00 2.75
146 147 2.858768 ACAGAGAGAGAGAAGGGGAGAT 59.141 50.000 0.00 0.00 0.00 2.75
147 148 2.241176 GACAGAGAGAGAGAAGGGGAGA 59.759 54.545 0.00 0.00 0.00 3.71
148 149 2.242196 AGACAGAGAGAGAGAAGGGGAG 59.758 54.545 0.00 0.00 0.00 4.30
149 150 2.241176 GAGACAGAGAGAGAGAAGGGGA 59.759 54.545 0.00 0.00 0.00 4.81
150 151 2.654863 GAGACAGAGAGAGAGAAGGGG 58.345 57.143 0.00 0.00 0.00 4.79
151 152 2.242196 AGGAGACAGAGAGAGAGAAGGG 59.758 54.545 0.00 0.00 0.00 3.95
152 153 3.282021 CAGGAGACAGAGAGAGAGAAGG 58.718 54.545 0.00 0.00 0.00 3.46
153 154 2.684881 GCAGGAGACAGAGAGAGAGAAG 59.315 54.545 0.00 0.00 0.00 2.85
154 155 2.620367 GGCAGGAGACAGAGAGAGAGAA 60.620 54.545 0.00 0.00 0.00 2.87
155 156 1.064758 GGCAGGAGACAGAGAGAGAGA 60.065 57.143 0.00 0.00 0.00 3.10
156 157 1.340893 TGGCAGGAGACAGAGAGAGAG 60.341 57.143 0.00 0.00 0.00 3.20
157 158 0.701147 TGGCAGGAGACAGAGAGAGA 59.299 55.000 0.00 0.00 0.00 3.10
158 159 1.409790 CATGGCAGGAGACAGAGAGAG 59.590 57.143 0.00 0.00 35.18 3.20
159 160 1.006400 TCATGGCAGGAGACAGAGAGA 59.994 52.381 0.00 0.00 35.18 3.10
160 161 1.136695 GTCATGGCAGGAGACAGAGAG 59.863 57.143 0.25 0.00 35.18 3.20
161 162 1.189752 GTCATGGCAGGAGACAGAGA 58.810 55.000 0.25 0.00 35.18 3.10
162 163 0.177604 GGTCATGGCAGGAGACAGAG 59.822 60.000 0.25 0.00 35.18 3.35
163 164 1.267574 GGGTCATGGCAGGAGACAGA 61.268 60.000 0.25 0.00 35.18 3.41
164 165 1.222936 GGGTCATGGCAGGAGACAG 59.777 63.158 0.25 0.00 35.18 3.51
165 166 1.133181 TTGGGTCATGGCAGGAGACA 61.133 55.000 0.25 1.37 37.03 3.41
166 167 0.257039 ATTGGGTCATGGCAGGAGAC 59.743 55.000 0.25 5.51 0.00 3.36
167 168 0.256752 CATTGGGTCATGGCAGGAGA 59.743 55.000 0.25 0.00 0.00 3.71
168 169 0.754217 CCATTGGGTCATGGCAGGAG 60.754 60.000 0.25 0.00 0.00 3.69
169 170 1.307309 CCATTGGGTCATGGCAGGA 59.693 57.895 0.00 0.00 0.00 3.86
170 171 1.759299 CCCATTGGGTCATGGCAGG 60.759 63.158 14.10 0.00 38.25 4.85
171 172 2.428925 GCCCATTGGGTCATGGCAG 61.429 63.158 22.82 0.00 46.51 4.85
172 173 2.364056 GCCCATTGGGTCATGGCA 60.364 61.111 22.82 0.00 46.51 4.92
173 174 3.530260 CGCCCATTGGGTCATGGC 61.530 66.667 22.82 6.45 46.51 4.40
174 175 3.530260 GCGCCCATTGGGTCATGG 61.530 66.667 22.82 0.87 46.51 3.66
175 176 3.891400 CGCGCCCATTGGGTCATG 61.891 66.667 22.82 11.50 46.51 3.07
176 177 4.108299 TCGCGCCCATTGGGTCAT 62.108 61.111 22.82 0.00 46.51 3.06
179 180 4.652131 TTGTCGCGCCCATTGGGT 62.652 61.111 22.82 0.00 46.51 4.51
181 182 3.039202 GAGTTGTCGCGCCCATTGG 62.039 63.158 0.00 0.00 0.00 3.16
182 183 2.480555 GAGTTGTCGCGCCCATTG 59.519 61.111 0.00 0.00 0.00 2.82
183 184 2.746277 GGAGTTGTCGCGCCCATT 60.746 61.111 0.00 0.00 0.00 3.16
184 185 3.545124 TTGGAGTTGTCGCGCCCAT 62.545 57.895 0.00 0.00 0.00 4.00
185 186 4.243008 TTGGAGTTGTCGCGCCCA 62.243 61.111 0.00 0.00 0.00 5.36
186 187 3.723348 GTTGGAGTTGTCGCGCCC 61.723 66.667 0.00 0.00 0.00 6.13
187 188 4.072088 CGTTGGAGTTGTCGCGCC 62.072 66.667 0.00 0.00 0.00 6.53
188 189 4.072088 CCGTTGGAGTTGTCGCGC 62.072 66.667 0.00 0.00 0.00 6.86
189 190 4.072088 GCCGTTGGAGTTGTCGCG 62.072 66.667 0.00 0.00 0.00 5.87
190 191 4.072088 CGCCGTTGGAGTTGTCGC 62.072 66.667 0.00 0.00 0.00 5.19
191 192 2.355363 TCGCCGTTGGAGTTGTCG 60.355 61.111 0.00 0.00 0.00 4.35
192 193 2.654912 CGTCGCCGTTGGAGTTGTC 61.655 63.158 0.00 0.00 0.00 3.18
193 194 2.660552 CGTCGCCGTTGGAGTTGT 60.661 61.111 0.00 0.00 0.00 3.32
194 195 3.411351 CCGTCGCCGTTGGAGTTG 61.411 66.667 0.00 0.00 0.00 3.16
195 196 4.675029 CCCGTCGCCGTTGGAGTT 62.675 66.667 0.00 0.00 0.00 3.01
223 224 3.694538 ATTGTTGCCCCGCCTTGC 61.695 61.111 0.00 0.00 0.00 4.01
224 225 2.262292 CATTGTTGCCCCGCCTTG 59.738 61.111 0.00 0.00 0.00 3.61
225 226 3.694538 GCATTGTTGCCCCGCCTT 61.695 61.111 0.00 0.00 43.38 4.35
228 229 4.776647 GTCGCATTGTTGCCCCGC 62.777 66.667 0.00 0.00 46.57 6.13
229 230 4.459331 CGTCGCATTGTTGCCCCG 62.459 66.667 0.00 0.00 46.57 5.73
230 231 4.114997 CCGTCGCATTGTTGCCCC 62.115 66.667 0.00 0.00 46.57 5.80
231 232 4.776647 GCCGTCGCATTGTTGCCC 62.777 66.667 0.00 0.00 46.57 5.36
233 234 4.383602 ACGCCGTCGCATTGTTGC 62.384 61.111 0.00 0.00 45.78 4.17
234 235 2.499520 CACGCCGTCGCATTGTTG 60.500 61.111 0.00 0.00 39.84 3.33
235 236 2.663520 TCACGCCGTCGCATTGTT 60.664 55.556 0.00 0.00 39.84 2.83
236 237 3.411351 GTCACGCCGTCGCATTGT 61.411 61.111 0.00 0.00 39.84 2.71
237 238 2.816692 CTTGTCACGCCGTCGCATTG 62.817 60.000 0.00 0.00 39.84 2.82
238 239 2.663520 TTGTCACGCCGTCGCATT 60.664 55.556 0.00 0.00 39.84 3.56
239 240 3.112075 CTTGTCACGCCGTCGCAT 61.112 61.111 0.00 0.00 39.84 4.73
243 244 2.954753 CTTGCCTTGTCACGCCGTC 61.955 63.158 0.00 0.00 0.00 4.79
244 245 2.972505 CTTGCCTTGTCACGCCGT 60.973 61.111 0.00 0.00 0.00 5.68
245 246 2.058829 AAACTTGCCTTGTCACGCCG 62.059 55.000 0.00 0.00 0.00 6.46
246 247 0.594796 CAAACTTGCCTTGTCACGCC 60.595 55.000 0.00 0.00 0.00 5.68
247 248 0.594796 CCAAACTTGCCTTGTCACGC 60.595 55.000 0.00 0.00 0.00 5.34
248 249 0.030638 CCCAAACTTGCCTTGTCACG 59.969 55.000 0.00 0.00 0.00 4.35
249 250 0.249447 GCCCAAACTTGCCTTGTCAC 60.249 55.000 0.00 0.00 0.00 3.67
250 251 1.733402 CGCCCAAACTTGCCTTGTCA 61.733 55.000 0.00 0.00 0.00 3.58
251 252 1.007387 CGCCCAAACTTGCCTTGTC 60.007 57.895 0.00 0.00 0.00 3.18
252 253 0.827507 ATCGCCCAAACTTGCCTTGT 60.828 50.000 0.00 0.00 0.00 3.16
253 254 0.388907 CATCGCCCAAACTTGCCTTG 60.389 55.000 0.00 0.00 0.00 3.61
254 255 1.535204 CCATCGCCCAAACTTGCCTT 61.535 55.000 0.00 0.00 0.00 4.35
255 256 1.978617 CCATCGCCCAAACTTGCCT 60.979 57.895 0.00 0.00 0.00 4.75
256 257 2.573340 CCATCGCCCAAACTTGCC 59.427 61.111 0.00 0.00 0.00 4.52
257 258 2.125952 GCCATCGCCCAAACTTGC 60.126 61.111 0.00 0.00 0.00 4.01
258 259 2.179018 CGCCATCGCCCAAACTTG 59.821 61.111 0.00 0.00 0.00 3.16
291 292 3.881019 TGGAGCTTCCCGACGGAGT 62.881 63.158 17.49 0.00 40.10 3.85
292 293 3.068691 TGGAGCTTCCCGACGGAG 61.069 66.667 17.49 6.87 40.10 4.63
293 294 3.379445 GTGGAGCTTCCCGACGGA 61.379 66.667 17.49 0.00 35.03 4.69
294 295 4.796231 CGTGGAGCTTCCCGACGG 62.796 72.222 6.99 6.99 35.03 4.79
295 296 4.796231 CCGTGGAGCTTCCCGACG 62.796 72.222 0.00 0.00 35.03 5.12
299 300 3.959991 GAGTGCCGTGGAGCTTCCC 62.960 68.421 0.00 0.00 35.03 3.97
300 301 2.435059 GAGTGCCGTGGAGCTTCC 60.435 66.667 0.00 0.00 36.96 3.46
301 302 2.435059 GGAGTGCCGTGGAGCTTC 60.435 66.667 0.00 0.00 0.00 3.86
302 303 2.925170 AGGAGTGCCGTGGAGCTT 60.925 61.111 0.00 0.00 39.96 3.74
303 304 3.699894 CAGGAGTGCCGTGGAGCT 61.700 66.667 0.00 0.00 39.96 4.09
326 327 4.379243 AGAGTGGCCGCGGAACTG 62.379 66.667 31.20 6.79 0.00 3.16
327 328 4.379243 CAGAGTGGCCGCGGAACT 62.379 66.667 33.48 30.09 0.00 3.01
337 338 4.694233 AGCTGCACGCCAGAGTGG 62.694 66.667 1.02 0.00 44.64 4.00
338 339 3.117171 GAGCTGCACGCCAGAGTG 61.117 66.667 1.02 0.00 44.64 3.51
339 340 4.385405 GGAGCTGCACGCCAGAGT 62.385 66.667 0.00 0.00 44.64 3.24
349 350 4.828925 GAGTGGCCTCGGAGCTGC 62.829 72.222 3.32 0.00 0.00 5.25
380 381 3.224007 ATGGTGGGTTGAGGTGCCC 62.224 63.158 0.00 0.00 45.04 5.36
381 382 1.678970 GATGGTGGGTTGAGGTGCC 60.679 63.158 0.00 0.00 0.00 5.01
382 383 2.040544 CGATGGTGGGTTGAGGTGC 61.041 63.158 0.00 0.00 0.00 5.01
383 384 0.673644 GTCGATGGTGGGTTGAGGTG 60.674 60.000 0.00 0.00 0.00 4.00
384 385 1.125093 TGTCGATGGTGGGTTGAGGT 61.125 55.000 0.00 0.00 0.00 3.85
385 386 0.673644 GTGTCGATGGTGGGTTGAGG 60.674 60.000 0.00 0.00 0.00 3.86
386 387 0.673644 GGTGTCGATGGTGGGTTGAG 60.674 60.000 0.00 0.00 0.00 3.02
387 388 1.125093 AGGTGTCGATGGTGGGTTGA 61.125 55.000 0.00 0.00 0.00 3.18
388 389 0.673644 GAGGTGTCGATGGTGGGTTG 60.674 60.000 0.00 0.00 0.00 3.77
389 390 1.677552 GAGGTGTCGATGGTGGGTT 59.322 57.895 0.00 0.00 0.00 4.11
390 391 2.291043 GGAGGTGTCGATGGTGGGT 61.291 63.158 0.00 0.00 0.00 4.51
391 392 1.961180 GAGGAGGTGTCGATGGTGGG 61.961 65.000 0.00 0.00 0.00 4.61
392 393 1.257750 TGAGGAGGTGTCGATGGTGG 61.258 60.000 0.00 0.00 0.00 4.61
393 394 0.608130 TTGAGGAGGTGTCGATGGTG 59.392 55.000 0.00 0.00 0.00 4.17
394 395 0.608640 GTTGAGGAGGTGTCGATGGT 59.391 55.000 0.00 0.00 0.00 3.55
395 396 0.108138 GGTTGAGGAGGTGTCGATGG 60.108 60.000 0.00 0.00 0.00 3.51
396 397 0.108138 GGGTTGAGGAGGTGTCGATG 60.108 60.000 0.00 0.00 0.00 3.84
397 398 0.544357 TGGGTTGAGGAGGTGTCGAT 60.544 55.000 0.00 0.00 0.00 3.59
398 399 0.544357 ATGGGTTGAGGAGGTGTCGA 60.544 55.000 0.00 0.00 0.00 4.20
399 400 0.108138 GATGGGTTGAGGAGGTGTCG 60.108 60.000 0.00 0.00 0.00 4.35
400 401 0.108138 CGATGGGTTGAGGAGGTGTC 60.108 60.000 0.00 0.00 0.00 3.67
401 402 1.983224 CGATGGGTTGAGGAGGTGT 59.017 57.895 0.00 0.00 0.00 4.16
402 403 1.450312 GCGATGGGTTGAGGAGGTG 60.450 63.158 0.00 0.00 0.00 4.00
403 404 2.670148 GGCGATGGGTTGAGGAGGT 61.670 63.158 0.00 0.00 0.00 3.85
404 405 2.190578 GGCGATGGGTTGAGGAGG 59.809 66.667 0.00 0.00 0.00 4.30
405 406 1.144936 GAGGCGATGGGTTGAGGAG 59.855 63.158 0.00 0.00 0.00 3.69
406 407 2.721167 CGAGGCGATGGGTTGAGGA 61.721 63.158 0.00 0.00 0.00 3.71
407 408 2.202932 CGAGGCGATGGGTTGAGG 60.203 66.667 0.00 0.00 0.00 3.86
408 409 2.892425 GCGAGGCGATGGGTTGAG 60.892 66.667 0.00 0.00 0.00 3.02
421 422 4.753877 TCGTCGGAACAGCGCGAG 62.754 66.667 12.10 3.23 0.00 5.03
422 423 4.753877 CTCGTCGGAACAGCGCGA 62.754 66.667 12.10 0.00 0.00 5.87
423 424 4.753877 TCTCGTCGGAACAGCGCG 62.754 66.667 0.00 0.00 0.00 6.86
424 425 2.202623 ATCTCGTCGGAACAGCGC 60.203 61.111 0.00 0.00 0.00 5.92
425 426 2.508891 GCATCTCGTCGGAACAGCG 61.509 63.158 0.00 0.00 0.00 5.18
426 427 2.167861 GGCATCTCGTCGGAACAGC 61.168 63.158 0.00 0.00 0.00 4.40
427 428 0.526524 GAGGCATCTCGTCGGAACAG 60.527 60.000 0.00 0.00 0.00 3.16
428 429 1.511305 GAGGCATCTCGTCGGAACA 59.489 57.895 0.00 0.00 0.00 3.18
429 430 1.227002 GGAGGCATCTCGTCGGAAC 60.227 63.158 0.00 0.00 40.85 3.62
430 431 2.771639 CGGAGGCATCTCGTCGGAA 61.772 63.158 0.00 0.00 40.85 4.30
431 432 3.209812 CGGAGGCATCTCGTCGGA 61.210 66.667 0.00 0.00 40.85 4.55
432 433 4.271816 CCGGAGGCATCTCGTCGG 62.272 72.222 0.00 0.00 46.14 4.79
444 445 4.194720 CGAAGACGAGGCCCGGAG 62.195 72.222 16.44 0.00 43.93 4.63
453 454 1.078918 TAGTCCTCGCCGAAGACGA 60.079 57.895 9.98 2.42 42.66 4.20
454 455 1.062206 GTAGTCCTCGCCGAAGACG 59.938 63.158 9.98 0.00 35.65 4.18
455 456 0.099082 CAGTAGTCCTCGCCGAAGAC 59.901 60.000 7.77 7.77 0.00 3.01
456 457 1.654954 GCAGTAGTCCTCGCCGAAGA 61.655 60.000 0.00 0.00 0.00 2.87
457 458 1.226717 GCAGTAGTCCTCGCCGAAG 60.227 63.158 0.00 0.00 0.00 3.79
458 459 2.707849 GGCAGTAGTCCTCGCCGAA 61.708 63.158 0.00 0.00 34.26 4.30
459 460 3.138798 GGCAGTAGTCCTCGCCGA 61.139 66.667 0.00 0.00 34.26 5.54
461 462 2.496817 CAGGCAGTAGTCCTCGCC 59.503 66.667 0.00 0.00 45.23 5.54
462 463 2.010582 CTCCAGGCAGTAGTCCTCGC 62.011 65.000 0.00 0.00 0.00 5.03
463 464 1.388065 CCTCCAGGCAGTAGTCCTCG 61.388 65.000 0.00 0.00 0.00 4.63
464 465 0.033011 TCCTCCAGGCAGTAGTCCTC 60.033 60.000 0.00 0.00 34.44 3.71
465 466 0.639392 ATCCTCCAGGCAGTAGTCCT 59.361 55.000 0.00 0.00 34.44 3.85
466 467 1.501582 AATCCTCCAGGCAGTAGTCC 58.498 55.000 0.00 0.00 34.44 3.85
467 468 2.420687 CCAAATCCTCCAGGCAGTAGTC 60.421 54.545 0.00 0.00 34.44 2.59
468 469 1.561542 CCAAATCCTCCAGGCAGTAGT 59.438 52.381 0.00 0.00 34.44 2.73
469 470 1.133976 CCCAAATCCTCCAGGCAGTAG 60.134 57.143 0.00 0.00 34.44 2.57
470 471 0.918983 CCCAAATCCTCCAGGCAGTA 59.081 55.000 0.00 0.00 34.44 2.74
471 472 1.693640 CCCAAATCCTCCAGGCAGT 59.306 57.895 0.00 0.00 34.44 4.40
472 473 1.755783 GCCCAAATCCTCCAGGCAG 60.756 63.158 0.00 0.00 43.32 4.85
473 474 2.360191 GCCCAAATCCTCCAGGCA 59.640 61.111 0.00 0.00 43.32 4.75
474 475 1.305213 TTGCCCAAATCCTCCAGGC 60.305 57.895 0.00 0.00 44.13 4.85
475 476 1.325476 GCTTGCCCAAATCCTCCAGG 61.325 60.000 0.00 0.00 0.00 4.45
476 477 0.612732 TGCTTGCCCAAATCCTCCAG 60.613 55.000 0.00 0.00 0.00 3.86
477 478 0.612732 CTGCTTGCCCAAATCCTCCA 60.613 55.000 0.00 0.00 0.00 3.86
478 479 1.953231 GCTGCTTGCCCAAATCCTCC 61.953 60.000 0.00 0.00 35.15 4.30
479 480 1.514553 GCTGCTTGCCCAAATCCTC 59.485 57.895 0.00 0.00 35.15 3.71
480 481 2.345760 CGCTGCTTGCCCAAATCCT 61.346 57.895 0.00 0.00 38.78 3.24
481 482 2.182537 CGCTGCTTGCCCAAATCC 59.817 61.111 0.00 0.00 38.78 3.01
482 483 2.182537 CCGCTGCTTGCCCAAATC 59.817 61.111 0.00 0.00 38.78 2.17
483 484 2.283101 TCCGCTGCTTGCCCAAAT 60.283 55.556 0.00 0.00 38.78 2.32
484 485 2.985282 CTCCGCTGCTTGCCCAAA 60.985 61.111 0.00 0.00 38.78 3.28
487 488 4.496336 ATCCTCCGCTGCTTGCCC 62.496 66.667 0.00 0.00 38.78 5.36
488 489 2.439156 AATCCTCCGCTGCTTGCC 60.439 61.111 0.00 0.00 38.78 4.52
489 490 2.817423 CGAATCCTCCGCTGCTTGC 61.817 63.158 0.00 0.00 38.57 4.01
490 491 3.403277 CGAATCCTCCGCTGCTTG 58.597 61.111 0.00 0.00 0.00 4.01
498 499 2.354773 CTACGCGGCGAATCCTCC 60.355 66.667 30.94 0.00 0.00 4.30
499 500 3.030882 GCTACGCGGCGAATCCTC 61.031 66.667 30.94 7.64 0.00 3.71
517 518 2.588877 CCACGATGCCGGTGATCC 60.589 66.667 1.90 0.00 40.78 3.36
518 519 1.883084 GACCACGATGCCGGTGATC 60.883 63.158 1.90 4.31 40.78 2.92
519 520 2.186903 GACCACGATGCCGGTGAT 59.813 61.111 1.90 0.00 40.78 3.06
520 521 4.077184 GGACCACGATGCCGGTGA 62.077 66.667 1.90 0.00 40.78 4.02
613 614 1.991813 TCCCATTTGGTGAGATGTCCA 59.008 47.619 0.00 0.00 34.77 4.02
648 649 1.683917 ACAGACGGATACAGGCTCATC 59.316 52.381 0.00 0.00 0.00 2.92
650 651 1.103803 GACAGACGGATACAGGCTCA 58.896 55.000 0.00 0.00 0.00 4.26
651 652 0.386113 GGACAGACGGATACAGGCTC 59.614 60.000 0.00 0.00 0.00 4.70
653 654 1.065928 CGGACAGACGGATACAGGC 59.934 63.158 0.00 0.00 0.00 4.85
654 655 1.065928 GCGGACAGACGGATACAGG 59.934 63.158 0.00 0.00 0.00 4.00
656 657 2.420568 GGGCGGACAGACGGATACA 61.421 63.158 0.00 0.00 0.00 2.29
657 658 2.416260 GGGCGGACAGACGGATAC 59.584 66.667 0.00 0.00 0.00 2.24
682 692 1.707106 TGAGTAGGGAACACGGACAA 58.293 50.000 0.00 0.00 0.00 3.18
730 758 1.302192 CGGTGACCCAAATGGACGT 60.302 57.895 0.00 0.00 37.39 4.34
736 764 0.036306 GTCCTGACGGTGACCCAAAT 59.964 55.000 0.00 0.00 0.00 2.32
762 797 0.109532 TTGCAAATGTCCGGACCAGA 59.890 50.000 31.19 14.09 0.00 3.86
783 818 4.036380 CGTGCTTTGTTTAGGGAGAAAACT 59.964 41.667 0.00 0.00 37.64 2.66
865 900 5.030936 GGTCGAAATAAAAGAGCATTGAGC 58.969 41.667 0.00 0.00 46.19 4.26
869 938 5.975693 TTGGGTCGAAATAAAAGAGCATT 57.024 34.783 0.00 0.00 34.43 3.56
872 941 4.398044 TGGATTGGGTCGAAATAAAAGAGC 59.602 41.667 0.00 0.00 0.00 4.09
887 956 2.176364 AGTTGGATGGATCTGGATTGGG 59.824 50.000 0.00 0.00 0.00 4.12
896 965 8.807118 TGATCATTAGTAGTAGTTGGATGGATC 58.193 37.037 0.00 0.00 0.00 3.36
937 1011 4.771577 TCCGTACAGTGTTTGGTTCCTATA 59.228 41.667 0.00 0.00 0.00 1.31
969 1049 3.589951 AGGATTCTGATTGGTGATGGG 57.410 47.619 0.00 0.00 0.00 4.00
984 1064 2.501316 GGCCATGGCTTTTGTTAGGATT 59.499 45.455 34.70 0.00 41.60 3.01
985 1065 2.110578 GGCCATGGCTTTTGTTAGGAT 58.889 47.619 34.70 0.00 41.60 3.24
1128 1234 2.584391 GGCGTGGAAGAGGGTGACT 61.584 63.158 0.00 0.00 0.00 3.41
1566 1736 4.468095 AAAAGTTGCAGTACTACTTGCG 57.532 40.909 9.71 0.00 42.46 4.85
1601 1771 7.024171 GCATTCTCAAGGCTAAAGTTTTACTC 58.976 38.462 0.00 0.00 34.89 2.59
1745 2413 8.559536 CGCATGGATATAAATGGGTGTATTATC 58.440 37.037 0.00 0.00 33.39 1.75
2048 2724 3.071479 TCGTAGGAAATTTCAGGCACAC 58.929 45.455 19.49 6.72 0.00 3.82
2077 2753 8.948853 ATGTTGTAACTATTCAAAACACATCG 57.051 30.769 0.00 0.00 30.99 3.84
2108 2784 4.272489 TCCAGCTCCATAAAAATGTCCAG 58.728 43.478 0.00 0.00 0.00 3.86
2261 2940 2.035632 CACACCTTAAAAACTGGGCCA 58.964 47.619 5.85 5.85 0.00 5.36
2383 3063 4.097135 TCAGCTGGTTTTCGAAAATGTTCA 59.903 37.500 24.93 18.23 32.89 3.18
2484 3165 5.643379 TCTGATGGGTCATAAAAAGTTGC 57.357 39.130 0.00 0.00 32.98 4.17
2540 3221 9.817809 TCTATTAATGCACTAAGAAACTCGAAT 57.182 29.630 0.00 0.00 0.00 3.34
2541 3222 9.647797 TTCTATTAATGCACTAAGAAACTCGAA 57.352 29.630 0.00 0.00 0.00 3.71
2595 3276 8.283699 AGTCTGTTCTAGAGGTGTATCTTAAC 57.716 38.462 0.00 0.00 35.70 2.01
2785 3743 6.110707 CCCTTAATTAGTTACTCCGCAAGAA 58.889 40.000 0.00 0.00 43.02 2.52
2888 3846 1.609208 GTGAGCCCAAAGTGTGACAT 58.391 50.000 0.00 0.00 0.00 3.06
2890 3848 2.331265 GGTGAGCCCAAAGTGTGAC 58.669 57.895 0.00 0.00 0.00 3.67
2904 3862 0.675083 TACTGAAAACGCGAGGGTGA 59.325 50.000 15.93 0.00 0.00 4.02
2923 3881 2.205911 CCCAAAAACGCGTGGAAAAAT 58.794 42.857 14.98 0.00 37.03 1.82
3033 3993 3.751698 GGCTATGGTTCTCACGAAAAAGT 59.248 43.478 0.00 0.00 0.00 2.66
3207 4181 3.201726 ACGAAATTCAGCGTGGATTTG 57.798 42.857 8.42 5.12 39.56 2.32
3231 4205 7.523293 TCAAGAGCTATTGAAATGTCCAAAA 57.477 32.000 20.99 0.00 36.28 2.44
3293 4268 1.007849 GGTCAAACGGTGCGCAAAT 60.008 52.632 14.00 0.00 0.00 2.32
3701 4689 9.927668 AATAATTTTCATTGTTGGATTTCTCGT 57.072 25.926 0.00 0.00 0.00 4.18
3724 4712 3.268334 ACCATGTGTCCAAAGCCCTAATA 59.732 43.478 0.00 0.00 0.00 0.98
3725 4713 2.042979 ACCATGTGTCCAAAGCCCTAAT 59.957 45.455 0.00 0.00 0.00 1.73
3794 4785 1.461127 CACTTGTCGCAAACTAGGAGC 59.539 52.381 0.00 0.00 35.34 4.70
3839 4830 1.902508 CTCCCACCTTCTCTGTTGCTA 59.097 52.381 0.00 0.00 0.00 3.49
3879 4870 7.577303 AGAGCCATGAAATCACTAATTAAGGA 58.423 34.615 0.00 0.00 0.00 3.36
4021 5012 3.309954 GTGCTTCCGCTACCTTTGATTAG 59.690 47.826 0.00 0.00 36.97 1.73
4022 5013 3.267483 GTGCTTCCGCTACCTTTGATTA 58.733 45.455 0.00 0.00 36.97 1.75
4055 5047 7.119553 GCATTGGATTCTTATTTGAGGCAAAAA 59.880 33.333 0.00 0.00 36.90 1.94
4161 5154 3.317711 TGGTAGTTGTTGCAATGAACCTG 59.682 43.478 16.55 0.00 0.00 4.00
4162 5155 3.317993 GTGGTAGTTGTTGCAATGAACCT 59.682 43.478 16.55 9.51 0.00 3.50
4168 5161 4.458989 CACTATGGTGGTAGTTGTTGCAAT 59.541 41.667 0.59 0.00 39.59 3.56
4358 5356 7.102847 ACCGAGTTTCAAAATTTTGGACTTA 57.897 32.000 26.80 11.71 38.66 2.24
4708 5810 1.826720 ACGTAGTCCCTTTTATGGCGA 59.173 47.619 0.00 0.00 29.74 5.54
4721 5823 1.989165 CTGCAAAGAGCTCACGTAGTC 59.011 52.381 17.77 0.00 42.34 2.59
4726 5828 1.802960 ACATTCTGCAAAGAGCTCACG 59.197 47.619 17.77 4.51 45.94 4.35
4786 5889 9.851686 ATGGTCATTTTCTGTAATTAGCTATCA 57.148 29.630 0.00 0.00 0.00 2.15
4818 5921 7.492352 AGTTGTCCTTACTTTGTGTGATTAC 57.508 36.000 0.00 0.00 0.00 1.89
4973 6078 5.567037 AGCATAGGATATGTTGCCACTAA 57.433 39.130 0.00 0.00 35.71 2.24
5016 6132 6.547880 TCAGTGGACTTTTTGGTTTTAGCATA 59.452 34.615 0.00 0.00 0.00 3.14
5068 6184 1.229428 CTCGTTCTTGGAGCTTGCAA 58.771 50.000 0.00 0.00 0.00 4.08
5127 6243 0.455633 GGCGACTCTTTTGCATGCAG 60.456 55.000 21.50 11.44 36.11 4.41
5341 6459 9.787435 CTCTATACTCTTACCATGAGTCTTACT 57.213 37.037 0.00 0.00 42.95 2.24
5365 6483 4.208632 CGCAAGTCACCCCATCTC 57.791 61.111 0.00 0.00 0.00 2.75
5382 6500 9.118236 CTTTGATTTTTCTTCGTCCATCTTAAC 57.882 33.333 0.00 0.00 0.00 2.01
5467 6585 6.837471 TGTGTGTGGTAGTGTACATATGTA 57.163 37.500 11.62 11.62 0.00 2.29
5601 6726 8.658609 CGCATGATCTGAAAATTTGGTAAAAAT 58.341 29.630 0.00 0.00 0.00 1.82
5883 7009 6.959639 ACAAGTTTTGTCTGTATCCAACAT 57.040 33.333 0.00 0.00 40.56 2.71
5892 7018 5.351189 GCCAATTCAAACAAGTTTTGTCTGT 59.649 36.000 0.00 0.00 44.59 3.41
5988 7114 1.622607 CCCCATGCGGTCTCCACTAA 61.623 60.000 0.00 0.00 0.00 2.24
6024 7150 4.222588 CCTAATCACCCAAAGAAATGGCAA 59.777 41.667 0.00 0.00 39.26 4.52
6477 7603 9.736023 GGAACAAGGTAATGACATCATAAAATC 57.264 33.333 0.00 0.00 35.10 2.17
6542 7668 6.635030 AACAACATTCTAAGTTTCAGGGAC 57.365 37.500 0.00 0.00 0.00 4.46
6544 7670 6.348213 CGGTAACAACATTCTAAGTTTCAGGG 60.348 42.308 0.00 0.00 0.00 4.45
6605 7731 8.932434 TTGGCAGAAATGTATTAGGCAATATA 57.068 30.769 0.00 0.00 36.76 0.86
6631 7759 6.461509 GGGTGCGAAATGAAATTATGAGGAAT 60.462 38.462 0.00 0.00 33.67 3.01
6731 7859 2.411748 CGCGCAGTTTGACTTGAGATAA 59.588 45.455 8.75 0.00 0.00 1.75
6732 7860 1.992667 CGCGCAGTTTGACTTGAGATA 59.007 47.619 8.75 0.00 0.00 1.98
6749 7877 9.061610 AGTTATTGATAATTTTTCAACTTCGCG 57.938 29.630 0.00 0.00 36.02 5.87
6919 8057 3.568007 TCCGGTTGCCAGATATTAAATGC 59.432 43.478 0.00 0.00 0.00 3.56
7036 8174 7.902917 TCGATAAACATTTTATTTCACTCGCTG 59.097 33.333 0.00 0.00 0.00 5.18
7059 8197 7.559486 TCCTAGTGTATACTCAACTAACTCGA 58.441 38.462 4.17 0.00 38.36 4.04
7088 8226 6.136155 TGTCACCTCTCCATCTAATATGACA 58.864 40.000 0.00 0.00 41.04 3.58
7396 8539 4.902443 TTGTCTTTTTGTGGTTCGCATA 57.098 36.364 0.00 0.00 0.00 3.14
7397 8540 3.791973 TTGTCTTTTTGTGGTTCGCAT 57.208 38.095 0.00 0.00 0.00 4.73
7400 8543 6.255453 ACATGATTTTGTCTTTTTGTGGTTCG 59.745 34.615 0.00 0.00 0.00 3.95
7482 8625 7.548780 TCATGAAATGTGTTTCGATGTGATCTA 59.451 33.333 0.00 0.00 46.80 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.